AlfalfaGEDB | MsG0480018963.01

M. sativa cultivar ZhongmuNo.1 / MsG0480018963.01

KEGG: -
GO: GO:0005524
PFAM: PF00004

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018963.01.T01	XP_003604901.1	98.529	476	7	0	1	476	1	476	0	975

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018963.01.T01	Q7X9A0	81.837	479	81	5	1	476	1	476	0	808

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018963.01.T01	G7JTD2	98.529	476	7	0	1	476	1	476	0.0	975

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048669.01	MsG0480018963.01	0.844506	7.246169e-59	1.172375e-55
MsG0080049062.01	MsG0480018963.01	0.802358	5.828059e-49	2.849184e-46
MsG0180000467.01	MsG0480018963.01	0.812917	3.329795e-51	2.143969e-48
MsG0180003351.01	MsG0480018963.01	0.806600	7.603537e-50	4.144017e-47
MsG0180003985.01	MsG0480018963.01	0.801022	1.095149e-48	5.175831e-46
MsG0180004553.01	MsG0480018963.01	0.805962	1.036128e-49	5.556115e-47
MsG0180004747.01	MsG0480018963.01	0.803530	3.336202e-49	1.680575e-46
MsG0380013506.01	MsG0480018963.01	0.824767	6.752707e-54	6.038885e-51
MsG0480018963.01	MsG0480021205.01	0.814199	1.739954e-51	1.159914e-48
MsG0480018963.01	MsG0480021667.01	0.808995	2.354820e-50	1.366278e-47
MsG0480018963.01	MsG0480022436.01	0.824718	6.933618e-54	6.192087e-51
MsG0480018963.01	MsG0480022437.01	0.843574	1.288413e-58	2.024571e-55
MsG0480018963.01	MsG0480023217.01	0.827967	1.167332e-54	1.144524e-51
MsG0480018963.01	MsG0580024442.01	0.811089	8.335125e-51	5.112263e-48
MsG0480018963.01	MsG0580024678.01	0.803092	4.111661e-49	2.047788e-46
MsG0480018963.01	MsG0580024875.01	0.809456	1.875248e-50	1.101536e-47
MsG0480018963.01	MsG0580025105.01	0.829106	6.195383e-55	6.279171e-52
MsG0480018963.01	MsG0580025259.01	0.812596	3.915000e-51	2.499608e-48
MsG0480018963.01	MsG0580025392.01	0.827743	1.321675e-54	1.287289e-51
MsG0480018963.01	MsG0580030197.01	0.805415	1.349922e-49	7.137508e-47
MsG0480018963.01	MsG0680030439.01	0.803599	3.228603e-49	1.629228e-46
MsG0480018963.01	MsG0680030658.01	0.807390	5.175458e-50	2.879074e-47
MsG0480018963.01	MsG0780036067.01	0.803454	3.459563e-49	1.739200e-46
MsG0480018963.01	MsG0780036068.01	0.808972	2.381537e-50	1.380931e-47
MsG0480018963.01	MsG0780039821.01	0.801677	8.041987e-49	3.863736e-46
MsG0480018963.01	MsG0780040121.01	0.801622	8.255256e-49	3.960605e-46
MsG0480018963.01	MsG0780041478.01	0.814363	1.600695e-51	1.071861e-48
MsG0480018963.01	MsG0780041625.01	0.836690	8.073782e-57	1.025200e-53
MsG0480018963.01	MsG0780041809.01	0.806763	7.023814e-50	3.844182e-47
MsG0480018963.01	MsG0880041855.01	0.809729	1.638467e-50	9.695108e-48
MsG0480018963.01	MsG0880045778.01	0.817790	2.747441e-52	2.020248e-49
MsG0480018963.01	MsG0880046150.01	0.818273	2.136146e-52	1.591636e-49
MsG0480018963.01	MsG0880046219.01	0.801741	7.803914e-49	3.755353e-46
MsG0480018963.01	MsG0880046341.01	0.800134	1.662273e-48	7.680475e-46
MsG0380015348.01	MsG0480018963.01	0.804058	2.592177e-49	1.323611e-46
MsG0380015439.01	MsG0480018963.01	0.836211	1.068759e-56	1.337947e-53
MsG0380015654.01	MsG0480018963.01	0.803097	4.101808e-49	2.043162e-46
MsG0380016166.01	MsG0480018963.01	0.812296	4.552271e-51	2.883486e-48
MsG0380016241.01	MsG0480018963.01	0.837567	4.815459e-57	6.280227e-54
MsG0380017406.01	MsG0480018963.01	0.802577	5.251342e-49	2.581441e-46
MsG0380017812.01	MsG0480018963.01	0.800925	1.146276e-48	5.403981e-46
MsG0380017895.01	MsG0480018963.01	0.813409	2.597991e-51	1.695292e-48
MsG0380017962.01	MsG0480018963.01	0.809184	2.144667e-50	1.250740e-47
MsG0480018190.01	MsG0480018963.01	0.813575	2.388572e-51	1.565644e-48
MsG0280007247.01	MsG0480018963.01	0.823035	1.719980e-53	1.464321e-50
MsG0280007288.01	MsG0480018963.01	0.807148	5.821792e-50	3.218266e-47
MsG0280007291.01	MsG0480018963.01	0.806022	1.006539e-49	5.405755e-47
MsG0280007649.01	MsG0480018963.01	0.803063	4.167521e-49	2.074120e-46
MsG0280007650.01	MsG0480018963.01	0.803463	3.444217e-49	1.731940e-46
MsG0280009008.01	MsG0480018963.01	0.808779	2.619180e-50	1.510897e-47
MsG0280009541.01	MsG0480018963.01	0.848054	7.823688e-60	1.417935e-56
MsG0280009776.01	MsG0480018963.01	0.807400	5.148475e-50	2.864889e-47
MsG0280010149.01	MsG0480018963.01	0.805979	1.027506e-49	5.512328e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018963.01.T01	MTR_4g021210	98.529	476	7	0	1	476	1	476	0.0	975
MsG0480018963.01.T01	MTR_5g080450	81.933	476	85	1	1	476	1	475	0.0	830
MsG0480018963.01.T01	MTR_3g068030	82.192	438	75	3	1	437	1	436	0.0	749
MsG0480018963.01.T01	MTR_3g068030	83.452	423	68	2	16	437	1	422	0.0	739
MsG0480018963.01.T01	MTR_2g105480	54.110	292	127	6	134	419	123	413	2.80e-109	330
MsG0480018963.01.T01	MTR_2g105480	60.262	229	87	4	134	359	123	350	4.00e-97	296
MsG0480018963.01.T01	MTR_2g105480	65.730	178	57	4	134	308	123	299	1.17e-76	243
MsG0480018963.01.T01	MTR_0373s0020	96.429	28	1	0	439	466	11	38	2.61e-12	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018963.01.T01	AT2G39730	78.826	477	97	2	1	476	1	474	0.0	787
