Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036367.01.T01 | XP_003621331.1 | 86.301 | 365 | 50 | 0 | 2 | 366 | 3 | 367 | 0 | 666 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036367.01.T01 | P93324 | 61.853 | 367 | 131 | 3 | 7 | 366 | 8 | 372 | 6.06E-169 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036367.01.T01 | G7L359 | 86.301 | 365 | 50 | 0 | 2 | 366 | 3 | 367 | 0.0 | 666 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0780036367.01 | 0.813375 | 2.642898e-51 | 1.723020e-48 |
| MsG0080049154.01 | MsG0780036367.01 | 0.804621 | 1.978218e-49 | 1.024774e-46 |
| MsG0180000399.01 | MsG0780036367.01 | 0.821522 | 3.860965e-53 | 3.148374e-50 |
| MsG0180000930.01 | MsG0780036367.01 | 0.807564 | 4.751931e-50 | 2.655352e-47 |
| MsG0180001108.01 | MsG0780036367.01 | 0.816984 | 4.172478e-52 | 3.001256e-49 |
| MsG0180001499.01 | MsG0780036367.01 | 0.802604 | 5.184829e-49 | 2.550527e-46 |
| MsG0180001513.01 | MsG0780036367.01 | 0.829108 | 6.189701e-55 | 6.273766e-52 |
| MsG0180002935.01 | MsG0780036367.01 | 0.822264 | 2.600271e-53 | 2.165645e-50 |
| MsG0180003249.01 | MsG0780036367.01 | 0.814854 | 1.246104e-51 | 8.455434e-49 |
| MsG0180003250.01 | MsG0780036367.01 | 0.813374 | 2.644312e-51 | 1.723880e-48 |
| MsG0180003375.01 | MsG0780036367.01 | 0.825073 | 5.717077e-54 | 5.157460e-51 |
| MsG0180004942.01 | MsG0780036367.01 | 0.834350 | 3.154263e-56 | 3.733351e-53 |
| MsG0180005417.01 | MsG0780036367.01 | 0.824919 | 6.217136e-54 | 5.584142e-51 |
| MsG0280006442.01 | MsG0780036367.01 | 0.813717 | 2.222466e-51 | 1.462433e-48 |
| MsG0280011238.01 | MsG0780036367.01 | 0.837162 | 6.115168e-57 | 7.876192e-54 |
| MsG0280011267.01 | MsG0780036367.01 | 0.834938 | 2.243666e-56 | 2.702818e-53 |
| MsG0380011635.01 | MsG0780036367.01 | 0.829076 | 6.302205e-55 | 6.381435e-52 |
| MsG0380011636.01 | MsG0780036367.01 | 0.814093 | 1.835846e-51 | 1.220340e-48 |
| MsG0380011968.01 | MsG0780036367.01 | 0.869457 | 3.053439e-66 | 1.146895e-62 |
| MsG0380011974.01 | MsG0780036367.01 | 0.844481 | 7.359938e-59 | 1.189848e-55 |
| MsG0380012654.01 | MsG0780036367.01 | 0.817501 | 3.191183e-52 | 2.328075e-49 |
| MsG0380012889.01 | MsG0780036367.01 | 0.814119 | 1.812273e-51 | 1.205520e-48 |
| MsG0380013272.01 | MsG0780036367.01 | 0.810311 | 1.227546e-50 | 7.374618e-48 |
| MsG0380013285.01 | MsG0780036367.01 | 0.824949 | 6.116896e-54 | 5.498582e-51 |
| MsG0680030960.01 | MsG0780036367.01 | 0.810647 | 1.038943e-50 | 6.297657e-48 |
| MsG0680031009.01 | MsG0780036367.01 | 0.833423 | 5.378083e-56 | 6.190968e-53 |
| MsG0680032343.01 | MsG0780036367.01 | 0.836699 | 8.031037e-57 | 1.020036e-53 |
| MsG0680033754.01 | MsG0780036367.01 | 0.800484 | 1.410122e-48 | 6.573658e-46 |
| MsG0680034418.01 | MsG0780036367.01 | 0.801576 | 8.436745e-49 | 4.043078e-46 |
| MsG0480018521.01 | MsG0780036367.01 | 0.817685 | 2.900725e-52 | 2.126821e-49 |
| MsG0480018563.01 | MsG0780036367.01 | 0.824345 | 8.486703e-54 | 7.496666e-51 |
| MsG0480019842.01 | MsG0780036367.01 | 0.814248 | 1.697090e-51 | 1.132885e-48 |
| MsG0480020722.01 | MsG0780036367.01 | 0.815029 | 1.139565e-51 | 7.769510e-49 |
| MsG0480021360.01 | MsG0780036367.01 | 0.818596 | 1.804949e-52 | 1.356912e-49 |
| MsG0480022309.01 | MsG0780036367.01 | 0.854976 | 8.599232e-62 | 1.954940e-58 |
| MsG0480022310.01 | MsG0780036367.01 | 0.850817 | 1.328669e-60 | 2.635388e-57 |
| MsG0480022428.01 | MsG0780036367.01 | 0.836887 | 7.188824e-57 | 9.183163e-54 |
| MsG0480022735.01 | MsG0780036367.01 | 0.835558 | 1.564302e-56 | 1.919699e-53 |
| MsG0480022736.01 | MsG0780036367.01 | 0.824913 | 6.238648e-54 | 5.602345e-51 |
| MsG0480022833.01 | MsG0780036367.01 | 0.851606 | 7.953059e-61 | 1.618378e-57 |
| MsG0480023107.01 | MsG0780036367.01 | 0.810758 | 9.828838e-51 | 5.975828e-48 |
| MsG0580024202.01 | MsG0780036367.01 | 0.840770 | 7.119532e-58 | 1.024630e-54 |
| MsG0580024207.01 | MsG0780036367.01 | 0.840420 | 8.792480e-58 | 1.251734e-54 |
| MsG0580024217.01 | MsG0780036367.01 | 0.817063 | 4.003916e-52 | 2.886148e-49 |
| MsG0580024218.01 | MsG0780036367.01 | 0.856309 | 3.510340e-62 | 8.341590e-59 |
| MsG0580024219.01 | MsG0780036367.01 | 0.851479 | 8.642579e-61 | 1.751475e-57 |
| MsG0580024220.01 | MsG0780036367.01 | 0.809007 | 2.340883e-50 | 1.358605e-47 |
| MsG0580024839.01 | MsG0780036367.01 | 0.800996 | 1.108798e-48 | 5.236933e-46 |
| MsG0580024990.01 | MsG0780036367.01 | 0.836486 | 9.100482e-57 | 1.148461e-53 |
| MsG0580025023.01 | MsG0780036367.01 | 0.805658 | 1.200175e-49 | 6.385624e-47 |
| MsG0580025432.01 | MsG0780036367.01 | 0.820687 | 6.012839e-53 | 4.790335e-50 |
| MsG0580025590.01 | MsG0780036367.01 | 0.826460 | 2.679717e-54 | 2.514677e-51 |
| MsG0580025682.01 | MsG0780036367.01 | 0.834795 | 2.437745e-56 | 2.923714e-53 |
| MsG0580025965.01 | MsG0780036367.01 | 0.836605 | 8.487306e-57 | 1.074846e-53 |
| MsG0380015323.01 | MsG0780036367.01 | 0.812695 | 3.724251e-51 | 2.384096e-48 |
| MsG0380015572.01 | MsG0780036367.01 | 0.806444 | 8.202704e-50 | 4.452903e-47 |
| MsG0380015660.01 | MsG0780036367.01 | 0.830994 | 2.145669e-55 | 2.297999e-52 |
| MsG0380016372.01 | MsG0780036367.01 | 0.830473 | 2.879827e-55 | 3.037031e-52 |
