AlfalfaGEDB | MsG0080048980.01

M. sativa cultivar ZhongmuNo.1 / MsG0080048980.01

KEGG: K14488
GO: GO:0009733
PFAM: PF02519

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048980.01.T01	XP_003603566.1	98.83	171	2	0	1	171	1	171	2.00E-122	352

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048980.01.T01	Q9LTV3	33.913	115	72	2	16	130	1	111	2.65E-17	77

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048980.01.T01	G7J2U8	98.830	171	2	0	1	171	1	171	9.55e-123	352

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048889.01	MsG0080048980.01	0.822318	2.525438e-53	2.106616e-50
MsG0080048980.01	MsG0180000367.01	0.804854	1.769090e-49	9.220444e-47
MsG0080048980.01	MsG0180001513.01	0.817114	3.899428e-52	2.814650e-49
MsG0080048980.01	MsG0180003484.01	0.806135	9.526965e-50	5.131252e-47
MsG0080048980.01	MsG0180005417.01	0.808142	3.581422e-50	2.031953e-47
MsG0080048980.01	MsG0280006559.01	0.813222	2.854511e-51	1.853075e-48
MsG0080048980.01	MsG0280006883.01	0.800790	1.221564e-48	5.738715e-46
MsG0080048980.01	MsG0280007786.01	0.817940	2.540764e-52	1.875924e-49
MsG0080048980.01	MsG0280009167.01	0.802233	6.183134e-49	3.013012e-46
MsG0080048980.01	MsG0280009742.01	-0.808420	3.123879e-50	1.785365e-47
MsG0080048980.01	MsG0280010410.01	0.815658	8.257436e-52	5.727776e-49
MsG0080048980.01	MsG0280010936.01	0.813469	2.519136e-51	1.646597e-48
MsG0080048980.01	MsG0280011236.01	0.831247	1.860316e-55	2.007132e-52
MsG0080048980.01	MsG0280011238.01	0.826741	2.296898e-54	2.172696e-51
MsG0080048980.01	MsG0280011267.01	0.808306	3.304912e-50	1.883152e-47
MsG0080048980.01	MsG0280011269.01	0.801300	9.608761e-49	4.572922e-46
MsG0080048980.01	MsG0380011968.01	0.804351	2.252362e-49	1.158725e-46
MsG0080048980.01	MsG0380011974.01	0.825343	4.937520e-54	4.488278e-51
MsG0080048980.01	MsG0380012889.01	0.815330	9.769673e-52	6.715849e-49
MsG0080048980.01	MsG0380012896.01	0.808758	2.645865e-50	1.525520e-47
MsG0080048980.01	MsG0380013272.01	0.822750	2.004387e-53	1.692741e-50
MsG0080048980.01	MsG0380014735.01	-0.801182	1.016002e-48	4.820824e-46
MsG0080048980.01	MsG0380015660.01	0.820336	7.237899e-53	5.710734e-50
MsG0080048980.01	MsG0380015711.01	0.802559	5.298156e-49	2.603166e-46
MsG0080048980.01	MsG0380016476.01	0.801047	1.082773e-48	5.120461e-46
MsG0080048980.01	MsG0380016935.01	-0.805542	1.269285e-49	6.732954e-47
MsG0080048980.01	MsG0380017405.01	-0.807662	4.531040e-50	2.538354e-47
MsG0080048980.01	MsG0380017565.01	0.854393	1.268135e-61	2.827834e-58
MsG0080048980.01	MsG0480018563.01	0.816361	5.753565e-52	4.068365e-49
MsG0080048980.01	MsG0480019146.01	0.812657	3.797272e-51	2.428296e-48
MsG0080048980.01	MsG0480019666.01	0.807965	3.905773e-50	2.205518e-47
MsG0080048980.01	MsG0480021133.01	0.802575	5.256070e-49	2.583666e-46
MsG0080048980.01	MsG0480021396.01	0.817485	3.218070e-52	2.346658e-49
MsG0080048980.01	MsG0480021433.01	0.804736	1.872332e-49	9.729026e-47