MsG0480018963.01.T01	AT2G39730	77.852	447	95	2	1	446	1	444	0.0	726
MsG0480018963.01.T01	AT2G39730	78.685	441	90	2	1	440	1	438	0.0	724
MsG0480018963.01.T01	AT1G73110	51.724	319	145	7	107	419	15	330	2.44e-110	330
MsG0480018963.01.T01	AT1G73110	52.564	312	139	7	114	419	119	427	2.33e-109	331

Find 143 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTATATTGCACCTGCATTTA+TGG	0.088800	4:-12539527	MsG0480018963.01.T01:CDS
TATTAAGATTCCTCTCATTT+TGG	0.116167	4:-12539458	MsG0480018963.01.T01:CDS
CATGCGTCCATCACGAATTA+AGG	0.178930	4:+12538881	None:intergenic
ATGAGAGGAATCTTAATATT+TGG	0.205578	4:+12539463	None:intergenic
GAAGGATCAGCGCAACCTTC+TGG	0.214695	4:+12537971	None:intergenic
TCTCCGGCACTCATCATTAT+AGG	0.240969	4:+12539203	None:intergenic
TAATCTTACCAAACTTGTTT+TGG	0.278611	4:-12541199	MsG0480018963.01.T01:five_prime_UTR
TTCCAAAGCATATATTATAA+TGG	0.291877	4:-12541174	MsG0480018963.01.T01:exon
TGCCATTATAATATATGCTT+TGG	0.301721	4:+12541172	None:intergenic
TGCATTAATCTCAGCACTTT+AGG	0.313545	4:-12537788	MsG0480018963.01.T01:three_prime_UTR
TTGTACCTGTGCCATGTTAA+TGG	0.318352	4:+12541127	None:intergenic
TTGGAAAACCAAAACAAGTT+TGG	0.320731	4:+12541191	None:intergenic
TGATATGTTCAGGTACAATA+TGG	0.328301	4:-12539569	MsG0480018963.01.T01:intron
CTTTGCCTAATCAACTTTGC+AGG	0.332302	4:+12539155	None:intergenic
AATGCACCTTACATAAAATA+TGG	0.337542	4:+12537805	None:intergenic
TCGCGGAACTCGCTTTCTTA+AGG	0.339271	4:+12540342	None:intergenic
AGCTTGTCAATAGTCATCTT+TGG	0.340251	4:+12538293	None:intergenic
CTTAAGTGAGTACATAAATA+TGG	0.341458	4:-12537881	MsG0480018963.01.T01:three_prime_UTR
TCATTGCCAGTGACGATGAT+AGG	0.347209	4:+12538924	None:intergenic
TCTTTGCCAAGATGGGAATA+AGG	0.350452	4:-12539387	MsG0480018963.01.T01:intron
GCAACTTCCATCGTCACTTC+TGG	0.351528	4:+12537925	None:intergenic
TGAGGTATCTGTCGGCTAAC+TGG	0.354729	4:+12538219	None:intergenic
AATGATGAGTGCCGGAGAAT+TGG	0.354739	4:-12539198	MsG0480018963.01.T01:CDS
ATCAAGACTGGAAACTTCTA+TGG	0.360535	4:-12538161	MsG0480018963.01.T01:intron
TCCAGCCCATCTGTCCTTTG+AGG	0.369839	4:+12540247	None:intergenic
GGGCGCCTACTCGTGATGAT+AGG	0.379460	4:-12538845	MsG0480018963.01.T01:CDS
ATTGACAAGCTACTAGAGTA+TGG	0.384668	4:-12538281	MsG0480018963.01.T01:CDS
GTCCACCTTTCCCTTTCCTC+TGG	0.384827	4:+12540187	None:intergenic
CTCTTCTTTGTTGTACATAC+CGG	0.388448	4:+12538959	None:intergenic
AATTACCAGACAAACTCTTC+TGG	0.388595	4:+12540312	None:intergenic
CTCCGGCACTCATCATTATA+GGG	0.391535	4:+12539204	None:intergenic
AAGGATCAGCGCAACCTTCT+GGG	0.407555	4:+12537972	None:intergenic
GAACTGAGTTCCAAAGTGAT+TGG	0.408253	4:+12541242	None:intergenic
CCTACCAATGTTCAACTTCC+CGG	0.413313	4:-12538978	MsG0480018963.01.T01:CDS
AAGATTGTCGACACATTCCC+TGG	0.416886	4:-12538765	MsG0480018963.01.T01:CDS
ATCTTTGGTTGCTCAAAAGT+TGG	0.417648	4:+12538308	None:intergenic
GCAACTTCTGTGACAATTGT+TGG	0.420971	4:-12541152	MsG0480018963.01.T01:CDS
TGAGGGTTGCATTTACCATC+TGG	0.421559	4:+12539018	None:intergenic
ATTTCCACTTTCCAATTCTC+CGG	0.426624	4:+12539187	None:intergenic
GAAGTCAGGAATTGGATATC+TGG	0.433568	4:-12538383	MsG0480018963.01.T01:CDS
GAGAGCCTGCAAAGTTGATT+AGG	0.436687	4:-12539160	MsG0480018963.01.T01:CDS
TACCTCAGTGAGGCTGCTCT+TGG	0.438518	4:-12538203	MsG0480018963.01.T01:CDS
ATGACGATGAAGTCAGGAAT+TGG	0.439434	4:-12538391	MsG0480018963.01.T01:CDS
TCCAGCCAGAAGAGTTTGTC+TGG	0.441643	4:-12540317	MsG0480018963.01.T01:CDS
AATATGGACAACACAATAGA+TGG	0.441782	4:-12539553	MsG0480018963.01.T01:CDS
CATCGTCACTTCTGGCTGTC+GGG	0.442366	4:+12537933	None:intergenic
CCATCGTCACTTCTGGCTGT+CGG	0.449350	4:+12537932	None:intergenic
ATCTTGACAATGTCATCCTT+AGG	0.455344	4:+12538783	None:intergenic
TCAACTTAATCCAATCACTT+TGG	0.459675	4:-12541252	MsG0480018963.01.T01:five_prime_UTR
CAGGATATCACCAGAGGAAA+GGG	0.467193	4:-12540197	MsG0480018963.01.T01:CDS
CAACCTTCTGGGACAGGTAA+AGG	0.470524	4:+12537983	None:intergenic
ACATTCCCTGGACAGTCAAT+TGG	0.470564	4:-12538753	MsG0480018963.01.T01:intron
TATGTGCAGTTGAAATTGAA+TGG	0.472948	4:-12540413	MsG0480018963.01.T01:intron
GGCTTACCAATTGACTGTCC+AGG	0.479453	4:+12538747	None:intergenic
ACCTCAAAGGACAGATGGGC+TGG	0.482103	4:-12540248	MsG0480018963.01.T01:CDS
TTGGGCATTTGGGGAGGCAA+AGG	0.485012	4:-12539439	MsG0480018963.01.T01:CDS
TTCCTCTGGTGATATCCTGT+TGG	0.486672	4:+12540201	None:intergenic
GCGTCCGACATTATCAGAAA+AGG	0.491800	4:-12539122	MsG0480018963.01.T01:CDS
TTCATCAATGATCTTGATGC+AGG	0.493471	4:-12539083	MsG0480018963.01.T01:CDS
GAGTGTATGACGATGAAGTC+AGG	0.497686	4:-12538397	MsG0480018963.01.T01:CDS
CCGGGAAGTTGAACATTGGT+AGG	0.497705	4:+12538978	None:intergenic
TTTGGTTGCTCAAAAGTTGG+AGG	0.500397	4:+12538311	None:intergenic
TTGTTATTGATGGTGTCCTA+TGG	0.500769	4:-12537754	MsG0480018963.01.T01:three_prime_UTR
CAGTGTCTTTCAAGCTCCAA+TGG	0.501662	4:-12540165	MsG0480018963.01.T01:CDS
TGACACCTCAGATGACCAAC+AGG	0.501897	4:-12540216	MsG0480018963.01.T01:CDS