| MsG0380016862.01 | MsG0780036367.01 | 0.802377 | 5.773698e-49 | 2.824050e-46 |
| MsG0380017151.01 | MsG0780036367.01 | 0.832217 | 1.072233e-55 | 1.190560e-52 |
| MsG0380017565.01 | MsG0780036367.01 | 0.811151 | 8.079634e-51 | 4.963643e-48 |
| MsG0380017901.01 | MsG0780036367.01 | 0.800506 | 1.395854e-48 | 6.510605e-46 |
| MsG0580026162.01 | MsG0780036367.01 | 0.841578 | 4.363623e-58 | 6.439990e-55 |
| MsG0580026925.01 | MsG0780036367.01 | 0.829253 | 5.709362e-55 | 5.812357e-52 |
| MsG0580027337.01 | MsG0780036367.01 | 0.827788 | 1.289405e-54 | 1.257443e-51 |
| MsG0580028490.01 | MsG0780036367.01 | 0.848817 | 4.813228e-60 | 8.942702e-57 |
| MsG0580029240.01 | MsG0780036367.01 | 0.801989 | 6.940201e-49 | 3.360886e-46 |
| MsG0580030145.01 | MsG0780036367.01 | 0.822254 | 2.613305e-53 | 2.175908e-50 |
| MsG0680030613.01 | MsG0780036367.01 | 0.844085 | 9.403018e-59 | 1.501385e-55 |
| MsG0280006559.01 | MsG0780036367.01 | 0.827178 | 1.806124e-54 | 1.730492e-51 |
| MsG0280007911.01 | MsG0780036367.01 | 0.815821 | 7.597315e-52 | 5.293040e-49 |
| MsG0280007922.01 | MsG0780036367.01 | 0.803702 | 3.073216e-49 | 1.554824e-46 |
| MsG0280008202.01 | MsG0780036367.01 | 0.804702 | 1.902533e-49 | 9.876746e-47 |
| MsG0280009232.01 | MsG0780036367.01 | 0.817744 | 2.813303e-52 | 2.066110e-49 |
| MsG0280009656.01 | MsG0780036367.01 | 0.802859 | 4.593531e-49 | 2.274402e-46 |
| MsG0280010410.01 | MsG0780036367.01 | 0.812572 | 3.963867e-51 | 2.529190e-48 |
| MsG0280010515.01 | MsG0780036367.01 | 0.804492 | 2.104633e-49 | 1.086642e-46 |
| MsG0780036367.01 | MsG0780036369.01 | 0.824981 | 6.012724e-54 | 5.409954e-51 |
| MsG0780036367.01 | MsG0780036370.01 | 0.834302 | 3.243051e-56 | 3.833027e-53 |
| MsG0780036367.01 | MsG0780036480.01 | 0.816905 | 4.346325e-52 | 3.119317e-49 |
| MsG0780036367.01 | MsG0780036959.01 | 0.823826 | 1.123843e-53 | 9.783908e-51 |
| MsG0780036367.01 | MsG0780036960.01 | 0.832659 | 8.333909e-56 | 9.376844e-53 |
| MsG0780036367.01 | MsG0780038519.01 | 0.848475 | 5.986271e-60 | 1.100052e-56 |
| MsG0780036367.01 | MsG0780039190.01 | 0.825957 | 3.530646e-54 | 3.266184e-51 |
| MsG0780036367.01 | MsG0780039237.01 | 0.816448 | 5.502417e-52 | 3.899668e-49 |
| MsG0780036367.01 | MsG0780039576.01 | 0.843137 | 1.686191e-58 | 2.612891e-55 |
| MsG0780036367.01 | MsG0780039883.01 | 0.802215 | 6.236420e-49 | 3.037510e-46 |
| MsG0780036367.01 | MsG0780039949.01 | 0.807354 | 5.265547e-50 | 2.926448e-47 |
| MsG0780036367.01 | MsG0780039968.01 | 0.807239 | 5.571324e-50 | 3.087131e-47 |
| MsG0780036367.01 | MsG0780040497.01 | 0.825635 | 4.209124e-54 | 3.858187e-51 |
| MsG0780036367.01 | MsG0780040553.01 | 0.805310 | 1.419678e-49 | 7.486236e-47 |
| MsG0780036367.01 | MsG0780040615.01 | 0.808216 | 3.454352e-50 | 1.963684e-47 |
| MsG0780036367.01 | MsG0780040977.01 | 0.806339 | 8.630455e-50 | 4.672500e-47 |
| MsG0780036367.01 | MsG0780041180.01 | 0.822142 | 2.774463e-53 | 2.302703e-50 |
| MsG0780036367.01 | MsG0880042740.01 | 0.803320 | 3.688011e-49 | 1.847642e-46 |
| MsG0780036367.01 | MsG0880042810.01 | 0.803764 | 2.983377e-49 | 1.511828e-46 |
| MsG0780036367.01 | MsG0880043212.01 | 0.806928 | 6.482736e-50 | 3.563170e-47 |
| MsG0780036367.01 | MsG0880043481.01 | 0.853256 | 2.695011e-61 | 5.787882e-58 |
| MsG0780036367.01 | MsG0880045677.01 | 0.840731 | 7.288001e-58 | 1.047636e-54 |
| MsG0780036367.01 | MsG0880046271.01 | 0.823097 | 1.663606e-53 | 1.418775e-50 |
| MsG0780036367.01 | MsG0880046429.01 | 0.832307 | 1.018897e-55 | 1.134238e-52 |
| MsG0780036367.01 | MsG0880046932.01 | 0.812370 | 4.387061e-51 | 2.784303e-48 |
| MsG0780036367.01 | MsG0880046961.01 | 0.801445 | 8.972694e-49 | 4.285863e-46 |
| MsG0780036367.01 | MsG0880047714.01 | 0.852250 | 5.221041e-61 | 1.084447e-57 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036367.01.T01 | MTR_7g011990 | 86.301 | 365 | 50 | 0 | 2 | 366 | 3 | 367 | 0.0 | 666 |
| MsG0780036367.01.T01 | MTR_7g011900 | 79.730 | 370 | 68 | 3 | 2 | 366 | 3 | 370 | 0.0 | 611 |
| MsG0780036367.01.T01 | MTR_7g012040 | 74.595 | 370 | 88 | 2 | 1 | 366 | 1 | 368 | 0.0 | 575 |
| MsG0780036367.01.T01 | MTR_7g012020 | 72.703 | 370 | 96 | 2 | 1 | 366 | 1 | 369 | 0.0 | 569 |
| MsG0780036367.01.T01 | MTR_7g012090 | 69.786 | 374 | 103 | 3 | 2 | 366 | 3 | 375 | 0.0 | 530 |
| MsG0780036367.01.T01 | MTR_7g012070 | 68.449 | 374 | 108 | 3 | 2 | 366 | 3 | 375 | 0.0 | 528 |
| MsG0780036367.01.T01 | MTR_2g055940 | 68.286 | 350 | 107 | 2 | 20 | 366 | 15 | 363 | 3.66e-180 | 504 |
| MsG0780036367.01.T01 | MTR_1g096310 | 61.580 | 367 | 132 | 3 | 7 | 366 | 8 | 372 | 1.02e-169 | 478 |
| MsG0780036367.01.T01 | MTR_7g012020 | 74.638 | 276 | 65 | 2 | 1 | 272 | 1 | 275 | 6.61e-153 | 432 |
| MsG0780036367.01.T01 | MTR_7g012020 | 75.494 | 253 | 57 | 2 | 1 | 249 | 1 | 252 | 4.84e-140 | 398 |
| MsG0780036367.01.T01 | MTR_1g036460 | 49.598 | 373 | 175 | 6 | 3 | 366 | 2 | 370 | 7.18e-128 | 372 |
| MsG0780036367.01.T01 | MTR_1g036490 | 48.257 | 373 | 180 | 6 | 3 | 366 | 2 | 370 | 5.62e-126 | 367 |
| MsG0780036367.01.T01 | MTR_3g021440 | 51.275 | 353 | 162 | 6 | 20 | 366 | 22 | 370 | 2.36e-117 | 345 |