MsG0080048980.01	MsG0480022428.01	0.854113	1.527656e-61	3.376025e-58
MsG0080048980.01	MsG0480022833.01	0.822968	1.783038e-53	1.515037e-50
MsG0080048980.01	MsG0580024218.01	0.832701	8.135935e-56	9.165350e-53
MsG0080048980.01	MsG0580024219.01	0.807390	5.175342e-50	2.879017e-47
MsG0080048980.01	MsG0580024220.01	0.802388	5.744721e-49	2.810635e-46
MsG0080048980.01	MsG0580025023.01	0.803971	2.702485e-49	1.376811e-46
MsG0080048980.01	MsG0580025431.01	0.818200	2.219042e-52	1.650159e-49
MsG0080048980.01	MsG0580025486.01	-0.800784	1.225201e-48	5.754905e-46
MsG0080048980.01	MsG0580025507.01	0.803134	4.029990e-49	2.009344e-46
MsG0080048980.01	MsG0580027638.01	0.812775	3.578071e-51	2.295148e-48
MsG0080048980.01	MsG0580029296.01	0.801076	1.068037e-48	5.054385e-46
MsG0080048980.01	MsG0680030635.01	-0.822109	2.823411e-53	2.341060e-50
MsG0080048980.01	MsG0680030960.01	0.807701	4.444194e-50	2.492317e-47
MsG0080048980.01	MsG0680031009.01	0.815424	9.309401e-52	6.416013e-49
MsG0080048980.01	MsG0680031841.01	0.806471	8.095235e-50	4.397649e-47
MsG0080048980.01	MsG0680035584.01	-0.801650	8.144711e-49	3.910423e-46
MsG0080048980.01	MsG0780035953.01	0.805229	1.476310e-49	7.768565e-47
MsG0080048980.01	MsG0780036839.01	0.819637	1.046140e-52	8.094978e-50
MsG0080048980.01	MsG0780037182.01	0.805696	1.178327e-49	6.275912e-47
MsG0080048980.01	MsG0780037813.01	0.819298	1.250169e-52	9.582215e-50
MsG0080048980.01	MsG0780038305.01	0.819811	9.548552e-53	7.425054e-50
MsG0080048980.01	MsG0780038307.01	0.812912	3.339686e-51	2.150039e-48
MsG0080048980.01	MsG0780038519.01	0.807554	4.776228e-50	2.668262e-47
MsG0080048980.01	MsG0780039576.01	0.804660	1.941469e-49	1.006783e-46
MsG0080048980.01	MsG0780039925.01	0.810308	1.229843e-50	7.387610e-48
MsG0080048980.01	MsG0780039979.01	0.823346	1.455096e-53	1.249559e-50
MsG0080048980.01	MsG0780040498.01	0.813792	2.139057e-51	1.410371e-48
MsG0080048980.01	MsG0780040977.01	0.820870	5.457082e-53	4.370338e-50
MsG0080048980.01	MsG0780041036.01	0.825955	3.534115e-54	3.269188e-51
MsG0080048980.01	MsG0780041180.01	0.815065	1.118773e-51	7.634952e-49
MsG0080048980.01	MsG0880042122.01	0.815633	8.364096e-52	5.798015e-49
MsG0080048980.01	MsG0880042740.01	0.803733	3.027168e-49	1.532833e-46
MsG0080048980.01	MsG0880043017.01	0.812806	3.522791e-51	2.261457e-48
MsG0080048980.01	MsG0880043481.01	0.825587	4.322310e-54	3.956446e-51
MsG0080048980.01	MsG0880043607.01	0.819116	1.374864e-52	1.048606e-49
MsG0080048980.01	MsG0880045385.01	-0.800859	1.182665e-48	5.566152e-46
MsG0080048980.01	MsG0880046271.01	0.812779	3.571130e-51	2.290938e-48
MsG0080048980.01	MsG0880046273.01	0.809641	1.711308e-50	1.010276e-47
MsG0080048980.01	MsG0880047500.01	0.801227	9.944330e-49	4.723875e-46
MsG0080048980.01	MsG0880047714.01	0.831283	1.821950e-55	1.967971e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048980.01.T01	MTR_3g109160	98.830	171	2	0	1	171	1	171	2.42e-126	352
MsG0080048980.01.T01	MTR_1g009150	69.492	177	41	5	5	171	6	179	4.75e-79	233