TTTCAAGCTCCAATGGATGC+TGG	0.504462	4:-12540158	MsG0480018963.01.T01:CDS
ACCAACTTACTGGCGAAGAC+CGG	0.505874	4:+12540094	None:intergenic
CATCTTATAGAAAGCAATGT+TGG	0.509991	4:-12537707	MsG0480018963.01.T01:three_prime_UTR
TTGGTCATCTGAGGTGTCAT+AGG	0.510724	4:+12540220	None:intergenic
AATGATGATGCTATCAAGAC+TGG	0.511092	4:-12538173	MsG0480018963.01.T01:CDS
GGCGCCTACTCGTGATGATA+GGG	0.511511	4:-12538844	MsG0480018963.01.T01:CDS
TCCTATGATTATATCAGTAC+CGG	0.513038	4:-12540113	MsG0480018963.01.T01:CDS
ATGCGTCCATCACGAATTAA+GGG	0.513590	4:+12538882	None:intergenic
CAGGACAGATGGGGTCCCTA+AGG	0.516866	4:-12538799	MsG0480018963.01.T01:CDS
TCAGCGCAACCTTCTGGGAC+AGG	0.517907	4:+12537977	None:intergenic
TCTTGACAATGTCATCCTTA+GGG	0.521614	4:+12538784	None:intergenic
AGCAGACCTCAAAGGACAGA+TGG	0.523593	4:-12540253	MsG0480018963.01.T01:CDS
AGGAATTGGATATCTGGTAT+TGG	0.523666	4:-12538377	MsG0480018963.01.T01:CDS
ACGAATTAAGGGAGCATACA+AGG	0.524450	4:+12538893	None:intergenic
ACCAGACAAACTCTTCTGGC+TGG	0.530162	4:+12540316	None:intergenic
CGTGTCCCTATCATCGTCAC+TGG	0.534166	4:-12538930	MsG0480018963.01.T01:CDS
AAGACTTGTGAATTCAAAAG+AGG	0.535398	4:-12538336	MsG0480018963.01.T01:CDS
TGATAATGTCGGACGCCTCA+CGG	0.537380	4:+12539129	None:intergenic
AATGATCTTGATGCAGGAGC+TGG	0.538362	4:-12539077	MsG0480018963.01.T01:CDS
CATTGCCAGTGACGATGATA+GGG	0.540834	4:+12538925	None:intergenic
AATCAACTTTGCAGGCTCTC+CGG	0.542852	4:+12539163	None:intergenic
TGAGCTTGTCTTTGCCAAGA+TGG	0.545502	4:-12539395	MsG0480018963.01.T01:CDS
GATGCAGGAGCTGGTAGAAT+GGG	0.546512	4:-12539068	MsG0480018963.01.T01:CDS
TTGAGTTGATAGAAAGAGAG+AGG	0.547490	4:+12541271	None:intergenic
TATGCTCCCTTAATTCGTGA+TGG	0.548955	4:-12538888	MsG0480018963.01.T01:CDS
ACCGGTACTGATATAATCAT+AGG	0.550230	4:+12540112	None:intergenic
GGTATTGGTGTGGAGAGTAT+TGG	0.554129	4:-12538362	MsG0480018963.01.T01:CDS
AATTCTCAAAACTCAACCAT+AGG	0.555746	4:+12537738	None:intergenic
GCTTACCAATTGACTGTCCA+GGG	0.556345	4:+12538748	None:intergenic
GATAGAAAGAGAGAGGTGAG+AGG	0.557033	4:+12541278	None:intergenic
AAGAACAAGAGAATGTGAAG+AGG	0.557104	4:-12538244	MsG0480018963.01.T01:CDS
GAATTGGAAAGTGGAAATGC+CGG	0.558234	4:-12539182	MsG0480018963.01.T01:CDS
TAGTGAGTTCCAGCATCCAT+TGG	0.558625	4:+12540149	None:intergenic
ACAGGATATCACCAGAGGAA+AGG	0.560580	4:-12540198	MsG0480018963.01.T01:CDS
ATTTGGGGAGGCAAAGGTCA+AGG	0.561672	4:-12539433	MsG0480018963.01.T01:CDS
ACAAGCTTGTCCATAAATGC+AGG	0.573184	4:+12539517	None:intergenic
TGATGCAGGAGCTGGTAGAA+TGG	0.573216	4:-12539069	MsG0480018963.01.T01:CDS
ACTCTTCTGGCTGGAAATCG+CGG	0.577441	4:+12540325	None:intergenic
GGTTGTCAGCAATGTTCATG+AGG	0.579374	4:+12539000	None:intergenic
TCTTCTTTGTTGTACATACC+GGG	0.579969	4:+12538960	None:intergenic
GTTCCTTTACCTGTCCCAGA+AGG	0.583970	4:-12537986	MsG0480018963.01.T01:CDS
GTCATACACTCTAGCCCTCA+AGG	0.585052	4:+12538409	None:intergenic
AGCCCTATAATGATGAGTGC+CGG	0.586108	4:-12539206	MsG0480018963.01.T01:CDS
CGGGAAGTTGAACATTGGTA+GGG	0.586332	4:+12538979	None:intergenic
CTTAATTCGTGATGGACGCA+TGG	0.586707	4:-12538880	MsG0480018963.01.T01:CDS
CCCCAAATGCCCAAAATGAG+AGG	0.592582	4:+12539448	None:intergenic
AGATGATTGTGCAAAATGAA+AGG	0.592889	4:+12537670	None:intergenic
TTGGATATCTGGTATTGGTG+TGG	0.595454	4:-12538372	MsG0480018963.01.T01:CDS
GAGCTTGTCTTTGCCAAGAT+GGG	0.595810	4:-12539394	MsG0480018963.01.T01:CDS
GCAGACCTCAAAGGACAGAT+GGG	0.599753	4:-12540252	MsG0480018963.01.T01:CDS
TGGAGCCATTAACATGGCAC+AGG	0.599758	4:-12541132	MsG0480018963.01.T01:intron
GATATCCTGTTGGTCATCTG+AGG	0.602459	4:+12540211	None:intergenic
AAATTGAATGGTTCTAGCAA+TGG	0.604388	4:-12540401	MsG0480018963.01.T01:CDS
GTTGTCAGCAATGTTCATGA+GGG	0.605287	4:+12539001	None:intergenic
AGACTTGTGAATTCAAAAGA+GGG	0.610232	4:-12538335	MsG0480018963.01.T01:CDS
GATAGGGTTGGTGTTTGTCA+AGG	0.612009	4:-12538828	MsG0480018963.01.T01:CDS
AGAACAAGAGAATGTGAAGA+GGG	0.613350	4:-12538243	MsG0480018963.01.T01:CDS
AATTGTTGGAGCCATTAACA+TGG	0.617506	4:-12541138	MsG0480018963.01.T01:CDS
AGCCTCACTGAGGTATCTGT+CGG	0.619009	4:+12538211	None:intergenic
CACCAGAGGAAAGGGAAAGG+TGG	0.620977	4:-12540189	MsG0480018963.01.T01:CDS
CAGTGACGATGATAGGGACA+CGG	0.622622	4:+12538931	None:intergenic
AGTGCCGGAGAATTGGAAAG+TGG	0.623122	4:-12539191	MsG0480018963.01.T01:CDS
CTGCAAAGTTGATTAGGCAA+AGG	0.623429	4:-12539154	MsG0480018963.01.T01:CDS
CCTACTCGTGATGATAGGGT+TGG	0.628308	4:-12538840	MsG0480018963.01.T01:CDS
TGATTGTGCAAAATGAAAGG+AGG	0.628397	4:+12537673	None:intergenic
TGAGGAGAAGCAGACCTCAA+AGG	0.633145	4:-12540261	MsG0480018963.01.T01:CDS
CCGACAGCCAGAAGTGACGA+TGG	0.643409	4:-12537932	MsG0480018963.01.T01:CDS
CATACCGGGAAGTTGAACAT+TGG	0.657559	4:+12538974	None:intergenic
AGTGACGATGATAGGGACAC+GGG	0.662449	4:+12538932	None:intergenic
TATCACCAGAGGAAAGGGAA+AGG	0.664919	4:-12540192	MsG0480018963.01.T01:CDS
ATACACAGTCAATAACCAGA+TGG	0.667649	4:-12539033	MsG0480018963.01.T01:CDS
CCAACCCTATCATCACGAGT+AGG	0.671567	4:+12538840	None:intergenic
GCAGGAGCTGGTAGAATGGG+TGG	0.672116	4:-12539065	MsG0480018963.01.T01:CDS