| MsG0780036367.01.T01 | MTR_3g021430 | 50.693 | 361 | 168 | 6 | 12 | 366 | 1 | 357 | 3.44e-117 | 344 |
| MsG0780036367.01.T01 | MTR_1g036510 | 48.267 | 375 | 179 | 7 | 1 | 366 | 16 | 384 | 2.71e-116 | 343 |
| MsG0780036367.01.T01 | MTR_3g092900 | 44.231 | 364 | 192 | 7 | 8 | 366 | 6 | 363 | 1.74e-101 | 304 |
| MsG0780036367.01.T01 | MTR_5g098170 | 39.944 | 358 | 200 | 8 | 18 | 366 | 12 | 363 | 2.62e-88 | 271 |
| MsG0780036367.01.T01 | MTR_7g118300 | 39.674 | 368 | 212 | 7 | 4 | 366 | 13 | 375 | 7.20e-86 | 265 |
| MsG0780036367.01.T01 | MTR_0591s0010 | 39.669 | 363 | 205 | 10 | 13 | 366 | 20 | 377 | 3.61e-83 | 258 |
| MsG0780036367.01.T01 | MTR_7g118320 | 39.118 | 363 | 209 | 7 | 12 | 366 | 4 | 362 | 8.27e-80 | 249 |
| MsG0780036367.01.T01 | MTR_1g050220 | 42.424 | 330 | 131 | 6 | 25 | 346 | 6 | 284 | 4.99e-79 | 244 |
| MsG0780036367.01.T01 | MTR_1g036510 | 49.275 | 276 | 126 | 6 | 1 | 268 | 16 | 285 | 2.11e-78 | 243 |
| MsG0780036367.01.T01 | MTR_8g068690 | 37.845 | 362 | 213 | 8 | 13 | 366 | 19 | 376 | 1.39e-77 | 243 |
| MsG0780036367.01.T01 | MTR_8g068750 | 36.740 | 362 | 217 | 8 | 13 | 366 | 20 | 377 | 9.52e-77 | 241 |
| MsG0780036367.01.T01 | MTR_8g068870 | 38.235 | 340 | 199 | 6 | 34 | 366 | 28 | 363 | 1.99e-75 | 238 |
| MsG0780036367.01.T01 | MTR_8g024160 | 36.202 | 337 | 174 | 5 | 18 | 353 | 20 | 316 | 1.23e-69 | 221 |
| MsG0780036367.01.T01 | MTR_6g060290 | 61.749 | 183 | 51 | 4 | 2 | 180 | 3 | 170 | 2.92e-69 | 215 |
| MsG0780036367.01.T01 | MTR_1g036510 | 48.000 | 250 | 116 | 6 | 1 | 242 | 16 | 259 | 2.75e-66 | 211 |
| MsG0780036367.01.T01 | MTR_6g078850 | 34.584 | 373 | 224 | 8 | 8 | 364 | 13 | 381 | 2.64e-65 | 215 |
| MsG0780036367.01.T01 | MTR_8g068570 | 38.788 | 330 | 162 | 12 | 13 | 333 | 20 | 318 | 3.57e-65 | 209 |
| MsG0780036367.01.T01 | MTR_2g072790 | 37.423 | 326 | 185 | 9 | 32 | 347 | 20 | 336 | 1.69e-59 | 196 |
| MsG0780036367.01.T01 | MTR_3g096050 | 36.517 | 356 | 198 | 11 | 25 | 366 | 17 | 358 | 7.35e-57 | 189 |
| MsG0780036367.01.T01 | MTR_8g068730 | 32.967 | 364 | 196 | 10 | 13 | 366 | 20 | 345 | 1.07e-53 | 181 |
| MsG0780036367.01.T01 | MTR_8g068690 | 36.604 | 265 | 158 | 6 | 13 | 270 | 19 | 280 | 1.19e-50 | 171 |
| MsG0780036367.01.T01 | MTR_3g096070 | 35.756 | 344 | 170 | 12 | 37 | 366 | 29 | 335 | 1.43e-50 | 172 |
| MsG0780036367.01.T01 | MTR_0017s0100 | 34.891 | 321 | 192 | 10 | 40 | 352 | 44 | 355 | 1.93e-50 | 173 |
| MsG0780036367.01.T01 | MTR_0079s0070 | 34.769 | 325 | 187 | 11 | 40 | 352 | 10 | 321 | 1.42e-49 | 169 |
| MsG0780036367.01.T01 | MTR_4g038440 | 34.675 | 323 | 190 | 11 | 40 | 352 | 44 | 355 | 3.16e-49 | 170 |
| MsG0780036367.01.T01 | MTR_3g083620 | 34.062 | 320 | 195 | 9 | 38 | 351 | 38 | 347 | 3.51e-49 | 169 |
| MsG0780036367.01.T01 | MTR_1g076940 | 30.938 | 320 | 208 | 6 | 40 | 351 | 33 | 347 | 2.08e-45 | 159 |
| MsG0780036367.01.T01 | MTR_5g074600 | 29.966 | 297 | 195 | 6 | 64 | 352 | 55 | 346 | 2.47e-44 | 156 |
| MsG0780036367.01.T01 | MTR_8g068600 | 35.156 | 256 | 149 | 6 | 45 | 286 | 27 | 279 | 8.10e-44 | 153 |
| MsG0780036367.01.T01 | MTR_5g074680 | 29.032 | 310 | 202 | 7 | 61 | 365 | 57 | 353 | 2.18e-40 | 146 |
| MsG0780036367.01.T01 | MTR_3g096050 | 39.834 | 241 | 126 | 8 | 37 | 268 | 29 | 259 | 2.32e-40 | 143 |
| MsG0780036367.01.T01 | MTR_5g074580 | 30.961 | 281 | 184 | 5 | 77 | 352 | 72 | 347 | 5.50e-40 | 145 |
| MsG0780036367.01.T01 | MTR_7g014570 | 28.931 | 318 | 208 | 6 | 40 | 351 | 33 | 338 | 5.84e-40 | 145 |
| MsG0780036367.01.T01 | MTR_4g088340 | 27.596 | 337 | 225 | 7 | 37 | 365 | 7 | 332 | 2.94e-39 | 142 |
| MsG0780036367.01.T01 | MTR_4g033015 | 32.353 | 340 | 203 | 9 | 39 | 361 | 32 | 361 | 8.37e-39 | 142 |
| MsG0780036367.01.T01 | MTR_7g024520 | 30.303 | 297 | 171 | 11 | 80 | 364 | 73 | 345 | 2.29e-38 | 140 |
| MsG0780036367.01.T01 | MTR_4g079160 | 30.537 | 298 | 191 | 8 | 61 | 352 | 55 | 342 | 4.45e-38 | 140 |
| MsG0780036367.01.T01 | MTR_4g033200 | 32.059 | 340 | 204 | 9 | 39 | 361 | 32 | 361 | 4.88e-38 | 140 |
| MsG0780036367.01.T01 | MTR_4g088345 | 27.893 | 337 | 224 | 8 | 37 | 365 | 30 | 355 | 5.77e-38 | 139 |
| MsG0780036367.01.T01 | MTR_7g024500 | 29.897 | 291 | 180 | 9 | 80 | 364 | 73 | 345 | 5.96e-38 | 139 |
| MsG0780036367.01.T01 | MTR_4g088200 | 30.091 | 329 | 215 | 8 | 33 | 352 | 26 | 348 | 1.76e-37 | 138 |
| MsG0780036367.01.T01 | MTR_7g014510 | 27.931 | 290 | 198 | 4 | 65 | 351 | 62 | 343 | 1.90e-37 | 138 |
| MsG0780036367.01.T01 | MTR_5g074540 | 32.883 | 222 | 144 | 3 | 136 | 352 | 107 | 328 | 2.43e-36 | 135 |
| MsG0780036367.01.T01 | MTR_8g068740 | 30.686 | 277 | 150 | 7 | 13 | 282 | 20 | 261 | 4.95e-36 | 132 |
| MsG0780036367.01.T01 | MTR_4g033150 | 30.539 | 334 | 206 | 9 | 39 | 356 | 32 | 355 | 1.49e-35 | 133 |
| MsG0780036367.01.T01 | MTR_8g068620 | 49.091 | 110 | 56 | 0 | 160 | 269 | 2 | 111 | 4.66e-33 | 119 |
| MsG0780036367.01.T01 | MTR_4g088190 | 30.952 | 336 | 206 | 8 | 33 | 352 | 26 | 351 | 7.42e-33 | 126 |
| MsG0780036367.01.T01 | MTR_5g074610 | 36.129 | 155 | 96 | 1 | 201 | 352 | 159 | 313 | 2.19e-30 | 119 |
| MsG0780036367.01.T01 | MTR_1g076930 | 31.120 | 241 | 147 | 8 | 37 | 268 | 7 | 237 | 7.16e-30 | 115 |
