AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025392.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025392.01.T01 MTR_5g027530 99.513 411 2 0 1 411 1 411 0.0 849
MsG0580025392.01.T01 MTR_4g103620 30.645 124 83 2 137 257 90 213 8.25e-13 70.1
MsG0580025392.01.T01 MTR_7g029450 28.125 160 112 2 137 293 110 269 9.65e-13 70.1
MsG0580025392.01.T01 MTR_3g061030 26.582 158 115 1 137 293 105 262 5.68e-12 67.8
MsG0580025392.01.T01 MTR_3g061030 26.582 158 115 1 137 293 39 196 1.02e-11 66.6
MsG0580025392.01.T01 MTR_5g096660 26.415 159 114 2 137 292 105 263 3.99e-11 65.1
MsG0580025392.01.T01 MTR_4g073890 25.907 193 112 6 66 253 90 256 5.25e-11 65.1
MsG0580025392.01.T01 MTR_4g073890 25.907 193 112 6 66 253 90 256 9.51e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025392.01.T01 AT1G32060 81.022 411 62 5 1 411 1 395 0.0 681
MsG0580025392.01.T01 AT3G27440 24.681 235 154 5 64 293 28 244 8.66e-16 79.3
MsG0580025392.01.T01 AT3G27440 24.681 235 154 5 64 293 28 244 9.68e-16 79.0
MsG0580025392.01.T01 AT1G55810 25.911 247 144 7 18 257 10 224 9.57e-15 76.3
MsG0580025392.01.T01 AT1G55810 25.911 247 144 7 18 257 10 224 1.05e-14 76.3
MsG0580025392.01.T01 AT1G55810 25.911 247 144 7 18 257 10 224 1.05e-14 76.3
MsG0580025392.01.T01 AT1G55810 25.911 247 144 7 18 257 10 224 1.05e-14 76.3
MsG0580025392.01.T01 AT3G27440 25.843 178 129 3 119 293 20 197 1.22e-14 75.5
MsG0580025392.01.T01 AT1G55810 25.911 247 144 7 18 257 10 224 1.34e-14 75.9
MsG0580025392.01.T01 AT1G55810 25.911 247 144 7 18 257 10 224 1.34e-14 75.9
MsG0580025392.01.T01 AT3G27190 33.065 124 80 2 137 257 119 242 2.59e-14 75.1
MsG0580025392.01.T01 AT1G55810 26.000 200 124 5 64 257 33 214 7.58e-14 73.6
MsG0580025392.01.T01 AT5G40870 28.302 159 111 2 137 292 119 277 4.02e-13 71.2
MsG0580025392.01.T01 AT1G26190 26.368 201 109 7 66 257 66 236 6.38e-11 64.7
MsG0580025392.01.T01 AT1G26190 26.368 201 109 7 66 257 66 236 8.66e-11 64.3
MsG0580025392.01.T01 AT1G26190 26.368 201 109 7 66 257 66 236 9.67e-11 63.9
MsG0580025392.01.T01 AT1G26190 26.368 201 109 7 66 257 66 236 9.82e-11 63.9

Find 100 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTCAATGACCAAGATTT+TGG 0.150126 5:+17923601 None:intergenic
AGTATTTAACACCCTCTTTC+TGG 0.157752 5:+17922292 None:intergenic
AAACAGTTAAACTACAATTT+TGG 0.197070 5:-17924635 MsG0580025392.01.T01:five_prime_UTR
TAATCATGTCACTGGTCTTT+TGG 0.214752 5:-17923648 MsG0580025392.01.T01:CDS
AGTAACTTCTCCATAGAATT+TGG 0.224366 5:+17920639 None:intergenic
TTTGGATGATTACCATTCTT+TGG 0.234705 5:-17923792 MsG0580025392.01.T01:CDS
TTCTCGAGTTAGAGATCTTT+TGG 0.249809 5:-17923001 MsG0580025392.01.T01:CDS
TCTTATCTTCAAACCAACTA+TGG 0.263816 5:+17920555 None:intergenic
GAAATTTGCTTGGAAAATTC+AGG 0.264484 5:-17922944 MsG0580025392.01.T01:intron
GAATCAGGATTTCCACCTTT+TGG 0.277176 5:+17923851 None:intergenic
GTTCTCTCTCTTTCTCTCTA+AGG 0.279835 5:+17924176 None:intergenic
AAGTTGGATAGAGGATTATT+TGG 0.283269 5:+17924231 None:intergenic
CCAATATAAGCTTCAAAATC+AGG 0.308836 5:+17922750 None:intergenic
CTGATAAGTGTGTTTGAATC+AGG 0.321702 5:+17923836 None:intergenic
CCAGTGACATGATTATAAAT+AGG 0.321985 5:+17923656 None:intergenic
TATATATATACACATAATAT+TGG 0.332409 5:-17920454 MsG0580025392.01.T01:three_prime_UTR
CCGTCATCAAACAAGTAAAC+TGG 0.339534 5:+17922264 None:intergenic
ATGACGGTTCTACAATTTCA+TGG 0.358447 5:-17922248 MsG0580025392.01.T01:CDS
ATTGAGATGTTTGTTCTTAG+AGG 0.359760 5:+17924106 None:intergenic
CATTATCATCAGGAATTAGT+TGG 0.362199 5:+17922343 None:intergenic
TCATTTCCTTTGTAAGTCTC+TGG 0.363648 5:+17922168 None:intergenic
AAGAAGAAGTGAGTTTAAGT+TGG 0.366190 5:+17924215 None:intergenic
ATTGGTCTAGCAGCTGATTC+AGG 0.370444 5:-17923935 MsG0580025392.01.T01:CDS
TATTAAACCACCCAAAATCT+TGG 0.372303 5:-17923612 MsG0580025392.01.T01:CDS
AGTTGGATAGAGGATTATTT+GGG 0.372468 5:+17924232 None:intergenic
AACCTCTCTTCCAAATTCTA+TGG 0.381744 5:-17920649 MsG0580025392.01.T01:CDS
TCTTCAAACCAACTATGGTT+TGG 0.386867 5:+17920560 None:intergenic
AGTGAGTTTAAGTTGGATAG+AGG 0.388378 5:+17924222 None:intergenic
CCCAAAATCTTGGTCATTGA+AGG 0.390954 5:-17923602 MsG0580025392.01.T01:CDS
ATCTTTCCTTCATTATCATC+AGG 0.402861 5:+17922333 None:intergenic
TAAGCTTTAGCTGCTCCTAC+TGG 0.408909 5:+17920493 None:intergenic
TAGAGCCAGTGATGACAAAT+TGG 0.420688 5:+17920242 None:intergenic