TGAAGAAAGTTAAAGCTGAG+TGG	0.675239	4:+12541318	None:intergenic
GACCAACAGGATATCACCAG+AGG	0.697074	4:-12540203	MsG0480018963.01.T01:CDS
CTCCAAGAGCAGCCTCACTG+AGG	0.729949	4:+12538201	None:intergenic
GATTAGGCAAAGGTACCGTG+AGG	0.742836	4:-12539144	MsG0480018963.01.T01:CDS
AGCCGACAGATACCTCAGTG+AGG	0.772523	4:-12538213	MsG0480018963.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAAAGTATATATTATACAT+AGG	-	Chr4:12538210-12538229	MsG0480018963.01.T01:CDS	10.0%
!!!	TTAAATTTTGAATTATTTTG+AGG	-	Chr4:12539318-12539337	MsG0480018963.01.T01:intron	10.0%
!!	ACTATATACTTAGAAAAATT+TGG	-	Chr4:12538042-12538061	MsG0480018963.01.T01:intron	15.0%
!!	CATGGTTAATAATAAATATA+AGG	+	Chr4:12540536-12540555	None:intergenic	15.0%
!!	TAATAGATATTTGTATCAAT+TGG	+	Chr4:12539134-12539153	None:intergenic	15.0%
!!	TTAAAAAAATATATTGGGAA+GGG	+	Chr4:12538193-12538212	None:intergenic	15.0%
!!	TTTAAAAAAATATATTGGGA+AGG	+	Chr4:12538194-12538213	None:intergenic	15.0%
!!!	ATGCTAATTTACTTATTTTT+AGG	-	Chr4:12539044-12539063	MsG0480018963.01.T01:CDS	15.0%
!!!	TATTGAATTTTAAGAAGAAA+TGG	+	Chr4:12537820-12537839	None:intergenic	15.0%
!!!	TGTATATTTTTTGTTATTGA+TGG	-	Chr4:12541273-12541292	MsG0480018963.01.T01:five_prime_UTR	15.0%
!!!	TTTTCTGTTATTATCTTAAA+AGG	-	Chr4:12540912-12540931	MsG0480018963.01.T01:intron	15.0%
!!	AAACAATAAGATAACATTCT+TGG	+	Chr4:12541006-12541025	None:intergenic	20.0%
!!	AAGAATGTTATCTTATTGTT+TGG	-	Chr4:12541005-12541024	MsG0480018963.01.T01:intron	20.0%
!!	AATCTTTGTTAACTGAATTA+AGG	+	Chr4:12538973-12538992	None:intergenic	20.0%
!!	ATAAATATAAGGATCTTGTT+TGG	+	Chr4:12540525-12540544	None:intergenic	20.0%
!!	GATAATAACAGAAAAATCAA+AGG	+	Chr4:12540907-12540926	None:intergenic	20.0%
!!	TGATATTCTAGGTTATAATA+TGG	-	Chr4:12539349-12539368	MsG0480018963.01.T01:intron	20.0%
!!	TTCCAAAGCATATATTATAA+TGG	-	Chr4:12537863-12537882	MsG0480018963.01.T01:three_prime_UTR	20.0%
!!!	ATTTTGAATTATTTTGAGGT+TGG	-	Chr4:12539322-12539341	MsG0480018963.01.T01:intron	20.0%
!!!	CATTTCTTTGTAGATTTTTT+TGG	-	Chr4:12540603-12540622	MsG0480018963.01.T01:intron	20.0%
!!!	GTACTAATTTTCATTCAATT+TGG	-	Chr4:12538561-12538580	MsG0480018963.01.T01:intron	20.0%
!!!	TTCCTGTATTATTTGATTTA+TGG	-	Chr4:12539294-12539313	MsG0480018963.01.T01:intron	20.0%
!!!	TTTACTTATTTTTAGGTACA+TGG	-	Chr4:12539051-12539070	MsG0480018963.01.T01:CDS	20.0%
!	AAAAATGCTGAATTTGTCAA+AGG	+	Chr4:12538666-12538685	None:intergenic	25.0%
!	AAGGTAAAAAGAAATTTGAC+AGG	-	Chr4:12539669-12539688	MsG0480018963.01.T01:intron	25.0%
!	AATGCACCTTACATAAAATA+TGG	+	Chr4:12541235-12541254	None:intergenic	25.0%
!	AGCCATAAATCAAATAATAC+AGG	+	Chr4:12539299-12539318	None:intergenic	25.0%
!	ATGAGAGGAATCTTAATATT+TGG	+	Chr4:12539577-12539596	None:intergenic	25.0%
!	CTTAAGTGAGTACATAAATA+TGG	-	Chr4:12541156-12541175	MsG0480018963.01.T01:CDS	25.0%
!	GTATCTATTTGTGTGTTAAT+AGG	-	Chr4:12538265-12538284	MsG0480018963.01.T01:CDS	25.0%
!	TATCAGTATCTTACGATATA+TGG	-	Chr4:12539075-12539094	MsG0480018963.01.T01:CDS	25.0%
!	TGCCATTATAATATATGCTT+TGG	+	Chr4:12537868-12537887	None:intergenic	25.0%
!	TTGAAACTTAGATTGATGTA+TGG	+	Chr4:12540314-12540333	None:intergenic	25.0%
!!	ATGCTTTTCTTAACAAACTT+TGG	-	Chr4:12537932-12537951	MsG0480018963.01.T01:CDS	25.0%
!!	ATTAAGATTCCTCTCATTTT+GGG	-	Chr4:12539580-12539599	MsG0480018963.01.T01:intron	25.0%
!!	CTTTCACCATATTTTATGTA+AGG	-	Chr4:12541226-12541245	MsG0480018963.01.T01:five_prime_UTR	25.0%
!!	TACGTAAATTGATAACACTT+CGG	+	Chr4:12539016-12539035	None:intergenic	25.0%
!!	TATTAAGATTCCTCTCATTT+TGG	-	Chr4:12539579-12539598	MsG0480018963.01.T01:intron	25.0%
!!!	AGTCAAAATTTCTAGTTACT+AGG	-	Chr4:12540333-12540352	MsG0480018963.01.T01:CDS	25.0%
!!!	GTCAAAATTTCTAGTTACTA+GGG	-	Chr4:12540334-12540353	MsG0480018963.01.T01:CDS	25.0%
!!!	TAATCTTACCAAACTTGTTT+TGG	-	Chr4:12537838-12537857	MsG0480018963.01.T01:three_prime_UTR	25.0%
!!!	TTGACAAATTCAGCATTTTT+TGG	-	Chr4:12538666-12538685	MsG0480018963.01.T01:intron	25.0%
	AACTCTTTGATCTACTTCTT+TGG	-	Chr4:12539803-12539822	MsG0480018963.01.T01:intron	30.0%
	AAGACTTGTGAATTCAAAAG+AGG	-	Chr4:12540701-12540720	MsG0480018963.01.T01:intron	30.0%
	AATATGGACAACACAATAGA+TGG	-	Chr4:12539484-12539503	MsG0480018963.01.T01:CDS	30.0%
	AATCTGGATTTGATATGTTC+AGG	-	Chr4:12539458-12539477	MsG0480018963.01.T01:CDS	30.0%
	AATGATCTGAAAACAGCTTA+TGG	+	Chr4:12540432-12540451	None:intergenic	30.0%
	AATTCTCAAAACTCAACCAT+AGG	+	Chr4:12541302-12541321	None:intergenic	30.0%
	ACGCATGGAAAAATTCTATT+GGG	-	Chr4:12540172-12540191	MsG0480018963.01.T01:CDS	30.0%
	AGACTTGTGAATTCAAAAGA+GGG	-	Chr4:12540702-12540721	MsG0480018963.01.T01:intron	30.0%
	CACACAAATAGATACATAGA+AGG	+	Chr4:12538260-12538279	None:intergenic	30.0%
	CATCTTATAGAAAGCAATGT+TGG	-	Chr4:12541330-12541349	MsG0480018963.01.T01:five_prime_UTR	30.0%
	CTTGATTAGCAGTAAGAATA+TGG	-	Chr4:12538087-12538106	MsG0480018963.01.T01:intron	30.0%
	GGCAAAAATTGACTATAATG+AGG	-	Chr4:12538758-12538777	MsG0480018963.01.T01:CDS	30.0%