| MsG0780036367.01.T01 | MTR_4g033170 | 27.711 | 332 | 221 | 8 | 40 | 361 | 33 | 355 | 4.66e-27 | 110 |
| MsG0780036367.01.T01 | MTR_4g033085 | 28.235 | 255 | 169 | 6 | 40 | 289 | 33 | 278 | 2.35e-25 | 105 |
| MsG0780036367.01.T01 | MTR_4g038440 | 31.933 | 238 | 142 | 8 | 40 | 268 | 44 | 270 | 4.47e-25 | 103 |
| MsG0780036367.01.T01 | MTR_0794s0020 | 28.634 | 227 | 140 | 7 | 39 | 253 | 32 | 248 | 8.16e-19 | 85.1 |
| MsG0780036367.01.T01 | MTR_8g068760 | 41.000 | 100 | 57 | 2 | 268 | 366 | 135 | 233 | 4.77e-18 | 82.8 |
| MsG0780036367.01.T01 | MTR_6g060280 | 63.492 | 63 | 17 | 2 | 220 | 277 | 1 | 62 | 1.34e-17 | 77.0 |
| MsG0780036367.01.T01 | MTR_8g068580 | 45.161 | 93 | 47 | 4 | 276 | 366 | 43 | 133 | 9.69e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036367.01.T01 | AT5G54160 | 47.368 | 342 | 174 | 4 | 20 | 358 | 16 | 354 | 3.23e-107 | 319 |
| MsG0780036367.01.T01 | AT1G77520 | 38.873 | 355 | 202 | 8 | 24 | 366 | 30 | 381 | 4.70e-81 | 253 |
| MsG0780036367.01.T01 | AT1G51990 | 37.101 | 345 | 208 | 3 | 20 | 357 | 12 | 354 | 9.22e-80 | 249 |
| MsG0780036367.01.T01 | AT1G33030 | 40.462 | 346 | 195 | 8 | 27 | 366 | 10 | 350 | 2.88e-79 | 247 |
| MsG0780036367.01.T01 | AT1G51990 | 36.812 | 345 | 209 | 3 | 20 | 357 | 12 | 354 | 9.69e-79 | 246 |
| MsG0780036367.01.T01 | AT1G63140 | 40.385 | 364 | 192 | 13 | 20 | 366 | 26 | 381 | 4.05e-72 | 229 |
| MsG0780036367.01.T01 | AT1G63140 | 40.385 | 364 | 192 | 13 | 20 | 366 | 46 | 401 | 4.90e-72 | 230 |
| MsG0780036367.01.T01 | AT1G21100 | 39.548 | 354 | 197 | 7 | 16 | 356 | 15 | 364 | 4.88e-70 | 224 |
| MsG0780036367.01.T01 | AT1G21130 | 39.326 | 356 | 199 | 7 | 14 | 356 | 13 | 364 | 3.96e-69 | 221 |
| MsG0780036367.01.T01 | AT1G21110 | 39.266 | 354 | 198 | 7 | 16 | 356 | 15 | 364 | 4.83e-67 | 216 |
| MsG0780036367.01.T01 | AT1G77530 | 38.028 | 355 | 205 | 9 | 24 | 366 | 30 | 381 | 8.75e-67 | 216 |
| MsG0780036367.01.T01 | AT5G53810 | 37.427 | 342 | 200 | 7 | 37 | 366 | 39 | 378 | 2.16e-66 | 214 |
| MsG0780036367.01.T01 | AT1G21120 | 38.701 | 354 | 200 | 7 | 16 | 356 | 15 | 364 | 5.68e-66 | 213 |
| MsG0780036367.01.T01 | AT1G21120 | 38.701 | 354 | 200 | 7 | 16 | 356 | 63 | 412 | 2.22e-65 | 213 |
| MsG0780036367.01.T01 | AT1G76790 | 38.649 | 370 | 197 | 11 | 17 | 366 | 6 | 365 | 1.77e-62 | 204 |
| MsG0780036367.01.T01 | AT3G53140 | 34.758 | 351 | 202 | 9 | 12 | 346 | 1 | 340 | 1.62e-57 | 191 |
| MsG0780036367.01.T01 | AT1G62900 | 46.798 | 203 | 105 | 3 | 166 | 366 | 4 | 205 | 2.38e-57 | 186 |
| MsG0780036367.01.T01 | AT1G33030 | 39.600 | 250 | 142 | 6 | 27 | 271 | 10 | 255 | 5.31e-51 | 172 |
| MsG0780036367.01.T01 | AT5G37170 | 34.062 | 320 | 168 | 9 | 56 | 366 | 49 | 334 | 2.37e-50 | 172 |
| MsG0780036367.01.T01 | AT1G33030 | 39.676 | 247 | 140 | 6 | 27 | 268 | 10 | 252 | 8.45e-50 | 168 |
| MsG0780036367.01.T01 | AT5G37170 | 41.919 | 198 | 111 | 4 | 172 | 366 | 38 | 234 | 5.75e-49 | 165 |
| MsG0780036367.01.T01 | AT5G37170 | 42.246 | 187 | 104 | 4 | 183 | 366 | 1 | 186 | 2.52e-46 | 156 |
| MsG0780036367.01.T01 | AT1G21130 | 39.098 | 266 | 147 | 5 | 14 | 268 | 13 | 274 | 4.89e-42 | 149 |
| MsG0780036367.01.T01 | AT1G63140 | 38.636 | 264 | 140 | 10 | 20 | 268 | 46 | 302 | 8.38e-41 | 146 |
| MsG0780036367.01.T01 | AT4G35160 | 31.402 | 328 | 207 | 8 | 38 | 351 | 44 | 367 | 5.31e-39 | 143 |
| MsG0780036367.01.T01 | AT4G35150 | 33.607 | 244 | 144 | 6 | 125 | 351 | 68 | 310 | 6.47e-38 | 139 |
| MsG0780036367.01.T01 | AT1G77530 | 36.986 | 219 | 126 | 6 | 34 | 242 | 40 | 256 | 1.11e-30 | 118 |
| MsG0780036367.01.T01 | AT1G63140 | 36.975 | 238 | 128 | 10 | 20 | 242 | 46 | 276 | 7.69e-30 | 116 |
Find 68 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGATATAGGATTAACTTTA+AGG | 0.161819 | 7:-7144789 | MsG0780036367.01.T01:intron |
| CTTGATGCATTTGTTGCTTC+TGG | 0.183069 | 7:+7144030 | None:intergenic |
| TCATTGATTTGTTGAATAAT+TGG | 0.195679 | 7:+7144678 | None:intergenic |
| CACAAAGCTTTGCCTCAAAA+TGG | 0.243448 | 7:-7144090 | MsG0780036367.01.T01:CDS |
| TGCAAAATATCCATCAATTA+AGG | 0.257882 | 7:-7144540 | MsG0780036367.01.T01:CDS |
| TTTAGGCTGTATGTCATAAT+TGG | 0.276446 | 7:-7144149 | MsG0780036367.01.T01:intron |
| AAAGAACAATATACCTGAAA+TGG | 0.279518 | 7:+7144475 | None:intergenic |
| GAGAGTTTGGCTCAACGTTC+TGG | 0.290728 | 7:-7143937 | MsG0780036367.01.T01:CDS |
| CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7:-7146893 | MsG0780036367.01.T01:CDS |
| GAAAATGCATCACCCATTTC+AGG | 0.295043 | 7:-7144488 | MsG0780036367.01.T01:intron |
| GGTAGCATAGTGAGTGTTTA+TGG | 0.300569 | 7:-7146731 | MsG0780036367.01.T01:CDS |
| ATGTGTCATCCTGCTTTGAT+AGG | 0.301521 | 7:-7146632 | MsG0780036367.01.T01:CDS |
| AAGTTGATTGCCTTAATTGA+TGG | 0.303709 | 7:+7144530 | None:intergenic |
| AACTGCTGGAAACACTAAAT+TGG | 0.308710 | 7:+7146934 | None:intergenic |
| CATATCCTTTGTATATTTCA+AGG | 0.318611 | 7:+7144624 | None:intergenic |
| TGTTGTGCTTTCTCTATCAT+TGG | 0.319924 | 7:-7143892 | MsG0780036367.01.T01:CDS |
| TCTTGTGGCACATGTACTAT+TGG | 0.327244 | 7:-7144058 | MsG0780036367.01.T01:CDS |
| TGCAAAAGAATATGAGAGTT+TGG | 0.338232 | 7:-7143950 | MsG0780036367.01.T01:CDS |
| TAACCCAACCTTAAGCATTA+TGG | 0.341590 | 7:+7144297 | None:intergenic |