TGGAAGAGAGGTTGCTTAAG+TGG 0.427841 5:+17920659 None:intergenic
CACAACCACTGTGATATGTT+TGG 0.440482 5:-17923810 MsG0580025392.01.T01:CDS
CCTGTTCCATTGTTGCTACC+AGG 0.444673 5:+17920589 None:intergenic
TTTGACCAATTTGTCATCAC+TGG 0.448715 5:-17920247 MsG0580025392.01.T01:three_prime_UTR
TACCATTCTTTGGATAGAAC+TGG 0.449333 5:-17923782 MsG0580025392.01.T01:CDS
ATAGGTGTCAGTTGTGGAAA+TGG 0.452646 5:-17920725 MsG0580025392.01.T01:intron
TACCAGTTCTATCCAAAGAA+TGG 0.458109 5:+17923780 None:intergenic
ATTATCATCAGGAATTAGTT+GGG 0.460586 5:+17922344 None:intergenic
GCAATGAGGTGAAATTTGCT+TGG 0.466967 5:-17922954 MsG0580025392.01.T01:CDS
CAAAACAAAGGGAGTTTAGC+AGG 0.468657 5:+17924313 None:intergenic
AGATCAAAATCATTAGCTCT+TGG 0.471925 5:+17923728 None:intergenic
GGTCTCTTCCAAACCATAGT+TGG 0.473792 5:-17920568 MsG0580025392.01.T01:CDS
TCATCAGGAATTAGTTGGGT+TGG 0.474077 5:+17922348 None:intergenic
CCTGGTAGCAACAATGGAAC+AGG 0.476412 5:-17920589 MsG0580025392.01.T01:CDS
TTGAGCAGATAGTAGCAAGC+AGG 0.481692 5:-17920525 MsG0580025392.01.T01:CDS
TTGGGTGGTTTAATAAGCTC+AGG 0.487228 5:+17923620 None:intergenic
CTAATTCCTGATGATAATGA+AGG 0.489853 5:-17922339 MsG0580025392.01.T01:CDS
AGTAGGAGCAGCTAAAGCTT+AGG 0.492271 5:-17920491 MsG0580025392.01.T01:exon
ACAATAATATTCAGTGAGAA+TGG 0.495990 5:-17924155 MsG0580025392.01.T01:exon
CTAGCAGCTGATTCAGGATG+TGG 0.497361 5:-17923929 MsG0580025392.01.T01:CDS
TTTGTAAGTCTCTGGTCCAT+AGG 0.514381 5:+17922176 None:intergenic
CTCCATAGAATTTGGAAGAG+AGG 0.516431 5:+17920647 None:intergenic
CCTATTTATAATCATGTCAC+TGG 0.517931 5:-17923656 MsG0580025392.01.T01:CDS
TCACCTCATTGCTAATGTCT+AGG 0.520489 5:+17922965 None:intergenic
CACAAAATAACATACAATAC+AGG 0.522495 5:+17920370 None:intergenic
CCATAGGAAAATTTAATGCC+AGG 0.522813 5:+17922192 None:intergenic
AAACTTACATGCTCTTATCC+TGG 0.529194 5:-17922210 MsG0580025392.01.T01:CDS
GAACTTTAAATCAAAACAAA+GGG 0.529797 5:+17924302 None:intergenic
CCAGTTTACTTGTTTGATGA+CGG 0.531064 5:-17922264 MsG0580025392.01.T01:CDS
TACTTGATAACATGTGGAGC+AGG 0.532032 5:-17923977 MsG0580025392.01.T01:CDS
GACTCACAGACAATTGTGAT+TGG 0.537034 5:-17923953 MsG0580025392.01.T01:CDS
AAGGAAAGATATTAAGAGTG+AGG 0.539424 5:-17922320 MsG0580025392.01.T01:CDS
CTGTTCCATTGTTGCTACCA+GGG 0.541192 5:+17920590 None:intergenic
ATGTTGTATTAATAATATAG+AGG 0.542686 5:-17920312 MsG0580025392.01.T01:three_prime_UTR
TGGAACACATAAAATATATG+AGG 0.549816 5:+17924277 None:intergenic
GATTTCCCTGGTAGCAACAA+TGG 0.550594 5:-17920595 MsG0580025392.01.T01:CDS
AGTGAGGTTGATCCAGAAAG+AGG 0.553461 5:-17922304 MsG0580025392.01.T01:CDS
AACATACAATACAGGAAATG+TGG 0.555086 5:+17920378 None:intergenic
ACAAGTTAAAGCTATTAAAG+AGG 0.558513 5:-17923696 MsG0580025392.01.T01:CDS
CAAACTTGTGACAAAACAAA+GGG 0.559660 5:-17924694 MsG0580025392.01.T01:five_prime_UTR
AGAACTGGTAGAAAAGAGAA+AGG 0.567928 5:-17923767 MsG0580025392.01.T01:CDS
GGAACTTTAAATCAAAACAA+AGG 0.576138 5:+17924301 None:intergenic
CAAGTTAAAGCTATTAAAGA+GGG 0.576481 5:-17923695 MsG0580025392.01.T01:CDS
CGTCATCAAACAAGTAAACT+GGG 0.577268 5:+17922265 None:intergenic
TGAGCAGATAGTAGCAAGCA+GGG 0.579633 5:-17920524 MsG0580025392.01.T01:CDS
TTGAAGCATGCTGATTTCCC+TGG 0.586959 5:-17920607 MsG0580025392.01.T01:CDS
GGTGCAGCAGAACCACCAAA+AGG 0.592650 5:-17923866 MsG0580025392.01.T01:CDS
TTTATACAAAGACATGTATG+TGG 0.594016 5:+17924516 None:intergenic
CATGTAAGTTTCCTTCCACA+TGG 0.594474 5:+17922222 None:intergenic
CCAAACTTGTGACAAAACAA+AGG 0.596841 5:-17924695 MsG0580025392.01.T01:five_prime_UTR
TTTCATGGATACCATGTGGA+AGG 0.599237 5:-17922233 MsG0580025392.01.T01:CDS
GTGAGGTTGATCCAGAAAGA+GGG 0.602515 5:-17922303 MsG0580025392.01.T01:CDS
AGAAGATACTTGATAACATG+TGG 0.602583 5:-17923983 MsG0580025392.01.T01:CDS
AACACATAAAATATATGAGG+TGG 0.602665 5:+17924280 None:intergenic
GGTGGTTTAATAAGCTCAGG+AGG 0.603286 5:+17923623 None:intergenic
GTGTCAGTTGTGGAAATGGA+TGG 0.614489 5:-17920721 MsG0580025392.01.T01:CDS
TCAAAGCTAGCATTGAAGCA+AGG 0.615692 5:-17922776 MsG0580025392.01.T01:CDS
AGAGACTTACAAAGGAAATG+AGG 0.618923 5:-17922166 MsG0580025392.01.T01:intron
GCAGCAGAACCACCAAAAGG+TGG 0.629886 5:-17923863 MsG0580025392.01.T01:CDS
GCAAATATTTCAGAGAGACA+TGG 0.644792 5:-17922826 MsG0580025392.01.T01:intron
CAGAGAGACATGGCAGAACG+TGG 0.647655 5:-17922816 MsG0580025392.01.T01:CDS