MsG0080048980.01.T01	MTR_4g005320	60.294	136	46	2	5	135	4	136	9.27e-45	145
MsG0080048980.01.T01	MTR_4g021810	70.297	101	23	3	48	141	1	101	1.38e-40	132
MsG0080048980.01.T01	MTR_2g043960	43.609	133	70	2	10	137	12	144	6.76e-30	107
MsG0080048980.01.T01	MTR_1g024085	34.615	156	64	3	6	153	4	129	5.75e-23	89.4
MsG0080048980.01.T01	MTR_4g124750	38.710	124	71	2	14	133	11	133	1.09e-22	89.0
MsG0080048980.01.T01	MTR_4g072160	36.567	134	49	2	8	140	11	109	3.91e-18	76.6
MsG0080048980.01.T01	MTR_2g066830	33.613	119	75	1	16	130	1	119	3.62e-17	74.3
MsG0080048980.01.T01	MTR_4g072570	46.250	80	42	1	56	134	12	91	2.80e-16	70.5
MsG0080048980.01.T01	MTR_4g072190	41.667	84	46	1	49	132	19	99	6.68e-16	69.7
MsG0080048980.01.T01	MTR_7g405740	32.576	132	85	2	15	146	15	142	6.69e-16	71.2
MsG0080048980.01.T01	MTR_4g072910	53.165	79	35	2	51	128	18	95	9.85e-16	69.3
MsG0080048980.01.T01	MTR_3g084240	53.731	67	30	1	69	134	25	91	1.06e-15	68.9
MsG0080048980.01.T01	MTR_3g084170	53.731	67	30	1	69	134	25	91	1.32e-15	68.6
MsG0080048980.01.T01	MTR_3g098970	30.488	164	90	5	10	167	4	149	1.44e-15	70.1
MsG0080048980.01.T01	MTR_4g050700	52.239	67	31	1	69	134	26	92	1.81e-15	68.6
MsG0080048980.01.T01	MTR_2g012410	52.239	67	31	1	69	134	26	92	1.81e-15	68.6
MsG0080048980.01.T01	MTR_3g117610	46.875	64	34	0	69	132	45	108	3.23e-15	68.2
MsG0080048980.01.T01	MTR_4g072370	54.098	61	27	1	69	128	23	83	5.98e-15	67.0
MsG0080048980.01.T01	MTR_8g461210	46.970	66	35	0	67	132	33	98	6.44e-15	67.8
MsG0080048980.01.T01	MTR_3g113310	39.326	89	49	1	49	132	17	105	6.49e-15	67.4
MsG0080048980.01.T01	MTR_4g072330	54.098	61	27	1	69	128	23	83	6.87e-15	66.6
MsG0080048980.01.T01	MTR_3g084150	44.706	85	45	2	51	134	8	91	7.79e-15	66.6
MsG0080048980.01.T01	MTR_4g072880	49.254	67	33	1	69	134	26	92	7.90e-15	66.6
MsG0080048980.01.T01	MTR_3g084180	44.706	85	45	2	51	134	8	91	9.04e-15	66.6
MsG0080048980.01.T01	MTR_3g092220	38.000	100	56	2	36	133	4	99	1.13e-14	67.0
MsG0080048980.01.T01	MTR_5g021820	40.230	87	49	1	49	132	17	103	1.20e-14	66.6
MsG0080048980.01.T01	MTR_4g072240	44.304	79	43	1	51	128	8	86	1.55e-14	65.9
MsG0080048980.01.T01	MTR_4g072640	45.455	77	41	1	53	128	9	85	1.66e-14	65.9
MsG0080048980.01.T01	MTR_8g026730	44.118	68	36	1	68	133	26	93	1.67e-14	66.2
MsG0080048980.01.T01	MTR_4g072690	53.226	62	28	1	68	128	19	80	2.09e-14	65.5
MsG0080048980.01.T01	MTR_8g461410	49.254	67	33	1	69	134	25	91	2.63e-14	65.5
MsG0080048980.01.T01	MTR_3g110042	55.738	61	26	1	69	128	25	85	2.71e-14	65.5
MsG0080048980.01.T01	MTR_4g072480	43.750	80	44	1	56	134	12	91	3.08e-14	65.1
MsG0080048980.01.T01	MTR_4g072740	46.753	77	40	1	53	128	4	80	3.27e-14	64.7
MsG0080048980.01.T01	MTR_5g008370	41.758	91	49	2	48	134	1	91	3.37e-14	66.2
MsG0080048980.01.T01	MTR_4g072870	47.368	76	38	2	51	125	9	83	3.49e-14	65.1
MsG0080048980.01.T01	MTR_1g059770	42.029	69	40	0	65	133	45	113	4.28e-14	65.9
MsG0080048980.01.T01	MTR_4g072220	45.122	82	44	1	48	128	5	86	4.40e-14	64.7