| AATAGTGACCATGGTTATCT+TGG | 0.387856 | 7:-7146671 | MsG0780036367.01.T01:CDS |
| GTTGATGTTGGAGGTGGAAA+TGG | 0.399088 | 7:-7144584 | MsG0780036367.01.T01:CDS |
| GTCTCAACTTTGGTTGATGT+TGG | 0.399884 | 7:-7144596 | MsG0780036367.01.T01:CDS |
| AACACTCTGATTTGCCGAAT+CGG | 0.420138 | 7:-7146823 | MsG0780036367.01.T01:CDS |
| GTTTATGGGATCACACCTTC+TGG | 0.427376 | 7:-7146716 | MsG0780036367.01.T01:CDS |
| AACATACGCTCGAGCCGATT+CGG | 0.429975 | 7:+7146809 | None:intergenic |
| TATCACTATCATCTATTTGT+GGG | 0.435409 | 7:+7146981 | None:intergenic |
| TGAAATATACAAAGGATATG+AGG | 0.436772 | 7:-7144621 | MsG0780036367.01.T01:CDS |
| CACTATGCTACCATCATCAT+TGG | 0.442096 | 7:+7146742 | None:intergenic |
| AGGAGATGCCATAATGCTTA+AGG | 0.462667 | 7:-7144305 | MsG0780036367.01.T01:intron |
| GTAGCATAGTGAGTGTTTAT+GGG | 0.464079 | 7:-7146730 | MsG0780036367.01.T01:CDS |
| AAGAACAATATACCTGAAAT+GGG | 0.477567 | 7:+7144476 | None:intergenic |
| ATTGCAGCATTAAGAACTGC+TGG | 0.480012 | 7:+7146920 | None:intergenic |
| TCAACTTTGGTTGATGTTGG+AGG | 0.484211 | 7:-7144593 | MsG0780036367.01.T01:CDS |
| GTATCACTATCATCTATTTG+TGG | 0.490917 | 7:+7146980 | None:intergenic |
| TTGAATAATTGGTTTACTTG+TGG | 0.491591 | 7:+7144689 | None:intergenic |
| TAAGGATGCAGTACTTGATC+CGG | 0.492794 | 7:-7144771 | MsG0780036367.01.T01:CDS |
| ACACTCACAGCTATGGTACT+TGG | 0.499840 | 7:-7146959 | MsG0780036367.01.T01:CDS |
| TGTGTCATCCTGCTTTGATA+GGG | 0.514622 | 7:-7146631 | MsG0780036367.01.T01:CDS |
| TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7:-7146887 | MsG0780036367.01.T01:CDS |
| AATATCTAAGTATGAGTACA+TGG | 0.524282 | 7:-7144720 | MsG0780036367.01.T01:CDS |
| ATCCTGCTTTGATAGGGTTG+TGG | 0.524365 | 7:-7146625 | MsG0780036367.01.T01:intron |
| CATTTAGGGATTGAGCATGT+TGG | 0.530865 | 7:-7144355 | MsG0780036367.01.T01:intron |
| ATCATGTTCATTAATGCTGG+TGG | 0.543605 | 7:-7143985 | MsG0780036367.01.T01:CDS |
| ACTTTGGTTGATGTTGGAGG+TGG | 0.544466 | 7:-7144590 | MsG0780036367.01.T01:CDS |
| GGCAAATCAGAGTGTTGAGT+TGG | 0.551660 | 7:+7146830 | None:intergenic |
| AGCATTATGGCATCTCCTTG+TGG | 0.554368 | 7:+7144310 | None:intergenic |
| AATATCATGTTCATTAATGC+TGG | 0.556116 | 7:-7143988 | MsG0780036367.01.T01:CDS |
| ATATGAGGGAGTCTCAACTT+TGG | 0.556261 | 7:-7144606 | MsG0780036367.01.T01:CDS |
| TTTCTCTATCATTGGAGTGA+TGG | 0.559888 | 7:-7143884 | MsG0780036367.01.T01:CDS |
| GAAATATACAAAGGATATGA+GGG | 0.561483 | 7:-7144620 | MsG0780036367.01.T01:CDS |
| GTAAACACACACACTATCAA+AGG | 0.565568 | 7:-7147081 | MsG0780036367.01.T01:five_prime_UTR |
| TCTAATCGGACCAATGATGA+TGG | 0.567171 | 7:-7146752 | MsG0780036367.01.T01:CDS |
| TTAGGGATTGAGCATGTTGG+AGG | 0.570708 | 7:-7144352 | MsG0780036367.01.T01:intron |
| TACCACAACCCTATCAAAGC+AGG | 0.575416 | 7:+7146623 | None:intergenic |
| TAGTGATACACTCACAGCTA+TGG | 0.582892 | 7:-7146966 | MsG0780036367.01.T01:CDS |
| AGTAATATGACTCTTTAATG+TGG | 0.594030 | 7:-7143799 | MsG0780036367.01.T01:three_prime_UTR |
| ATCACTATCATCTATTTGTG+GGG | 0.595648 | 7:+7146982 | None:intergenic |
| AAATGGAAAGGTCATTCTTG+TGG | 0.596549 | 7:-7144073 | MsG0780036367.01.T01:CDS |
| TAACAAAAGTATTTACCAGA+AGG | 0.598640 | 7:+7146701 | None:intergenic |
| TAAGTATGAGTACATGGGAA+AGG | 0.599131 | 7:-7144714 | MsG0780036367.01.T01:CDS |
| AGCTTTGCCTCAAAATGGAA+AGG | 0.610192 | 7:-7144085 | MsG0780036367.01.T01:CDS |
| GGATGCAGTACTTGATCCGG+AGG | 0.613278 | 7:-7144768 | MsG0780036367.01.T01:CDS |
| AGAATCCTTGAAATATACAA+AGG | 0.621043 | 7:-7144629 | MsG0780036367.01.T01:CDS |
| GGGTGTGAGATTCAATCACA+TGG | 0.656942 | 7:+7147002 | None:intergenic |
| TATGATGAAAATAGTGACCA+TGG | 0.659727 | 7:-7146680 | MsG0780036367.01.T01:CDS |
| ATATCTAAGTATGAGTACAT+GGG | 0.676874 | 7:-7144719 | MsG0780036367.01.T01:CDS |
| ATGTTTGAAAACATTCCACA+AGG | 0.693962 | 7:-7144325 | MsG0780036367.01.T01:CDS |
| TGAATGAGCCAAGATAACCA+TGG | 0.765614 | 7:+7146663 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTAAAAAAAA+TGG | + | Chr7:7145711-7145730 | None:intergenic | 0.0% |
| !! | AAAATTGTAAAATTTCATTT+AGG | - | Chr7:7146447-7146466 | MsG0780036367.01.T01:intron | 10.0% |
| !! | AAATTGTAAAATTTCATTTA+GGG | - | Chr7:7146448-7146467 | MsG0780036367.01.T01:intron | 10.0% |
| !!! | AAATAAACTCAATTTTTAAA+AGG | - | Chr7:7144465-7144484 | MsG0780036367.01.T01:intron | 10.0% |
| !!! | TAATTTTCTAACAAATAATT+TGG | + | Chr7:7145018-7145037 | None:intergenic | 10.0% |
| !!! | TATTAAAATACATCTTTTTT+CGG | - | Chr7:7144357-7144376 | MsG0780036367.01.T01:intron | 10.0% |
| !!! | TTTTTTAAAAAAAATGGTTA+GGG | + | Chr7:7145705-7145724 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAAAAAAATGGTT+AGG | + | Chr7:7145706-7145725 | None:intergenic | 10.0% |
| !! | AAATAGACTTAAAATTATCA+AGG | + | Chr7:7145200-7145219 | None:intergenic | 15.0% |
| !! | AGTTTAAATAATTATTGAAG+TGG | + | Chr7:7146408-7146427 | None:intergenic | 15.0% |
| !! | TTAAAGAAAAACACTTAAAA+TGG | - | Chr7:7144299-7144318 | MsG0780036367.01.T01:intron | 15.0% |
| !!! | ATTTGTTACTTTATTTTAAG+AGG | - | Chr7:7144851-7144870 | MsG0780036367.01.T01:intron | 15.0% |
| !!! | GTTGTTTTGATATTTAAATA+TGG | - | Chr7:7147040-7147059 | MsG0780036367.01.T01:exon | 15.0% |
| !!! | TTTTCTTAATTTATATCTGA+AGG | + | Chr7:7145542-7145561 | None:intergenic | 15.0% |