	GTGTTATCAATTTACGTACT+TGG	-	Chr4:12539018-12539037	MsG0480018963.01.T01:CDS	30.0%
	TATGTGCAGTTGAAATTGAA+TGG	-	Chr4:12538624-12538643	MsG0480018963.01.T01:intron	30.0%
	TCAACTTAATCCAATCACTT+TGG	-	Chr4:12537785-12537804	MsG0480018963.01.T01:three_prime_UTR	30.0%
	TCCTATGATTATATCAGTAC+CGG	-	Chr4:12538924-12538943	MsG0480018963.01.T01:CDS	30.0%
	TGATATGTTCAGGTACAATA+TGG	-	Chr4:12539468-12539487	MsG0480018963.01.T01:CDS	30.0%
	TTATCTTATTGTTTGGATGC+AGG	-	Chr4:12541012-12541031	MsG0480018963.01.T01:intron	30.0%
	TTGGAAAACCAAAACAAGTT+TGG	+	Chr4:12537849-12537868	None:intergenic	30.0%
	TTTGATTCACGATTTGAATC+TGG	-	Chr4:12539442-12539461	MsG0480018963.01.T01:CDS	30.0%
!	ATGACTCCTTCTGAATTTTA+GGG	-	Chr4:12538511-12538530	MsG0480018963.01.T01:intron	30.0%
!	ATTTGGAGTTCATGGTTAAT+TGG	-	Chr4:12538578-12538597	MsG0480018963.01.T01:intron	30.0%
!	CTATGCAAGATTTTAGATTG+TGG	-	Chr4:12538310-12538329	MsG0480018963.01.T01:CDS	30.0%
!	GAGTTTGTCTGGTAATTTTA+AGG	-	Chr4:12538731-12538750	MsG0480018963.01.T01:intron	30.0%
!	TTAACAAAGATTTGAAGCTC+AGG	-	Chr4:12538981-12539000	MsG0480018963.01.T01:CDS	30.0%
!	TTCATTCAATTTGGAGTTCA+TGG	-	Chr4:12538570-12538589	MsG0480018963.01.T01:intron	30.0%
!	TTTGGAGTTCATGGTTAATT+GGG	-	Chr4:12538579-12538598	MsG0480018963.01.T01:intron	30.0%
!	TTTTTACCTTATTCCCATCT+TGG	+	Chr4:12539659-12539678	None:intergenic	30.0%
!!	AAATTGAATGGTTCTAGCAA+TGG	-	Chr4:12538636-12538655	MsG0480018963.01.T01:intron	30.0%
!!	CTTTCCTTTTCTGATAATGT+CGG	+	Chr4:12539922-12539941	None:intergenic	30.0%
!!	TGACATTTTTAAGCAAGAAC+AGG	+	Chr4:12539383-12539402	None:intergenic	30.0%
!!	TTCGTCTAAAGCAAACTTTT+AGG	+	Chr4:12540943-12540962	None:intergenic	30.0%
!!!	GTCTGGTAATTTTAAGGTTT+CGG	-	Chr4:12538737-12538756	MsG0480018963.01.T01:intron	30.0%
	AAACAGCCCTAAAATTCAGA+AGG	+	Chr4:12538520-12538539	None:intergenic	35.0%
	AAGAACAAGAGAATGTGAAG+AGG	-	Chr4:12540793-12540812	MsG0480018963.01.T01:intron	35.0%
	AATTACCAGACAAACTCTTC+TGG	+	Chr4:12538728-12538747	None:intergenic	35.0%
	AATTGTTGGAGCCATTAACA+TGG	-	Chr4:12537899-12537918	MsG0480018963.01.T01:exon	35.0%
	AGAACAAGAGAATGTGAAGA+GGG	-	Chr4:12540794-12540813	MsG0480018963.01.T01:intron	35.0%
	AGCTTGTCAATAGTCATCTT+TGG	+	Chr4:12540747-12540766	None:intergenic	35.0%
	AGGAATTGGATATCTGGTAT+TGG	-	Chr4:12540660-12540679	MsG0480018963.01.T01:intron	35.0%
	ATACACAGTCAATAACCAGA+TGG	-	Chr4:12540004-12540023	MsG0480018963.01.T01:intron	35.0%
	ATCAAGACTGGAAACTTCTA+TGG	-	Chr4:12540876-12540895	MsG0480018963.01.T01:intron	35.0%
	ATCTTGACAATGTCATCCTT+AGG	+	Chr4:12540257-12540276	None:intergenic	35.0%
	ATCTTTGGTTGCTCAAAAGT+TGG	+	Chr4:12540732-12540751	None:intergenic	35.0%
	ATTGACAAGCTACTAGAGTA+TGG	-	Chr4:12540756-12540775	MsG0480018963.01.T01:intron	35.0%
	ATTTCCACTTTCCAATTCTC+CGG	+	Chr4:12539853-12539872	None:intergenic	35.0%
	CAATTCTCAAACTCATAGCA+TGG	+	Chr4:12540554-12540573	None:intergenic	35.0%
	CAATTTGGACTGTGATATCA+AGG	+	Chr4:12538437-12538456	None:intergenic	35.0%
	CACACACTAACTATGATACT+TGG	-	Chr4:12539736-12539755	MsG0480018963.01.T01:intron	35.0%
	CATGCTATGAGTTTGAGAAT+TGG	-	Chr4:12540552-12540571	MsG0480018963.01.T01:intron	35.0%
	CTAACTATGATACTTGGCTT+AGG	-	Chr4:12539742-12539761	MsG0480018963.01.T01:intron	35.0%
	GACGCATGGAAAAATTCTAT+TGG	-	Chr4:12540171-12540190	MsG0480018963.01.T01:CDS	35.0%
	GATTTGAATTCTACGTCCTA+AGG	+	Chr4:12538121-12538140	None:intergenic	35.0%
	GCACATCTTGGACTTAAAAA+TGG	+	Chr4:12538068-12538087	None:intergenic	35.0%
	GTATATTGCACCTGCATTTA+TGG	-	Chr4:12539510-12539529	MsG0480018963.01.T01:CDS	35.0%
	TACAATTCTCCACGATATCA+AGG	+	Chr4:12538354-12538373	None:intergenic	35.0%
	TCTTGACAATGTCATCCTTA+GGG	+	Chr4:12540256-12540275	None:intergenic	35.0%
	TGAAGAAAGTTAAAGCTGAG+TGG	+	Chr4:12537722-12537741	None:intergenic	35.0%
	TGCATTAATCTCAGCACTTT+AGG	-	Chr4:12541249-12541268	MsG0480018963.01.T01:five_prime_UTR	35.0%
	TGGTTAATTGGGGACTAATA+AGG	-	Chr4:12538590-12538609	MsG0480018963.01.T01:intron	35.0%
	TTCATCAATGATCTTGATGC+AGG	-	Chr4:12539954-12539973	MsG0480018963.01.T01:intron	35.0%
	TTGGAGTTCATGGTTAATTG+GGG	-	Chr4:12538580-12538599	MsG0480018963.01.T01:intron	35.0%
!	AAAGCTTTTCAGCTGCAATT+TGG	+	Chr4:12538452-12538471	None:intergenic	35.0%
!	AATGATGATGCTATCAAGAC+TGG	-	Chr4:12540864-12540883	MsG0480018963.01.T01:intron	35.0%
!	CATGACTCCTTCTGAATTTT+AGG	-	Chr4:12538510-12538529	MsG0480018963.01.T01:intron	35.0%
!	CTCTTCTTTGTTGTACATAC+CGG	+	Chr4:12540081-12540100	None:intergenic	35.0%
!	TCTTCTTTGTTGTACATACC+GGG	+	Chr4:12540080-12540099	None:intergenic	35.0%
!!	AAGGTATTTTCAGGACAGAT+GGG	-	Chr4:12540228-12540247	MsG0480018963.01.T01:CDS	35.0%
!!	ACCGGTACTGATATAATCAT+AGG	+	Chr4:12538928-12538947	None:intergenic	35.0%
!!	AGGTTGGTAGATGATATTCT+AGG	-	Chr4:12539338-12539357	MsG0480018963.01.T01:intron	35.0%
!!	GCAGCATGTAGGTTTTATAT+AGG	+	Chr4:12538236-12538255	None:intergenic	35.0%
!!	GCTGTTTTCATAAGCTATCA+TGG	+	Chr4:12540466-12540485	None:intergenic	35.0%
!!	GTGTTTGTCAAGGTATTTTC+AGG	-	Chr4:12540219-12540238	MsG0480018963.01.T01:CDS	35.0%
!!	TTGAGTTGATAGAAAGAGAG+AGG	+	Chr4:12537769-12537788	None:intergenic	35.0%
!!	TTGTTATTGATGGTGTCCTA+TGG	-	Chr4:12541283-12541302	MsG0480018963.01.T01:five_prime_UTR	35.0%
!!!	AGATTTTTTTGGTGCCTTGA+GGG	-	Chr4:12540614-12540633	MsG0480018963.01.T01:intron	35.0%
!!!	TAGATTTTTTTGGTGCCTTG+AGG	-	Chr4:12540613-12540632	MsG0480018963.01.T01:intron	35.0%
	ACAAGCTTGTCCATAAATGC+AGG	+	Chr4:12539523-12539542	None:intergenic	40.0%
	ACTGCTAATCAAGCACATCT+TGG	+	Chr4:12538080-12538099	None:intergenic	40.0%
	AGAATCATCACTGTGAATCG+TGG	+	Chr4:12539199-12539218	None:intergenic	40.0%
	ATGACGATGAAGTCAGGAAT+TGG	-	Chr4:12540646-12540665	MsG0480018963.01.T01:intron	40.0%
	ATGATACTTGGCTTAGGAGT+AGG	-	Chr4:12539748-12539767	MsG0480018963.01.T01:intron	40.0%
	ATGCGTCCATCACGAATTAA+GGG	+	Chr4:12540158-12540177	None:intergenic	40.0%
	CATTGCAATCCTTGATATCG+TGG	-	Chr4:12538342-12538361	MsG0480018963.01.T01:CDS	40.0%
	CTTTGCCTAATCAACTTTGC+AGG	+	Chr4:12539885-12539904	None:intergenic	40.0%
	GAACTGAGTTCCAAAGTGAT+TGG	+	Chr4:12537798-12537817	None:intergenic	40.0%
	GAAGTCAGGAATTGGATATC+TGG	-	Chr4:12540654-12540673	MsG0480018963.01.T01:intron	40.0%
	GAATTGGAAAGTGGAAATGC+CGG	-	Chr4:12539855-12539874	MsG0480018963.01.T01:intron	40.0%
	GAGCAGACTACAACAAGTTT+AGG	+	Chr4:12539244-12539263	None:intergenic	40.0%
	GCAACTTCTGTGACAATTGT+TGG	-	Chr4:12537885-12537904	MsG0480018963.01.T01:three_prime_UTR	40.0%
	GTTGTCAGCAATGTTCATGA+GGG	+	Chr4:12540039-12540058	None:intergenic	40.0%
	TATGCTCCCTTAATTCGTGA+TGG	-	Chr4:12540149-12540168	MsG0480018963.01.T01:CDS	40.0%
	TATTGTTTGGATGCAGGACA+AGG	-	Chr4:12541018-12541037	MsG0480018963.01.T01:intron	40.0%
	TCTTTGCCAAGATGGGAATA+AGG	-	Chr4:12539650-12539669	MsG0480018963.01.T01:intron	40.0%
	TTAAGGCGAAACCAACTTAC+TGG	+	Chr4:12538956-12538975	None:intergenic	40.0%
	TTCAGAAGGAGTCATGTTCA+TGG	+	Chr4:12538506-12538525	None:intergenic	40.0%
	TTGTACCTGTGCCATGTTAA+TGG	+	Chr4:12537913-12537932	None:intergenic	40.0%
	TTTGGTTGCTCAAAAGTTGG+AGG	+	Chr4:12540729-12540748	None:intergenic	40.0%
!	ACGAATTAAGGGAGCATACA+AGG	+	Chr4:12540147-12540166	None:intergenic	40.0%
!	CTGCAAAGTTGATTAGGCAA+AGG	-	Chr4:12539883-12539902	MsG0480018963.01.T01:intron	40.0%
!	TCCTCTCATTTTGGGCATTT+GGG	-	Chr4:12539588-12539607	MsG0480018963.01.T01:intron	40.0%
!	TTCCTCTCATTTTGGGCATT+TGG	-	Chr4:12539587-12539606	MsG0480018963.01.T01:intron	40.0%
!!	AGGTATTTTCAGGACAGATG+GGG	-	Chr4:12540229-12540248	MsG0480018963.01.T01:CDS	40.0%
!!	CAAGGTATTTTCAGGACAGA+TGG	-	Chr4:12540227-12540246	MsG0480018963.01.T01:CDS	40.0%
!!	TTGGATATCTGGTATTGGTG+TGG	-	Chr4:12540665-12540684	MsG0480018963.01.T01:intron	40.0%
	AAGATTGTCGACACATTCCC+TGG	-	Chr4:12540272-12540291	MsG0480018963.01.T01:CDS	45.0%
	AATCAACTTTGCAGGCTCTC+CGG	+	Chr4:12539877-12539896	None:intergenic	45.0%
	AATGATCTTGATGCAGGAGC+TGG	-	Chr4:12539960-12539979	MsG0480018963.01.T01:intron	45.0%
	ACAGGATATCACCAGAGGAA+AGG	-	Chr4:12538839-12538858	MsG0480018963.01.T01:CDS	45.0%
	ACATTCCCTGGACAGTCAAT+TGG	-	Chr4:12540284-12540303	MsG0480018963.01.T01:CDS	45.0%
	AGCCCTATAATGATGAGTGC+CGG	-	Chr4:12539831-12539850	MsG0480018963.01.T01:intron	45.0%
	AGTTATTGTCAAGACCGACG+CGG	+	Chr4:12540974-12540993	None:intergenic	45.0%
	CAGGATATCACCAGAGGAAA+GGG	-	Chr4:12538840-12538859	MsG0480018963.01.T01:CDS	45.0%
	CAGTGTCTTTCAAGCTCCAA+TGG	-	Chr4:12538872-12538891	MsG0480018963.01.T01:CDS	45.0%
	CATACCGGGAAGTTGAACAT+TGG	+	Chr4:12540066-12540085	None:intergenic	45.0%
	CATGCGTCCATCACGAATTA+AGG	+	Chr4:12540159-12540178	None:intergenic	45.0%
	CATTGCCAGTGACGATGATA+GGG	+	Chr4:12540115-12540134	None:intergenic	45.0%
	CCTACCAATGTTCAACTTCC+CGG	-	Chr4:12540059-12540078	MsG0480018963.01.T01:intron	45.0%
	CGGGAAGTTGAACATTGGTA+GGG	+	Chr4:12540061-12540080	None:intergenic	45.0%
	CGTCGGTCTTGACAATAACT+TGG	-	Chr4:12540974-12540993	MsG0480018963.01.T01:intron	45.0%
	CTCCGGCACTCATCATTATA+GGG	+	Chr4:12539836-12539855	None:intergenic	45.0%
	GAATATGGCCATGCAACCTT+AGG	-	Chr4:12538102-12538121	MsG0480018963.01.T01:intron	45.0%
	GAATTCAAATCCCCTCGAGA+CGG	-	Chr4:12538130-12538149	MsG0480018963.01.T01:intron	45.0%
	GAGCTTGTCTTTGCCAAGAT+GGG	-	Chr4:12539643-12539662	MsG0480018963.01.T01:intron	45.0%
	GAGTGTATGACGATGAAGTC+AGG	-	Chr4:12540640-12540659	MsG0480018963.01.T01:intron	45.0%
	GATAGAAAGAGAGAGGTGAG+AGG	+	Chr4:12537762-12537781	None:intergenic	45.0%
	GATATCCTGTTGGTCATCTG+AGG	+	Chr4:12538829-12538848	None:intergenic	45.0%
	GCGTCCGACATTATCAGAAA+AGG	-	Chr4:12539915-12539934	MsG0480018963.01.T01:intron	45.0%
	GCTTACCAATTGACTGTCCA+GGG	+	Chr4:12540292-12540311	None:intergenic	45.0%
	GGTTGTCAGCAATGTTCATG+AGG	+	Chr4:12540040-12540059	None:intergenic	45.0%
	TAGTGAGTTCCAGCATCCAT+TGG	+	Chr4:12538891-12538910	None:intergenic	45.0%
	TATCACCAGAGGAAAGGGAA+AGG	-	Chr4:12538845-12538864	MsG0480018963.01.T01:CDS	45.0%
	TCATTGCCAGTGACGATGAT+AGG	+	Chr4:12540116-12540135	None:intergenic	45.0%
	TCTCCGGCACTCATCATTAT+AGG	+	Chr4:12539837-12539856	None:intergenic	45.0%
	TGAGCTTGTCTTTGCCAAGA+TGG	-	Chr4:12539642-12539661	MsG0480018963.01.T01:intron	45.0%
	TGAGGGTTGCATTTACCATC+TGG	+	Chr4:12540022-12540041	None:intergenic	45.0%
	TTCCTCTGGTGATATCCTGT+TGG	+	Chr4:12538839-12538858	None:intergenic	45.0%
	TTCTACGTCCTAAGGTTGCA+TGG	+	Chr4:12538113-12538132	None:intergenic	45.0%
	TTTCAAGCTCCAATGGATGC+TGG	-	Chr4:12538879-12538898	MsG0480018963.01.T01:CDS	45.0%
!	ACATAGAAGGTGCAGCATGT+AGG	+	Chr4:12538247-12538266	None:intergenic	45.0%
!	ACTATTTTACCACCGTCTCG+AGG	+	Chr4:12538145-12538164	None:intergenic	45.0%
!	CCTCTCATTTTGGGCATTTG+GGG	-	Chr4:12539589-12539608	MsG0480018963.01.T01:intron	45.0%
!	CTATTTTACCACCGTCTCGA+GGG	+	Chr4:12538144-12538163	None:intergenic	45.0%
!	GAGAGCCTGCAAAGTTGATT+AGG	-	Chr4:12539877-12539896	MsG0480018963.01.T01:intron	45.0%
!	GGGTCATAGTTTTCTGCAGA+AGG	+	Chr4:12541087-12541106	None:intergenic	45.0%
!	TATTTTACCACCGTCTCGAG+GGG	+	Chr4:12538143-12538162	None:intergenic	45.0%
!	TTGGTCATCTGAGGTGTCAT+AGG	+	Chr4:12538820-12538839	None:intergenic	45.0%
!!	AATGATGAGTGCCGGAGAAT+TGG	-	Chr4:12539839-12539858	MsG0480018963.01.T01:intron	45.0%
!!	CTTAATTCGTGATGGACGCA+TGG	-	Chr4:12540157-12540176	MsG0480018963.01.T01:CDS	45.0%
!!	GATAGGGTTGGTGTTTGTCA+AGG	-	Chr4:12540209-12540228	MsG0480018963.01.T01:CDS	45.0%
!!	GGTATTGGTGTGGAGAGTAT+TGG	-	Chr4:12540675-12540694	MsG0480018963.01.T01:intron	45.0%
!!!	ATACTTTTAAAAAAATATAT+TGG	+	Chr4:12538199-12538218	None:intergenic	5.0%
!!!	TACTTTTAAAAAAATATATT+GGG	+	Chr4:12538198-12538217	None:intergenic	5.0%
	AAGGATCAGCGCAACCTTCT+GGG	+	Chr4:12541068-12541087	None:intergenic	50.0%
	ACCAACTTACTGGCGAAGAC+CGG	+	Chr4:12538946-12538965	None:intergenic	50.0%
	ACCAGACAAACTCTTCTGGC+TGG	+	Chr4:12538724-12538743	None:intergenic	50.0%
	AGCAGACCTCAAAGGACAGA+TGG	-	Chr4:12538784-12538803	MsG0480018963.01.T01:CDS	50.0%
	AGTGACGATGATAGGGACAC+GGG	+	Chr4:12540108-12540127	None:intergenic	50.0%
	ATGCCTCCGCAATCACAACT+TGG	+	Chr4:12538409-12538428	None:intergenic	50.0%
	ATTTGGGGAGGCAAAGGTCA+AGG	-	Chr4:12539604-12539623	MsG0480018963.01.T01:intron	50.0%
	CAGTGACGATGATAGGGACA+CGG	+	Chr4:12540109-12540128	None:intergenic	50.0%
	CCAACCCTATCATCACGAGT+AGG	+	Chr4:12540200-12540219	None:intergenic	50.0%
	CCCCAAATGCCCAAAATGAG+AGG	+	Chr4:12539592-12539611	None:intergenic	50.0%
	CCGGGAAGTTGAACATTGGT+AGG	+	Chr4:12540062-12540081	None:intergenic	50.0%
	CCTACTCGTGATGATAGGGT+TGG	-	Chr4:12540197-12540216	MsG0480018963.01.T01:CDS	50.0%
	GACCAACAGGATATCACCAG+AGG	-	Chr4:12538834-12538853	MsG0480018963.01.T01:CDS	50.0%
	GACGAACAAATATGCCGCGT+CGG	-	Chr4:12540957-12540976	MsG0480018963.01.T01:intron	50.0%
	GATGCAGGAGCTGGTAGAAT+GGG	-	Chr4:12539969-12539988	MsG0480018963.01.T01:intron	50.0%
	GCAACTTCCATCGTCACTTC+TGG	+	Chr4:12541115-12541134	None:intergenic	50.0%
	GCAGACCTCAAAGGACAGAT+GGG	-	Chr4:12538785-12538804	MsG0480018963.01.T01:CDS	50.0%
	GGCTTACCAATTGACTGTCC+AGG	+	Chr4:12540293-12540312	None:intergenic	50.0%
	GTCATACACTCTAGCCCTCA+AGG	+	Chr4:12540631-12540650	None:intergenic	50.0%
	GTTCCTTTACCTGTCCCAGA+AGG	-	Chr4:12541051-12541070	MsG0480018963.01.T01:intron	50.0%
	TCACAACTTGGACGCGATTG+AGG	+	Chr4:12538397-12538416	None:intergenic	50.0%
	TCCAGCCAGAAGAGTTTGTC+TGG	-	Chr4:12538720-12538739	MsG0480018963.01.T01:intron	50.0%
	TCGCGGAACTCGCTTTCTTA+AGG	+	Chr4:12538698-12538717	None:intergenic	50.0%
	TCGCGTCCAAGTTGTGATTG+CGG	-	Chr4:12538400-12538419	MsG0480018963.01.T01:CDS	50.0%
	TGACACCTCAGATGACCAAC+AGG	-	Chr4:12538821-12538840	MsG0480018963.01.T01:CDS	50.0%
	TGAGGAGAAGCAGACCTCAA+AGG	-	Chr4:12538776-12538795	MsG0480018963.01.T01:CDS	50.0%
	TGATGCAGGAGCTGGTAGAA+TGG	-	Chr4:12539968-12539987	MsG0480018963.01.T01:intron	50.0%
	TGGAGCCATTAACATGGCAC+AGG	-	Chr4:12537905-12537924	MsG0480018963.01.T01:exon	50.0%
!	ACTCTTCTGGCTGGAAATCG+CGG	+	Chr4:12538715-12538734	None:intergenic	50.0%
!	AGCCTCACTGAGGTATCTGT+CGG	+	Chr4:12540829-12540848	None:intergenic	50.0%
!	AGTGCCGGAGAATTGGAAAG+TGG	-	Chr4:12539846-12539865	MsG0480018963.01.T01:intron	50.0%
!	CTCATTTTGGGCATTTGGGG+AGG	-	Chr4:12539592-12539611	MsG0480018963.01.T01:intron	50.0%
!	TGAGGTATCTGTCGGCTAAC+TGG	+	Chr4:12540821-12540840	None:intergenic	50.0%
!	TGATAATGTCGGACGCCTCA+CGG	+	Chr4:12539911-12539930	None:intergenic	50.0%
!!	CAACCTTCTGGGACAGGTAA+AGG	+	Chr4:12541057-12541076	None:intergenic	50.0%
!!	GATTAGGCAAAGGTACCGTG+AGG	-	Chr4:12539893-12539912	MsG0480018963.01.T01:intron	50.0%
	ACCGGTCTTCGCCAGTAAGT+TGG	-	Chr4:12538942-12538961	MsG0480018963.01.T01:CDS	55.0%
	ACCTCAAAGGACAGATGGGC+TGG	-	Chr4:12538789-12538808	MsG0480018963.01.T01:CDS	55.0%
	AGCCGACAGATACCTCAGTG+AGG	-	Chr4:12540824-12540843	MsG0480018963.01.T01:intron	55.0%
	CACCAGAGGAAAGGGAAAGG+TGG	-	Chr4:12538848-12538867	MsG0480018963.01.T01:CDS	55.0%
	CGTCCAAGTTGTGATTGCGG+AGG	-	Chr4:12538403-12538422	MsG0480018963.01.T01:CDS	55.0%