MsG0080048980.01.T01	MTR_4g072660	50.746	67	32	1	69	134	20	86	4.68e-14	64.7
MsG0080048980.01.T01	MTR_8g101520	32.540	126	65	2	5	130	6	111	4.72e-14	66.2
MsG0080048980.01.T01	MTR_3g084220	50.746	67	32	1	69	134	25	91	4.87e-14	64.7
MsG0080048980.01.T01	MTR_4g072680	42.500	80	45	1	56	134	12	91	6.16e-14	64.3
MsG0080048980.01.T01	MTR_4g072460	42.500	80	45	1	56	134	12	91	6.29e-14	64.3
MsG0080048980.01.T01	MTR_4g072470	44.156	77	42	1	53	128	4	80	7.91e-14	63.9
MsG0080048980.01.T01	MTR_4g072270	42.169	83	47	1	53	134	10	92	8.15e-14	63.9
MsG0080048980.01.T01	MTR_4g072610	54.098	61	27	1	69	128	19	79	8.29e-14	63.9
MsG0080048980.01.T01	MTR_4g072500	42.169	83	47	1	53	134	9	91	8.57e-14	63.9
MsG0080048980.01.T01	MTR_4g072300	42.683	82	46	1	48	128	5	86	9.10e-14	63.9
MsG0080048980.01.T01	MTR_4g072940	54.098	61	27	1	69	128	57	117	1.07e-13	64.7
MsG0080048980.01.T01	MTR_7g118010	47.059	68	34	1	68	133	22	89	1.07e-13	63.9
MsG0080048980.01.T01	MTR_4g072260	46.053	76	40	1	51	125	8	83	1.09e-13	63.9
MsG0080048980.01.T01	MTR_4g072620	42.500	80	45	1	56	134	12	91	1.12e-13	63.5
MsG0080048980.01.T01	MTR_4g072650	52.459	61	28	1	69	128	19	79	1.27e-13	63.5
MsG0080048980.01.T01	MTR_3g084250	55.172	58	25	1	69	125	25	82	1.33e-13	63.5
MsG0080048980.01.T01	MTR_3g110038	54.098	61	27	1	69	128	25	85	1.47e-13	63.5
MsG0080048980.01.T01	MTR_4g072730	47.761	67	34	1	69	134	25	91	1.82e-13	63.2
MsG0080048980.01.T01	MTR_4g072890	47.887	71	36	1	51	120	8	78	1.92e-13	63.2
MsG0080048980.01.T01	MTR_3g110032	43.373	83	46	1	53	134	10	92	2.63e-13	62.8
MsG0080048980.01.T01	MTR_7g104940	45.161	62	34	0	72	133	53	114	3.40e-13	63.5
MsG0080048980.01.T01	MTR_4g072720	52.459	61	28	1	69	128	21	81	4.14e-13	62.0
MsG0080048980.01.T01	MTR_4g072530	42.857	77	43	1	53	128	9	85	4.15e-13	62.0
MsG0080048980.01.T01	MTR_4g072310	42.169	83	47	1	53	134	10	92	4.28e-13	62.4
MsG0080048980.01.T01	MTR_8g076040	36.782	87	52	1	49	132	18	104	4.35e-13	62.4
MsG0080048980.01.T01	MTR_1g061570	46.970	66	35	0	69	134	19	84	4.74e-13	62.8
MsG0080048980.01.T01	MTR_4g072490	42.857	77	43	1	53	128	4	80	4.78e-13	62.0
MsG0080048980.01.T01	MTR_8g101530	45.714	70	38	0	67	136	38	107	4.89e-13	63.5
MsG0080048980.01.T01	MTR_4g072820	51.667	60	28	1	67	125	18	77	5.81e-13	61.6
MsG0080048980.01.T01	MTR_3g084260	53.448	58	26	1	69	125	26	83	6.55e-13	61.6
MsG0080048980.01.T01	MTR_4g072630	50.000	62	30	1	69	129	21	82	7.50e-13	61.2
MsG0080048980.01.T01	MTR_4g072510	50.820	61	29	1	69	128	21	81	9.57e-13	61.2
MsG0080048980.01.T01	MTR_7g104950	43.548	62	35	0	72	133	53	114	1.05e-12	62.0
MsG0080048980.01.T01	MTR_3g117630	54.098	61	27	1	69	128	25	85	1.12e-12	61.2
MsG0080048980.01.T01	MTR_4g072540	50.820	61	29	1	69	128	21	81	1.75e-12	60.5
MsG0080048980.01.T01	MTR_4g072450	50.000	62	30	1	68	128	19	80	1.88e-12	60.5
MsG0080048980.01.T01	MTR_4g072465	50.820	61	29	1	69	128	21	81	3.38e-12	59.7
MsG0080048980.01.T01	MTR_4g072850	52.459	61	28	1	69	128	27	87	3.51e-12	59.7