| !! | ACCAATCAAAAAGATTTATT+AGG | - | Chr7:7145461-7145480 | MsG0780036367.01.T01:intron | 20.0% |
| !! | AGAAATGTAATTATTAAGCA+AGG | + | Chr7:7144230-7144249 | None:intergenic | 20.0% |
| !! | AGAAGCAACTTATTATTAAA+TGG | - | Chr7:7144878-7144897 | MsG0780036367.01.T01:intron | 20.0% |
| !! | ATCAATATTTACTGTCAAAT+AGG | + | Chr7:7145861-7145880 | None:intergenic | 20.0% |
| !! | CTAAAACATTGAAAAATAGA+TGG | + | Chr7:7146653-7146672 | None:intergenic | 20.0% |
| !! | GACTTATTCAAAAAAGTTAA+TGG | - | Chr7:7146074-7146093 | MsG0780036367.01.T01:intron | 20.0% |
| !! | GTCACTTCTATATATATAAA+TGG | + | Chr7:7144253-7144272 | None:intergenic | 20.0% |
| !! | GTTAGAAAATTAATTCTTGA+TGG | - | Chr7:7145026-7145045 | MsG0780036367.01.T01:intron | 20.0% |
| !! | TAAGTTATACTTGAATTCTA+AGG | - | Chr7:7145927-7145946 | MsG0780036367.01.T01:intron | 20.0% |
| !! | TAGAAATGAAACATGTATAT+CGG | + | Chr7:7145282-7145301 | None:intergenic | 20.0% |
| !! | TATATATATAGAAGTGACTA+AGG | - | Chr7:7144255-7144274 | MsG0780036367.01.T01:intron | 20.0% |
| !! | TCTCTAAATAAAATTAGCAT+TGG | - | Chr7:7145236-7145255 | MsG0780036367.01.T01:intron | 20.0% |
| !! | TTCTTTACAAGAATATAGTT+TGG | - | Chr7:7144744-7144763 | MsG0780036367.01.T01:CDS | 20.0% |
| !!! | CATCTATTTTTCAATGTTTT+AGG | - | Chr7:7146651-7146670 | MsG0780036367.01.T01:CDS | 20.0% |
| !!! | TCATTGATTTGTTGAATAAT+TGG | + | Chr7:7146142-7146161 | None:intergenic | 20.0% |
| !!! | TCTAAGGAATTTTTTTAGAA+TGG | - | Chr7:7145943-7145962 | MsG0780036367.01.T01:intron | 20.0% |
| !!! | TGTTATTTGTTAATTGTTAC+CGG | - | Chr7:7144960-7144979 | MsG0780036367.01.T01:intron | 20.0% |
| !!! | TTGACAGTAAATATTGATTA+CGG | - | Chr7:7145863-7145882 | MsG0780036367.01.T01:intron | 20.0% |
| ! | AAAGAACAATATACCTGAAA+TGG | + | Chr7:7146345-7146364 | None:intergenic | 25.0% |
| ! | AAGAACAATATACCTGAAAT+GGG | + | Chr7:7146344-7146363 | None:intergenic | 25.0% |
| ! | AATACATCTAACAGCTTATT+TGG | - | Chr7:7144394-7144413 | MsG0780036367.01.T01:intron | 25.0% |
| ! | AATATCATGTTCATTAATGC+TGG | - | Chr7:7146829-7146848 | MsG0780036367.01.T01:CDS | 25.0% |
| ! | AATATCTAAGTATGAGTACA+TGG | - | Chr7:7146097-7146116 | MsG0780036367.01.T01:intron | 25.0% |
| ! | ACTTAAAATTATCAAGGTGA+AGG | + | Chr7:7145194-7145213 | None:intergenic | 25.0% |
| ! | AGAATCCTTGAAATATACAA+AGG | - | Chr7:7146188-7146207 | MsG0780036367.01.T01:intron | 25.0% |
| ! | AGTAATATGACTCTTTAATG+TGG | - | Chr7:7147018-7147037 | MsG0780036367.01.T01:CDS | 25.0% |
| ! | ATACATCTAACAGCTTATTT+GGG | - | Chr7:7144395-7144414 | MsG0780036367.01.T01:intron | 25.0% |
| ! | ATATCTAAGTATGAGTACAT+GGG | - | Chr7:7146098-7146117 | MsG0780036367.01.T01:intron | 25.0% |
| ! | ATTCAAGTATAACTTAATCG+TGG | + | Chr7:7145923-7145942 | None:intergenic | 25.0% |
| ! | CAATACCAAATCAAATTTCT+TGG | - | Chr7:7145083-7145102 | MsG0780036367.01.T01:intron | 25.0% |
| ! | CATATCCTTTGTATATTTCA+AGG | + | Chr7:7146196-7146215 | None:intergenic | 25.0% |
| ! | CTAAATATATATACACCTTC+AGG | + | Chr7:7145374-7145393 | None:intergenic | 25.0% |
| ! | GAAATATACAAAGGATATGA+GGG | - | Chr7:7146197-7146216 | MsG0780036367.01.T01:intron | 25.0% |
| ! | TATCACTATCATCTATTTGT+GGG | + | Chr7:7143839-7143858 | None:intergenic | 25.0% |
| ! | TCGATATAGGATTAACTTTA+AGG | - | Chr7:7146028-7146047 | MsG0780036367.01.T01:intron | 25.0% |
| ! | TCTCACTATATTAACCATTT+GGG | - | Chr7:7145500-7145519 | MsG0780036367.01.T01:intron | 25.0% |
| ! | TGAAATATACAAAGGATATG+AGG | - | Chr7:7146196-7146215 | MsG0780036367.01.T01:intron | 25.0% |
| ! | TGCAAAATATCCATCAATTA+AGG | - | Chr7:7146277-7146296 | MsG0780036367.01.T01:intron | 25.0% |
| ! | TTCTCACTATATTAACCATT+TGG | - | Chr7:7145499-7145518 | MsG0780036367.01.T01:intron | 25.0% |
| !! | CATATTTCTTTTCGACTTTA+AGG | + | Chr7:7144496-7144515 | None:intergenic | 25.0% |
| !! | GATTCTTTTCATGTGAATTT+TGG | + | Chr7:7146174-7146193 | None:intergenic | 25.0% |
| !! | GCCTAATAAATCTTTTTGAT+TGG | + | Chr7:7145465-7145484 | None:intergenic | 25.0% |
| !! | TTGAATAATTGGTTTACTTG+TGG | + | Chr7:7146131-7146150 | None:intergenic | 25.0% |
| !!! | AGAACTCATGTTTTTTTCTT+TGG | + | Chr7:7143778-7143797 | None:intergenic | 25.0% |
| !!! | ATCATTATTTTGACAAGTCT+TGG | + | Chr7:7144652-7144671 | None:intergenic | 25.0% |
| !!! | CTCTTTTGTCTATTTCTAAT+CGG | - | Chr7:7144051-7144070 | MsG0780036367.01.T01:CDS | 25.0% |
| !!! | GAATAGTGCTTTTTTTAACT+AGG | - | Chr7:7145895-7145914 | MsG0780036367.01.T01:intron | 25.0% |
| !!! | TAACAAAAGTATTTACCAGA+AGG | + | Chr7:7144119-7144138 | None:intergenic | 25.0% |
| !!! | TTCAATCGTCATCATTTTTT+TGG | - | Chr7:7145752-7145771 | MsG0780036367.01.T01:intron | 25.0% |
| !!! | TTTTTGTTTGTAATAGTGAC+CGG | + | Chr7:7145311-7145330 | None:intergenic | 25.0% |
| AACTTATGATCCGTAAGATA+TGG | - | Chr7:7145792-7145811 | MsG0780036367.01.T01:intron | 30.0% | |
| ACACTCCAAGAAATTTGATT+TGG | + | Chr7:7145091-7145110 | None:intergenic | 30.0% | |
| ATCACTATCATCTATTTGTG+GGG | + | Chr7:7143838-7143857 | None:intergenic | 30.0% | |
| ATGTTTGAAAACATTCCACA+AGG | - | Chr7:7146492-7146511 | MsG0780036367.01.T01:intron | 30.0% | |
| ATTCTATGAAATATACACCG+AGG | + | Chr7:7145979-7145998 | None:intergenic | 30.0% | |