TGTGCAATAGGTGTCAGTTG+TGG 0.657015 5:-17920731 MsG0580025392.01.T01:intron
AGCAGGGCTGAGACTCCAGT+AGG 0.659219 5:-17920508 MsG0580025392.01.T01:CDS
CTACCTAGACATTAGCAATG+AGG 0.661511 5:-17922968 MsG0580025392.01.T01:CDS
ACAATTTCATGGATACCATG+TGG 0.667312 5:-17922237 MsG0580025392.01.T01:CDS
TATGGACCAGAGACTTACAA+AGG 0.682242 5:-17922174 MsG0580025392.01.T01:CDS
TATACACATAATATTGGACA+AGG 0.707465 5:-17920448 MsG0580025392.01.T01:three_prime_UTR
ATCATCCAAACATATCACAG+TGG 0.763501 5:+17923805 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTAAAAAAAATTTTT+GGG + Chr5:17922936-17922955 None:intergenic 0.0%
!!! TTTTATTTAAAAAAAATTTT+TGG + Chr5:17922937-17922956 None:intergenic 0.0%
!! ATTATGTGTATATATATATA+AGG + Chr5:17924483-17924502 None:intergenic 10.0%
!! TATATATATACACATAATAT+TGG - Chr5:17924485-17924504 MsG0580025392.01.T01:five_prime_UTR 10.0%
!!! CAAAAATAAGAAAATAATTT+TGG + Chr5:17924535-17924554 None:intergenic 10.0%
!! ATGTTGTATTAATAATATAG+AGG - Chr5:17924627-17924646 MsG0580025392.01.T01:five_prime_UTR 15.0%
!! CAATCATAAAAAAATAGATA+AGG + Chr5:17921710-17921729 None:intergenic 15.0%
!! TAATTAAAAAAATACACATG+TGG - Chr5:17923968-17923987 MsG0580025392.01.T01:CDS 15.0%
!!! AAAATCGAATTATTTTAGTT+AGG + Chr5:17924084-17924065 None:intergenic 15.0%
!!! AAATCGAATTATTTTAGTTA+AGG - Chr5:17924066-17924085 MsG0580025392.01.T01:CDS 15.0%
!!! AAATCGAATTATTTTAGTTA+GGG + Chr5:17924085-17924066 None:intergenic 15.0%
!!! AAGTGAAAACAAAATTATTT+TGG + Chr5:17923649-17923668 None:intergenic 15.0%
!!! AATATTTTGCTTTAGTTAAA+GGG - Chr5:17923454-17923473 MsG0580025392.01.T01:intron 15.0%
!!! AATCGAATTATTTTAGTTAA+GGG - Chr5:17924067-17924086 MsG0580025392.01.T01:CDS 15.0%
!!! ATATATTCTAAGAAAAAGTT+TGG + Chr5:17920685-17920704 None:intergenic 15.0%
!!! TAACTAAAATAATTCGATTT+TGG - Chr5:17923739-17923758 MsG0580025392.01.T01:CDS 15.0%
!!! TAACTAAAATAATTCGATTT+TGG + Chr5:17923758-17923739 None:intergenic 15.0%
!!! TGAAACAGATATTTTTTAAA+TGG + Chr5:17920595-17920614 None:intergenic 15.0%
!! AAAATAGATAGTTCAATTCA+TGG - Chr5:17921822-17921841 MsG0580025392.01.T01:intron 20.0%
!! AAATAAAAAAATTACACACG+TGG + Chr5:17923838-17923857 None:intergenic 20.0%
!! AAATAGATAGTTCAATTCAT+GGG - Chr5:17921823-17921842 MsG0580025392.01.T01:intron 20.0%
!! ACATCTTAGATCAAAATTAT+TGG + Chr5:17922339-17922358 None:intergenic 20.0%
!! ATAAAATTCAAAATTAGCGA+CGG - Chr5:17921419-17921438 MsG0580025392.01.T01:intron 20.0%
!! ATATTTGCCAAATAATTGTT+AGG + Chr5:17922101-17922120 None:intergenic 20.0%
!! ATGACACAATAGTTAAATAT+TGG + Chr5:17924142-17924161 None:intergenic 20.0%
!! CATATTATTCATAGGTTAAT+TGG - Chr5:17922487-17922506 MsG0580025392.01.T01:intron 20.0%
!! GAACTTTAAATCAAAACAAA+GGG + Chr5:17920640-17920659 None:intergenic 20.0%
!! GATAAAGCAAAAGTTAAATA+TGG + Chr5:17924173-17924192 None:intergenic 20.0%
!! TATTAAAATCAAATAAGAGC+AGG + Chr5:17922849-17922868 None:intergenic 20.0%
!!! AAACAGTTAAACTACAATTT+TGG - Chr5:17920304-17920323 MsG0580025392.01.T01:three_prime_UTR 20.0%
!!! AATCGAATTATTTTAGTTAG+GGG + Chr5:17923738-17923757 None:intergenic 20.0%
!!! ACATTAGACATTTTTATCTA+TGG + Chr5:17921563-17921582 None:intergenic 20.0%
!!! AGTTCATTTTTAAAGTTTCA+AGG - Chr5:17923547-17923566 MsG0580025392.01.T01:intron 20.0%
!!! ATCGAATTATTTTAGTTAAG+GGG - Chr5:17924068-17924087 MsG0580025392.01.T01:CDS 20.0%
!!! ATTTTACTATAGAGTAACAA+TGG + Chr5:17921807-17921826 None:intergenic 20.0%
!!! CTATTAAGCCTTAAATATTT+TGG + Chr5:17923674-17923693 None:intergenic 20.0%
!!! GAATATTTTGCTTTAGTTAA+AGG - Chr5:17923453-17923472 MsG0580025392.01.T01:intron 20.0%
!!! GTAAACAACAATTTTGATTT+TGG + Chr5:17920573-17920592 None:intergenic 20.0%
!!! TAGTTAAGCCTTTTTTTTTT+TGG + Chr5:17923162-17923181 None:intergenic 20.0%
!!! TCTATTTTTTTATGATTGTG+TGG - Chr5:17921712-17921731 MsG0580025392.01.T01:intron 20.0%
!!! TTGAATTTTATCTAGTAAGA+TGG + Chr5:17921410-17921429 None:intergenic 20.0%
!!! TTTTTTAAACTTTGTGCAAT+AGG - Chr5:17924196-17924215 MsG0580025392.01.T01:five_prime_UTR 20.0%
! AAATTAATAATCAAGGTGAG+TGG + Chr5:17921890-17921909 None:intergenic 25.0%
! AACACATAAAATATATGAGG+TGG + Chr5:17920662-17920681 None:intergenic 25.0%
! AATAACACAATTTCCAAGTA+GGG - Chr5:17923404-17923423 MsG0580025392.01.T01:intron 25.0%
! ACAAGTTAAAGCTATTAAAG+AGG - Chr5:17921243-17921262 MsG0580025392.01.T01:intron 25.0%