MsG0080048980.01.T01	MTR_4g072670	50.820	61	29	1	69	128	21	81	4.18e-12	59.3
MsG0080048980.01.T01	MTR_4g072580	49.180	61	30	1	69	128	20	80	4.29e-12	59.3
MsG0080048980.01.T01	MTR_4g072590	50.000	58	28	1	69	125	20	77	4.84e-12	59.3
MsG0080048980.01.T01	MTR_4g025830	42.105	76	40	2	65	136	75	150	5.12e-12	61.2
MsG0080048980.01.T01	MTR_4g072830	43.590	78	33	2	69	145	23	90	6.01e-12	59.3
MsG0080048980.01.T01	MTR_3g084200	59.091	44	18	0	69	112	25	68	8.31e-12	59.3
MsG0080048980.01.T01	MTR_4g072230	52.459	61	26	2	69	128	26	84	1.07e-11	58.5
MsG0080048980.01.T01	MTR_3g110045	53.448	58	26	1	69	125	84	141	1.35e-11	59.7
MsG0080048980.01.T01	MTR_0388s0020	35.052	97	58	2	44	137	52	146	1.40e-11	59.7
MsG0080048980.01.T01	MTR_4g072860	49.254	67	33	1	69	134	26	92	1.41e-11	58.2
MsG0080048980.01.T01	MTR_4g072600	50.820	61	29	1	69	128	20	80	1.77e-11	57.8
MsG0080048980.01.T01	MTR_5g008360	40.741	81	47	1	55	134	2	82	2.21e-11	57.4
MsG0080048980.01.T01	MTR_6g077850	38.554	83	48	2	52	133	19	99	2.68e-11	57.8
MsG0080048980.01.T01	MTR_4g005310	38.824	85	45	2	52	129	40	124	3.13e-11	58.9
MsG0080048980.01.T01	MTR_4g072280	50.000	60	30	0	51	110	8	67	3.23e-11	57.0
MsG0080048980.01.T01	MTR_7g101920	42.105	76	42	1	57	130	23	98	3.65e-11	57.8
MsG0080048980.01.T01	MTR_1g094750	50.820	61	30	0	69	129	50	110	3.66e-11	57.8
MsG0080048980.01.T01	MTR_3g084210	46.269	67	35	1	69	134	25	91	4.05e-11	57.0
MsG0080048980.01.T01	MTR_8g461420	51.724	58	27	1	69	125	25	82	4.27e-11	57.0
MsG0080048980.01.T01	MTR_5g008350	51.923	52	24	1	70	120	21	72	4.54e-11	56.6
MsG0080048980.01.T01	MTR_4g072770	45.588	68	36	1	67	133	13	80	6.72e-11	56.2
MsG0080048980.01.T01	MTR_3g084190	50.000	58	28	1	69	125	25	82	9.32e-11	56.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048980.01.T01	AT4G31320	53.646	192	58	5	5	171	4	189	1.20e-56	176
MsG0080048980.01.T01	AT2G24400	54.011	187	54	6	5	171	4	178	7.99e-56	174
MsG0080048980.01.T01	AT3G43120	40.288	139	75	1	10	140	12	150	2.14e-29	106
MsG0080048980.01.T01	AT5G20810	44.697	132	65	3	10	133	12	143	1.58e-27	102
MsG0080048980.01.T01	AT5G20810	44.697	132	65	3	10	133	12	143	1.59e-27	101
MsG0080048980.01.T01	AT1G19840	37.795	127	50	1	6	132	7	104	5.12e-20	82.0
MsG0080048980.01.T01	AT5G10990	36.567	134	56	1	6	139	7	111	4.10e-19	79.3
MsG0080048980.01.T01	AT4G34750	36.220	127	52	2	6	132	3	100	1.20e-18	78.2
MsG0080048980.01.T01	AT4G34750	36.220	127	52	2	6	132	3	100	1.20e-18	78.2
MsG0080048980.01.T01	AT3G12830	33.913	115	72	2	16	130	1	111	2.70e-18	77.0
MsG0080048980.01.T01	AT1G56150	33.913	115	60	1	16	130	1	99	1.28e-17	74.3
MsG0080048980.01.T01	AT1G79130	35.593	118	64	2	16	130	1	109	2.28e-17	74.3
MsG0080048980.01.T01	AT1G75590	37.795	127	51	2	6	132	7	105	3.59e-17	74.7
MsG0080048980.01.T01	AT4G34760	39.326	89	49	1	49	132	18	106	4.32e-17	73.2
MsG0080048980.01.T01	AT4G36110	42.268	97	54	2	37	131	6	102	1.03e-16	72.0
MsG0080048980.01.T01	AT3G20220	40.404	99	57	2	32	129	11	108	4.53e-16	70.9
MsG0080048980.01.T01	AT3G61900	52.239	67	29	1	69	132	30	96	5.52e-16	70.9
MsG0080048980.01.T01	AT1G75580	35.156	128	59	3	5	132	4	107	3.46e-15	68.2
MsG0080048980.01.T01	AT2G16580	33.333	120	59	2	19	132	3	107	4.06e-15	67.8
MsG0080048980.01.T01	AT2G21210	48.193	83	35	3	46	125	10	87	9.80e-15	66.6
MsG0080048980.01.T01	AT5G66260	40.000	85	50	1	49	132	13	97	1.04e-14	66.6
MsG0080048980.01.T01	AT2G18010	46.032	63	34	0	69	131	48	110	2.21e-14	66.2
MsG0080048980.01.T01	AT2G21220	40.230	87	49	1	49	132	17	103	2.50e-14	65.9
MsG0080048980.01.T01	AT4G38860	39.806	103	56	3	34	132	4	104	2.65e-14	65.9
MsG0080048980.01.T01	AT2G21210	42.308	104	48	5	33	125	52	154	3.70e-14	67.0
MsG0080048980.01.T01	AT2G46690	42.857	70	37	1	69	135	24	93	8.89e-14	64.7
MsG0080048980.01.T01	AT1G19830	31.967	122	63	2	8	129	7	108	1.03e-13	64.7
MsG0080048980.01.T01	AT4G38840	55.932	59	24	2	69	125	33	91	1.07e-13	63.9
MsG0080048980.01.T01	AT3G60690	42.683	82	40	2	67	145	86	163	1.78e-13	65.1
MsG0080048980.01.T01	AT4G00880	47.887	71	35	1	65	133	24	94	1.99e-13	63.9
MsG0080048980.01.T01	AT4G34770	45.556	90	42	4	51	134	15	103	3.24e-13	62.8
MsG0080048980.01.T01	AT1G16510	30.833	120	77	2	16	132	1	117	5.99e-13	63.2
MsG0080048980.01.T01	AT3G51200	46.154	65	34	1	69	132	39	103	7.08e-12	59.3
MsG0080048980.01.T01	AT4G12410	42.667	75	40	1	65	136	72	146	9.23e-12	60.5
MsG0080048980.01.T01	AT5G53590	41.429	70	36	1	69	133	46	115	1.18e-11	59.7
MsG0080048980.01.T01	AT4G34800	49.231	65	29	2	69	129	21	85	1.19e-11	58.5
MsG0080048980.01.T01	AT3G03850	41.758	91	46	3	51	134	3	93	2.12e-11	57.8
MsG0080048980.01.T01	AT4G22620	43.056	72	38	1	68	136	78	149	3.06e-11	58.9
MsG0080048980.01.T01	AT5G18080	41.463	82	42	3	46	125	5	82	3.31e-11	57.4
MsG0080048980.01.T01	AT4G13790	42.647	68	36	2	68	132	24	91	3.78e-11	57.0
MsG0080048980.01.T01	AT4G38825	42.857	63	34	2	68	128	22	84	3.79e-11	57.0
MsG0080048980.01.T01	AT2G36210	31.200	125	75	4	11	133	4	119	9.26e-11	57.4

Find 34 sgRNAs with CRISPR-Local

Find 37 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTATACCAACTGAGTATT+TGG	0.160089	contig583end:-3270	MsG0080048980.01.T01:CDS
AGAGAAGCTGAAGAAGAATT+TGG	0.168030	contig583end:-3221	MsG0080048980.01.T01:CDS
CTACTCTTCTCCATTTCTTA+AGG	0.303486	contig583end:+3468	None:intergenic
GTGTTGGTGTAGACCTTAAC+AGG	0.314144	contig583end:-3295	MsG0080048980.01.T01:CDS
TCTACTCAGAAATGTAGATT+TGG	0.343922	contig583end:-3110	MsG0080048980.01.T01:CDS
GAGAAGCTGAAGAAGAATTT+GGG	0.377927	contig583end:-3220	MsG0080048980.01.T01:CDS
TTCAACAGATCCTTAAGAAA+TGG	0.395955	contig583end:-3478	MsG0080048980.01.T01:CDS
GAATTTGGGTTTGAACAAAC+TGG	0.403966	contig583end:-3206	MsG0080048980.01.T01:CDS
TGATCCTCCTCCTTCCCGTT+CGG	0.422045	contig583end:+3352	None:intergenic
TTGGTATAACAAACCTGTTA+AGG	0.460530	contig583end:+3282	None:intergenic
ATTTGGCATTGAAAAGATGA+TGG	0.461164	contig583end:-3093	MsG0080048980.01.T01:CDS
ATAATAACCAAGTTGGTTTG+AGG	0.468390	contig583end:+3061	None:intergenic
AACACTTTCAATGTCCGAAC+GGG	0.473602	contig583end:-3366	MsG0080048980.01.T01:CDS
CTTGAAGATGGTTGAAGGAA+AGG	0.483489	contig583end:-3141	MsG0080048980.01.T01:CDS
TACTGTTCCTCAAACCAACT+TGG	0.509698	contig583end:-3068	MsG0080048980.01.T01:CDS
GGCTACCTAGCCGTTTGTGT+TGG	0.517754	contig583end:-3311	MsG0080048980.01.T01:CDS
GTTGATGATAATAACCAAGT+TGG	0.520248	contig583end:+3054	None:intergenic
CAAACGGCTAGGTAGCCTTT+CGG	0.521166	contig583end:+3317	None:intergenic
TATCTGCACATTGGACTATG+AGG	0.522020	contig583end:+3032	None:intergenic
AGTATCTTGAAGATGGTTGA+AGG	0.527345	contig583end:-3146	MsG0080048980.01.T01:CDS
GTTTGAGAGTATCTTGAAGA+TGG	0.543069	contig583end:-3153	MsG0080048980.01.T01:CDS
AAGGTCTACACCAACACAAA+CGG	0.549240	contig583end:+3301	None:intergenic
TTTGGCATTGAAAAGATGAT+GGG	0.560948	contig583end:-3092	MsG0080048980.01.T01:CDS
ATGTCCGAACGGGAAGGAGG+AGG	0.563260	contig583end:-3356	MsG0080048980.01.T01:CDS
TCAAACAACGCGGTTCCGAA+AGG	0.566250	contig583end:-3332	MsG0080048980.01.T01:CDS
TTCTCTGAGTAATATATGAA+AGG	0.569528	contig583end:+3238	None:intergenic
TGATGAGCCAAATACTCAGT+TGG	0.592407	contig583end:+3263	None:intergenic
ATGACAAACTATCTGCACAT+TGG	0.610970	contig583end:+3023	None:intergenic
GAACACTTTCAATGTCCGAA+CGG	0.618386	contig583end:-3367	MsG0080048980.01.T01:CDS
TCAATGTCCGAACGGGAAGG+AGG	0.628171	contig583end:-3359	MsG0080048980.01.T01:CDS
CTACACCAACACAAACGGCT+AGG	0.632675	contig583end:+3306	None:intergenic
CTTTCAATGTCCGAACGGGA+AGG	0.652936	contig583end:-3362	MsG0080048980.01.T01:CDS
TCAAACACTGAAACTTCACA+AGG	0.665855	contig583end:+3170	None:intergenic
AGGAGGAGGATCAAACAACG+CGG	0.824181	contig583end:-3342	MsG0080048980.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTCTCTGAGTAATATATGAA+AGG	+	contig583end:3320-3339	None:intergenic	25.0%
!!	ACAATTTCTCTGATTTTGTT+AGG	+	contig583end:3052-3071	None:intergenic	25.0%
!!!	TCTGTTTGTTTTTGAAGTAT+TGG	+	contig583end:3113-3132	None:intergenic	25.0%
	TCTACTCAGAAATGTAGATT+TGG	-	contig583end:3445-3464	MsG0080048980.01.T01:CDS	30.0%
	TGTTATACCAACTGAGTATT+TGG	-	contig583end:3285-3304	MsG0080048980.01.T01:CDS	30.0%
	TTCAACAGATCCTTAAGAAA+TGG	-	contig583end:3077-3096	MsG0080048980.01.T01:CDS	30.0%
	TTGGTATAACAAACCTGTTA+AGG	+	contig583end:3276-3295	None:intergenic	30.0%
!	ATTTGGCATTGAAAAGATGA+TGG	-	contig583end:3462-3481	MsG0080048980.01.T01:CDS	30.0%
!	ATTTTGTTAGGTTTCTTTGG+TGG	+	contig583end:3040-3059	None:intergenic	30.0%
!	CTGATTTTGTTAGGTTTCTT+TGG	+	contig583end:3043-3062	None:intergenic	30.0%
!	TTTGGCATTGAAAAGATGAT+GGG	-	contig583end:3463-3482	MsG0080048980.01.T01:CDS	30.0%
!!	ATAATAACCAAGTTGGTTTG+AGG	+	contig583end:3497-3516	None:intergenic	30.0%
!!	GTTGATGATAATAACCAAGT+TGG	+	contig583end:3504-3523	None:intergenic	30.0%
	AGAGAAGCTGAAGAAGAATT+TGG	-	contig583end:3334-3353	MsG0080048980.01.T01:CDS	35.0%
	AGTATCTTGAAGATGGTTGA+AGG	-	contig583end:3409-3428	MsG0080048980.01.T01:CDS	35.0%
	CTACTCTTCTCCATTTCTTA+AGG	+	contig583end:3090-3109	None:intergenic	35.0%
	GAGAAGCTGAAGAAGAATTT+GGG	-	contig583end:3335-3354	MsG0080048980.01.T01:CDS	35.0%
	TCAAACACTGAAACTTCACA+AGG	+	contig583end:3388-3407	None:intergenic	35.0%
!	GAATTTGGGTTTGAACAAAC+TGG	-	contig583end:3349-3368	MsG0080048980.01.T01:CDS	35.0%
!!	GTTTGAGAGTATCTTGAAGA+TGG	-	contig583end:3402-3421	MsG0080048980.01.T01:CDS	35.0%
	AACACTTTCAATGTCCGAAC+GGG	-	contig583end:3189-3208	MsG0080048980.01.T01:CDS	40.0%
	AAGGTCTACACCAACACAAA+CGG	+	contig583end:3257-3276	None:intergenic	40.0%
	CTTGAAGATGGTTGAAGGAA+AGG	-	contig583end:3414-3433	MsG0080048980.01.T01:CDS	40.0%
	GAACACTTTCAATGTCCGAA+CGG	-	contig583end:3188-3207	MsG0080048980.01.T01:CDS	40.0%
	TACTGTTCCTCAAACCAACT+TGG	-	contig583end:3487-3506	MsG0080048980.01.T01:CDS	40.0%
	TATCTGCACATTGGACTATG+AGG	+	contig583end:3526-3545	None:intergenic	40.0%
	TGATGAGCCAAATACTCAGT+TGG	+	contig583end:3295-3314	None:intergenic	40.0%
!	GTGTTGGTGTAGACCTTAAC+AGG	-	contig583end:3260-3279	MsG0080048980.01.T01:CDS	45.0%
	AGGAGGAGGATCAAACAACG+CGG	-	contig583end:3213-3232	MsG0080048980.01.T01:CDS	50.0%
	CAAACGGCTAGGTAGCCTTT+CGG	+	contig583end:3241-3260	None:intergenic	50.0%
	CTACACCAACACAAACGGCT+AGG	+	contig583end:3252-3271	None:intergenic	50.0%
	CTTTCAATGTCCGAACGGGA+AGG	-	contig583end:3193-3212	MsG0080048980.01.T01:CDS	50.0%
	TCAAACAACGCGGTTCCGAA+AGG	-	contig583end:3223-3242	MsG0080048980.01.T01:CDS	50.0%
	GGCTACCTAGCCGTTTGTGT+TGG	-	contig583end:3244-3263	MsG0080048980.01.T01:CDS	55.0%
	TCAATGTCCGAACGGGAAGG+AGG	-	contig583end:3196-3215	MsG0080048980.01.T01:CDS	55.0%
	TGATCCTCCTCCTTCCCGTT+CGG	+	contig583end:3206-3225	None:intergenic	55.0%
	ATGTCCGAACGGGAAGGAGG+AGG	-	contig583end:3199-3218	MsG0080048980.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
contig583end	gene	3031	3546	3031	ID=MsG0080048980.01;Name=MsG0080048980.01
contig583end	mRNA	3031	3546	3031	ID=MsG0080048980.01.T01;Parent=MsG0080048980.01;Name=MsG0080048980.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|171
contig583end	exon	3031	3546	3031	ID=MsG0080048980.01.T01:exon:24840;Parent=MsG0080048980.01.T01
contig583end	CDS	3031	3546	3031	ID=MsG0080048980.01.T01:cds;Parent=MsG0080048980.01.T01

Gene Sequence

>MsG0080048980.01.T01

ATGGATCCACCAAAGAAACCTAACAAAATCAGAGAAATTGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAGAGTAGCCAATACTTCAAAAACAAACAGAAGCAGCAGCAACAATAACAACAGTACTACTAGTAAAAGCATAAAGTTTCTGAAAAGAACACTTTCAATGTCCGAACGGGAAGGAGGAGGATCAAACAACGCGGTTCCGAAAGGCTACCTAGCCGTTTGTGTTGGTGTAGACCTTAACAGGTTTGTTATACCAACTGAGTATTTGGCTCATCAAGCCTTTCATATATTACTCAGAGAAGCTGAAGAAGAATTTGGGTTTGAACAAACTGGTGTTCTGAGAATTCCTTGTGAAGTTTCAGTGTTTGAGAGTATCTTGAAGATGGTTGAAGGAAAGGATAGATTTTCTACTCAGAAATGTAGATTTGGCATTGAAAAGATGATGGGATACTGTTCCTCAAACCAACTTGGTTATTATCATCAACCTCATAGTCCAATGTGCAGATAG

Protein sequence

>MsG0080048980.01.T01

MDPPKKPNKIREIVRLQQILKKWRRVANTSKTNRSSSNNNNSTTSKSIKFLKRTLSMSEREGGGSNNAVPKGYLAVCVGVDLNRFVIPTEYLAHQAFHILLREAEEEFGFEQTGVLRIPCEVSVFESILKMVEGKDRFSTQKCRFGIEKMMGYCSSNQLGYYHQPHSPMCR*