| GTATCACTATCATCTATTTG+TGG | + | Chr7:7143840-7143859 | None:intergenic | 30.0% | |
| TAAGAAAACCATAATCGAAC+TGG | + | Chr7:7144282-7144301 | None:intergenic | 30.0% | |
| TATGATGAAAATAGTGACCA+TGG | - | Chr7:7144137-7144156 | MsG0780036367.01.T01:CDS | 30.0% | |
| TCATGGTTTGAAGACTAATT+TGG | - | Chr7:7145434-7145453 | MsG0780036367.01.T01:intron | 30.0% | |
| TGCAAAAGAATATGAGAGTT+TGG | - | Chr7:7146867-7146886 | MsG0780036367.01.T01:CDS | 30.0% | |
| TGTTTATAATAGTGACCTGA+AGG | - | Chr7:7145356-7145375 | MsG0780036367.01.T01:intron | 30.0% | |
| TTTAGGCTGTATGTCATAAT+TGG | - | Chr7:7146668-7146687 | MsG0780036367.01.T01:CDS | 30.0% | |
| ! | AAGTTGATTGCCTTAATTGA+TGG | + | Chr7:7146290-7146309 | None:intergenic | 30.0% |
| ! | CTCAACTTGTTTGAAATCAT+TGG | - | Chr7:7143924-7143943 | MsG0780036367.01.T01:CDS | 30.0% |
| ! | TTGTTTGAAATCATTGGTGA+TGG | - | Chr7:7143930-7143949 | MsG0780036367.01.T01:CDS | 30.0% |
| ! | TTTTTGAATAAGTCAACCTC+CGG | + | Chr7:7146068-7146087 | None:intergenic | 30.0% |
| !! | ATCAGTTTTGTGATCGATAT+AGG | - | Chr7:7146015-7146034 | MsG0780036367.01.T01:intron | 30.0% |
| !! | TCTGTTTTTCACGAAAAACA+CGG | - | Chr7:7145407-7145426 | MsG0780036367.01.T01:intron | 30.0% |
| !!! | TGTTCACTTATTTTTGTTGC+CGG | + | Chr7:7145065-7145084 | None:intergenic | 30.0% |
| AAATGGAAAGGTCATTCTTG+TGG | - | Chr7:7146744-7146763 | MsG0780036367.01.T01:CDS | 35.0% | |
| AACTGCTGGAAACACTAAAT+TGG | + | Chr7:7143886-7143905 | None:intergenic | 35.0% | |
| AATAGTGACCATGGTTATCT+TGG | - | Chr7:7144146-7144165 | MsG0780036367.01.T01:CDS | 35.0% | |
| AATGCCGAATTCCAAACAAT+GGG | + | Chr7:7144793-7144812 | None:intergenic | 35.0% | |
| ACTCTTTAGCATTTCCCAAA+TGG | + | Chr7:7145517-7145536 | None:intergenic | 35.0% | |
| AGTGAGATGACCATATCTTA+CGG | + | Chr7:7145805-7145824 | None:intergenic | 35.0% | |
| ATCATGTTCATTAATGCTGG+TGG | - | Chr7:7146832-7146851 | MsG0780036367.01.T01:CDS | 35.0% | |
| ATGCCATAATGCTTAAGGTT+GGG | - | Chr7:7146517-7146536 | MsG0780036367.01.T01:intron | 35.0% | |
| CATATCACATTCCCATTGTT+TGG | - | Chr7:7144779-7144798 | MsG0780036367.01.T01:CDS | 35.0% | |
| GGTTTGAAGACTAATTTGGT+CGG | - | Chr7:7145438-7145457 | MsG0780036367.01.T01:intron | 35.0% | |
| GTAAACACACACACTATCAA+AGG | - | Chr7:7143736-7143755 | MsG0780036367.01.T01:three_prime_UTR | 35.0% | |
| GTAGCATAGTGAGTGTTTAT+GGG | - | Chr7:7144087-7144106 | MsG0780036367.01.T01:CDS | 35.0% | |
| TAACCCAACCTTAAGCATTA+TGG | + | Chr7:7146523-7146542 | None:intergenic | 35.0% | |
| TAAGTATGAGTACATGGGAA+AGG | - | Chr7:7146103-7146122 | MsG0780036367.01.T01:intron | 35.0% | |
| TAATGCCGAATTCCAAACAA+TGG | + | Chr7:7144794-7144813 | None:intergenic | 35.0% | |
| TGTTGTGCTTTCTCTATCAT+TGG | - | Chr7:7146925-7146944 | MsG0780036367.01.T01:CDS | 35.0% | |
| TGTTTCATTTCTACACTCTC+CGG | - | Chr7:7145289-7145308 | MsG0780036367.01.T01:intron | 35.0% | |
| TTTCCTAACAAGTGCTTTGA+GGG | + | Chr7:7145681-7145700 | None:intergenic | 35.0% | |
| TTTCTCTATCATTGGAGTGA+TGG | - | Chr7:7146933-7146952 | MsG0780036367.01.T01:CDS | 35.0% | |
| ! | AGAAAAGCTAACTTGTGTCA+AGG | - | Chr7:7144618-7144637 | MsG0780036367.01.T01:CDS | 35.0% |
| ! | AGAATGACCTTTCCATTTTG+AGG | + | Chr7:7146742-7146761 | None:intergenic | 35.0% |
| ! | CATTCCCATTGTTTGGAATT+CGG | - | Chr7:7144786-7144805 | MsG0780036367.01.T01:intron | 35.0% |
| ! | CATTTTCAATCACTTGAGGA+AGG | + | Chr7:7146316-7146335 | None:intergenic | 35.0% |
| ! | GATGCATTTTCAATCACTTG+AGG | + | Chr7:7146320-7146339 | None:intergenic | 35.0% |
| ! | TTTTCCTAACAAGTGCTTTG+AGG | + | Chr7:7145682-7145701 | None:intergenic | 35.0% |
| ! | TTTTTCACGAAAAACACGGT+GGG | - | Chr7:7145411-7145430 | MsG0780036367.01.T01:intron | 35.0% |
| ACTAAGGTCCAGTTCGATTA+TGG | - | Chr7:7144271-7144290 | MsG0780036367.01.T01:intron | 40.0% | |
| AGCTTTGCCTCAAAATGGAA+AGG | - | Chr7:7146732-7146751 | MsG0780036367.01.T01:CDS | 40.0% | |
| AGGAGATGCCATAATGCTTA+AGG | - | Chr7:7146512-7146531 | MsG0780036367.01.T01:intron | 40.0% | |
| ATATGAGGGAGTCTCAACTT+TGG | - | Chr7:7146211-7146230 | MsG0780036367.01.T01:intron | 40.0% | |
| ATGTGTCATCCTGCTTTGAT+AGG | - | Chr7:7144185-7144204 | MsG0780036367.01.T01:intron | 40.0% | |
| ATTGCAGCATTAAGAACTGC+TGG | + | Chr7:7143900-7143919 | None:intergenic | 40.0% | |
| ATTTGGTCCACTTGTCAAAC+TGG | + | Chr7:7145001-7145020 | None:intergenic | 40.0% | |
| CACAAAGCTTTGCCTCAAAA+TGG | - | Chr7:7146727-7146746 | MsG0780036367.01.T01:CDS | 40.0% | |
| CACTATGCTACCATCATCAT+TGG | + | Chr7:7144078-7144097 | None:intergenic | 40.0% | |
| CATTTAGGGATTGAGCATGT+TGG | - | Chr7:7146462-7146481 | MsG0780036367.01.T01:intron | 40.0% | |
| GAAAATGCATCACCCATTTC+AGG | - | Chr7:7146329-7146348 | MsG0780036367.01.T01:intron | 40.0% | |
| GATGCCATAATGCTTAAGGT+TGG | - | Chr7:7146516-7146535 | MsG0780036367.01.T01:intron | 40.0% | |
| GGTAGCATAGTGAGTGTTTA+TGG | - | Chr7:7144086-7144105 | MsG0780036367.01.T01:CDS | 40.0% | |
| TAAGGATGCAGTACTTGATC+CGG | - | Chr7:7146046-7146065 | MsG0780036367.01.T01:intron | 40.0% | |
| TAGTGATACACTCACAGCTA+TGG | - | Chr7:7143851-7143870 | MsG0780036367.01.T01:exon | 40.0% | |