	CGTGTCCCTATCATCGTCAC+TGG	-	Chr4:12540107-12540126	MsG0480018963.01.T01:CDS	55.0%
	GAAGGATCAGCGCAACCTTC+TGG	+	Chr4:12541069-12541088	None:intergenic	55.0%
	GGCGCCTACTCGTGATGATA+GGG	-	Chr4:12540193-12540212	MsG0480018963.01.T01:CDS	55.0%
	GTCCACCTTTCCCTTTCCTC+TGG	+	Chr4:12538853-12538872	None:intergenic	55.0%
	TACCTCAGTGAGGCTGCTCT+TGG	-	Chr4:12540834-12540853	MsG0480018963.01.T01:intron	55.0%
	TCCAGCCCATCTGTCCTTTG+AGG	+	Chr4:12538793-12538812	None:intergenic	55.0%
	TTCAAATCCCCTCGAGACGG+TGG	-	Chr4:12538133-12538152	MsG0480018963.01.T01:intron	55.0%
	TTGGGCATTTGGGGAGGCAA+AGG	-	Chr4:12539598-12539617	MsG0480018963.01.T01:intron	55.0%
!	CATCGTCACTTCTGGCTGTC+GGG	+	Chr4:12541107-12541126	None:intergenic	55.0%
!	CCATCGTCACTTCTGGCTGT+CGG	+	Chr4:12541108-12541127	None:intergenic	55.0%
	CAGGACAGATGGGGTCCCTA+AGG	-	Chr4:12540238-12540257	MsG0480018963.01.T01:CDS	60.0%
	CCGACAGCCAGAAGTGACGA+TGG	-	Chr4:12541105-12541124	MsG0480018963.01.T01:intron	60.0%
	CTCCAAGAGCAGCCTCACTG+AGG	+	Chr4:12540839-12540858	None:intergenic	60.0%
	GCAGGAGCTGGTAGAATGGG+TGG	-	Chr4:12539972-12539991	MsG0480018963.01.T01:intron	60.0%
	GGGCGCCTACTCGTGATGAT+AGG	-	Chr4:12540192-12540211	MsG0480018963.01.T01:CDS	60.0%
!!	TCAGCGCAACCTTCTGGGAC+AGG	+	Chr4:12541063-12541082	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	12537682	12541377	12537682	ID=MsG0480018963.01;Name=MsG0480018963.01
Chr4	mRNA	12537682	12541377	12537682	ID=MsG0480018963.01.T01;Parent=MsG0480018963.01;Name=MsG0480018963.01.T01;_AED=0.49;_eAED=0.49;_QI=200\|1\|1\|1\|1\|1\|6\|228\|476
Chr4	exon	12537682	12538025	12537682	ID=MsG0480018963.01.T01:exon:7805;Parent=MsG0480018963.01.T01
Chr4	exon	12538162	12538443	12538162	ID=MsG0480018963.01.T01:exon:7804;Parent=MsG0480018963.01.T01
Chr4	exon	12538754	12539226	12538754	ID=MsG0480018963.01.T01:exon:7803;Parent=MsG0480018963.01.T01
Chr4	exon	12539388	12539579	12539388	ID=MsG0480018963.01.T01:exon:7802;Parent=MsG0480018963.01.T01
Chr4	exon	12540104	12540426	12540104	ID=MsG0480018963.01.T01:exon:7801;Parent=MsG0480018963.01.T01
Chr4	exon	12541133	12541377	12541133	ID=MsG0480018963.01.T01:exon:7800;Parent=MsG0480018963.01.T01
Chr4	five_prime_UTR	12541178	12541377	12541178	ID=MsG0480018963.01.T01:five_prime_utr;Parent=MsG0480018963.01.T01
Chr4	CDS	12541133	12541177	12541133	ID=MsG0480018963.01.T01:cds;Parent=MsG0480018963.01.T01
Chr4	CDS	12540104	12540426	12540104	ID=MsG0480018963.01.T01:cds;Parent=MsG0480018963.01.T01
Chr4	CDS	12539388	12539579	12539388	ID=MsG0480018963.01.T01:cds;Parent=MsG0480018963.01.T01
Chr4	CDS	12538754	12539226	12538754	ID=MsG0480018963.01.T01:cds;Parent=MsG0480018963.01.T01
Chr4	CDS	12538162	12538443	12538162	ID=MsG0480018963.01.T01:cds;Parent=MsG0480018963.01.T01
Chr4	CDS	12537910	12538025	12537910	ID=MsG0480018963.01.T01:cds;Parent=MsG0480018963.01.T01
Chr4	three_prime_UTR	12537682	12537909	12537682	ID=MsG0480018963.01.T01:three_prime_utr;Parent=MsG0480018963.01.T01

Gene Sequence

>MsG0480018963.01.T01

ATGGCAACTTCTGTGACAATTGTTGGAGCCATTAACATGGCACAGTTGAAATTGAATGGTTCTAGCAATGGTGCTCCTTTGACAAATTCAGCATTTTTTGGAACAAGCCTTAAGAAAGCGAGTTCCGCGATTTCCAGCCAGAAGAGTTTGTCTGGTAATTTTAAGGTTTCGGCAAAAATTGACTATAATGAGGAGAAGCAGACCTCAAAGGACAGATGGGCTGGACTTGCCTATGACACCTCAGATGACCAACAGGATATCACCAGAGGAAAGGGAAAGGTGGACAGTGTCTTTCAAGCTCCAATGGATGCTGGAACTCACTATGCTGTCATGAGCTCCTATGATTATATCAGTACCGGTCTTCGCCAGTACAATATGGACAACACAATAGATGGCTTGTATATTGCACCTGCATTTATGGACAAGCTTGTTGTTCACATCACTAAGAACTTTCTCAACTTGCCAAATATTAAGATTCCTCTCATTTTGGGCATTTGGGGAGGCAAAGGTCAAGGAAAGTCATTTCAATGTGAGCTTGTCTTTGCCAAGATGGGAATAAGCCCTATAATGATGAGTGCCGGAGAATTGGAAAGTGGAAATGCCGGAGAGCCTGCAAAGTTGATTAGGCAAAGGTACCGTGAGGCGTCCGACATTATCAGAAAAGGAAAGATGTGCTGTCTCTTCATCAATGATCTTGATGCAGGAGCTGGTAGAATGGGTGGCACTACTCAATACACAGTCAATAACCAGATGGTAAATGCAACCCTCATGAACATTGCTGACAACCCTACCAATGTTCAACTTCCCGGTATGTACAACAAAGAAGAGAATGCCCGTGTCCCTATCATCGTCACTGGCAATGACTTCTCTACCTTGTATGCTCCCTTAATTCGTGATGGACGCATGGAAAAATTCTATTGGGCGCCTACTCGTGATGATAGGGTTGGTGTTTGTCAAGGTATTTTCAGGACAGATGGGGTCCCTAAGGATGACATTGTCAAGATTGTCGACACATTCCCTGGACAGTCAATTGATTTTTTTGGTGCCTTGAGGGCTAGAGTGTATGACGATGAAGTCAGGAATTGGATATCTGGTATTGGTGTGGAGAGTATTGGAAAAAGACTTGTGAATTCAAAAGAGGGACCTCCAACTTTTGAGCAACCAAAGATGACTATTGACAAGCTACTAGAGTATGGAAATATGCTTGTTCAAGAACAAGAGAATGTGAAGAGGGTCCAGTTAGCCGACAGATACCTCAGTGAGGCTGCTCTTGGAGATGCAAATGATGATGCTATCAAGACTGGAAACTTCTATGGACAAGGAGCTCAGCAAGTTCCTTTACCTGTCCCAGAAGGTTGCGCTGATCCTTCTGCAGAAAACTATGACCCGACAGCCAGAAGTGACGATGGAAGTTGCACATACACTTTTTAG

Protein sequence

>MsG0480018963.01.T01

MATSVTIVGAINMAQLKLNGSSNGAPLTNSAFFGTSLKKASSAISSQKSLSGNFKVSAKIDYNEEKQTSKDRWAGLAYDTSDDQQDITRGKGKVDSVFQAPMDAGTHYAVMSSYDYISTGLRQYNMDNTIDGLYIAPAFMDKLVVHITKNFLNLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREASDIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCQGIFRTDGVPKDDIVKIVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVESIGKRLVNSKEGPPTFEQPKMTIDKLLEYGNMLVQEQENVKRVQLADRYLSEAALGDANDDAIKTGNFYGQGAQQVPLPVPEGCADPSAENYDPTARSDDGSCTYTF*