! ACAATAATATTCAGTGAGAA+TGG - Chr5:17920784-17920803 MsG0580025392.01.T01:intron 25.0%
! ACAATGCATAAAAATATGCA+AGG - Chr5:17923112-17923131 MsG0580025392.01.T01:intron 25.0%
! ACGTCTCAAATTAATAATCA+AGG + Chr5:17921897-17921916 None:intergenic 25.0%
! AGCATAGATATTACTTACAT+TGG + Chr5:17921370-17921389 None:intergenic 25.0%
! ATTATCATCAGGAATTAGTT+GGG + Chr5:17922598-17922617 None:intergenic 25.0%
! CAAAAACATGTGCAATTATA+AGG - Chr5:17922045-17922064 MsG0580025392.01.T01:intron 25.0%
! CAAAAGTGAATTATCAAATG+TGG + Chr5:17922461-17922480 None:intergenic 25.0%
! CAAGTTAAAGCTATTAAAGA+GGG - Chr5:17921244-17921263 MsG0580025392.01.T01:intron 25.0%
! CACAAAATAACATACAATAC+AGG + Chr5:17924572-17924591 None:intergenic 25.0%
! CTTCTTAACAAATGTTCTAA+GGG - Chr5:17923607-17923626 MsG0580025392.01.T01:CDS 25.0%
! GCATAGATATTACTTACATT+GGG + Chr5:17921369-17921388 None:intergenic 25.0%
! GGAACTTTAAATCAAAACAA+AGG + Chr5:17920641-17920660 None:intergenic 25.0%
! TATACACATAATATTGGACA+AGG - Chr5:17924491-17924510 MsG0580025392.01.T01:five_prime_UTR 25.0%
! TCACTTCACCAAAATATTTA+AGG - Chr5:17923663-17923682 MsG0580025392.01.T01:CDS 25.0%
! TCGATGATTAATCTATGATA+AGG + Chr5:17923360-17923379 None:intergenic 25.0%
! TGCTTGTACATATTATTCAT+AGG - Chr5:17922479-17922498 MsG0580025392.01.T01:intron 25.0%
! TGGAACACATAAAATATATG+AGG + Chr5:17920665-17920684 None:intergenic 25.0%
! TGTGTATATATATATAAGGC+AGG + Chr5:17924479-17924498 None:intergenic 25.0%
! TTCATCACTAATGATATTAG+AGG + Chr5:17921474-17921493 None:intergenic 25.0%
! TTTATACAAAGACATGTATG+TGG + Chr5:17920426-17920445 None:intergenic 25.0%
!! TTAAGGCTTAATAGCATTTT+TGG - Chr5:17923680-17923699 MsG0580025392.01.T01:CDS 25.0%
!!! AATTTTGGGATAGAATTCAA+TGG + Chr5:17924520-17924539 None:intergenic 25.0%
!!! AGTATTTTAATTCTATCCGA+AGG + Chr5:17923206-17923225 None:intergenic 25.0%
!!! ATCGAATTATTTTAGTTAGG+GGG + Chr5:17923737-17923756 None:intergenic 25.0%
!!! ATTTTGGCCTAACAATTATT+TGG - Chr5:17922091-17922110 MsG0580025392.01.T01:intron 25.0%
!!! GGCATAAAATCTTTTTAACT+TGG - Chr5:17921844-17921863 MsG0580025392.01.T01:intron 25.0%
!!! TGTTGGTTTTAATCAAAAAC+AGG - Chr5:17920877-17920896 MsG0580025392.01.T01:intron 25.0%
!!! TTAAGCCTTTTTTTTTTTGG+TGG + Chr5:17923159-17923178 None:intergenic 25.0%
AACATACAATACAGGAAATG+TGG + Chr5:17924564-17924583 None:intergenic 30.0%
AAGAAGAAGTGAGTTTAAGT+TGG + Chr5:17920727-17920746 None:intergenic 30.0%
AAGGAAAGATATTAAGAGTG+AGG - Chr5:17922619-17922638 MsG0580025392.01.T01:intron 30.0%
AAGTTGGATAGAGGATTATT+TGG + Chr5:17920711-17920730 None:intergenic 30.0%
AATCTTGAGAATCAAGATGT+GGG - Chr5:17921639-17921658 MsG0580025392.01.T01:intron 30.0%
ACATCATCAAAAACACATGT+TGG - Chr5:17920860-17920879 MsG0580025392.01.T01:intron 30.0%
AGCTTGATTGGATATATGAA+GGG + Chr5:17922813-17922832 None:intergenic 30.0%
AGTAACTTCTCCATAGAATT+TGG + Chr5:17924303-17924322 None:intergenic 30.0%
AGTTGGATAGAGGATTATTT+GGG + Chr5:17920710-17920729 None:intergenic 30.0%
ATCTTTCCTTCATTATCATC+AGG + Chr5:17922609-17922628 None:intergenic 30.0%
ATTGAGATGTTTGTTCTTAG+AGG + Chr5:17920836-17920855 None:intergenic 30.0%
CAAACTTGTGACAAAACAAA+GGG - Chr5:17920245-17920264 MsG0580025392.01.T01:three_prime_UTR 30.0%
CAATAACACAATTTCCAAGT+AGG - Chr5:17923403-17923422 MsG0580025392.01.T01:intron 30.0%
CATTATCATCAGGAATTAGT+TGG + Chr5:17922599-17922618 None:intergenic 30.0%
CCAATATAAGCTTCAAAATC+AGG + Chr5:17922192-17922211 None:intergenic 30.0%
CCAGTGACATGATTATAAAT+AGG + Chr5:17921286-17921305 None:intergenic 30.0%
CCTATTTATAATCATGTCAC+TGG - Chr5:17921283-17921302 MsG0580025392.01.T01:intron 30.0%
CGCAACTTCTTGAAATATAA+GGG + Chr5:17923707-17923726 None:intergenic 30.0%
CTACTTGGAAATTGTGTTAT+TGG + Chr5:17923405-17923424 None:intergenic 30.0%
GCAACTTCTTGAAATATAAG+GGG + Chr5:17923706-17923725 None:intergenic 30.0%
GCTTCTTAACAAATGTTCTA+AGG - Chr5:17923606-17923625 MsG0580025392.01.T01:CDS 30.0%
TAATATAGAGGAGAAAAAGC+AGG - Chr5:17924639-17924658 MsG0580025392.01.T01:five_prime_UTR 30.0%
TAGCTTGATTGGATATATGA+AGG + Chr5:17922814-17922833 None:intergenic 30.0%
TATTAAACCACCCAAAATCT+TGG - Chr5:17921327-17921346 MsG0580025392.01.T01:intron 30.0%
TCAATCTTCCTTAATGTATG+TGG - Chr5:17921758-17921777 MsG0580025392.01.T01:intron 30.0%