| TCTAATCGGACCAATGATGA+TGG | - | Chr7:7144065-7144084 | MsG0780036367.01.T01:CDS | 40.0% | |
| TCTTGTGGCACATGTACTAT+TGG | - | Chr7:7146759-7146778 | MsG0780036367.01.T01:CDS | 40.0% | |
| TGAATGAGCCAAGATAACCA+TGG | + | Chr7:7144157-7144176 | None:intergenic | 40.0% | |
| TGTGTCATCCTGCTTTGATA+GGG | - | Chr7:7144186-7144205 | MsG0780036367.01.T01:intron | 40.0% | |
| TTCTTGATGGAGTCCCAAAT+TGG | - | Chr7:7145039-7145058 | MsG0780036367.01.T01:intron | 40.0% | |
| TTTGGTCCACTTGTCAAACT+GGG | + | Chr7:7145000-7145019 | None:intergenic | 40.0% | |
| ! | AACACTCTGATTTGCCGAAT+CGG | - | Chr7:7143994-7144013 | MsG0780036367.01.T01:CDS | 40.0% |
| ! | AAGGCTACAACAAGAGTACA+AGG | - | Chr7:7144917-7144936 | MsG0780036367.01.T01:intron | 40.0% |
| ! | AGAATGGAGCATCATTTCCT+CGG | - | Chr7:7145959-7145978 | MsG0780036367.01.T01:intron | 40.0% |
| ! | ATTTTTGTTGCCGGCCAATT+TGG | + | Chr7:7145056-7145075 | None:intergenic | 40.0% |
| ! | CTTGATGCATTTGTTGCTTC+TGG | + | Chr7:7146790-7146809 | None:intergenic | 40.0% |
| ! | GTCTCAACTTTGGTTGATGT+TGG | - | Chr7:7146221-7146240 | MsG0780036367.01.T01:intron | 40.0% |
| ! | GTTTTTCACGAAAAACACGG+TGG | - | Chr7:7145410-7145429 | MsG0780036367.01.T01:intron | 40.0% |
| ! | TCAACTTTGGTTGATGTTGG+AGG | - | Chr7:7146224-7146243 | MsG0780036367.01.T01:intron | 40.0% |
| ! | TTCCTAACAAGTGCTTTGAG+GGG | + | Chr7:7145680-7145699 | None:intergenic | 40.0% |
| ! | TTTTTGTTGCCGGCCAATTT+GGG | + | Chr7:7145055-7145074 | None:intergenic | 40.0% |
| !! | TACTCTTGTTGTAGCCTTGT+AGG | + | Chr7:7144915-7144934 | None:intergenic | 40.0% |
| ACACTCACAGCTATGGTACT+TGG | - | Chr7:7143858-7143877 | MsG0780036367.01.T01:exon | 45.0% | |
| AGCATTATGGCATCTCCTTG+TGG | + | Chr7:7146510-7146529 | None:intergenic | 45.0% | |
| ATCCTGCTTTGATAGGGTTG+TGG | - | Chr7:7144192-7144211 | MsG0780036367.01.T01:intron | 45.0% | |
| GGGTGTGAGATTCAATCACA+TGG | + | Chr7:7143818-7143837 | None:intergenic | 45.0% | |
| GTTGATGTTGGAGGTGGAAA+TGG | - | Chr7:7146233-7146252 | MsG0780036367.01.T01:intron | 45.0% | |
| GTTTATGGGATCACACCTTC+TGG | - | Chr7:7144101-7144120 | MsG0780036367.01.T01:CDS | 45.0% | |
| TACCACAACCCTATCAAAGC+AGG | + | Chr7:7144197-7144216 | None:intergenic | 45.0% | |
| TTAGGGATTGAGCATGTTGG+AGG | - | Chr7:7146465-7146484 | MsG0780036367.01.T01:intron | 45.0% | |
| TTGGTCCACTTGTCAAACTG+GGG | + | Chr7:7144999-7145018 | None:intergenic | 45.0% | |
| ! | ACTTTGGTTGATGTTGGAGG+TGG | - | Chr7:7146227-7146246 | MsG0780036367.01.T01:intron | 45.0% |
| !! | GGCAAATCAGAGTGTTGAGT+TGG | + | Chr7:7143990-7144009 | None:intergenic | 45.0% |
| !!! | AATACTAAAATAATATTTTA+AGG | + | Chr7:7144724-7144743 | None:intergenic | 5.0% |
| !!! | ATGTATTTTAATATTTATAT+CGG | + | Chr7:7144350-7144369 | None:intergenic | 5.0% |
| AACATACGCTCGAGCCGATT+CGG | + | Chr7:7144011-7144030 | None:intergenic | 50.0% | |
| ACGAAAAACACGGTGGGTCA+TGG | - | Chr7:7145417-7145436 | MsG0780036367.01.T01:intron | 50.0% | |
| TCCACTTGTCAAACTGGGGT+AGG | + | Chr7:7144995-7145014 | None:intergenic | 50.0% | |
| TCCTACCCCAGTTTGACAAG+TGG | - | Chr7:7144991-7145010 | MsG0780036367.01.T01:intron | 50.0% | |
| TGATGGAGTCCCAAATTGGC+CGG | - | Chr7:7145043-7145062 | MsG0780036367.01.T01:intron | 50.0% | |
| TGGCACAAGAGATGCCTACA+AGG | - | Chr7:7144898-7144917 | MsG0780036367.01.T01:intron | 50.0% | |
| ! | GAGAGTTTGGCTCAACGTTC+TGG | - | Chr7:7146880-7146899 | MsG0780036367.01.T01:CDS | 50.0% |
| ! | GTCCCCTCAAAGCACTTGTT+AGG | - | Chr7:7145675-7145694 | MsG0780036367.01.T01:intron | 50.0% |
| !! | CTGGGGTAGGAAGTTGATAC+CGG | + | Chr7:7144982-7145001 | None:intergenic | 50.0% |
| !! | TGCTTTGAGGGGACTTGCTA+AGG | + | Chr7:7145669-7145688 | None:intergenic | 50.0% |
| GGATGCAGTACTTGATCCGG+AGG | - | Chr7:7146049-7146068 | MsG0780036367.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 7143734 | 7147105 | 7143734 | ID=MsG0780036367.01;Name=MsG0780036367.01 |
| Chr7 | mRNA | 7143734 | 7147105 | 7143734 | ID=MsG0780036367.01.T01;Parent=MsG0780036367.01;Name=MsG0780036367.01.T01;_AED=0.19;_eAED=0.19;_QI=55|1|1|1|1|1|4|136|366 |
| Chr7 | exon | 7143734 | 7144166 | 7143734 | ID=MsG0780036367.01.T01:exon:3824;Parent=MsG0780036367.01.T01 |
| Chr7 | exon | 7144306 | 7144370 | 7144306 | ID=MsG0780036367.01.T01:exon:3823;Parent=MsG0780036367.01.T01 |
| Chr7 | exon | 7144489 | 7144802 | 7144489 | ID=MsG0780036367.01.T01:exon:3822;Parent=MsG0780036367.01.T01 |
| Chr7 | exon | 7146626 | 7147105 | 7146626 | ID=MsG0780036367.01.T01:exon:3821;Parent=MsG0780036367.01.T01 |
| Chr7 | five_prime_UTR | 7147051 | 7147105 | 7147051 | ID=MsG0780036367.01.T01:five_prime_utr;Parent=MsG0780036367.01.T01 |
| Chr7 | CDS | 7146626 | 7147050 | 7146626 | ID=MsG0780036367.01.T01:cds;Parent=MsG0780036367.01.T01 |
| Chr7 | CDS | 7144489 | 7144802 | 7144489 | ID=MsG0780036367.01.T01:cds;Parent=MsG0780036367.01.T01 |
| Chr7 | CDS | 7144306 | 7144370 | 7144306 | ID=MsG0780036367.01.T01:cds;Parent=MsG0780036367.01.T01 |
| Chr7 | CDS | 7143870 | 7144166 | 7143870 | ID=MsG0780036367.01.T01:cds;Parent=MsG0780036367.01.T01 |
| Chr7 | three_prime_UTR | 7143734 | 7143869 | 7143734 | ID=MsG0780036367.01.T01:three_prime_utr;Parent=MsG0780036367.01.T01 |
| Gene Sequence |
| Protein sequence |