TCGCAACTTCTATAAACATA+AGG - Chr5:17924097-17924116 MsG0580025392.01.T01:CDS 30.0%
TCGCAACTTCTTGAAATATA+AGG + Chr5:17923708-17923727 None:intergenic 30.0%
TCTTATCTTCAAACCAACTA+TGG + Chr5:17924387-17924406 None:intergenic 30.0%
TTAATCTATGATAAGGAACG+TGG + Chr5:17923353-17923372 None:intergenic 30.0%
TTATTGCAAAGAGTTGAAGT+TGG - Chr5:17922996-17923015 MsG0580025392.01.T01:CDS 30.0%
TTGTTTGTCCACATACATTA+AGG + Chr5:17921769-17921788 None:intergenic 30.0%
TTTACGATTTCCTTTCTTTC+AGG + Chr5:17922236-17922255 None:intergenic 30.0%
TTTGGATGATTACCATTCTT+TGG - Chr5:17921147-17921166 MsG0580025392.01.T01:intron 30.0%
! AACAAACTAGCTTGAATTTG+TGG + Chr5:17922883-17922902 None:intergenic 30.0%
! AGAAGATACTTGATAACATG+TGG - Chr5:17920956-17920975 MsG0580025392.01.T01:intron 30.0%
! AGATCAAAATCATTAGCTCT+TGG + Chr5:17921214-17921233 None:intergenic 30.0%
! ATTTCAAGAAGTTGCGATTT+TGG - Chr5:17923711-17923730 MsG0580025392.01.T01:CDS 30.0%
! CTAATTCCTGATGATAATGA+AGG - Chr5:17922600-17922619 MsG0580025392.01.T01:intron 30.0%
! GAAATTTGCTTGGAAAATTC+AGG - Chr5:17921995-17922014 MsG0580025392.01.T01:intron 30.0%
! GTTTATAGAAGTTGCGATTT+TGG + Chr5:17924094-17924113 None:intergenic 30.0%
! TAAGAACAAACTAGCTTGAT+TGG + Chr5:17922825-17922844 None:intergenic 30.0%
! TTTGTGCTTCTCATTCATTT+TGG - Chr5:17922075-17922094 MsG0580025392.01.T01:intron 30.0%
! TTTTTATGATTGTGTGGACA+AGG - Chr5:17921718-17921737 MsG0580025392.01.T01:intron 30.0%
!! CACAATTCATTCAAGTTTTC+AGG + Chr5:17922976-17922995 None:intergenic 30.0%
!!! ACATGTGTTTTTGATGATGT+TGG + Chr5:17920860-17920879 None:intergenic 30.0%
!!! CCTGATTTTGAAGCTTATAT+TGG - Chr5:17922189-17922208 MsG0580025392.01.T01:CDS 30.0%
!!! TGATTTTGGTTCTTAACTGT+GGG + Chr5:17920559-17920578 None:intergenic 30.0%
!!! TTGATTTTGGTTCTTAACTG+TGG + Chr5:17920560-17920579 None:intergenic 30.0%
AAACTTACATGCTCTTATCC+TGG - Chr5:17922729-17922748 MsG0580025392.01.T01:intron 35.0%
AACCTCTCTTCCAAATTCTA+TGG - Chr5:17924290-17924309 MsG0580025392.01.T01:five_prime_UTR 35.0%
AATCTCTTAAGCAATGTCTC+GGG - Chr5:17923272-17923291 MsG0580025392.01.T01:intron 35.0%
ACAATTTCATGGATACCATG+TGG - Chr5:17922702-17922721 MsG0580025392.01.T01:intron 35.0%
AGAACTGGTAGAAAAGAGAA+AGG - Chr5:17921172-17921191 MsG0580025392.01.T01:intron 35.0%
AGAGACTTACAAAGGAAATG+AGG - Chr5:17922773-17922792 MsG0580025392.01.T01:CDS 35.0%
AGTATTTAACACCCTCTTTC+TGG + Chr5:17922650-17922669 None:intergenic 35.0%
ATAAAAATATGCAAGGTCCG+GGG - Chr5:17923119-17923138 MsG0580025392.01.T01:intron 35.0%
ATCATCCAAACATATCACAG+TGG + Chr5:17921137-17921156 None:intergenic 35.0%
ATCTTGAGAATCAAGATGTG+GGG - Chr5:17921640-17921659 MsG0580025392.01.T01:intron 35.0%
ATGACGGTTCTACAATTTCA+TGG - Chr5:17922691-17922710 MsG0580025392.01.T01:intron 35.0%
ATGCGACACATTCAACAAAT+AGG + Chr5:17923042-17923061 None:intergenic 35.0%
ATTTCCTTTCTTTCAGGAGT+TGG + Chr5:17922230-17922249 None:intergenic 35.0%
CATAAAAATATGCAAGGTCC+GGG - Chr5:17923118-17923137 MsG0580025392.01.T01:intron 35.0%
CCAAACTTGTGACAAAACAA+AGG - Chr5:17920244-17920263 MsG0580025392.01.T01:three_prime_UTR 35.0%
CCAGTTTACTTGTTTGATGA+CGG - Chr5:17922675-17922694 MsG0580025392.01.T01:intron 35.0%
CCATAGGAAAATTTAATGCC+AGG + Chr5:17922750-17922769 None:intergenic 35.0%
CGTCATCAAACAAGTAAACT+GGG + Chr5:17922677-17922696 None:intergenic 35.0%
CTGATAAGTGTGTTTGAATC+AGG + Chr5:17921106-17921125 None:intergenic 35.0%
GAATCTCTTAAGCAATGTCT+CGG - Chr5:17923271-17923290 MsG0580025392.01.T01:intron 35.0%
GAATCTTGAGAATCAAGATG+TGG - Chr5:17921638-17921657 MsG0580025392.01.T01:intron 35.0%
GATTCGTGTTCAATTCCATT+CGG + Chr5:17923256-17923275 None:intergenic 35.0%
GCAAATATTTCAGAGAGACA+TGG - Chr5:17922113-17922132 MsG0580025392.01.T01:intron 35.0%
GCATAAAAATATGCAAGGTC+CGG - Chr5:17923117-17923136 MsG0580025392.01.T01:intron 35.0%
TACCAGTTCTATCCAAAGAA+TGG + Chr5:17921162-17921181 None:intergenic 35.0%
TACCATTCTTTGGATAGAAC+TGG - Chr5:17921157-17921176 MsG0580025392.01.T01:intron 35.0%
TCATTTCCTTTGTAAGTCTC+TGG + Chr5:17922774-17922793 None:intergenic 35.0%
TCGTCTTTAGCAATTTACGA+CGG - Chr5:17922276-17922295 MsG0580025392.01.T01:CDS 35.0%
TCTTCAAACCAACTATGGTT+TGG + Chr5:17924382-17924401 None:intergenic 35.0%
TGAATGTGTCGCATTGTTAA+AGG - Chr5:17923048-17923067 MsG0580025392.01.T01:intron 35.0%
TGTATTAACCGACATCACAT+TGG - Chr5:17923229-17923248 MsG0580025392.01.T01:intron 35.0%
TTTAAACATGTAGCCCTACT+TGG + Chr5:17923420-17923439 None:intergenic 35.0%
TTTGACCAATTTGTCATCAC+TGG - Chr5:17924692-17924711 MsG0580025392.01.T01:five_prime_UTR 35.0%
! ACCTTCAATGACCAAGATTT+TGG + Chr5:17921341-17921360 None:intergenic 35.0%
! ACTTTGTCAAAATTGGCCTA+GGG + Chr5:17923799-17923818 None:intergenic 35.0%
! AGAAGACTCACAAGTGTTTT+TGG - Chr5:17921049-17921068 MsG0580025392.01.T01:intron 35.0%
! CCTGGCATTAAATTTTCCTA+TGG - Chr5:17922747-17922766 MsG0580025392.01.T01:intron 35.0%
! CCTTCAATGACCAAGATTTT+GGG + Chr5:17921340-17921359 None:intergenic 35.0%
! TTCTCGAGTTAGAGATCTTT+TGG - Chr5:17921938-17921957 MsG0580025392.01.T01:intron 35.0%
!! AAATGTGGAAGCATTACTAC+AGG + Chr5:17922446-17922465 None:intergenic 35.0%
!! AGCATCGACTTTGTCAAAAT+TGG + Chr5:17923806-17923825 None:intergenic 35.0%
!! AGCATTGACTTGGTCAAAAT+TGG - Chr5:17924000-17924019 MsG0580025392.01.T01:CDS 35.0%
!! AGTGAGTTTAAGTTGGATAG+AGG + Chr5:17920720-17920739 None:intergenic 35.0%
!! TTGTTTTGTCACAAGTTTGG+AGG + Chr5:17920244-17920263 None:intergenic 35.0%
!!! AGCCTTTTTTTTTTTGGTGG+TGG + Chr5:17923156-17923175 None:intergenic 35.0%
!!! CCTTTGTTTTGTCACAAGTT+TGG + Chr5:17920247-17920266 None:intergenic 35.0%
!!! TAATCATGTCACTGGTCTTT+TGG - Chr5:17921291-17921310 MsG0580025392.01.T01:intron 35.0%
!!! TTTTTTTTTTTGGTGGTGGC+CGG + Chr5:17923152-17923171 None:intergenic 35.0%
AAGGGTTATGCTAACAAGTG+CGG - Chr5:17923472-17923491 MsG0580025392.01.T01:intron 40.0%
ATAGGTGTCAGTTGTGGAAA+TGG - Chr5:17924214-17924233 MsG0580025392.01.T01:five_prime_UTR 40.0%
CAAAACAAAGGGAGTTTAGC+AGG + Chr5:17920629-17920648 None:intergenic 40.0%
CACAACCACTGTGATATGTT+TGG - Chr5:17921129-17921148 MsG0580025392.01.T01:intron 40.0%
CATGTAAGTTTCCTTCCACA+TGG + Chr5:17922720-17922739 None:intergenic 40.0%
CCCAAAATCTTGGTCATTGA+AGG - Chr5:17921337-17921356 MsG0580025392.01.T01:intron 40.0%
CCGTCATCAAACAAGTAAAC+TGG + Chr5:17922678-17922697 None:intergenic 40.0%
CTACCTAGACATTAGCAATG+AGG - Chr5:17921971-17921990 MsG0580025392.01.T01:intron 40.0%
CTCCATAGAATTTGGAAGAG+AGG + Chr5:17924295-17924314 None:intergenic 40.0%
GACAAACAACATGCATACGT+GGG - Chr5:17921780-17921799 MsG0580025392.01.T01:intron 40.0%
GACTCACAGACAATTGTGAT+TGG - Chr5:17920986-17921005 MsG0580025392.01.T01:intron 40.0%
GAGAATCATACCTACATGCA+TGG + Chr5:17921923-17921942 None:intergenic 40.0%
GATTCCAACTCCTGAAAGAA+AGG - Chr5:17922223-17922242 MsG0580025392.01.T01:CDS 40.0%
GGCCACCACCAAAAAAAAAA+AGG - Chr5:17923151-17923170 MsG0580025392.01.T01:intron 40.0%
GTTCTCTCTCTTTCTCTCTA+AGG + Chr5:17920766-17920785 None:intergenic 40.0%
TAGAGCCAGTGATGACAAAT+TGG + Chr5:17924700-17924719 None:intergenic 40.0%
TAGCGACGGAAATATAGAGA+CGG - Chr5:17921433-17921452 MsG0580025392.01.T01:intron 40.0%
TATGGACCAGAGACTTACAA+AGG - Chr5:17922765-17922784 MsG0580025392.01.T01:CDS 40.0%
TCACCTCATTGCTAATGTCT+AGG + Chr5:17921977-17921996 None:intergenic 40.0%
TCATCAGGAATTAGTTGGGT+TGG + Chr5:17922594-17922613 None:intergenic 40.0%
TCTATGATAAGGAACGTGGT+TGG + Chr5:17923349-17923368 None:intergenic 40.0%
TTGGGTGGTTTAATAAGCTC+AGG + Chr5:17921322-17921341 None:intergenic 40.0%
TTTCATGGATACCATGTGGA+AGG - Chr5:17922706-17922725 MsG0580025392.01.T01:intron 40.0%
TTTGTAAGTCTCTGGTCCAT+AGG + Chr5:17922766-17922785 None:intergenic 40.0%
! ACTTGGTCAAAATTGGCCTA+GGG - Chr5:17924007-17924026 MsG0580025392.01.T01:CDS 40.0%
! CCAAGTTGAGCTATTTCCTT+CGG - Chr5:17923187-17923206 MsG0580025392.01.T01:intron 40.0%
! CTTTGTCAAAATTGGCCTAG+GGG + Chr5:17923798-17923817 None:intergenic 40.0%
! GAATCAGGATTTCCACCTTT+TGG + Chr5:17921091-17921110 None:intergenic 40.0%
! GACTTTGTCAAAATTGGCCT+AGG + Chr5:17923800-17923819 None:intergenic 40.0%
! GCAATGAGGTGAAATTTGCT+TGG - Chr5:17921985-17922004 MsG0580025392.01.T01:intron 40.0%
! TACTTGATAACATGTGGAGC+AGG - Chr5:17920962-17920981 MsG0580025392.01.T01:intron 40.0%
! TCAAAGCTAGCATTGAAGCA+AGG - Chr5:17922163-17922182 MsG0580025392.01.T01:intron 40.0%
! TCAATGACCAAGATTTTGGG+TGG + Chr5:17921337-17921356 None:intergenic 40.0%
! TCTTCTGTTGCTGCTCTTTT+TGG + Chr5:17920921-17920940 None:intergenic 40.0%
! TTTGTCAAAATTGGCCTAGG+GGG + Chr5:17923797-17923816 None:intergenic 40.0%
!! GCATCTGCATATTGCTTTTG+TGG + Chr5:17922555-17922574 None:intergenic 40.0%
!!! AGACTCACAAGTGTTTTTGG+AGG - Chr5:17921052-17921071 MsG0580025392.01.T01:intron 40.0%
!!! TTTTGGTTCTTAACTGTGGG+AGG + Chr5:17920556-17920575 None:intergenic 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+GGG + Chr5:17923151-17923170 None:intergenic 40.0%
AGTAGGAGCAGCTAAAGCTT+AGG - Chr5:17924448-17924467 MsG0580025392.01.T01:five_prime_UTR 45.0%
CATTCGGACCAATGTGATGT+CGG + Chr5:17923240-17923259 None:intergenic 45.0%
CCATGTAGATGGGGAAAATG+TGG - Chr5:17923301-17923320 MsG0580025392.01.T01:intron 45.0%
CCGAAGGAAATAGCTCAACT+TGG + Chr5:17923190-17923209 None:intergenic 45.0%
CTGTTCCATTGTTGCTACCA+GGG + Chr5:17924352-17924371 None:intergenic 45.0%
GATTTCCCTGGTAGCAACAA+TGG - Chr5:17924344-17924363 MsG0580025392.01.T01:five_prime_UTR 45.0%
GGACAAACAACATGCATACG+TGG - Chr5:17921779-17921798 MsG0580025392.01.T01:intron 45.0%
GGTCTCTTCCAAACCATAGT+TGG - Chr5:17924371-17924390 MsG0580025392.01.T01:five_prime_UTR 45.0%
GGTGGTTTAATAAGCTCAGG+AGG + Chr5:17921319-17921338 None:intergenic 45.0%
TGAGCAGATAGTAGCAAGCA+GGG - Chr5:17924415-17924434 MsG0580025392.01.T01:five_prime_UTR 45.0%
TGCAAAGGGGGCAAAACATA+GGG + Chr5:17924057-17924038 None:intergenic 45.0%
TGGAAGAGAGGTTGCTTAAG+TGG + Chr5:17924283-17924302 None:intergenic 45.0%
TGTGCAATAGGTGTCAGTTG+TGG - Chr5:17924208-17924227 MsG0580025392.01.T01:five_prime_UTR 45.0%
TTGAGCAGATAGTAGCAAGC+AGG - Chr5:17924414-17924433 MsG0580025392.01.T01:five_prime_UTR 45.0%
! ACGTGGTTGGTCATGTTTAG+TGG + Chr5:17923336-17923355 None:intergenic 45.0%
! AGTGAGGTTGATCCAGAAAG+AGG - Chr5:17922635-17922654 MsG0580025392.01.T01:intron 45.0%
! ATTGGTCTAGCAGCTGATTC+AGG - Chr5:17921004-17921023 MsG0580025392.01.T01:intron 45.0%
! CCACATTTTCCCCATCTACA+TGG + Chr5:17923304-17923323 None:intergenic 45.0%
! CTTGGTCAAAATTGGCCTAG+GGG - Chr5:17924008-17924027 MsG0580025392.01.T01:CDS 45.0%
! GACTTGGTCAAAATTGGCCT+AGG - Chr5:17924006-17924025 MsG0580025392.01.T01:CDS 45.0%
! GAGACGTTTTCCATGCATGT+AGG - Chr5:17921910-17921929 MsG0580025392.01.T01:intron 45.0%
! GTGAGGTTGATCCAGAAAGA+GGG - Chr5:17922636-17922655 MsG0580025392.01.T01:intron 45.0%
! TAAGCTTTAGCTGCTCCTAC+TGG + Chr5:17924449-17924468 None:intergenic 45.0%
! TCAGGATTTCCACCTTTTGG+TGG + Chr5:17921088-17921107 None:intergenic 45.0%
! TGAGCTTGACTCAGTTGGTA+TGG - Chr5:17923089-17923108 MsG0580025392.01.T01:intron 45.0%
! TTTTGCCCCCTTTGCACTTT+TGG - Chr5:17923771-17923790 MsG0580025392.01.T01:CDS 45.0%
! TTTTGCCCCCTTTGCACTTT+TGG + Chr5:17923790-17923771 None:intergenic 45.0%
!! CGGGTTTTAGCCATGTAGAT+GGG - Chr5:17923291-17923310 MsG0580025392.01.T01:intron 45.0%
!! GGGTTTTAGCCATGTAGATG+GGG - Chr5:17923292-17923311 MsG0580025392.01.T01:intron 45.0%
!! TCGGGTTTTAGCCATGTAGA+TGG - Chr5:17923290-17923309 MsG0580025392.01.T01:intron 45.0%
!! TTGAAGCATGCTGATTTCCC+TGG - Chr5:17924332-17924351 MsG0580025392.01.T01:five_prime_UTR 45.0%
!!! AAAAATAAGAAAATAATTTT+GGG + Chr5:17924534-17924553 None:intergenic 5.0%
CAAAGGGGGCAAAACATAGG+AGG - Chr5:17924040-17924059 MsG0580025392.01.T01:CDS 50.0%
CAAAGGGGGCAAAACATAGG+GGG + Chr5:17924059-17924040 None:intergenic 50.0%
CCAACTGAGTCAAGCTCATG+AGG + Chr5:17923087-17923106 None:intergenic 50.0%
CCTCATGAGCTTGACTCAGT+TGG - Chr5:17923084-17923103 MsG0580025392.01.T01:intron 50.0%
CCTGGTAGCAACAATGGAAC+AGG - Chr5:17924350-17924369 MsG0580025392.01.T01:five_prime_UTR 50.0%
CCTGTTCCATTGTTGCTACC+AGG + Chr5:17924353-17924372 None:intergenic 50.0%
CGACATCACATTGGTCCGAA+TGG - Chr5:17923238-17923257 MsG0580025392.01.T01:intron 50.0%
GCAAAGGGGGCAAAACATAG+GGG + Chr5:17924058-17924039 None:intergenic 50.0%
GTGCAAAGGGGGCAAAACAT+AGG - Chr5:17924037-17924056 MsG0580025392.01.T01:CDS 50.0%
GTGCAAAGGGGGCAAAACAT+AGG + Chr5:17924056-17924037 None:intergenic 50.0%
TGACAAAGTCGATGCTGACG+TGG - Chr5:17923810-17923829 MsG0580025392.01.T01:CDS 50.0%
TGACCAAGTCAATGCTGACG+TGG + Chr5:17923996-17924015 None:intergenic 50.0%
! CTAGCAGCTGATTCAGGATG+TGG - Chr5:17921010-17921029 MsG0580025392.01.T01:intron 50.0%
! CTAGGGGCCAAAAGTGCAAA+GGG - Chr5:17924024-17924043 MsG0580025392.01.T01:CDS 50.0%
! TAGGGGCCAAAAGTGCAAAG+GGG - Chr5:17924025-17924044 MsG0580025392.01.T01:CDS 50.0%
! TAGGGGGCCAAAAGTGCAAA+GGG + Chr5:17923781-17923800 None:intergenic 50.0%
CAGAGAGACATGGCAGAACG+TGG - Chr5:17922123-17922142 MsG0580025392.01.T01:intron 55.0%
GATGTGTCTCACGACGCATG+TGG - Chr5:17922354-17922373 MsG0580025392.01.T01:CDS 55.0%
GCAGCAGAACCACCAAAAGG+TGG - Chr5:17921076-17921095 MsG0580025392.01.T01:intron 55.0%
GGTGCAGCAGAACCACCAAA+AGG - Chr5:17921073-17921092 MsG0580025392.01.T01:intron 55.0%
! AGGGGCCAAAAGTGCAAAGG+GGG - Chr5:17924026-17924045 MsG0580025392.01.T01:CDS 55.0%
! AGGGGGCCAAAAGTGCAAAG+GGG + Chr5:17923780-17923799 None:intergenic 55.0%
! CCTAGGGGCCAAAAGTGCAA+AGG - Chr5:17924023-17924042 MsG0580025392.01.T01:CDS 55.0%
! CCTTTGCACTTTTGGCCCCT+AGG + Chr5:17924026-17924045 None:intergenic 55.0%
! CTAGGGGGCCAAAAGTGCAA+AGG + Chr5:17923782-17923801 None:intergenic 55.0%
! CTTTGCACTTTTGGCCCCCT+AGG - Chr5:17923780-17923799 MsG0580025392.01.T01:CDS 55.0%
AGCAGGGCTGAGACTCCAGT+AGG - Chr5:17924431-17924450 MsG0580025392.01.T01:five_prime_UTR 60.0%
CAAGGTCCGGGGTTCAAACC+CGG - Chr5:17923130-17923149 MsG0580025392.01.T01:intron 60.0%
! GGGGGCCAAAAGTGCAAAGG+GGG + Chr5:17923779-17923798 None:intergenic 60.0%
!! GCGCCACGTCAGCATTGACT+TGG - Chr5:17923990-17924009 MsG0580025392.01.T01:CDS 60.0%
TGGTGGCCGGGTTTGAACCC+CGG + Chr5:17923139-17923158 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 17920240 17924721 17920240 ID=MsG0580025392.01;Name=MsG0580025392.01
Chr5 mRNA 17920240 17924721 17920240 ID=MsG0580025392.01.T01;Parent=MsG0580025392.01;Name=MsG0580025392.01.T01;_AED=0.28;_eAED=0.28;_QI=563|1|0.8|1|1|1|5|252|411
Chr5 exon 17920240 17920743 17920240 ID=MsG0580025392.01.T01:exon:28556;Parent=MsG0580025392.01.T01
Chr5 exon 17922167 17922411 17922167 ID=MsG0580025392.01.T01:exon:28555;Parent=MsG0580025392.01.T01
Chr5 exon 17922751 17922835 17922751 ID=MsG0580025392.01.T01:exon:28554;Parent=MsG0580025392.01.T01
Chr5 exon 17922945 17923029 17922945 ID=MsG0580025392.01.T01:exon:28553;Parent=MsG0580025392.01.T01
Chr5 exon 17923590 17924721 17923590 ID=MsG0580025392.01.T01:exon:28552;Parent=MsG0580025392.01.T01
Chr5 five_prime_UTR 17924159 17924721 17924159 ID=MsG0580025392.01.T01:five_prime_utr;Parent=MsG0580025392.01.T01
Chr5 CDS 17923590 17924158 17923590 ID=MsG0580025392.01.T01:cds;Parent=MsG0580025392.01.T01
Chr5 CDS 17922945 17923029 17922945 ID=MsG0580025392.01.T01:cds;Parent=MsG0580025392.01.T01
Chr5 CDS 17922751 17922835 17922751 ID=MsG0580025392.01.T01:cds;Parent=MsG0580025392.01.T01
Chr5 CDS 17922167 17922411 17922167 ID=MsG0580025392.01.T01:cds;Parent=MsG0580025392.01.T01
Chr5 CDS 17920492 17920743 17920492 ID=MsG0580025392.01.T01:cds;Parent=MsG0580025392.01.T01
Chr5 three_prime_UTR 17920240 17920491 17920240 ID=MsG0580025392.01.T01:three_prime_utr;Parent=MsG0580025392.01.T01
Gene Sequence

>MsG0580025392.01.T01

ATGGCAGCATGTACTGTCTACTCAACACAACCTCTAAGAACAAACATCTCAATTCCAACATCATCAAAAACACATGTTGGTTTTAATCAAAAACAGGTACTGTTCTACAGAACAACCAAAAAGAGCAGCAACAGAAGAACTAACAGTAACAACAGAAGATACTTGATAACATGTGGAGCAGGTGACTCACAGACAATTGTGATTGGTCTAGCAGCTGATTCAGGATGTGGAAAAAGTACTTTCATGAGAAGACTCACAAGTGTTTTTGGAGGTGCAGCAGAACCACCAAAAGGTGGAAATCCTGATTCAAACACACTTATCAGTGACACAACCACTGTGATATGTTTGGATGATTACCATTCTTTGGATAGAACTGGTAGAAAAGAGAAAGGTGTTACTGCACTTGATCCAAGAGCTAATGATTTTGATCTTATGTATGAACAAGTTAAAGCTATTAAAGAGGGTGTTTCTGTTCAAAAACCTATTTATAATCATGTCACTGGTCTTTTGGATCCTCCTGAGCTTATTAAACCACCCAAAATCTTGGTCATTGAAGGTCTTCACCCAATGTATGATTCTCGAGTTAGAGATCTTTTGGACTTCAGTATCTACCTAGACATTAGCAATGAGGTGAAATTTGCTTGGAAAATTCAGAGAGACATGGCAGAACGTGGACACAGTCTTGAAAGTATCAAAGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCTTATATTGATCCACAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTAATTCCTGATGATAATGAAGGAAAGATATTAAGAGTGAGGTTGATCCAGAAAGAGGGTGTTAAATACTTTAGCCCAGTTTACTTGTTTGATGACGGTTCTACAATTTCATGGATACCATGTGGAAGGAAACTTACATGCTCTTATCCTGGCATTAAATTTTCCTATGGACCAGAGACTTACAAAGGAAATGAGGTGTCAGTTGTGGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATATGTTGAGAGCCACTTAAGCAACCTCTCTTCCAAATTCTATGGAGAAGTTACTCAACAAATGTTGAAGCATGCTGATTTCCCTGGTAGCAACAATGGAACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTATTTGAGCAGATAGTAGCAAGCAGGGCTGAGACTCCAGTAGGAGCAGCTAAAGCTTAG

Protein sequence

>MsG0580025392.01.T01

MAACTVYSTQPLRTNISIPTSSKTHVGFNQKQVLFYRTTKKSSNRRTNSNNRRYLITCGAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGVSVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFSYGPETYKGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGAAKA*