AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001827.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001827.01.T01 MTR_5g025270 98.077 416 8 0 1 416 157 572 0.0 852
MsG0180001827.01.T01 MTR_5g025230 85.817 416 58 1 1 416 155 569 0.0 755
MsG0180001827.01.T01 MTR_5g025250 84.375 416 64 1 1 416 156 570 0.0 743
MsG0180001827.01.T01 MTR_8g095520 95.588 204 9 0 490 693 408 611 5.87e-131 414
MsG0180001827.01.T01 MTR_8g095520 92.958 71 5 0 418 488 178 248 1.10e-34 143
MsG0180001827.01.T01 MTR_3g098380 78.431 204 44 0 490 693 429 632 8.95e-107 350
MsG0180001827.01.T01 MTR_3g098380 60.563 71 28 0 418 488 199 269 1.51e-20 97.8
MsG0180001827.01.T01 MTR_2g070460 37.857 420 249 8 1 414 188 601 3.98e-95 311
MsG0180001827.01.T01 MTR_3g098320 61.966 234 74 3 490 710 394 625 1.47e-90 300
MsG0180001827.01.T01 MTR_3g098320 48.333 60 31 0 429 488 175 234 8.62e-13 72.4
MsG0180001827.01.T01 MTR_3g098320 61.966 234 74 3 490 710 403 634 1.95e-90 300
MsG0180001827.01.T01 MTR_3g098320 47.761 67 35 0 422 488 177 243 1.56e-14 78.2
MsG0180001827.01.T01 MTR_3g098320 61.966 234 74 3 490 710 403 634 2.29e-90 300
MsG0180001827.01.T01 MTR_3g098320 47.761 67 35 0 422 488 177 243 1.41e-14 78.2
MsG0180001827.01.T01 MTR_1g083290 64.414 222 76 2 490 710 398 617 6.19e-89 301
MsG0180001827.01.T01 MTR_1g083290 52.632 95 38 1 394 488 149 236 2.71e-19 94.0
MsG0180001827.01.T01 MTR_3g098320 61.966 234 74 3 490 710 403 634 1.93e-88 300
MsG0180001827.01.T01 MTR_3g098320 47.761 67 35 0 422 488 177 243 1.47e-14 78.6
MsG0180001827.01.T01 MTR_3g098320 61.966 234 74 3 490 710 394 625 2.19e-88 300
MsG0180001827.01.T01 MTR_3g098320 48.333 60 31 0 429 488 175 234 9.51e-13 72.8
MsG0180001827.01.T01 MTR_3g098350 65.471 223 58 2 490 693 404 626 2.24e-88 300
MsG0180001827.01.T01 MTR_8g037315 37.613 444 251 9 1 423 101 539 1.28e-85 283
MsG0180001827.01.T01 MTR_7g113130 68.780 205 63 1 490 693 411 615 2.55e-84 284
MsG0180001827.01.T01 MTR_7g113130 60.294 68 27 0 421 488 182 249 2.82e-18 90.1
MsG0180001827.01.T01 MTR_7g113130 68.780 205 63 1 490 693 411 615 5.92e-83 284
MsG0180001827.01.T01 MTR_7g113130 60.294 68 27 0 421 488 182 249 3.23e-18 90.5
MsG0180001827.01.T01 MTR_7g113130 68.780 205 63 1 490 693 411 615 9.21e-83 284
MsG0180001827.01.T01 MTR_7g113130 60.294 68 27 0 421 488 182 249 3.26e-18 90.5
MsG0180001827.01.T01 MTR_8g037275 35.506 445 257 10 1 423 138 574 4.86e-79 266
MsG0180001827.01.T01 MTR_8g037290 35.281 445 258 10 1 423 138 574 2.59e-77 262
MsG0180001827.01.T01 MTR_8g037310 35.056 445 259 11 1 423 138 574 1.16e-75 257
MsG0180001827.01.T01 MTR_8g099030 58.222 225 90 3 488 710 443 665 2.06e-74 258
MsG0180001827.01.T01 MTR_8g099030 55.072 69 31 0 420 488 218 286 1.18e-15 82.0
MsG0180001827.01.T01 MTR_8g099030 58.222 225 90 3 488 710 443 665 6.00e-73 258
MsG0180001827.01.T01 MTR_8g099030 55.072 69 31 0 420 488 218 286 1.30e-15 82.0
MsG0180001827.01.T01 MTR_2g043900 53.991 213 97 1 488 699 433 645 9.92e-67 238
MsG0180001827.01.T01 MTR_2g043900 53.991 213 97 1 488 699 433 645 1.15e-66 239
MsG0180001827.01.T01 MTR_2g043900 53.991 213 97 1 488 699 433 645 2.52e-66 239
MsG0180001827.01.T01 MTR_4g109530 45.098 204 111 1 490 692 366 569 3.48e-51 192
MsG0180001827.01.T01 MTR_4g109530 45.098 204 111 1 490 692 351 554 8.02e-51 192
MsG0180001827.01.T01 MTR_7g060540 45.000 220 118 2 492 710 138 355 2.22e-50 187
MsG0180001827.01.T01 MTR_7g060540 47.525 202 105 1 492 692 138 339 5.93e-50 187
MsG0180001827.01.T01 MTR_7g060540 47.783 203 103 2 492 692 358 559 2.12e-49 187
MsG0180001827.01.T01 MTR_7g060540 47.783 203 103 2 492 692 358 559 3.46e-49 187
MsG0180001827.01.T01 MTR_3g110195 27.232 448 276 13 1 414 147 578 6.89e-39 153
MsG0180001827.01.T01 MTR_1g081425 88.732 71 8 0 773 843 47 117 8.85e-37 134
MsG0180001827.01.T01 MTR_1g075047 84.932 73 11 0 769 841 1 73 9.59e-36 130
MsG0180001827.01.T01 MTR_8g021110 82.090 67 12 0 777 843 132 198 2.55e-29 116
MsG0180001827.01.T01 MTR_4g083410 56.471 85 37 0 759 843 4 88 5.81e-25 100
MsG0180001827.01.T01 MTR_7g089470 86.275 51 7 0 793 843 57 107 6.61e-24 97.4
MsG0180001827.01.T01 MTR_8g080930 70.312 64 17 1 780 843 6 67 6.73e-23 93.2
MsG0180001827.01.T01 MTR_1g106885 95.652 46 2 0 722 767 1 46 1.72e-21 98.2
MsG0180001827.01.T01 MTR_0021s0270 93.617 47 3 0 722 768 1 47 7.70e-21 92.8
MsG0180001827.01.T01 MTR_7g105700 95.652 46 2 0 722 767 1 46 1.20e-20 87.4
MsG0180001827.01.T01 MTR_4g053360 46.721 122 22 2 722 843 1 79 9.46e-20 84.7
MsG0180001827.01.T01 MTR_4g063620 91.304 46 4 0 722 767 1 46 1.97e-19 84.0
MsG0180001827.01.T01 MTR_2g014790 93.023 43 3 0 725 767 4 46 2.14e-18 82.8
MsG0180001827.01.T01 MTR_1g048350 94.872 39 2 0 722 760 1 39 9.05e-18 85.1
MsG0180001827.01.T01 MTR_5g077245 84.000 50 5 2 722 768 1 50 2.68e-17 85.1
MsG0180001827.01.T01 MTR_7g063800 25.887 282 168 8 166 417 295 565 1.74e-16 84.0
MsG0180001827.01.T01 MTR_3g109610 24.934 381 234 16 73 417 201 565 2.93e-16 83.6
MsG0180001827.01.T01 MTR_0004s0260 97.222 36 1 0 722 757 1 36 4.15e-16 81.3
MsG0180001827.01.T01 MTR_7g084840 97.222 36 1 0 722 757 1 36 9.53e-16 73.9
MsG0180001827.01.T01 MTR_7g072210 94.444 36 2 0 722 757 1 36 7.14e-15 77.8
MsG0180001827.01.T01 MTR_2g022120 68.852 61 5 2 722 768 1 61 8.15e-15 77.8
MsG0180001827.01.T01 MTR_6g092533 68.852 61 5 2 722 768 1 61 9.84e-15 77.4
MsG0180001827.01.T01 MTR_7g009090 84.615 39 6 0 722 760 1 39 1.37e-13 67.4
MsG0180001827.01.T01 MTR_3g108300 71.111 45 13 0 772 816 58 102 9.96e-13 65.9
MsG0180001827.01.T01 MTR_1g075060 88.235 34 4 0 734 767 14 47 1.28e-12 70.9
MsG0180001827.01.T01 MTR_2g073570 76.923 39 9 0 722 760 1 39 7.58e-12 64.3
MsG0180001827.01.T01 MTR_7g068700 71.739 46 12 1 722 766 1 46 1.21e-11 62.8
MsG0180001827.01.T01 MTR_8g017060 82.353 34 6 0 810 843 186 219 3.78e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001827.01.T01 AT4G19170 71.127 426 112 5 1 416 165 589 0.0 639
MsG0180001827.01.T01 AT3G63520 40.136 441 239 9 1 422 102 536 3.30e-95 309
MsG0180001827.01.T01 AT1G30100 40.714 420 238 8 1 414 166 580 5.44e-94 307
MsG0180001827.01.T01 AT3G14440 39.667 421 240 9 1 414 176 589 5.80e-93 305
MsG0180001827.01.T01 AT4G18350 38.955 421 245 7 1 414 159 574 6.39e-91 299
MsG0180001827.01.T01 AT1G78390 38.515 431 245 11 1 422 236 655 3.75e-90 299
MsG0180001827.01.T01 AT5G47910 66.667 204 68 0 490 693 442 645 6.55e-85 291
MsG0180001827.01.T01 AT5G47910 54.930 71 32 0 418 488 211 281 1.28e-17 88.6
MsG0180001827.01.T01 AT1G09090 61.244 209 77 2 489 693 360 568 1.25e-83 280
MsG0180001827.01.T01 AT1G09090 50.000 68 34 0 421 488 132 199 5.00e-13 73.2
MsG0180001827.01.T01 AT1G09090 61.244 209 77 2 489 693 360 568 1.07e-81 280
MsG0180001827.01.T01 AT1G09090 50.000 68 34 0 421 488 132 199 5.66e-13 73.6
MsG0180001827.01.T01 AT5G51060 64.078 206 72 2 490 693 417 622 1.70e-81 281
MsG0180001827.01.T01 AT5G51060 29.952 207 113 7 411 588 173 376 6.61e-18 89.4
MsG0180001827.01.T01 AT3G24220 36.215 428 260 11 1 421 154 575 2.25e-77 262
MsG0180001827.01.T01 AT5G07390 57.658 222 92 2 490 709 378 599 2.45e-77 268
MsG0180001827.01.T01 AT5G07390 46.250 80 39 1 410 485 167 246 5.65e-14 76.6
MsG0180001827.01.T01 AT5G07390 59.155 213 86 1 490 701 410 622 1.27e-76 267
MsG0180001827.01.T01 AT5G07390 45.783 83 41 1 410 488 167 249 7.23e-15 79.7
MsG0180001827.01.T01 AT4G25090 60.386 207 79 2 490 693 369 575 3.95e-76 265
MsG0180001827.01.T01 AT4G25090 42.683 82 43 1 411 488 123 204 8.71e-15 79.3
MsG0180001827.01.T01 AT4G25090 60.386 207 79 2 490 693 357 563 4.92e-76 265
MsG0180001827.01.T01 AT4G25090 42.683 82 43 1 411 488 123 204 9.01e-15 79.3
MsG0180001827.01.T01 AT1G64060 58.654 208 84 2 488 693 449 656 9.47e-70 249
MsG0180001827.01.T01 AT1G64060 50.725 69 34 0 420 488 224 292 6.02e-14 76.6
MsG0180001827.01.T01 AT1G19230 52.889 225 101 4 488 710 428 649 3.33e-62 227
MsG0180001827.01.T01 AT1G19230 42.857 84 43 1 410 488 213 296 7.77e-12 69.7
MsG0180001827.01.T01 AT1G19230 52.889 225 101 4 488 710 454 675 3.47e-62 227
MsG0180001827.01.T01 AT1G19230 42.857 84 43 1 410 488 213 296 7.60e-12 69.7
MsG0180001827.01.T01 AT4G11230 52.727 220 101 2 492 710 441 658 4.65e-59 218
MsG0180001827.01.T01 AT4G11230 52.857 70 32 1 419 488 214 282 8.07e-13 73.2
MsG0180001827.01.T01 AT3G45810 49.010 202 102 1 492 692 394 595 3.46e-54 203
MsG0180001827.01.T01 AT5G60010 47.291 203 105 2 492 692 383 585 2.18e-49 188

Find 187 sgRNAs with CRISPR-Local

Find 726 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCCTCAACAATCATATTT+TGG 0.164409 1:-27808139 None:intergenic
AATCCTCTTGACATGATTTC+TGG 0.188747 1:+27799459 MsG0180001827.01.T01:CDS
GTTGATAATTGTTGGGATTT+TGG 0.204920 1:-27808064 None:intergenic
ATTTGCATCAAAACGGAAAT+AGG 0.215073 1:-27799325 None:intergenic
GTGAAGATTAATATCAAAAC+TGG 0.276508 1:+27799720 MsG0180001827.01.T01:CDS
AAGTCTCTCCAATGCATAAA+TGG 0.282846 1:-27802253 None:intergenic
CAGACCAAAGCTTTGATACT+AGG 0.290247 1:+27801034 MsG0180001827.01.T01:CDS
AATCCAATGCCAAAGATTTC+AGG 0.293364 1:+27799846 MsG0180001827.01.T01:CDS
CGTGTTGAATTGATTGTTAT+TGG 0.293613 1:-27808012 None:intergenic
GTTGGTTGGGAAATTGATTT+GGG 0.294804 1:-27808088 None:intergenic
CTAGATTTCGGGGTGATAAA+TGG 0.295975 1:+27799777 MsG0180001827.01.T01:CDS
AGATCCAGTTTAGGGAGTTC+TGG 0.296332 1:+27801001 MsG0180001827.01.T01:CDS
CAGTGCGAAACCTAGATTTC+GGG 0.305625 1:+27799766 MsG0180001827.01.T01:CDS
TCTAGGTTTCGCACTGATAA+TGG 0.306548 1:-27799759 None:intergenic
AATCTTGACGGCCGATTGTT+TGG 0.307017 1:-27799200 None:intergenic
GTTGAAGGGTTTAGGTAGTT+TGG 0.307613 1:-27801979 None:intergenic
TGTTGGTTGGGAAATTGATT+TGG 0.309988 1:-27808089 None:intergenic
AGAAGAGGATGATGGTTATT+TGG 0.316567 1:+27799974 MsG0180001827.01.T01:CDS
CGATTAACAAGATCCAGTTT+AGG 0.323576 1:+27800992 MsG0180001827.01.T01:CDS
TATTATGTTATGTACTAATT+CGG 0.333763 1:+27802588 MsG0180001827.01.T01:CDS
TTAGTCTTTGATTAGTGAAA+TGG 0.335886 1:+27807986 MsG0180001827.01.T01:intron
TTTGGTTGGGAAATTGATTT+GGG 0.336134 1:-27808121 None:intergenic
TTCACCACTCCTGAAATCTT+TGG 0.336330 1:-27799855 None:intergenic
ACAAAATGCCAGTAACTTGA+TGG 0.336352 1:-27801864 None:intergenic
GATTAACAAGATCCAGTTTA+GGG 0.337450 1:+27800993 MsG0180001827.01.T01:CDS
TTCCTTAGTCAAGTAAAGTT+TGG 0.338913 1:-27802081 None:intergenic
TACAATCCTTCTAACGGAAT+TGG 0.339439 1:+27799078 MsG0180001827.01.T01:CDS
CATTTATCACCCCGAAATCT+AGG 0.339483 1:-27799776 None:intergenic
ACCGCAGCACGTGTCATATC+TGG 0.342484 1:+27799051 MsG0180001827.01.T01:CDS
TCACAGGTTTCAATGCCTTT+TGG 0.346810 1:+27802006 MsG0180001827.01.T01:CDS
TTAATTGCCAACACATTTCC+AGG 0.347300 1:-27802472 None:intergenic
GCTAAACCAATTCCGTTAGA+AGG 0.348673 1:-27799084 None:intergenic
AATTCTAATGGTTGTGCTAA+TGG 0.351045 1:+27801911 MsG0180001827.01.T01:CDS
TGCAATTCGTAATGAGCATT+TGG 0.356060 1:-27808299 None:intergenic
AACACAAGTTTGGCTTTGTT+TGG 0.358095 1:+27799108 MsG0180001827.01.T01:CDS
GTGAGTTTGTTGAAGGGTTT+AGG 0.363562 1:-27801987 None:intergenic
TGGTTCCATGGATAATCAAC+AGG 0.364932 1:-27802061 None:intergenic
GATACTCTTGCTCGGCAGAT+AGG 0.373480 1:+27800955 MsG0180001827.01.T01:CDS
TCAGTGCGAAACCTAGATTT+CGG 0.374050 1:+27799765 MsG0180001827.01.T01:CDS
TTGTATGGAGAGGGTTGTTA+TGG 0.374199 1:+27799915 MsG0180001827.01.T01:CDS
CCTTTACACTGGCCAATACT+AGG 0.375742 1:+27801940 MsG0180001827.01.T01:CDS
TTGAAGGTGGCTGTTTATCC+TGG 0.376154 1:+27802454 MsG0180001827.01.T01:intron
AAATCTTGGGAAGGGGTAAC+AGG 0.380435 1:+27801888 MsG0180001827.01.T01:CDS
GAGAGAAACCATCAAGTTAC+TGG 0.384717 1:+27801856 MsG0180001827.01.T01:CDS
AGGTTTGTTTATGCGGCAAT+TGG 0.386277 1:+27799822 MsG0180001827.01.T01:CDS
AAGCACATAAGGACAAAGTT+TGG 0.386881 1:+27808335 MsG0180001827.01.T01:CDS
TGGTTTAGCCAACACAAGTT+TGG 0.393154 1:+27799098 MsG0180001827.01.T01:CDS
TGAGCCTAGTATCAAAGCTT+TGG 0.396068 1:-27801038 None:intergenic
AGTCCCAGAACTCCCTAAAC+TGG 0.398261 1:-27801005 None:intergenic
TTTGTAGACTTGGATGTATC+TGG 0.404431 1:+27802218 MsG0180001827.01.T01:intron
TGTTAAACATAACGATGTTC+CGG 0.404869 1:+27799350 MsG0180001827.01.T01:CDS
TTGAAACCAGAAAACACGTT+TGG 0.405859 1:-27798994 None:intergenic
GGTGTAAGCTTGATTTCATA+AGG 0.411021 1:-27799165 None:intergenic
TCCCTCAGATTGCTCAAAAT+CGG 0.416577 1:-27808189 None:intergenic
TCCCATCACCATTTATGCAT+TGG 0.416748 1:+27802245 MsG0180001827.01.T01:CDS
GTGTTGAATTGATTGTTATT+GGG 0.417610 1:-27808011 None:intergenic
CAGATCTAGTGAAGCACATA+AGG 0.420851 1:+27808324 MsG0180001827.01.T01:CDS
AACCAAACTTTACTTGACTA+AGG 0.422801 1:+27802079 MsG0180001827.01.T01:CDS
GATCCAGTTTAGGGAGTTCT+GGG 0.425992 1:+27801002 MsG0180001827.01.T01:CDS
TCAAGTAAAGTTTGGTTCCA+TGG 0.429335 1:-27802073 None:intergenic
ACTCCTGAAATCTTTGGCAT+TGG 0.436531 1:-27799849 None:intergenic
TTTGGGTGTTGATAATTGTT+GGG 0.440817 1:-27808071 None:intergenic
ATTTGGGTGTTGATAATTGT+TGG 0.449788 1:-27808072 None:intergenic
GGTAACACCTCGGTCGGGTA+TGG 0.450536 1:-27808233 None:intergenic
CCTAAAATTGACGGCGACAC+TGG 0.451020 1:+27799258 MsG0180001827.01.T01:CDS
AAATTACCTTGTTAAAATTG+AGG 0.451368 1:-27801580 None:intergenic
ACCTCGGTCGGGTATGGTTG+CGG 0.454874 1:-27808227 None:intergenic
AAACCATACGGCACCCTCCT+TGG 0.455270 1:-27800092 None:intergenic
AAAGTCTGTGCGAATATTGA+AGG 0.455530 1:+27802299 MsG0180001827.01.T01:CDS
TGAAACCAGAAAACACGTTT+GGG 0.456713 1:-27798993 None:intergenic
ATTTCTGGTGGTTCTCCAGT+AGG 0.459625 1:+27799474 MsG0180001827.01.T01:CDS
CCGATCCATCAAAAGTTTCA+AGG 0.463927 1:+27799499 MsG0180001827.01.T01:CDS
TGCTCAATGGAGAGAACATT+CGG 0.468229 1:-27799654 None:intergenic
TAACACCATTTGCATCAAAA+CGG 0.472715 1:-27799332 None:intergenic
CGCGATCAATGCGTGGGATG+GGG 0.473648 1:+27799599 MsG0180001827.01.T01:CDS
ACGCGATCAATGCGTGGGAT+GGG 0.477959 1:+27799598 MsG0180001827.01.T01:CDS
ATACTCTTGCTCGGCAGATA+GGG 0.478128 1:+27800956 MsG0180001827.01.T01:CDS
TATGGAGAGGGTTGTTATGG+TGG 0.479678 1:+27799918 MsG0180001827.01.T01:CDS
GTGACGAGTCGAAGATGAAA+TGG 0.483688 1:+27799547 MsG0180001827.01.T01:CDS
GAAGTTGGATGTAGGTTGTA+TGG 0.483755 1:+27799900 MsG0180001827.01.T01:CDS
TTATGTGCATGATGAGAAGA+AGG 0.484903 1:+27800001 MsG0180001827.01.T01:CDS
GTTTGCCGTTAAAATCTTGA+CGG 0.485908 1:-27799212 None:intergenic
CCTAGTATTGGCCAGTGTAA+AGG 0.486019 1:-27801940 None:intergenic
ATAGCTCTGGCAATAGCAAT+TGG 0.488164 1:+27801738 MsG0180001827.01.T01:CDS
CACGCGATCAATGCGTGGGA+TGG 0.488713 1:+27799597 MsG0180001827.01.T01:CDS
CCTCTTGACATGATTTCTGG+TGG 0.488783 1:+27799462 MsG0180001827.01.T01:CDS
ATGAAATGGTTCGATGTGCC+AGG 0.489596 1:+27799561 MsG0180001827.01.T01:CDS
GTCGCCGGAGTTTGAGATTG+TGG 0.494521 1:+27800055 MsG0180001827.01.T01:CDS
ATTGTTTGGATATCACCGTT+TGG 0.495988 1:-27799186 None:intergenic
CACTGGCCAATACTAGGTTC+AGG 0.496070 1:+27801946 MsG0180001827.01.T01:CDS
AACGGTGATATCCAAACAAT+CGG 0.496479 1:+27799189 MsG0180001827.01.T01:CDS
AAAACACGTTTGGGATAAGT+TGG 0.498794 1:-27798984 None:intergenic
TCTCTCCATCGTATGCTCAA+TGG 0.500819 1:-27799667 None:intergenic
TTTGATGGATCGGAACCTAC+TGG 0.501938 1:-27799489 None:intergenic
TACAAAATCGAAAACGAAGC+TGG 0.505480 1:+27798958 MsG0180001827.01.T01:CDS
AAAGAATAGGTTTGTTTATG+CGG 0.507283 1:+27799815 MsG0180001827.01.T01:CDS
CTCCAATGCATAAATGGTGA+TGG 0.507413 1:-27802247 None:intergenic
GGTCTTGTCATGGAGAAAAC+CGG 0.510037 1:-27799369 None:intergenic
GGTTTGTTTATGCGGCAATT+GGG 0.511453 1:+27799823 MsG0180001827.01.T01:CDS
ACTGCTCATCCTAAAATTGA+CGG 0.512038 1:+27799249 MsG0180001827.01.T01:CDS
TTTGAGCAATCTGAGGGAAG+TGG 0.512860 1:+27808194 MsG0180001827.01.T01:CDS
GGAGTTTGAGATTGTGGCGG+AGG 0.515266 1:+27800061 MsG0180001827.01.T01:CDS
GCTCGGCAGATAGGGATTCA+AGG 0.516505 1:+27800964 MsG0180001827.01.T01:CDS
CACGCCATTACAATCTCAAA+CGG 0.522637 1:+27798895 MsG0180001827.01.T01:CDS
TGGAAGAATCACCGAGGAAG+AGG 0.522909 1:+27801180 MsG0180001827.01.T01:CDS
AGGAAGAGGTAAAAGATGTA+TGG 0.524125 1:+27801194 MsG0180001827.01.T01:CDS
AGGAACAAAAGCACCTAGCT+TGG 0.524887 1:-27801546 None:intergenic
GCGAAATCATGAAGAAAAGA+AGG 0.525570 1:-27799390 None:intergenic
GAGGGAGGATGGTGAAGAAG+AGG 0.527711 1:+27799959 MsG0180001827.01.T01:CDS
CCATCAAAAGTTTCAAGGAT+CGG 0.531863 1:+27799504 MsG0180001827.01.T01:CDS
GAAACCTGTGAGTTTGTTGA+AGG 0.536478 1:-27801994 None:intergenic
GGTGATGGATGCGAAGTCGC+CGG 0.538159 1:+27800040 MsG0180001827.01.T01:CDS
AACTTTACTTGACTAAGGAA+TGG 0.538178 1:+27802084 MsG0180001827.01.T01:CDS
ATTCCTCCTGAACCTAGTAT+TGG 0.538799 1:-27801952 None:intergenic
CTCAGGAATAGGACCAAGCT+AGG 0.539998 1:+27801533 MsG0180001827.01.T01:intron
AAGGTGGGTAACACCTCGGT+CGG 0.544141 1:-27808239 None:intergenic
CAACCAAAATATGATTGTTG+AGG 0.544988 1:+27808136 MsG0180001827.01.T01:CDS
TCATGCACGCGATCAATGCG+TGG 0.547541 1:+27799592 MsG0180001827.01.T01:CDS
GAAATCAAGCTTACACCAAA+CGG 0.548084 1:+27799171 MsG0180001827.01.T01:CDS
GTGTTTACGGATATTCAGCT+TGG 0.550330 1:+27799432 MsG0180001827.01.T01:CDS
AGGTGGGTAACACCTCGGTC+GGG 0.551104 1:-27808238 None:intergenic
ATTTGTAAGTTTGAACGTAA+CGG 0.551232 1:-27798936 None:intergenic
TATGACACGTGCTGCGGTGA+CGG 0.553634 1:-27799046 None:intergenic
TAAGGAATGGAACCATAAAA+CGG 0.553885 1:+27802097 MsG0180001827.01.T01:CDS
TCCAATGCATAAATGGTGAT+GGG 0.555776 1:-27802246 None:intergenic
GTGATAAATGGTGATTACAT+GGG 0.557337 1:+27799789 MsG0180001827.01.T01:CDS
TAAGCTTGATTTCATAAGGA+AGG 0.561782 1:-27799161 None:intergenic
GGATGTAGGTTGTATGGAGA+GGG 0.565942 1:+27799906 MsG0180001827.01.T01:CDS
ATTAATATGTCAAAGCCTCA+AGG 0.569847 1:+27802490 MsG0180001827.01.T01:CDS
CGCACATGATTTGCAAAGGT+GGG 0.569883 1:-27808254 None:intergenic
TGGATGTAGGTTGTATGGAG+AGG 0.572621 1:+27799905 MsG0180001827.01.T01:CDS
GGTGATAAATGGTGATTACA+TGG 0.575102 1:+27799788 MsG0180001827.01.T01:CDS
TCCGCCACAATCTCAAACTC+CGG 0.575111 1:-27800059 None:intergenic
CTTATAGCTTCTGCTGCACG+TGG 0.575305 1:+27799021 MsG0180001827.01.T01:CDS
AGGATGAGCAGTCATACTCA+TGG 0.575328 1:-27799238 None:intergenic
AACGTAACGGCTACAGAGTG+TGG 0.575577 1:-27798923 None:intergenic
GCGTGCATGATATTAAATCC+TGG 0.576415 1:-27799579 None:intergenic
AGGATTGAATGAAGAGTCAA+AGG 0.577878 1:+27800912 MsG0180001827.01.T01:intron
TATGTGCATGATGAGAAGAA+GGG 0.578787 1:+27800002 MsG0180001827.01.T01:CDS
AAGAAAAGAAGGTCTTGTCA+TGG 0.578816 1:-27799379 None:intergenic
AGGGGTAACAGGAATTCTAA+TGG 0.579371 1:+27801899 MsG0180001827.01.T01:CDS
AAACAAAGCCAAACTTGTGT+TGG 0.580683 1:-27799106 None:intergenic
AATAATCCATGAAAACCATA+CGG 0.583712 1:-27800104 None:intergenic
TGTTTATCCTGGAAATGTGT+TGG 0.584274 1:+27802465 MsG0180001827.01.T01:CDS
AAACCCTTCAACAAACTCAC+AGG 0.585965 1:+27801990 MsG0180001827.01.T01:CDS
AAGGTGAGGAAGTTGGATGT+AGG 0.586152 1:+27799892 MsG0180001827.01.T01:CDS
CCACCAGAAATCATGTCAAG+AGG 0.590568 1:-27799462 None:intergenic
GATGGTGAAGAAGAGGATGA+TGG 0.592671 1:+27799966 MsG0180001827.01.T01:CDS
CGGAGGTGAAGTTGCCAAGG+AGG 0.593842 1:+27800078 MsG0180001827.01.T01:CDS
GTGGGATGGGGAAGATGATG+AGG 0.595645 1:+27799611 MsG0180001827.01.T01:CDS
CTGGCAATAGCAATTGGTGT+TGG 0.597010 1:+27801744 MsG0180001827.01.T01:CDS
ACGCACATGATTTGCAAAGG+TGG 0.599339 1:-27808255 None:intergenic
TATGCCCTGTTGATTATCCA+TGG 0.599483 1:+27802056 MsG0180001827.01.T01:CDS
GGAGGTGAAGTTGCCAAGGA+GGG 0.600925 1:+27800079 MsG0180001827.01.T01:CDS
GGACAATACAATCCTTCTAA+CGG 0.602074 1:+27799072 MsG0180001827.01.T01:CDS
GAGGTGATGAGAATACCAAA+AGG 0.602190 1:-27802021 None:intergenic
TTGCCAAGGAGGGTGCCGTA+TGG 0.604907 1:+27800089 MsG0180001827.01.T01:CDS
CAAGGATTTAGCTATAAGAG+TGG 0.606086 1:+27802508 MsG0180001827.01.T01:CDS
ATGAGAAGAAGGGAGAGTCA+AGG 0.607088 1:+27800012 MsG0180001827.01.T01:CDS
AGGGTTGACAAAGATGCAGA+TGG 0.609513 1:+27801160 MsG0180001827.01.T01:intron
GGGCATACACAATGATGAAG+AGG 0.609765 1:-27802040 None:intergenic
GTGTTGAAAGGTGAGGAAGT+TGG 0.610000 1:+27799885 MsG0180001827.01.T01:CDS
TGGCGGAGGTGAAGTTGCCA+AGG 0.613374 1:+27800075 MsG0180001827.01.T01:CDS
TGCAAAGGTGGGTAACACCT+CGG 0.623892 1:-27808243 None:intergenic
GTGAAGATAGATGTGTTGAA+AGG 0.624379 1:+27799873 MsG0180001827.01.T01:CDS
AGCACGCACATGATTTGCAA+AGG 0.625591 1:-27808258 None:intergenic
CTCTTATAGCTAAATCCTTG+AGG 0.633436 1:-27802505 None:intergenic
AAATTGAGGCCATCATCGAA+AGG 0.636223 1:-27801566 None:intergenic
GATAGATGTGTTGAAAGGTG+AGG 0.636429 1:+27799878 MsG0180001827.01.T01:CDS
CATGCACGCGATCAATGCGT+GGG 0.637360 1:+27799593 MsG0180001827.01.T01:CDS
TTGCTTGCATGAAGAATGCG+AGG 0.639037 1:-27801801 None:intergenic
AAACCTGTGAGTTTGTTGAA+GGG 0.643367 1:-27801993 None:intergenic
AATGCCAAAGATTTCAGGAG+TGG 0.648962 1:+27799851 MsG0180001827.01.T01:CDS
GCCGGAGTTTGAGATTGTGG+CGG 0.652926 1:+27800058 MsG0180001827.01.T01:CDS
TGATAAATGGTGATTACATG+GGG 0.658268 1:+27799790 MsG0180001827.01.T01:CDS
TGAAGATTAATATCAAAACT+GGG 0.668404 1:+27799721 MsG0180001827.01.T01:CDS
AGTGCGAAACCTAGATTTCG+GGG 0.669036 1:+27799767 MsG0180001827.01.T01:CDS
TCCAGATATGACACGTGCTG+CGG 0.676934 1:-27799052 None:intergenic
TGGCCAATACTAGGTTCAGG+AGG 0.678224 1:+27801949 MsG0180001827.01.T01:CDS
AATGGCAATAGCCTTTACAC+TGG 0.678535 1:+27801929 MsG0180001827.01.T01:CDS
ACCGCAACCATACCCGACCG+AGG 0.689633 1:+27808226 MsG0180001827.01.T01:CDS
TCTCTCCATTGAGCATACGA+TGG 0.695768 1:+27799662 MsG0180001827.01.T01:CDS
ATGGTGGCATAGGACCGTAA+CGG 0.707951 1:-27799296 None:intergenic
GGTTCCATGGATAATCAACA+GGG 0.719137 1:-27802060 None:intergenic
GACTCGTCACTAGCATAACG+AGG 0.742544 1:-27799534 None:intergenic
CGGCAGATAGGGATTCAAGG+AGG 0.752863 1:+27800967 MsG0180001827.01.T01:CDS
TGCAGATGGAAGAATCACCG+AGG 0.763636 1:+27801174 MsG0180001827.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTTTTATATTTTTT+TGG + Chr1:27806234-27806253 MsG0180001827.01.T01:intron 0.0%
!!! ATTTTTTTAATAATTAAAAA+AGG - Chr1:27807193-27807212 None:intergenic 0.0%
!!! TTATTTTTTTATATTTTTTT+GGG + Chr1:27806235-27806254 MsG0180001827.01.T01:intron 0.0%
!!! TTTTTTTAATAATTAAAAAA+GGG - Chr1:27807192-27807211 None:intergenic 0.0%
!! AATAAATATATAACTAAACA+CGG - Chr1:27806302-27806321 None:intergenic 10.0%
!! TTAAATATAAAAAAAATGAC+AGG + Chr1:27805310-27805329 MsG0180001827.01.T01:intron 10.0%
!!! ACTTATAATTTTTTATTTTG+AGG + Chr1:27806742-27806761 MsG0180001827.01.T01:intron 10.0%
!!! ATAAATATTTTTATATAGAC+CGG + Chr1:27805376-27805395 MsG0180001827.01.T01:intron 10.0%
!!! ATTATAAGTATTTTTTTTGT+AGG - Chr1:27806731-27806750 None:intergenic 10.0%
!!! CTTATAATTTTTTATTTTGA+GGG + Chr1:27806743-27806762 MsG0180001827.01.T01:intron 10.0%
!!! TACAATTATTTTTGTTTATA+CGG + Chr1:27800196-27800215 MsG0180001827.01.T01:intron 10.0%
!!! TAGATAAAGATTTTTTTATA+GGG - Chr1:27805769-27805788 None:intergenic 10.0%
!!! TTAAACAATATTTTCTAAAA+TGG - Chr1:27807604-27807623 None:intergenic 10.0%
!!! TTAGATAAAGATTTTTTTAT+AGG - Chr1:27805770-27805789 None:intergenic 10.0%
!!! TTATAAGTATTTTTTTTGTA+GGG - Chr1:27806730-27806749 None:intergenic 10.0%
!!! TTCATGAAAAATAAATTTTT+TGG + Chr1:27806320-27806339 MsG0180001827.01.T01:intron 10.0%
!!! TTTTTATCTTCTTAATAATT+TGG + Chr1:27807811-27807830 MsG0180001827.01.T01:intron 10.0%
!! AAAAAATAAAAAAATCCTTG+TGG + Chr1:27805508-27805527 MsG0180001827.01.T01:intron 15.0%
!! AAAAATAAAAAAATCCTTGT+GGG + Chr1:27805509-27805528 MsG0180001827.01.T01:intron 15.0%
!! AAACAATTACTGAAATAAAT+GGG + Chr1:27800220-27800239 MsG0180001827.01.T01:intron 15.0%
!! AAATAAAAAAGAAAAAGAAG+AGG + Chr1:27804359-27804378 MsG0180001827.01.T01:intron 15.0%
!! ACTAGAAAAATATTATCATT+GGG - Chr1:27806437-27806456 None:intergenic 15.0%
!! ATAAAAATATTCCAAAGTAA+GGG - Chr1:27802140-27802159 None:intergenic 15.0%
!! ATTGTAAAACAAGTTATTTA+TGG - Chr1:27803624-27803643 None:intergenic 15.0%
!! ATTGTAAAACAGATTATTTA+TGG - Chr1:27803200-27803219 None:intergenic 15.0%
!! ATTGTAAATCAGATTATTTA+TGG - Chr1:27803836-27803855 None:intergenic 15.0%
!! TAAACAAATTACTTACTATA+TGG + Chr1:27802339-27802358 MsG0180001827.01.T01:intron 15.0%
!! TAAACAATTACTGAAATAAA+TGG + Chr1:27800219-27800238 MsG0180001827.01.T01:intron 15.0%
!! TAAATAATCTGATTTACAAT+CGG + Chr1:27803836-27803855 MsG0180001827.01.T01:intron 15.0%
!! TAAATATCATCCAAAAAATA+TGG - Chr1:27807465-27807484 None:intergenic 15.0%
!! TACTAGAAAAATATTATCAT+TGG - Chr1:27806438-27806457 None:intergenic 15.0%
!! TATAAAAATATTCCAAAGTA+AGG - Chr1:27802141-27802160 None:intergenic 15.0%
!! TATTATGTTATGTACTAATT+CGG + Chr1:27802588-27802607 MsG0180001827.01.T01:CDS 15.0%
!! TCTAATTTATGAAAAAATAG+TGG + Chr1:27803041-27803060 MsG0180001827.01.T01:intron 15.0%
!! TTTCGAAGAAAAAAAAAATA+GGG - Chr1:27807758-27807777 None:intergenic 15.0%
!!! AGAAAAGTATTTTATTTGAT+AGG + Chr1:27807577-27807596 MsG0180001827.01.T01:intron 15.0%
!!! ATTGTATTTTATTTTGTTAG+GGG + Chr1:27807364-27807383 MsG0180001827.01.T01:intron 15.0%
!!! GATTGTATTTTATTTTGTTA+GGG + Chr1:27807363-27807382 MsG0180001827.01.T01:intron 15.0%
!!! TAAAATAATAGATTTTGCTT+TGG + Chr1:27807621-27807640 MsG0180001827.01.T01:intron 15.0%
!!! TAAATAACTTGTTTTACAAT+CGG + Chr1:27803624-27803643 MsG0180001827.01.T01:intron 15.0%
!!! TAAATAATCTGTTTTACAAT+CGG + Chr1:27803200-27803219 MsG0180001827.01.T01:intron 15.0%
!!! TAAATATTTTTATATAGACC+GGG + Chr1:27805377-27805396 MsG0180001827.01.T01:intron 15.0%
!!! TTAAGAGTTAAATATGTTTT+TGG + Chr1:27806648-27806667 MsG0180001827.01.T01:intron 15.0%
!!! TTTCATTCATAATGTAATTT+TGG + Chr1:27805351-27805370 MsG0180001827.01.T01:intron 15.0%
!!! TTTTCGAAGAAAAAAAAAAT+AGG - Chr1:27807759-27807778 None:intergenic 15.0%
!! AAAACGATATTATTTACATC+TGG - Chr1:27803336-27803355 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + Chr1:27807057-27807076 MsG0180001827.01.T01:intron 20.0%
!! AAACGATATTATTTACATCT+GGG - Chr1:27803335-27803354 None:intergenic 20.0%
!! AAATCATATATTCCAAATTG+AGG + Chr1:27807727-27807746 MsG0180001827.01.T01:intron 20.0%
!! AAATTACCTTGTTAAAATTG+AGG - Chr1:27801583-27801602 None:intergenic 20.0%
!! AACAATTACTGAAATAAATG+GGG + Chr1:27800221-27800240 MsG0180001827.01.T01:intron 20.0%
!! AGAGCTATTAAAATTAAGTA+AGG + Chr1:27807118-27807137 MsG0180001827.01.T01:intron 20.0%
!! ATATAAACTAGCCAAATATA+TGG - Chr1:27803522-27803541 None:intergenic 20.0%
!! ATATTTGACAAAACTATTCT+CGG + Chr1:27806398-27806417 MsG0180001827.01.T01:intron 20.0%
!! ATTGTAAAACAGGTTATTTA+TGG - Chr1:27803412-27803431 None:intergenic 20.0%
!! CATTCTAATTTACGAAAAAA+TGG + Chr1:27802911-27802930 MsG0180001827.01.T01:intron 20.0%
!! GGTTATATTGTTCATTTATT+TGG + Chr1:27802954-27802973 MsG0180001827.01.T01:intron 20.0%
!! TAAAACAAGTTATTTATGGT+TGG - Chr1:27803620-27803639 None:intergenic 20.0%
!! TAAAACAGATTATTTATGGT+TGG - Chr1:27803196-27803215 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + Chr1:27807056-27807075 MsG0180001827.01.T01:intron 20.0%
!! TAAATCAGATTATTTATGGT+TGG - Chr1:27803832-27803851 None:intergenic 20.0%
!! TCCAATTTATGAAAAAATAG+TGG + Chr1:27803465-27803484 MsG0180001827.01.T01:intron 20.0%
!! TGAAGATTAATATCAAAACT+GGG + Chr1:27799721-27799740 MsG0180001827.01.T01:CDS 20.0%
!!! AAAAAGTTCCCAATTTTATA+GGG - Chr1:27806675-27806694 None:intergenic 20.0%
!!! AAACAAACTTTAAGAGTTTA+AGG - Chr1:27806821-27806840 None:intergenic 20.0%
!!! AAATTTTTCCTTCAATTTGT+GGG + Chr1:27800760-27800779 MsG0180001827.01.T01:intron 20.0%
!!! AACATACTATGTTTTAAAGA+TGG + Chr1:27805129-27805148 MsG0180001827.01.T01:intron 20.0%
!!! AAGATTTTTTTTGTACAACA+CGG - Chr1:27805610-27805629 None:intergenic 20.0%
!!! AATACTTGTTCCATATTTTT+TGG + Chr1:27807452-27807471 MsG0180001827.01.T01:intron 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + Chr1:27806962-27806981 MsG0180001827.01.T01:intron 20.0%
!!! ACCACTATTTTTTCATAAAT+TGG - Chr1:27803045-27803064 None:intergenic 20.0%
!!! ATATAACCATAATTTGTCAA+AGG - Chr1:27802942-27802961 None:intergenic 20.0%
!!! ATTGCATTTTATTTAGTTAG+GGG - Chr1:27806530-27806549 None:intergenic 20.0%
!!! CATTATGAATGAAATTTTGA+TGG - Chr1:27805345-27805364 None:intergenic 20.0%
!!! GATGTAAATAATATCGTTTT+AGG + Chr1:27803336-27803355 MsG0180001827.01.T01:intron 20.0%
!!! GATGTAAATAATTTCGTTTT+AGG + Chr1:27803548-27803567 MsG0180001827.01.T01:intron 20.0%
!!! GATTGCATTTTATTTAGTTA+GGG - Chr1:27806531-27806550 None:intergenic 20.0%
!!! GGATTGTATTTTATTTTGTT+AGG + Chr1:27807362-27807381 MsG0180001827.01.T01:intron 20.0%
!!! GTGAAAACAATATCATTTTA+AGG - Chr1:27802728-27802747 None:intergenic 20.0%
!!! TAAAAAGTTCCCAATTTTAT+AGG - Chr1:27806676-27806695 None:intergenic 20.0%
!!! TAAAGATTTTTTTATAGGGA+CGG - Chr1:27805765-27805784 None:intergenic 20.0%
!!! TAAATAACCTGTTTTACAAT+CGG + Chr1:27803412-27803431 MsG0180001827.01.T01:intron 20.0%
!!! TATAATTTTCCACTTATATC+CGG + Chr1:27800263-27800282 MsG0180001827.01.T01:intron 20.0%
!!! TATCATTTTAAGGCATTTTA+AGG - Chr1:27802718-27802737 None:intergenic 20.0%
!!! TTGTATTTTATTTTGTTAGG+GGG + Chr1:27807365-27807384 MsG0180001827.01.T01:intron 20.0%
!!! TTTTTAGTCCCTATAAAATT+GGG - Chr1:27807160-27807179 None:intergenic 20.0%
! AAAACGATATTATTTACACC+TGG - Chr1:27803124-27803143 None:intergenic 25.0%
! AAAACGATATTATTTACGTC+TGG - Chr1:27803760-27803779 None:intergenic 25.0%
! AAACGATATTATTTACACCT+GGG - Chr1:27803123-27803142 None:intergenic 25.0%
! AAACGATATTATTTACGTCT+GGG - Chr1:27803759-27803778 None:intergenic 25.0%
! AAACGGAAATAGGTTAAAAA+TGG - Chr1:27799318-27799337 None:intergenic 25.0%
! AAGTAAGGACTAAACTTAAA+AGG + Chr1:27807133-27807152 MsG0180001827.01.T01:intron 25.0%
! AATAATCCATGAAAACCATA+CGG - Chr1:27800107-27800126 None:intergenic 25.0%
! ACATGAAAGGAAAAAAAACA+TGG - Chr1:27802871-27802890 None:intergenic 25.0%
! AGAAAAACTAGCCAAATATA+TGG - Chr1:27803098-27803117 None:intergenic 25.0%
! AGATCAAAAGTAACAAAATC+TGG + Chr1:27806927-27806946 MsG0180001827.01.T01:intron 25.0%
! AGTTTCAGACAAAAAAAATG+AGG - Chr1:27800640-27800659 None:intergenic 25.0%
! ATATGGTATGAAAATACACA+TGG + Chr1:27802356-27802375 MsG0180001827.01.T01:intron 25.0%
! ATTAAATACTATTTGCTCTG+TGG + Chr1:27801313-27801332 MsG0180001827.01.T01:intron 25.0%
! ATTTACTCATATCATCTACA+TGG - Chr1:27802670-27802689 None:intergenic 25.0%
! ATTTGTAAGTTTGAACGTAA+CGG - Chr1:27798939-27798958 None:intergenic 25.0%
! CATTTCATTGTCAAATTTGA+AGG + Chr1:27802438-27802457 MsG0180001827.01.T01:intron 25.0%
! CCTATATTGCACAAATTTAA+AGG - Chr1:27801392-27801411 None:intergenic 25.0%
! CCTTTAAATTTGTGCAATAT+AGG + Chr1:27801389-27801408 MsG0180001827.01.T01:intron 25.0%
! GAATTCAGAAAAAATGGATA+TGG - Chr1:27803992-27804011 None:intergenic 25.0%
! GTAATTTCTAAGTGTTTCTT+TGG + Chr1:27800879-27800898 MsG0180001827.01.T01:intron 25.0%
! GTCTATACAACAAATGTTAT+TGG - Chr1:27805743-27805762 None:intergenic 25.0%
! GTGAAGATTAATATCAAAAC+TGG + Chr1:27799720-27799739 MsG0180001827.01.T01:CDS 25.0%
! GTTACATAGTCAACAAAAAA+CGG - Chr1:27805060-27805079 None:intergenic 25.0%
! TGAAACACTTAAATTGAACA+TGG + Chr1:27801469-27801488 MsG0180001827.01.T01:intron 25.0%
! TGTATGAGCTAATTTGAATT+TGG + Chr1:27805207-27805226 MsG0180001827.01.T01:intron 25.0%
! TGTTGAAATTACTTCTGTTA+AGG + Chr1:27802382-27802401 MsG0180001827.01.T01:intron 25.0%
! TTGACAACAATATGTTTGAT+GGG - Chr1:27804447-27804466 None:intergenic 25.0%
! TTTAAATACTATTTGCTCTG+TGG + Chr1:27801341-27801360 MsG0180001827.01.T01:intron 25.0%
! TTTAGTAAATGAACCTTTGA+TGG - Chr1:27806846-27806865 None:intergenic 25.0%
! TTTGACAACAATATGTTTGA+TGG - Chr1:27804448-27804467 None:intergenic 25.0%
!! AAAGAATAGGTTTGTTTATG+CGG + Chr1:27799815-27799834 MsG0180001827.01.T01:CDS 25.0%
!! AAAGTTTGTTTAACCATCAA+AGG + Chr1:27806830-27806849 MsG0180001827.01.T01:intron 25.0%
!! ATTGAGTTTTCACTGTTTAA+GGG - Chr1:27800551-27800570 None:intergenic 25.0%
!! CAAATTTTTCCTTCAATTTG+TGG + Chr1:27800759-27800778 MsG0180001827.01.T01:intron 25.0%
!! GACGTAAATAATATCGTTTT+AGG + Chr1:27803760-27803779 MsG0180001827.01.T01:intron 25.0%
!! GGAAAAAAAATCACGAATTT+TGG - Chr1:27807870-27807889 None:intergenic 25.0%
!! GGTGTAAATAATATCGTTTT+AGG + Chr1:27803124-27803143 MsG0180001827.01.T01:intron 25.0%
!! GTCTTATCATTTACAACTTT+TGG - Chr1:27804970-27804989 None:intergenic 25.0%
!! GTGTTGAATTGATTGTTATT+GGG - Chr1:27808014-27808033 None:intergenic 25.0%
!! GTTTATGAATCTTTTTCCAA+CGG - Chr1:27800313-27800332 None:intergenic 25.0%
!! TAAAAAGTATGCTGTGTTTA+CGG + Chr1:27799419-27799438 MsG0180001827.01.T01:CDS 25.0%
!! TAAAAGGTCCCAATTTTATA+GGG + Chr1:27807149-27807168 MsG0180001827.01.T01:intron 25.0%
!! TAGTATGTTCTAAACATTGT+TGG - Chr1:27805118-27805137 None:intergenic 25.0%
!! TTAAAAGGTCCCAATTTTAT+AGG + Chr1:27807148-27807167 MsG0180001827.01.T01:intron 25.0%
!! TTAGTCTTTGATTAGTGAAA+TGG + Chr1:27807986-27808005 MsG0180001827.01.T01:intron 25.0%
!! TTTTGGATGATATTTATCGT+TGG + Chr1:27807469-27807488 MsG0180001827.01.T01:intron 25.0%
!!! AAACAAACTTAGTTTTAGCA+GGG - Chr1:27806792-27806811 None:intergenic 25.0%
!!! ACTAGTTTTAAACACATGAA+AGG - Chr1:27802884-27802903 None:intergenic 25.0%
!!! AGATTTTTTTTGTACAACAC+GGG - Chr1:27805609-27805628 None:intergenic 25.0%
!!! ATGTTTCGAAAAAGTGTTTA+GGG + Chr1:27807699-27807718 MsG0180001827.01.T01:intron 25.0%
!!! CAACATTGATTTTGATTACA+GGG + Chr1:27801141-27801160 MsG0180001827.01.T01:intron 25.0%
!!! CTTGTTATGTATTTTTTGAG+AGG + Chr1:27807546-27807565 MsG0180001827.01.T01:intron 25.0%
!!! GGATTGCATTTTATTTAGTT+AGG - Chr1:27806532-27806551 None:intergenic 25.0%
!!! GTTTTTAGTCCCTATAAAAT+TGG - Chr1:27807161-27807180 None:intergenic 25.0%
!!! TAAACAAACTTAGTTTTAGC+AGG - Chr1:27806793-27806812 None:intergenic 25.0%
!!! TATGTTTCGAAAAAGTGTTT+AGG + Chr1:27807698-27807717 MsG0180001827.01.T01:intron 25.0%
!!! TCAACAATCATATTTTGGTT+GGG - Chr1:27808137-27808156 None:intergenic 25.0%
!!! TTTTCATGGATTATTTGTGA+AGG + Chr1:27800112-27800131 MsG0180001827.01.T01:CDS 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG + Chr1:27806664-27806683 MsG0180001827.01.T01:intron 25.0%
AACCAAACTTTACTTGACTA+AGG + Chr1:27802079-27802098 MsG0180001827.01.T01:CDS 30.0%
AACTTTACTTGACTAAGGAA+TGG + Chr1:27802084-27802103 MsG0180001827.01.T01:CDS 30.0%
AAGATCTGCATATAAAGTGA+TGG + Chr1:27801414-27801433 MsG0180001827.01.T01:intron 30.0%
AATAGGGAATAACCTCAATT+TGG - Chr1:27807742-27807761 None:intergenic 30.0%
AATCTTTGTGTAAGAAAGAG+AGG + Chr1:27805624-27805643 MsG0180001827.01.T01:intron 30.0%
AATTATCTTGTCACTCTTGA+TGG - Chr1:27801621-27801640 None:intergenic 30.0%
AATTCTAATGGTTGTGCTAA+TGG + Chr1:27801911-27801930 MsG0180001827.01.T01:CDS 30.0%
AGAAAATGAGAAGAGATAGT+TGG - Chr1:27804020-27804039 None:intergenic 30.0%
AGATCTGCATATAAAGTGAT+GGG + Chr1:27801415-27801434 MsG0180001827.01.T01:intron 30.0%
AGTGTTGTATATTTAACCGT+TGG + Chr1:27800294-27800313 MsG0180001827.01.T01:intron 30.0%
AGTTAGCCATATCATATACA+TGG - Chr1:27802614-27802633 None:intergenic 30.0%
ATATTTCTCAGGGGTAAAAT+TGG + Chr1:27803961-27803980 MsG0180001827.01.T01:intron 30.0%
ATGATGTGAAATTGTCATGT+AGG + Chr1:27805805-27805824 MsG0180001827.01.T01:intron 30.0%
ATTAATATGTCAAAGCCTCA+AGG + Chr1:27802490-27802509 MsG0180001827.01.T01:CDS 30.0%
ATTACATGGGGAAAAAGAAT+AGG + Chr1:27799802-27799821 MsG0180001827.01.T01:CDS 30.0%
ATTTGCATCAAAACGGAAAT+AGG - Chr1:27799328-27799347 None:intergenic 30.0%
CAAACTAACGTTGTATTCAA+AGG - Chr1:27804759-27804778 None:intergenic 30.0%
CAACCAAAATATGATTGTTG+AGG + Chr1:27808136-27808155 MsG0180001827.01.T01:CDS 30.0%
CAATAAACTATTTATGCCCA+TGG - Chr1:27805008-27805027 None:intergenic 30.0%
CAGTGCAGGAAAAAAAATTA+GGG + Chr1:27807089-27807108 MsG0180001827.01.T01:intron 30.0%
CCTGTAATCAAAATCAATGT+TGG - Chr1:27801143-27801162 None:intergenic 30.0%
CGTGTTGAATTGATTGTTAT+TGG - Chr1:27808015-27808034 None:intergenic 30.0%
GAGCTAATTTGAATTTGGAT+TGG + Chr1:27805212-27805231 MsG0180001827.01.T01:intron 30.0%
GATTAACAAGATCCAGTTTA+GGG + Chr1:27800993-27801012 MsG0180001827.01.T01:CDS 30.0%
GCACAAATTTAAAGGCAAAT+AGG - Chr1:27801384-27801403 None:intergenic 30.0%
GGTCATACAAACCATATATT+TGG + Chr1:27803931-27803950 MsG0180001827.01.T01:intron 30.0%
GGTTACACACTTCAAATATT+TGG - Chr1:27802828-27802847 None:intergenic 30.0%
GTCACGTATTTGTAAAAATG+TGG + Chr1:27803275-27803294 MsG0180001827.01.T01:intron 30.0%
GTGATAAATGGTGATTACAT+GGG + Chr1:27799789-27799808 MsG0180001827.01.T01:CDS 30.0%
GTTGACTATGTAACTTACTT+GGG + Chr1:27805066-27805085 MsG0180001827.01.T01:intron 30.0%
GTTTCTTTGGATTCAATTGT+AGG + Chr1:27800892-27800911 MsG0180001827.01.T01:intron 30.0%
TAAACAGTGAAAACTCAATC+TGG + Chr1:27800552-27800571 MsG0180001827.01.T01:intron 30.0%
TAACACCATTTGCATCAAAA+CGG - Chr1:27799335-27799354 None:intergenic 30.0%
TAAGCTTGATTTCATAAGGA+AGG - Chr1:27799164-27799183 None:intergenic 30.0%
TAAGGAATGGAACCATAAAA+CGG + Chr1:27802097-27802116 MsG0180001827.01.T01:CDS 30.0%
TAGTAATGTTCCAAACATGT+CGG + Chr1:27806994-27807013 MsG0180001827.01.T01:intron 30.0%
TATGCATTAGTCATGTTTGT+AGG + Chr1:27801666-27801685 MsG0180001827.01.T01:intron 30.0%
TATTATGTGCTTTGTAGACT+TGG + Chr1:27802208-27802227 MsG0180001827.01.T01:intron 30.0%
TGATAAATGGTGATTACATG+GGG + Chr1:27799790-27799809 MsG0180001827.01.T01:CDS 30.0%
TGTTAAACATAACGATGTTC+CGG + Chr1:27799350-27799369 MsG0180001827.01.T01:CDS 30.0%
TTCATTGTCAAATTTGAAGG+TGG + Chr1:27802441-27802460 MsG0180001827.01.T01:intron 30.0%
TTCCTTAGTCAAGTAAAGTT+TGG - Chr1:27802084-27802103 None:intergenic 30.0%
! AAAGAAATTGTTGTTGAGAG+TGG - Chr1:27804321-27804340 None:intergenic 30.0%
! ATTTTGTCAAATCTTGGGAA+GGG + Chr1:27801880-27801899 MsG0180001827.01.T01:CDS 30.0%
! CATCCTCAACAATCATATTT+TGG - Chr1:27808142-27808161 None:intergenic 30.0%
! GATTGAGTTTTCACTGTTTA+AGG - Chr1:27800552-27800571 None:intergenic 30.0%
! GGTAACAAACTTTTTGCTTT+AGG + Chr1:27799129-27799148 MsG0180001827.01.T01:CDS 30.0%
! GTGTAACCACAATTTTACAA+AGG + Chr1:27802840-27802859 MsG0180001827.01.T01:intron 30.0%
! TAAAGGCTTAATAGCAGTTT+TGG + Chr1:27806472-27806491 MsG0180001827.01.T01:intron 30.0%
! TGTTGACTATGTAACTTACT+TGG + Chr1:27805065-27805084 MsG0180001827.01.T01:intron 30.0%
! TTTGGTTGGGAAATTGATTT+GGG - Chr1:27808124-27808143 None:intergenic 30.0%
! TTTTTCTTCGAAAAAACACG+TGG + Chr1:27807765-27807784 MsG0180001827.01.T01:intron 30.0%
!! AATTGGCTTAATAGCAGTTT+TGG - Chr1:27807422-27807441 None:intergenic 30.0%
!! ATTTGGGTGTTGATAATTGT+TGG - Chr1:27808075-27808094 None:intergenic 30.0%
!! CAATGTTGGTGATATGTTTA+TGG - Chr1:27801129-27801148 None:intergenic 30.0%
!! CACAGCATACTTTTTAGTAA+TGG - Chr1:27799415-27799434 None:intergenic 30.0%
!! TATTTCCGTTTTGATGCAAA+TGG + Chr1:27799327-27799346 MsG0180001827.01.T01:CDS 30.0%
!! TGGCTAGTTTATATTTCTCA+GGG + Chr1:27803528-27803547 MsG0180001827.01.T01:intron 30.0%
!! TTGGCTAGTTTATATTTCTC+AGG + Chr1:27803527-27803546 MsG0180001827.01.T01:intron 30.0%
!! TTTGGGTGTTGATAATTGTT+GGG - Chr1:27808074-27808093 None:intergenic 30.0%
!! TTTTCCGTTTGAGATTGTAA+TGG - Chr1:27798902-27798921 None:intergenic 30.0%
!! TTTTGGTTGGGAAATTGATT+TGG - Chr1:27808125-27808144 None:intergenic 30.0%
!!! ACACTTTTTCGAAACATAAG+TGG - Chr1:27807696-27807715 None:intergenic 30.0%
!!! CACTTTTTCGAAACATAAGT+GGG - Chr1:27807695-27807714 None:intergenic 30.0%
!!! CCAACATTGATTTTGATTAC+AGG + Chr1:27801140-27801159 MsG0180001827.01.T01:intron 30.0%
!!! CTCAACAATCATATTTTGGT+TGG - Chr1:27808138-27808157 None:intergenic 30.0%
!!! GGATGTCTTTTTAGAGTTAA+AGG + Chr1:27805826-27805845 MsG0180001827.01.T01:intron 30.0%
!!! GGGATTTTGTGTTTTGAAAA+TGG + Chr1:27800801-27800820 MsG0180001827.01.T01:intron 30.0%
!!! GTGACCAATGTTTTAAAACT+CGG - Chr1:27805480-27805499 None:intergenic 30.0%
!!! GTTGATAATTGTTGGGATTT+TGG - Chr1:27808067-27808086 None:intergenic 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG + Chr1:27806663-27806682 MsG0180001827.01.T01:intron 30.0%
AAAAATACCCATGCCACATA+AGG - Chr1:27800366-27800385 None:intergenic 35.0%
AAAATACCCATGCCACATAA+GGG - Chr1:27800365-27800384 None:intergenic 35.0%
AAACAAAGCCAAACTTGTGT+TGG - Chr1:27799109-27799128 None:intergenic 35.0%
AAAGTCTGTGCGAATATTGA+AGG + Chr1:27802299-27802318 MsG0180001827.01.T01:CDS 35.0%
AAATGAGAAGAGATAGTTGG+AGG - Chr1:27804017-27804036 None:intergenic 35.0%
AACAAACTAATCCTACATCG+TGG + Chr1:27804825-27804844 MsG0180001827.01.T01:intron 35.0%
AACGGTGATATCCAAACAAT+CGG + Chr1:27799189-27799208 MsG0180001827.01.T01:CDS 35.0%
AAGCACATAAGGACAAAGTT+TGG + Chr1:27808335-27808354 MsG0180001827.01.T01:CDS 35.0%
AAGTCTCTCCAATGCATAAA+TGG - Chr1:27802256-27802275 None:intergenic 35.0%
AATATTGACATGTGTCCACT+TGG - Chr1:27804624-27804643 None:intergenic 35.0%
AATCCAATGCCAAAGATTTC+AGG + Chr1:27799846-27799865 MsG0180001827.01.T01:CDS 35.0%
AATCCTCTTGACATGATTTC+TGG + Chr1:27799459-27799478 MsG0180001827.01.T01:CDS 35.0%
AATGAGAAGAGATAGTTGGA+GGG - Chr1:27804016-27804035 None:intergenic 35.0%
AATGGAACCATAAAACGGTT+AGG + Chr1:27802102-27802121 MsG0180001827.01.T01:intron 35.0%
ACAAAATGCCAGTAACTTGA+TGG - Chr1:27801867-27801886 None:intergenic 35.0%
ACACATGTCAATATTCTGTG+TGG + Chr1:27804629-27804648 MsG0180001827.01.T01:intron 35.0%
ACTATGACAATTTGACTCCA+TGG + Chr1:27804988-27805007 MsG0180001827.01.T01:intron 35.0%
ACTGCTCATCCTAAAATTGA+CGG + Chr1:27799249-27799268 MsG0180001827.01.T01:CDS 35.0%
AGAGCTAGAGAGAAAAAGAA+AGG - Chr1:27806038-27806057 None:intergenic 35.0%
AGGAAGAGGTAAAAGATGTA+TGG + Chr1:27801194-27801213 MsG0180001827.01.T01:CDS 35.0%
AGGATTGAATGAAGAGTCAA+AGG + Chr1:27800912-27800931 MsG0180001827.01.T01:intron 35.0%
ATACTATTTGCTCTGTGGAT+TGG + Chr1:27801318-27801337 MsG0180001827.01.T01:intron 35.0%
ATAGCACTTGGGTTATATTG+GGG - Chr1:27805698-27805717 None:intergenic 35.0%
ATCCAAGTCTCTGTTTATAG+AGG - Chr1:27807891-27807910 None:intergenic 35.0%
ATCGCAACTTACTGATACTT+AGG - Chr1:27806501-27806520 None:intergenic 35.0%
ATCTGCATATAAAGTGATGG+GGG + Chr1:27801417-27801436 MsG0180001827.01.T01:intron 35.0%
ATGAGACCAAAACTGCAAAA+AGG - Chr1:27806572-27806591 None:intergenic 35.0%
ATTCGGCCATGTATATGATA+TGG + Chr1:27802605-27802624 MsG0180001827.01.T01:intron 35.0%
ATTGTTTGGATATCACCGTT+TGG - Chr1:27799189-27799208 None:intergenic 35.0%
CAAGGATTTAGCTATAAGAG+TGG + Chr1:27802508-27802527 MsG0180001827.01.T01:CDS 35.0%
CACTAGTACTACAAACCAAA+CGG - Chr1:27804706-27804725 None:intergenic 35.0%
CATAATTTCTACCACGATGT+AGG - Chr1:27804839-27804858 None:intergenic 35.0%
CCAGTGCAGGAAAAAAAATT+AGG + Chr1:27807088-27807107 MsG0180001827.01.T01:intron 35.0%
CCATCAAAAGTTTCAAGGAT+CGG + Chr1:27799504-27799523 MsG0180001827.01.T01:CDS 35.0%
CGATTAACAAGATCCAGTTT+AGG + Chr1:27800992-27801011 MsG0180001827.01.T01:CDS 35.0%
CGGAAATAGGTTAAAAATGG+TGG - Chr1:27799315-27799334 None:intergenic 35.0%
CTATGACAATTTGACTCCAT+GGG + Chr1:27804989-27805008 MsG0180001827.01.T01:intron 35.0%
CTCTTATAGCTAAATCCTTG+AGG - Chr1:27802508-27802527 None:intergenic 35.0%
GAAAGTCACTTGTGATATTG+TGG + Chr1:27805542-27805561 MsG0180001827.01.T01:intron 35.0%
GAAATCAAGCTTACACCAAA+CGG + Chr1:27799171-27799190 MsG0180001827.01.T01:CDS 35.0%
GAGACTTGGATCATTTGATT+TGG + Chr1:27807900-27807919 MsG0180001827.01.T01:intron 35.0%
GAGGGTGAATTCAGAAAAAA+TGG - Chr1:27803998-27804017 None:intergenic 35.0%
GATACACATACAACCTTATG+TGG - Chr1:27804672-27804691 None:intergenic 35.0%
GATAGCACTTGGGTTATATT+GGG - Chr1:27805699-27805718 None:intergenic 35.0%
GATCTGCATATAAAGTGATG+GGG + Chr1:27801416-27801435 MsG0180001827.01.T01:intron 35.0%
GCAAACAGGCAATAAGATAA+TGG - Chr1:27801495-27801514 None:intergenic 35.0%
GCGAAATCATGAAGAAAAGA+AGG - Chr1:27799393-27799412 None:intergenic 35.0%
GGACAATACAATCCTTCTAA+CGG + Chr1:27799072-27799091 MsG0180001827.01.T01:CDS 35.0%
GGTCATACAGACCATATATT+TGG + Chr1:27803084-27803103 MsG0180001827.01.T01:intron 35.0%
GGTGATAAATGGTGATTACA+TGG + Chr1:27799788-27799807 MsG0180001827.01.T01:CDS 35.0%
GGTGTAAGCTTGATTTCATA+AGG - Chr1:27799168-27799187 None:intergenic 35.0%
GGTTTGAGGGTTGTAATTTA+GGG + Chr1:27800781-27800800 MsG0180001827.01.T01:intron 35.0%
GTCACGCATATGTAAAAATG+TGG + Chr1:27803063-27803082 MsG0180001827.01.T01:intron 35.0%
GTGAAGATAGATGTGTTGAA+AGG + Chr1:27799873-27799892 MsG0180001827.01.T01:CDS 35.0%
GTTACGCCTTTGACAAATTA+TGG + Chr1:27802933-27802952 MsG0180001827.01.T01:intron 35.0%
GTTACGCCTTTGTAAAATTG+TGG - Chr1:27802849-27802868 None:intergenic 35.0%
GTTTGCCGTTAAAATCTTGA+CGG - Chr1:27799215-27799234 None:intergenic 35.0%
TACAAAATCGAAAACGAAGC+TGG + Chr1:27798958-27798977 MsG0180001827.01.T01:CDS 35.0%
TACAATCCTTCTAACGGAAT+TGG + Chr1:27799078-27799097 MsG0180001827.01.T01:CDS 35.0%
TACTCATATCATCTACATGG+TGG - Chr1:27802667-27802686 None:intergenic 35.0%
TAGAATGTCTCACTGACAAT+TGG - Chr1:27803025-27803044 None:intergenic 35.0%
TAGGTTAAAAATGGTGGCAT+AGG - Chr1:27799309-27799328 None:intergenic 35.0%
TATACAACACTCTACCTTAC+CGG - Chr1:27800285-27800304 None:intergenic 35.0%
TATGTGCATGATGAGAAGAA+GGG + Chr1:27800002-27800021 MsG0180001827.01.T01:CDS 35.0%
TCCAATGCATAAATGGTGAT+GGG - Chr1:27802249-27802268 None:intergenic 35.0%
TCGCAACTTACTGATACTTA+GGG - Chr1:27806500-27806519 None:intergenic 35.0%
TGAAACCAGAAAACACGTTT+GGG - Chr1:27798996-27799015 None:intergenic 35.0%
TGAGACCAAAACTGCAAAAA+GGG - Chr1:27806571-27806590 None:intergenic 35.0%
TGATTCTCCATCTTTGTTGA+AGG + Chr1:27800724-27800743 MsG0180001827.01.T01:intron 35.0%
TGCAATTCGTAATGAGCATT+TGG - Chr1:27808302-27808321 None:intergenic 35.0%
TGTTTATCCTGGAAATGTGT+TGG + Chr1:27802465-27802484 MsG0180001827.01.T01:CDS 35.0%
TTAATTGCCAACACATTTCC+AGG - Chr1:27802475-27802494 None:intergenic 35.0%
TTATGTGCATGATGAGAAGA+AGG + Chr1:27800001-27800020 MsG0180001827.01.T01:CDS 35.0%
TTCCTCTATAAACAGAGACT+TGG + Chr1:27807886-27807905 MsG0180001827.01.T01:intron 35.0%
TTGAAACCAGAAAACACGTT+TGG - Chr1:27798997-27799016 None:intergenic 35.0%
TTTGTAGACTTGGATGTATC+TGG + Chr1:27802218-27802237 MsG0180001827.01.T01:intron 35.0%
! AAAACACGTTTGGGATAAGT+TGG - Chr1:27798987-27799006 None:intergenic 35.0%
! AAGAAAAGAAGGTCTTGTCA+TGG - Chr1:27799382-27799401 None:intergenic 35.0%
! AATGTGTTTGTGTGTTGTTG+TGG - Chr1:27804940-27804959 None:intergenic 35.0%
! ACATATCACTTTCCTTTTCC+TGG + Chr1:27805862-27805881 MsG0180001827.01.T01:intron 35.0%
! ACTGGCATTTTGTCAAATCT+TGG + Chr1:27801874-27801893 MsG0180001827.01.T01:CDS 35.0%
! AGAAGAGGATGATGGTTATT+TGG + Chr1:27799974-27799993 MsG0180001827.01.T01:CDS 35.0%
! ATTTTTGCAGATGATAGCTC+TGG + Chr1:27801725-27801744 MsG0180001827.01.T01:intron 35.0%
! CATTTTGTCAAATCTTGGGA+AGG + Chr1:27801879-27801898 MsG0180001827.01.T01:CDS 35.0%
! CTGGCATTTTGTCAAATCTT+GGG + Chr1:27801875-27801894 MsG0180001827.01.T01:CDS 35.0%
! GAAACTTTTGCTTTCCGTTA+CGG + Chr1:27799282-27799301 MsG0180001827.01.T01:CDS 35.0%
! GGTTGGAAATGCTTTTAGTA+CGG - Chr1:27803815-27803834 None:intergenic 35.0%
! GTATCAGTAAGTTGCGATTT+TGG + Chr1:27806503-27806522 MsG0180001827.01.T01:intron 35.0%
! GTTGGTTGGGAAATTGATTT+GGG - Chr1:27808091-27808110 None:intergenic 35.0%
! GTTGTTTCACTCTCTATTGT+CGG + Chr1:27800687-27800706 MsG0180001827.01.T01:intron 35.0%
! TACATCTTTTACCTCTTCCT+CGG - Chr1:27801194-27801213 None:intergenic 35.0%
! TCAAGTAAAGTTTGGTTCCA+TGG - Chr1:27802076-27802095 None:intergenic 35.0%
! TGTTGGTTGGGAAATTGATT+TGG - Chr1:27808092-27808111 None:intergenic 35.0%
! TTTTCCACTTATATCCGGTA+AGG + Chr1:27800268-27800287 MsG0180001827.01.T01:intron 35.0%
! TTTTGTCAAATCTTGGGAAG+GGG + Chr1:27801881-27801900 MsG0180001827.01.T01:CDS 35.0%
!! AAACCTGTGAGTTTGTTGAA+GGG - Chr1:27801996-27802015 None:intergenic 35.0%
!! AACACAAGTTTGGCTTTGTT+TGG + Chr1:27799108-27799127 MsG0180001827.01.T01:CDS 35.0%
!! AGCATTGACTTGGTCAAAAT+TGG + Chr1:27807298-27807317 MsG0180001827.01.T01:intron 35.0%
!! AGCATTGACTTGGTCAAAAT+TGG - Chr1:27807317-27807298 None:intergenic 35.0%
!! ATCAAAAAGCATCTCAGCAT+AGG - Chr1:27800938-27800957 None:intergenic 35.0%
!! CCTTGAAACTTTTGATGGAT+CGG - Chr1:27799502-27799521 None:intergenic 35.0%
!! GGCTAGTTTATATTTCTCAG+GGG + Chr1:27803529-27803548 MsG0180001827.01.T01:intron 35.0%
!! TGATGGCCTCAATTTTAACA+AGG + Chr1:27801574-27801593 MsG0180001827.01.T01:CDS 35.0%
!! TGCTTTTTGATACTCTTGCT+CGG + Chr1:27800947-27800966 MsG0180001827.01.T01:CDS 35.0%
!! TGGGATTTTGGTAGCTAAAT+GGG - Chr1:27808055-27808074 None:intergenic 35.0%
!! TTGGGATTTTGGTAGCTAAA+TGG - Chr1:27808056-27808075 None:intergenic 35.0%
!!! AAGCTGAATGAGCCTTTTTT+CGG + Chr1:27801834-27801853 MsG0180001827.01.T01:CDS 35.0%
!!! CAATGTTTTAAAACTCGGAC+CGG - Chr1:27805475-27805494 None:intergenic 35.0%
!!! CAATTTTTTGCCGACATGTT+TGG - Chr1:27807007-27807026 None:intergenic 35.0%
!!! CCTAATTTTTTTTCCTGCAC+TGG - Chr1:27807091-27807110 None:intergenic 35.0%
!!! GGAAATTGATTTGGGTTTTG+AGG - Chr1:27808116-27808135 None:intergenic 35.0%
!!! GTCTTTTTAGAGTTAAAGGC+AGG + Chr1:27805830-27805849 MsG0180001827.01.T01:intron 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + Chr1:27806965-27806984 MsG0180001827.01.T01:intron 35.0%
AAAAATGAGGACCGAAAGTG+AGG - Chr1:27800627-27800646 None:intergenic 40.0%
AAAATGAGGACCGAAAGTGA+GGG - Chr1:27800626-27800645 None:intergenic 40.0%
AAACCCTTCAACAAACTCAC+AGG + Chr1:27801990-27802009 MsG0180001827.01.T01:CDS 40.0%
AAATACCCATGCCACATAAG+GGG - Chr1:27800364-27800383 None:intergenic 40.0%
AAATTGAGGCCATCATCGAA+AGG - Chr1:27801569-27801588 None:intergenic 40.0%
AAGAGACAGAAGAGAAAGAG+TGG + Chr1:27804559-27804578 MsG0180001827.01.T01:intron 40.0%
AAGTTTATCACGCCTAAGGA+CGG + Chr1:27803224-27803243 MsG0180001827.01.T01:intron 40.0%
AATGCCAAAGATTTCAGGAG+TGG + Chr1:27799851-27799870 MsG0180001827.01.T01:CDS 40.0%
AATGGCAATAGCCTTTACAC+TGG + Chr1:27801929-27801948 MsG0180001827.01.T01:CDS 40.0%
ACAAACCAAACGGTTAAGAG+TGG - Chr1:27804696-27804715 None:intergenic 40.0%
ACTCCTGAAATCTTTGGCAT+TGG - Chr1:27799852-27799871 None:intergenic 40.0%
AGAGTGAAACAACAACGAGT+GGG - Chr1:27800680-27800699 None:intergenic 40.0%
AGATGGAGAATCAGCAATAG+AGG - Chr1:27800717-27800736 None:intergenic 40.0%
AGGGGTAACAGGAATTCTAA+TGG + Chr1:27801899-27801918 MsG0180001827.01.T01:CDS 40.0%
AGTGGAGAGACAAATGAGTT+GGG + Chr1:27804577-27804596 MsG0180001827.01.T01:intron 40.0%
ATACTTCTCGGATAGCACTT+GGG - Chr1:27805709-27805728 None:intergenic 40.0%
ATCGCAACTTCCTGATACTT+AGG + Chr1:27807393-27807412 MsG0180001827.01.T01:intron 40.0%
ATCTCTCTTAGATCTGTGTG+TGG + Chr1:27804479-27804498 MsG0180001827.01.T01:intron 40.0%
ATTAGAACTTGTCCGTCCTT+AGG - Chr1:27803239-27803258 None:intergenic 40.0%
ATTCCTCCTGAACCTAGTAT+TGG - Chr1:27801955-27801974 None:intergenic 40.0%
ATTGGAACTTGTCCGTCTTT+AGG - Chr1:27803451-27803470 None:intergenic 40.0%
CACGCCATTACAATCTCAAA+CGG + Chr1:27798895-27798914 MsG0180001827.01.T01:CDS 40.0%
CAGATCTAGTGAAGCACATA+AGG + Chr1:27808324-27808343 MsG0180001827.01.T01:CDS 40.0%
CATGTCAATATTCTGTGTGG+AGG + Chr1:27804632-27804651 MsG0180001827.01.T01:intron 40.0%
CATTTATCACCCCGAAATCT+AGG - Chr1:27799779-27799798 None:intergenic 40.0%
CCAAAGTAAGGGTTAACTGA+AGG - Chr1:27802129-27802148 None:intergenic 40.0%
CCGATCCATCAAAAGTTTCA+AGG + Chr1:27799499-27799518 MsG0180001827.01.T01:CDS 40.0%
CCTTCAATTTGTGGGTTTGA+GGG + Chr1:27800768-27800787 MsG0180001827.01.T01:intron 40.0%
CCTTCAGTTAACCCTTACTT+TGG + Chr1:27802126-27802145 MsG0180001827.01.T01:intron 40.0%
CGAGTTTATCACGCTAAAGA+CGG + Chr1:27803859-27803878 MsG0180001827.01.T01:intron 40.0%
CGCAACTTACTGATACTTAG+GGG - Chr1:27806499-27806518 None:intergenic 40.0%
CTAGATTTCGGGGTGATAAA+TGG + Chr1:27799777-27799796 MsG0180001827.01.T01:CDS 40.0%
CTCCAATGCATAAATGGTGA+TGG - Chr1:27802250-27802269 None:intergenic 40.0%
CTGAGGGTCAAAATGCAAAA+GGG + Chr1:27807322-27807341 MsG0180001827.01.T01:intron 40.0%
GAAGTTGGATGTAGGTTGTA+TGG + Chr1:27799900-27799919 MsG0180001827.01.T01:CDS 40.0%
GAGAGAAACCATCAAGTTAC+TGG + Chr1:27801856-27801875 MsG0180001827.01.T01:CDS 40.0%
GAGATCTAAGAGAGAGAAGA+GGG - Chr1:27800417-27800436 None:intergenic 40.0%
GAGGTGATGAGAATACCAAA+AGG - Chr1:27802024-27802043 None:intergenic 40.0%
GAGTTTATCACGCCTAAAGA+CGG + Chr1:27803436-27803455 MsG0180001827.01.T01:intron 40.0%
GATAGATGTGTTGAAAGGTG+AGG + Chr1:27799878-27799897 MsG0180001827.01.T01:CDS 40.0%
GATCTCACCTTCAACAAAGA+TGG - Chr1:27800734-27800753 None:intergenic 40.0%
GATGGTTTCTCTCCGAAAAA+AGG - Chr1:27801849-27801868 None:intergenic 40.0%
GCAACTTACTGATACTTAGG+GGG - Chr1:27806498-27806517 None:intergenic 40.0%
GCGTGCATGATATTAAATCC+TGG - Chr1:27799582-27799601 None:intergenic 40.0%
GCTAAACCAATTCCGTTAGA+AGG - Chr1:27799087-27799106 None:intergenic 40.0%
GGAGAGTCAAAAGCAAAAGA+TGG - Chr1:27804128-27804147 None:intergenic 40.0%
GGATAGCACTTGGGTTATAT+TGG - Chr1:27805700-27805719 None:intergenic 40.0%
GGATTATAGCAGCTTTCACA+AGG + Chr1:27801687-27801706 MsG0180001827.01.T01:intron 40.0%
GGGTTTGAGGGTTGTAATTT+AGG + Chr1:27800780-27800799 MsG0180001827.01.T01:intron 40.0%
GGTTCCATGGATAATCAACA+GGG - Chr1:27802063-27802082 None:intergenic 40.0%
GTCACTTGTGATATTGTGGT+TGG + Chr1:27805546-27805565 MsG0180001827.01.T01:intron 40.0%
GTGTTTACGGATATTCAGCT+TGG + Chr1:27799432-27799451 MsG0180001827.01.T01:CDS 40.0%
GTTGAAGGGTTTAGGTAGTT+TGG - Chr1:27801982-27802001 None:intergenic 40.0%
TAGTATACCACTCCCATAAC+CGG + Chr1:27800508-27800527 MsG0180001827.01.T01:intron 40.0%
TATACTTCTCGGATAGCACT+TGG - Chr1:27805710-27805729 None:intergenic 40.0%
TATCACCACTCTTAACCGTT+TGG + Chr1:27804688-27804707 MsG0180001827.01.T01:intron 40.0%
TATTCTGTGTGGAGGTTGAA+AGG + Chr1:27804640-27804659 MsG0180001827.01.T01:intron 40.0%
TCAGTGCGAAACCTAGATTT+CGG + Chr1:27799765-27799784 MsG0180001827.01.T01:CDS 40.0%
TCCCATCACCATTTATGCAT+TGG + Chr1:27802245-27802264 MsG0180001827.01.T01:CDS 40.0%
TCCCTCAGATTGCTCAAAAT+CGG - Chr1:27808192-27808211 None:intergenic 40.0%
TCCTTCAATTTGTGGGTTTG+AGG + Chr1:27800767-27800786 MsG0180001827.01.T01:intron 40.0%
TCTAAGAGAGATGCAAGAGA+TGG - Chr1:27804471-27804490 None:intergenic 40.0%
TCTACCTTACCGGATATAAG+TGG - Chr1:27800275-27800294 None:intergenic 40.0%
TGAGCCTAGTATCAAAGCTT+TGG - Chr1:27801041-27801060 None:intergenic 40.0%
TGAGGGTCAAAATGCAAAAG+GGG + Chr1:27807323-27807342 MsG0180001827.01.T01:intron 40.0%
TGCTCAATGGAGAGAACATT+CGG - Chr1:27799657-27799676 None:intergenic 40.0%
TGGTTCCATGGATAATCAAC+AGG - Chr1:27802064-27802083 None:intergenic 40.0%
TGGTTTAGCCAACACAAGTT+TGG + Chr1:27799098-27799117 MsG0180001827.01.T01:CDS 40.0%
TTCACCACTCCTGAAATCTT+TGG - Chr1:27799858-27799877 None:intergenic 40.0%
TTGTATGGAGAGGGTTGTTA+TGG + Chr1:27799915-27799934 MsG0180001827.01.T01:CDS 40.0%
TTTCTTATCTCTCTCCCACA+AGG - Chr1:27805526-27805545 None:intergenic 40.0%
! AAACTCGCCGATTGTAAAAC+AGG - Chr1:27803422-27803441 None:intergenic 40.0%
! AGGTTTGTTTATGCGGCAAT+TGG + Chr1:27799822-27799841 MsG0180001827.01.T01:CDS 40.0%
! AGTGCTATCCGAGAAGTATA+AGG + Chr1:27805710-27805729 MsG0180001827.01.T01:intron 40.0%
! ATCGGCCGTCAAGATTTTAA+CGG + Chr1:27799207-27799226 MsG0180001827.01.T01:CDS 40.0%
! CAGACCAAAGCTTTGATACT+AGG + Chr1:27801034-27801053 MsG0180001827.01.T01:CDS 40.0%
! CCGATCCTTGAAACTTTTGA+TGG - Chr1:27799507-27799526 None:intergenic 40.0%
! CTGATTCGTTCTTTGCATAG+AGG + Chr1:27804394-27804413 MsG0180001827.01.T01:intron 40.0%
! CTTATCCCAAACGTGTTTTC+TGG + Chr1:27798988-27799007 MsG0180001827.01.T01:CDS 40.0%
! GCTTTTGTTCCTTTCGATGA+TGG + Chr1:27801557-27801576 MsG0180001827.01.T01:CDS 40.0%
! GGTTTGTTTATGCGGCAATT+GGG + Chr1:27799823-27799842 MsG0180001827.01.T01:CDS 40.0%
! GTATCAGGAAGTTGCGATTT+TGG - Chr1:27807391-27807410 None:intergenic 40.0%
! GTGCTATCCGAGAAGTATAA+GGG + Chr1:27805711-27805730 MsG0180001827.01.T01:intron 40.0%
! TATCCGAGAAGTATAAGGGT+CGG + Chr1:27805715-27805734 MsG0180001827.01.T01:intron 40.0%
! TATGCCCTGTTGATTATCCA+TGG + Chr1:27802056-27802075 MsG0180001827.01.T01:CDS 40.0%
! TCACAGGTTTCAATGCCTTT+TGG + Chr1:27802006-27802025 MsG0180001827.01.T01:CDS 40.0%
! TCTAGGTTTCGCACTGATAA+TGG - Chr1:27799762-27799781 None:intergenic 40.0%
! TGAAAGGTGTATGCCACATA+AGG + Chr1:27804656-27804675 MsG0180001827.01.T01:intron 40.0%
! TGAAGGTCCTAACCGTTTTA+TGG - Chr1:27802112-27802131 None:intergenic 40.0%
!! ACCGATTTTGAGCAATCTGA+GGG + Chr1:27808188-27808207 MsG0180001827.01.T01:CDS 40.0%
!! ATAGCTCTGGCAATAGCAAT+TGG + Chr1:27801738-27801757 MsG0180001827.01.T01:CDS 40.0%
!! GAAACCTGTGAGTTTGTTGA+AGG - Chr1:27801997-27802016 None:intergenic 40.0%
!! GTGAGTTTGTTGAAGGGTTT+AGG - Chr1:27801990-27802009 None:intergenic 40.0%
!! GTTTTGGTCTCCTAAGTATC+AGG - Chr1:27807406-27807425 None:intergenic 40.0%
!!! AGAGTCAAGGTTTTTGGTGA+TGG + Chr1:27800025-27800044 MsG0180001827.01.T01:CDS 40.0%
!!! CGGTCCGAGTTTTAAAACAT+TGG + Chr1:27805473-27805492 MsG0180001827.01.T01:intron 40.0%
!!! GATTTGGGTTTTGAGGATGT+TGG - Chr1:27808109-27808128 None:intergenic 40.0%
!!! TTGGCTAGTTTTTCTTTCCC+AGG + Chr1:27803103-27803122 MsG0180001827.01.T01:intron 40.0%
AAAAGAAAGGCGACCAACCT+AGG - Chr1:27806025-27806044 None:intergenic 45.0%
AAAGAAAGGCGACCAACCTA+GGG - Chr1:27806024-27806043 None:intergenic 45.0%
AAATCTTGGGAAGGGGTAAC+AGG + Chr1:27801888-27801907 MsG0180001827.01.T01:CDS 45.0%
AAGGTGAGGAAGTTGGATGT+AGG + Chr1:27799892-27799911 MsG0180001827.01.T01:CDS 45.0%
AATCTTGACGGCCGATTGTT+TGG - Chr1:27799203-27799222 None:intergenic 45.0%
ACCAACCACAATGTCACAAG+TGG - Chr1:27805654-27805673 None:intergenic 45.0%
ACTGTGTGTGCATGGCAAAA+GGG + Chr1:27801441-27801460 MsG0180001827.01.T01:intron 45.0%
ACTGTTTAAGGGAGAGAGAG+TGG - Chr1:27800540-27800559 None:intergenic 45.0%
AGAGTGAGAGGGAGAAGAAA+GGG - Chr1:27800439-27800458 None:intergenic 45.0%
AGATCCAGTTTAGGGAGTTC+TGG + Chr1:27801001-27801020 MsG0180001827.01.T01:CDS 45.0%
AGGATGAGCAGTCATACTCA+TGG - Chr1:27799241-27799260 None:intergenic 45.0%
AGGGTTGACAAAGATGCAGA+TGG + Chr1:27801160-27801179 MsG0180001827.01.T01:intron 45.0%
AGTGCGAAACCTAGATTTCG+GGG + Chr1:27799767-27799786 MsG0180001827.01.T01:CDS 45.0%
ATACACCCCTTATGTGGCAT+GGG + Chr1:27800356-27800375 MsG0180001827.01.T01:intron 45.0%
ATACTCTTGCTCGGCAGATA+GGG + Chr1:27800956-27800975 MsG0180001827.01.T01:CDS 45.0%
ATGAAATGGTTCGATGTGCC+AGG + Chr1:27799561-27799580 MsG0180001827.01.T01:CDS 45.0%
ATGAGAAGAAGGGAGAGTCA+AGG + Chr1:27800012-27800031 MsG0180001827.01.T01:CDS 45.0%
ATGGAAGAGTGGTATGGAGA+AGG - Chr1:27800338-27800357 None:intergenic 45.0%
CAAAAGGGGCAACACTTAAG+GGG + Chr1:27807337-27807356 MsG0180001827.01.T01:intron 45.0%
CAGTGCGAAACCTAGATTTC+GGG + Chr1:27799766-27799785 MsG0180001827.01.T01:CDS 45.0%
CCACCAGAAATCATGTCAAG+AGG - Chr1:27799465-27799484 None:intergenic 45.0%
CCCTCAAACCCACAAATTGA+AGG - Chr1:27800771-27800790 None:intergenic 45.0%
CCTGAGGGTCAAAATGCAAA+AGG + Chr1:27807321-27807340 MsG0180001827.01.T01:intron 45.0%
CCTTTACACTGGCCAATACT+AGG + Chr1:27801940-27801959 MsG0180001827.01.T01:CDS 45.0%
CTGGCAATAGCAATTGGTGT+TGG + Chr1:27801744-27801763 MsG0180001827.01.T01:CDS 45.0%
CTGTTTAAGGGAGAGAGAGT+GGG - Chr1:27800539-27800558 None:intergenic 45.0%
GAAAGAAGAGGGAGAAGAGA+TGG + Chr1:27804529-27804548 MsG0180001827.01.T01:intron 45.0%
GAAAGCCACTTGTGACATTG+TGG + Chr1:27805646-27805665 MsG0180001827.01.T01:intron 45.0%
GACCAAAACTGCAAAAAGGG+CGG - Chr1:27806568-27806587 None:intergenic 45.0%
GAGAGTGAAACAACAACGAG+TGG - Chr1:27800681-27800700 None:intergenic 45.0%
GAGTGACATCACCAAGTTGT+TGG + Chr1:27800136-27800155 MsG0180001827.01.T01:intron 45.0%
GAGTGGAGAGACAAATGAGT+TGG + Chr1:27804576-27804595 MsG0180001827.01.T01:intron 45.0%
GAGTTTGTCACGTCTAAGGA+CGG + Chr1:27803648-27803667 MsG0180001827.01.T01:intron 45.0%
GATCCAGTTTAGGGAGTTCT+GGG + Chr1:27801002-27801021 MsG0180001827.01.T01:CDS 45.0%
GATCCGACCCTTATACTTCT+CGG - Chr1:27805721-27805740 None:intergenic 45.0%
GATGGTGAAGAAGAGGATGA+TGG + Chr1:27799966-27799985 MsG0180001827.01.T01:CDS 45.0%
GCAAAAGATGGAAGCAAGCA+AGG - Chr1:27804116-27804135 None:intergenic 45.0%
GCAAAAGGGGCAACACTTAA+GGG + Chr1:27807336-27807355 MsG0180001827.01.T01:intron 45.0%
GGAGATCTAAGAGAGAGAAG+AGG - Chr1:27800418-27800437 None:intergenic 45.0%
GGATGTAGGTTGTATGGAGA+GGG + Chr1:27799906-27799925 MsG0180001827.01.T01:CDS 45.0%
GGGCATACACAATGATGAAG+AGG - Chr1:27802043-27802062 None:intergenic 45.0%
GGTTATGGGAGTGGTATACT+AGG - Chr1:27800509-27800528 None:intergenic 45.0%
GTGACGAGTCGAAGATGAAA+TGG + Chr1:27799547-27799566 MsG0180001827.01.T01:CDS 45.0%
GTGTTGAAAGGTGAGGAAGT+TGG + Chr1:27799885-27799904 MsG0180001827.01.T01:CDS 45.0%
TAGGGACTAATATCCAGTGC+AGG + Chr1:27807075-27807094 MsG0180001827.01.T01:intron 45.0%
TATGGAGAGGGTTGTTATGG+TGG + Chr1:27799918-27799937 MsG0180001827.01.T01:CDS 45.0%
TCTCTCCATCGTATGCTCAA+TGG - Chr1:27799670-27799689 None:intergenic 45.0%
TCTCTCCATTGAGCATACGA+TGG + Chr1:27799662-27799681 MsG0180001827.01.T01:CDS 45.0%
TCTCTTAGATCTGTGTGTGG+AGG + Chr1:27804482-27804501 MsG0180001827.01.T01:intron 45.0%
TCTTCCATACACCCCTTATG+TGG + Chr1:27800350-27800369 MsG0180001827.01.T01:intron 45.0%
TGACCAAGTCAATGCTGATG+TGG + Chr1:27806600-27806619 MsG0180001827.01.T01:intron 45.0%
TGCAAAAAGGGCGGTACTTA+GGG - Chr1:27806559-27806578 None:intergenic 45.0%
TGCAAAAGGGGCAACACTTA+AGG + Chr1:27807335-27807354 MsG0180001827.01.T01:intron 45.0%
TGGAAGAGTGGTATGGAGAA+GGG - Chr1:27800337-27800356 None:intergenic 45.0%
TGGATGTAGGTTGTATGGAG+AGG + Chr1:27799905-27799924 MsG0180001827.01.T01:CDS 45.0%
TTGAAGGTGGCTGTTTATCC+TGG + Chr1:27802454-27802473 MsG0180001827.01.T01:intron 45.0%
TTGCTTGCATGAAGAATGCG+AGG - Chr1:27801804-27801823 None:intergenic 45.0%
TTTGAGCAATCTGAGGGAAG+TGG + Chr1:27808194-27808213 MsG0180001827.01.T01:CDS 45.0%
TTTGCCGAAACACCATCACT+TGG + Chr1:27801510-27801529 MsG0180001827.01.T01:intron 45.0%
! ACGCACATGATTTGCAAAGG+TGG - Chr1:27808258-27808277 None:intergenic 45.0%
! ACTTGGTCAAAATTGGCCTG+AGG + Chr1:27807305-27807324 MsG0180001827.01.T01:intron 45.0%
! AGCACGCACATGATTTGCAA+AGG - Chr1:27808261-27808280 None:intergenic 45.0%
! ATAAGGGGTGTATGGAAGAG+TGG - Chr1:27800349-27800368 None:intergenic 45.0%
! CCTCTTGACATGATTTCTGG+TGG + Chr1:27799462-27799481 MsG0180001827.01.T01:CDS 45.0%
! CGCACATGATTTGCAAAGGT+GGG - Chr1:27808257-27808276 None:intergenic 45.0%
! CTTGGTCAAAATTGGCCTGA+GGG + Chr1:27807306-27807325 MsG0180001827.01.T01:intron 45.0%
! GAAGGGAGAGTCAAGGTTTT+TGG + Chr1:27800019-27800038 MsG0180001827.01.T01:CDS 45.0%
! GGTCTTGTCATGGAGAAAAC+CGG - Chr1:27799372-27799391 None:intergenic 45.0%
! TACCGCCCTTTTTGCAGTTT+TGG + Chr1:27806563-27806582 MsG0180001827.01.T01:intron 45.0%
! TGAGCCAAGTGATGGTGTTT+CGG - Chr1:27801517-27801536 None:intergenic 45.0%
! TTTGATGGATCGGAACCTAC+TGG - Chr1:27799492-27799511 None:intergenic 45.0%
! TTTTTGTGTGTGGGACCAAG+TGG + Chr1:27804606-27804625 MsG0180001827.01.T01:intron 45.0%
!! ACCAAGTTGTTGGTGTCGTA+GGG + Chr1:27800146-27800165 MsG0180001827.01.T01:intron 45.0%
!! AGGAACAAAAGCACCTAGCT+TGG - Chr1:27801549-27801568 None:intergenic 45.0%
!! ATTTCTGGTGGTTCTCCAGT+AGG + Chr1:27799474-27799493 MsG0180001827.01.T01:CDS 45.0%
!! CCTAGTATTGGCCAGTGTAA+AGG - Chr1:27801943-27801962 None:intergenic 45.0%
!! CCTTTTGCATTTTGACCCTC+AGG - Chr1:27807324-27807343 None:intergenic 45.0%
!! CTGTGGATTGGTGTCATGTT+AGG + Chr1:27801358-27801377 MsG0180001827.01.T01:intron 45.0%
!! GACCGATTTTGAGCAATCTG+AGG + Chr1:27808187-27808206 MsG0180001827.01.T01:CDS 45.0%
!!! GGGCTGAGTTTTTTGTGTGT+GGG + Chr1:27804597-27804616 MsG0180001827.01.T01:intron 45.0%
!!! GGGTTTTGAGGATGTTGGTT+GGG - Chr1:27808104-27808123 None:intergenic 45.0%
!!! TGGGCTGAGTTTTTTGTGTG+TGG + Chr1:27804596-27804615 MsG0180001827.01.T01:intron 45.0%
!!! TGGGTTTTGAGGATGTTGGT+TGG - Chr1:27808105-27808124 None:intergenic 45.0%
!! AAGTATTTATAATTTATAAT+TGG - Chr1:27807439-27807458 None:intergenic 5.0%
!!! GTATTTTTATATATTTATAA+AGG + Chr1:27806455-27806474 MsG0180001827.01.T01:intron 5.0%
AACGTAACGGCTACAGAGTG+TGG - Chr1:27798926-27798945 None:intergenic 50.0%
ACCAACCTAGGGTTCACCTA+GGG - Chr1:27806013-27806032 None:intergenic 50.0%
AGACCGGGTCAATAGTCATG+TGG + Chr1:27805392-27805411 MsG0180001827.01.T01:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - Chr1:27804154-27804173 None:intergenic 50.0%
AGATGGAAGCAAGCAAGGAG+AGG - Chr1:27804111-27804130 None:intergenic 50.0%
AGGGAGTGAGAGTGATCTGA+CGG - Chr1:27800607-27800626 None:intergenic 50.0%
AGTCCCAGAACTCCCTAAAC+TGG - Chr1:27801008-27801027 None:intergenic 50.0%
AGTGGTATACTAGGATGCGG+CGG - Chr1:27800500-27800519 None:intergenic 50.0%
ATGGAAGCAAGCAAGGAGAG+GGG - Chr1:27804109-27804128 None:intergenic 50.0%
ATGGTGGCATAGGACCGTAA+CGG - Chr1:27799299-27799318 None:intergenic 50.0%
CAAAAAGGGCGGTACTTAGG+GGG - Chr1:27806557-27806576 None:intergenic 50.0%
CACTCTCACTCCCTCACTTT+CGG + Chr1:27800613-27800632 MsG0180001827.01.T01:intron 50.0%
CACTGGCCAATACTAGGTTC+AGG + Chr1:27801946-27801965 MsG0180001827.01.T01:CDS 50.0%
CACTGTGTGTGCATGGCAAA+AGG + Chr1:27801440-27801459 MsG0180001827.01.T01:intron 50.0%
CAGAGTGAGAGGGAGAAGAA+AGG - Chr1:27800440-27800459 None:intergenic 50.0%
CATACACCCCTTATGTGGCA+TGG + Chr1:27800355-27800374 MsG0180001827.01.T01:intron 50.0%
CCATCACTTGGCTCAGGAAT+AGG + Chr1:27801522-27801541 MsG0180001827.01.T01:intron 50.0%
CCTAAAATTGACGGCGACAC+TGG + Chr1:27799258-27799277 MsG0180001827.01.T01:CDS 50.0%
CCTATTCCTGAGCCAAGTGA+TGG - Chr1:27801525-27801544 None:intergenic 50.0%
CGCAACAACCACCATCATTC+CGG + Chr1:27804267-27804286 MsG0180001827.01.T01:intron 50.0%
CGCGTGATAATAGAGAGTGG+TGG - Chr1:27807672-27807691 None:intergenic 50.0%
CGGCAAGTTTATCACGCCTA+AGG + Chr1:27803220-27803239 MsG0180001827.01.T01:intron 50.0%
CTATGGTACGGTCCAGGAAA+AGG - Chr1:27805877-27805896 None:intergenic 50.0%
CTCAGGAATAGGACCAAGCT+AGG + Chr1:27801533-27801552 MsG0180001827.01.T01:intron 50.0%
CTGCAAAAAGGGCGGTACTT+AGG - Chr1:27806560-27806579 None:intergenic 50.0%
CTGTGTGTGCATGGCAAAAG+GGG + Chr1:27801442-27801461 MsG0180001827.01.T01:intron 50.0%
CTTAGATCTGTGTGTGGAGG+TGG + Chr1:27804485-27804504 MsG0180001827.01.T01:intron 50.0%
CTTATAGCTTCTGCTGCACG+TGG + Chr1:27799021-27799040 MsG0180001827.01.T01:CDS 50.0%
GAAACACCATCACTTGGCTC+AGG + Chr1:27801516-27801535 MsG0180001827.01.T01:intron 50.0%
GACTCGTCACTAGCATAACG+AGG - Chr1:27799537-27799556 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - Chr1:27804155-27804174 None:intergenic 50.0%
GATACTCTTGCTCGGCAGAT+AGG + Chr1:27800955-27800974 MsG0180001827.01.T01:CDS 50.0%
GATGGAAGCAAGCAAGGAGA+GGG - Chr1:27804110-27804129 None:intergenic 50.0%
GCAAAAAGGGCGGTACTTAG+GGG - Chr1:27806558-27806577 None:intergenic 50.0%
GCCACTTGTGACATTGTGGT+TGG + Chr1:27805650-27805669 MsG0180001827.01.T01:intron 50.0%
GGACCACATGACTATTGACC+CGG - Chr1:27805398-27805417 None:intergenic 50.0%
GGGAGTGGTATACTAGGATG+CGG - Chr1:27800503-27800522 None:intergenic 50.0%
GGGTGTATGGAAGAGTGGTA+TGG - Chr1:27800344-27800363 None:intergenic 50.0%
GTGAAACAACAACGAGTGGG+AGG - Chr1:27800677-27800696 None:intergenic 50.0%
TAGCCAGGGTGGCAGAAATT+GGG - Chr1:27805936-27805955 None:intergenic 50.0%
TCCAGATATGACACGTGCTG+CGG - Chr1:27799055-27799074 None:intergenic 50.0%
TCCCTACGACACCAACAACT+TGG - Chr1:27800150-27800169 None:intergenic 50.0%
TCCGCCACAATCTCAAACTC+CGG - Chr1:27800062-27800081 None:intergenic 50.0%
TGACCAAGTCAATGCTGACG+TGG - Chr1:27807294-27807313 None:intergenic 50.0%
TGATCGAACCAGTGGGTCAT+TGG - Chr1:27805423-27805442 None:intergenic 50.0%
TGCAAAGGTGGGTAACACCT+CGG - Chr1:27808246-27808265 None:intergenic 50.0%
TGCAGATGGAAGAATCACCG+AGG + Chr1:27801174-27801193 MsG0180001827.01.T01:CDS 50.0%
TGGAAGAATCACCGAGGAAG+AGG + Chr1:27801180-27801199 MsG0180001827.01.T01:CDS 50.0%
TGGCCAATACTAGGTTCAGG+AGG + Chr1:27801949-27801968 MsG0180001827.01.T01:CDS 50.0%
! ATTGGTCTATGGTACGGTCC+AGG - Chr1:27805883-27805902 None:intergenic 50.0%
! CATGCCACATAAGGGGTGTA+TGG - Chr1:27800357-27800376 None:intergenic 50.0%
! CCAGTGTCGCCGTCAATTTT+AGG - Chr1:27799261-27799280 None:intergenic 50.0%
! GTGATGGTGTTTCGGCAAAC+AGG - Chr1:27801509-27801528 None:intergenic 50.0%
!! AACACGTGGCTTGCTACGAT+TGG + Chr1:27807779-27807798 MsG0180001827.01.T01:intron 50.0%
!! CACCAAGTTGTTGGTGTCGT+AGG + Chr1:27800145-27800164 MsG0180001827.01.T01:intron 50.0%
!! CATCCACGTCAGCATTGACT+TGG + Chr1:27807288-27807307 MsG0180001827.01.T01:intron 50.0%
!! CGTCCACATCAGCATTGACT+TGG - Chr1:27806606-27806625 None:intergenic 50.0%
!! GGGGAGATTGGTCTATGGTA+CGG - Chr1:27805889-27805908 None:intergenic 50.0%
!! TTGGTGTCGTAGGGAAGACA+TGG + Chr1:27800155-27800174 MsG0180001827.01.T01:intron 50.0%
!!! AGGGTGCCGTATGGTTTTCA+TGG + Chr1:27800098-27800117 MsG0180001827.01.T01:CDS 50.0%
AAACCATACGGCACCCTCCT+TGG - Chr1:27800095-27800114 None:intergenic 55.0%
AAGGTGGGTAACACCTCGGT+CGG - Chr1:27808242-27808261 None:intergenic 55.0%
ACCGCAGCACGTGTCATATC+TGG + Chr1:27799051-27799070 MsG0180001827.01.T01:CDS 55.0%
ACGCGATCAATGCGTGGGAT+GGG + Chr1:27799598-27799617 MsG0180001827.01.T01:CDS 55.0%
ACGTGAAGTCGCCGGAATGA+TGG - Chr1:27804281-27804300 None:intergenic 55.0%
ACTGTGAGAGTGGGAGGAGA+AGG - Chr1:27800578-27800597 None:intergenic 55.0%
AGAGAGAGAGAGAGAGGGAG+AGG - Chr1:27804150-27804169 None:intergenic 55.0%
AGAGTGGGAACGACCGGTTA+TGG - Chr1:27800524-27800543 None:intergenic 55.0%
AGCCAGGGTGGCAGAAATTG+GGG - Chr1:27805935-27805954 None:intergenic 55.0%
AGTGACCCAGTGCCTTAACC+GGG + Chr1:27805442-27805461 MsG0180001827.01.T01:intron 55.0%
CAGTGACCCAGTGCCTTAAC+CGG + Chr1:27805441-27805460 MsG0180001827.01.T01:intron 55.0%
CATGCACGCGATCAATGCGT+GGG + Chr1:27799593-27799612 MsG0180001827.01.T01:CDS 55.0%
CCCTCTTCTTTCACCACCGT+CGG - Chr1:27804521-27804540 None:intergenic 55.0%
CCGACGGTGGTGAAAGAAGA+GGG + Chr1:27804518-27804537 MsG0180001827.01.T01:intron 55.0%
CGAACCAGTGGGTCATTGGT+CGG - Chr1:27805419-27805438 None:intergenic 55.0%
CGGCAGATAGGGATTCAAGG+AGG + Chr1:27800967-27800986 MsG0180001827.01.T01:CDS 55.0%
CGGCGAGTTTGTCACGTCTA+AGG + Chr1:27803644-27803663 MsG0180001827.01.T01:intron 55.0%
CTAGCCAGGGTGGCAGAAAT+TGG - Chr1:27805937-27805956 None:intergenic 55.0%
CTGTGTGTGGAGGTGGCAAA+GGG + Chr1:27804492-27804511 MsG0180001827.01.T01:intron 55.0%
GACCAACCTAGGGTTCACCT+AGG - Chr1:27806014-27806033 None:intergenic 55.0%
GAGAGAGAGAGAGAGGGAGA+GGG - Chr1:27804149-27804168 None:intergenic 55.0%
GAGGGAGGATGGTGAAGAAG+AGG + Chr1:27799959-27799978 MsG0180001827.01.T01:CDS 55.0%
GAGTGGGAACGACCGGTTAT+GGG - Chr1:27800523-27800542 None:intergenic 55.0%
GCTCGGCAGATAGGGATTCA+AGG + Chr1:27800964-27800983 MsG0180001827.01.T01:CDS 55.0%
GGAGGTGAAGTTGCCAAGGA+GGG + Chr1:27800079-27800098 MsG0180001827.01.T01:CDS 55.0%
GGGCGCGTGATAATAGAGAG+TGG - Chr1:27807675-27807694 None:intergenic 55.0%
GGGTCACTGATCGAACCAGT+GGG - Chr1:27805430-27805449 None:intergenic 55.0%
GGTGGTTGTTGCGTTGCAGA+GGG - Chr1:27804260-27804279 None:intergenic 55.0%
GTGGGATGGGGAAGATGATG+AGG + Chr1:27799611-27799630 MsG0180001827.01.T01:CDS 55.0%
TATGACACGTGCTGCGGTGA+CGG - Chr1:27799049-27799068 None:intergenic 55.0%
TCATGCACGCGATCAATGCG+TGG + Chr1:27799592-27799611 MsG0180001827.01.T01:CDS 55.0%
TCCTCCCTCGCCACGAAAAA+CGG - Chr1:27799948-27799967 None:intergenic 55.0%
TCTGTGTGTGGAGGTGGCAA+AGG + Chr1:27804491-27804510 MsG0180001827.01.T01:intron 55.0%
TGAAGTCGCCGGAATGATGG+TGG - Chr1:27804278-27804297 None:intergenic 55.0%
TGGGTCACTGATCGAACCAG+TGG - Chr1:27805431-27805450 None:intergenic 55.0%
TGGTGGTTGTTGCGTTGCAG+AGG - Chr1:27804261-27804280 None:intergenic 55.0%
TTTCTGAGCCGTGCGTTGCA+CGG - Chr1:27804736-27804755 None:intergenic 55.0%
! ATCGACCCGGTTAAGGCACT+GGG - Chr1:27805450-27805469 None:intergenic 55.0%
! GCCGGAGTTTGAGATTGTGG+CGG + Chr1:27800058-27800077 MsG0180001827.01.T01:CDS 55.0%
! GGAGTTTGAGATTGTGGCGG+AGG + Chr1:27800061-27800080 MsG0180001827.01.T01:CDS 55.0%
! GTCGCCGGAGTTTGAGATTG+TGG + Chr1:27800055-27800074 MsG0180001827.01.T01:CDS 55.0%
! GTTGTTGAGAGTGGCGCTGA+CGG - Chr1:27804312-27804331 None:intergenic 55.0%
! TTTTTCGTGGCGAGGGAGGA+TGG + Chr1:27799948-27799967 MsG0180001827.01.T01:CDS 55.0%
!! GGACAGGGGAGATTGGTCTA+TGG - Chr1:27805894-27805913 None:intergenic 55.0%
!! TACAACACGGGCTAGCGCTT+GGG - Chr1:27805597-27805616 None:intergenic 55.0%
!!! TGAGCCGTTTTTCGTGGCGA+GGG + Chr1:27799941-27799960 MsG0180001827.01.T01:CDS 55.0%
!!! TGGTGGTGAGCCGTTTTTCG+TGG + Chr1:27799935-27799954 MsG0180001827.01.T01:CDS 55.0%
ACCGACAGGGAGACACGTAG+GGG - Chr1:27805970-27805989 None:intergenic 60.0%
ACCGGTGATCGACCCGGTTA+AGG - Chr1:27805457-27805476 None:intergenic 60.0%
ACCTCGGTCGGGTATGGTTG+CGG - Chr1:27808230-27808249 None:intergenic 60.0%
AGAGGCAGAGGCAGAGTGAG+AGG - Chr1:27800451-27800470 None:intergenic 60.0%
AGGGGCAACACTTAAGGGGC+TGG + Chr1:27807341-27807360 MsG0180001827.01.T01:intron 60.0%
AGGGGGTTGGAGGAGGAAGA+AGG - Chr1:27804048-27804067 None:intergenic 60.0%
AGGTGGGTAACACCTCGGTC+GGG - Chr1:27808241-27808260 None:intergenic 60.0%
CACCGACAGGGAGACACGTA+GGG - Chr1:27805971-27805990 None:intergenic 60.0%
CACGCGATCAATGCGTGGGA+TGG + Chr1:27799597-27799616 MsG0180001827.01.T01:CDS 60.0%
CCAGGGTGGCAGAAATTGGG+GGG - Chr1:27805933-27805952 None:intergenic 60.0%
CCTCCCACTCTCACAGTCGT+CGG + Chr1:27800581-27800600 MsG0180001827.01.T01:intron 60.0%
CGCGATCAATGCGTGGGATG+GGG + Chr1:27799599-27799618 MsG0180001827.01.T01:CDS 60.0%
CGGAGGTGAAGTTGCCAAGG+AGG + Chr1:27800078-27800097 MsG0180001827.01.T01:CDS 60.0%
CGTGTCTCCCTGTCGGTGAA+AGG + Chr1:27805973-27805992 MsG0180001827.01.T01:intron 60.0%
GAAGCAAGCAAGGAGAGGGG+CGG - Chr1:27804106-27804125 None:intergenic 60.0%
GAGACACGTAGGGGGGATTG+GGG - Chr1:27805961-27805980 None:intergenic 60.0%
GAGGCAGAGGCAGAGTGAGA+GGG - Chr1:27800450-27800469 None:intergenic 60.0%
GATCGACCCGGTTAAGGCAC+TGG - Chr1:27805451-27805470 None:intergenic 60.0%
GCCAGGGTGGCAGAAATTGG+GGG - Chr1:27805934-27805953 None:intergenic 60.0%
GCCCTAGGTGAACCCTAGGT+TGG + Chr1:27806009-27806028 MsG0180001827.01.T01:intron 60.0%
GCCGACGGTGGTGAAAGAAG+AGG + Chr1:27804517-27804536 MsG0180001827.01.T01:intron 60.0%
GCCTTAACCGGGTCGATCAC+CGG + Chr1:27805453-27805472 MsG0180001827.01.T01:intron 60.0%
GGAACGACCGGTTATGGGAG+TGG - Chr1:27800518-27800537 None:intergenic 60.0%
GGAGACACGTAGGGGGGATT+GGG - Chr1:27805962-27805981 None:intergenic 60.0%
GGAGAGAGAGTGGGAACGAC+CGG - Chr1:27800530-27800549 None:intergenic 60.0%
GGTAACACCTCGGTCGGGTA+TGG - Chr1:27808236-27808255 None:intergenic 60.0%
GGTATACTAGGATGCGGCGG+CGG - Chr1:27800497-27800516 None:intergenic 60.0%
GGTGGCAGAAATTGGGGGGT+GGG - Chr1:27805929-27805948 None:intergenic 60.0%
GGTTGCCCTAGGTGAACCCT+AGG + Chr1:27806005-27806024 MsG0180001827.01.T01:intron 60.0%
GGTTGTTGCGTTGCAGAGGG+TGG - Chr1:27804257-27804276 None:intergenic 60.0%
GTCGGAGCCTTTCACCGACA+GGG - Chr1:27805983-27806002 None:intergenic 60.0%
GTGGCAGAAATTGGGGGGTG+GGG - Chr1:27805928-27805947 None:intergenic 60.0%
GTTGCAGAGGGTGGTGTGTG+TGG - Chr1:27804248-27804267 None:intergenic 60.0%
TCACCGACAGGGAGACACGT+AGG - Chr1:27805972-27805991 None:intergenic 60.0%
TCGACAAGGCAAGAGGGTGG+CGG - Chr1:27804078-27804097 None:intergenic 60.0%
TGGCAGAAATTGGGGGGTGG+GGG - Chr1:27805927-27805946 None:intergenic 60.0%
TGGCGGAGGTGAAGTTGCCA+AGG + Chr1:27800075-27800094 MsG0180001827.01.T01:CDS 60.0%
TGGTCCGACCAATGACCCAC+TGG + Chr1:27805412-27805431 MsG0180001827.01.T01:intron 60.0%
TGTGTGGAGGTGGCAAAGGG+TGG + Chr1:27804495-27804514 MsG0180001827.01.T01:intron 60.0%
TTCACCTAGGGCAACCGCGT+CGG - Chr1:27806001-27806020 None:intergenic 60.0%
TTCTGAGCCGTGCGTTGCAC+GGG - Chr1:27804735-27804754 None:intergenic 60.0%
!! ATGGGGGCACTGTGTGTGCA+TGG + Chr1:27801433-27801452 MsG0180001827.01.T01:intron 60.0%
!! GGTGATGGATGCGAAGTCGC+CGG + Chr1:27800040-27800059 MsG0180001827.01.T01:CDS 60.0%
!! GTACAACACGGGCTAGCGCT+TGG - Chr1:27805598-27805617 None:intergenic 60.0%
!! TTGCCAAGGAGGGTGCCGTA+TGG + Chr1:27800089-27800108 MsG0180001827.01.T01:CDS 60.0%
!!! GTGAGCCGTTTTTCGTGGCG+AGG + Chr1:27799940-27799959 MsG0180001827.01.T01:CDS 60.0%
AAGGGCGGTACTTAGGGGGC+TGG - Chr1:27806553-27806572 None:intergenic 65.0%
ACCGCAACCATACCCGACCG+AGG + Chr1:27808226-27808245 MsG0180001827.01.T01:CDS 65.0%
ACGGCCGACGACTGTGAGAG+TGG - Chr1:27800588-27800607 None:intergenic 65.0%
ACTCGGACCGGTGATCGACC+CGG - Chr1:27805463-27805482 None:intergenic 65.0%
AGAAATTGGGGGGTGGGGGG+GGG - Chr1:27805923-27805942 None:intergenic 65.0%
AGGTGGCAAAGGGTGGCCGA+CGG + Chr1:27804502-27804521 MsG0180001827.01.T01:intron 65.0%
CACTCACCTGCCACCACCAC+TGG + Chr1:27800471-27800490 MsG0180001827.01.T01:intron 65.0%
CAGAAATTGGGGGGTGGGGG+GGG - Chr1:27805924-27805943 None:intergenic 65.0%
CCCCCCAATTTCTGCCACCC+TGG + Chr1:27805930-27805949 MsG0180001827.01.T01:intron 65.0%
CCCCCTACGTGTCTCCCTGT+CGG + Chr1:27805966-27805985 MsG0180001827.01.T01:intron 65.0%
CCGACAGGGAGACACGTAGG+GGG - Chr1:27805969-27805988 None:intergenic 65.0%
CCGACGACTGTGAGAGTGGG+AGG - Chr1:27800584-27800603 None:intergenic 65.0%
CGACAGGGAGACACGTAGGG+GGG - Chr1:27805968-27805987 None:intergenic 65.0%
CGGCCGACGACTGTGAGAGT+GGG - Chr1:27800587-27800606 None:intergenic 65.0%
CGTCGGAGCCTTTCACCGAC+AGG - Chr1:27805984-27806003 None:intergenic 65.0%
GCAGAAATTGGGGGGTGGGG+GGG - Chr1:27805925-27805944 None:intergenic 65.0%
GCAGAGGGTGGTGTGTGTGG+TGG - Chr1:27804245-27804264 None:intergenic 65.0%
GGATTGGGGTCTAGCCAGGG+TGG - Chr1:27805947-27805966 None:intergenic 65.0%
GGCAGAAATTGGGGGGTGGG+GGG - Chr1:27805926-27805945 None:intergenic 65.0%
GGCAGGTGAGTGAGAGGCAG+AGG - Chr1:27800463-27800482 None:intergenic 65.0%
GGGAGACACGTAGGGGGGAT+TGG - Chr1:27805963-27805982 None:intergenic 65.0%
GGGGGATTGGGGTCTAGCCA+GGG - Chr1:27805950-27805969 None:intergenic 65.0%
GGGTGGCAGAAATTGGGGGG+TGG - Chr1:27805930-27805949 None:intergenic 65.0%
GTCCTCACCCGTGCAACGCA+CGG + Chr1:27804725-27804744 MsG0180001827.01.T01:intron 65.0%
GTCGGTGAAAGGCTCCGACG+CGG + Chr1:27805984-27806003 MsG0180001827.01.T01:intron 65.0%
TGGCAAGAGGGGGTTGGAGG+AGG - Chr1:27804055-27804074 None:intergenic 65.0%
! AAGAGGGTGGCGGTGGCAAG+AGG - Chr1:27804068-27804087 None:intergenic 65.0%
! ACAAGGCAAGAGGGTGGCGG+TGG - Chr1:27804075-27804094 None:intergenic 65.0%
! AGAGGGTGGCGGTGGCAAGA+GGG - Chr1:27804067-27804086 None:intergenic 65.0%
! GCGTCGACAAGGCAAGAGGG+TGG - Chr1:27804081-27804100 None:intergenic 65.0%
! GGTGGTGGCAGGTGAGTGAG+AGG - Chr1:27800469-27800488 None:intergenic 65.0%
! TGGTGGCGACGTGAAGTCGC+CGG - Chr1:27804289-27804308 None:intergenic 65.0%
!! GCGGCGTCGACAAGGCAAGA+GGG - Chr1:27804084-27804103 None:intergenic 65.0%
!! GTTGAGAGTGGCGCTGACGG+TGG - Chr1:27804309-27804328 None:intergenic 65.0%
!!! GCCGTTTTTCGTGGCGAGGG+AGG + Chr1:27799944-27799963 MsG0180001827.01.T01:CDS 65.0%
AAATTGGGGGGTGGGGGGGG+GGG - Chr1:27805921-27805940 None:intergenic 70.0%
AGCCGTGCGTTGCACGGGTG+AGG - Chr1:27804730-27804749 None:intergenic 70.0%
CGGTGGCAAGAGGGGGTTGG+AGG - Chr1:27804058-27804077 None:intergenic 70.0%
GAAATTGGGGGGTGGGGGGG+GGG - Chr1:27805922-27805941 None:intergenic 70.0%
GCAAGCAAGGAGAGGGGCGG+CGG - Chr1:27804103-27804122 None:intergenic 70.0%
GGGGGAGGGACAGGGGAGAT+TGG - Chr1:27805901-27805920 None:intergenic 70.0%
GGGGGGATTGGGGTCTAGCC+AGG - Chr1:27805951-27805970 None:intergenic 70.0%
TGGCAAAGGGTGGCCGACGG+TGG + Chr1:27804505-27804524 MsG0180001827.01.T01:intron 70.0%
TGGCGGTGGCAAGAGGGGGT+TGG - Chr1:27804061-27804080 None:intergenic 70.0%
! AGGGTGGCGGTGGCAAGAGG+GGG - Chr1:27804065-27804084 None:intergenic 70.0%
! GAGGGTGGCGGTGGCAAGAG+GGG - Chr1:27804066-27804085 None:intergenic 70.0%
!! GAGAGTGGCGCTGACGGTGG+TGG - Chr1:27804306-27804325 None:intergenic 70.0%
!! GGCGGCGTCGACAAGGCAAG+AGG - Chr1:27804085-27804104 None:intergenic 70.0%
AATTGGGGGGTGGGGGGGGG+GGG - Chr1:27805920-27805939 None:intergenic 75.0%
GGCTCCGACGCGGTTGCCCT+AGG + Chr1:27805994-27806013 MsG0180001827.01.T01:intron 75.0%
TAGGATGCGGCGGCGGCCAG+TGG - Chr1:27800490-27800509 None:intergenic 75.0%
! ATTGGGGGGTGGGGGGGGGG+GGG - Chr1:27805919-27805938 None:intergenic 80.0%
! GATGCGGCGGCGGCCAGTGG+TGG - Chr1:27800487-27800506 None:intergenic 80.0%
!!! CGGCGGCCAGTGGTGGTGGC+AGG - Chr1:27800480-27800499 None:intergenic 80.0%
!!! GAGGGGCGGCGGCGTCGACA+AGG - Chr1:27804092-27804111 None:intergenic 80.0%
! GCGGCGGCGGCCAGTGGTGG+TGG - Chr1:27800484-27800503 None:intergenic 85.0%
! GGGGGGGGGGGGAGGGACAG+GGG - Chr1:27805908-27805927 None:intergenic 85.0%
! GGGGGGGGGGGGGAGGGACA+GGG - Chr1:27805909-27805928 None:intergenic 85.0%
! TGGGGGGGGGGGGGAGGGAC+AGG - Chr1:27805910-27805929 None:intergenic 85.0%
! GGGGGTGGGGGGGGGGGGGA+GGG - Chr1:27805915-27805934 None:intergenic 90.0%
! GGGGGGTGGGGGGGGGGGGG+AGG - Chr1:27805916-27805935 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr1 gene 27798889 27808373 27798889 ID=MsG0180001827.01;Name=MsG0180001827.01
Chr1 mRNA 27798889 27808373 27798889 ID=MsG0180001827.01.T01;Parent=MsG0180001827.01;Name=MsG0180001827.01.T01;_AED=0.50;_eAED=0.57;_QI=0|0.57|0.37|1|1|0.87|8|0|843
Chr1 exon 27798889 27800137 27798889 ID=MsG0180001827.01.T01:exon:1093;Parent=MsG0180001827.01.T01
Chr1 exon 27800914 27801076 27800914 ID=MsG0180001827.01.T01:exon:1094;Parent=MsG0180001827.01.T01
Chr1 exon 27801162 27801215 27801162 ID=MsG0180001827.01.T01:exon:1095;Parent=MsG0180001827.01.T01
Chr1 exon 27801538 27801595 27801538 ID=MsG0180001827.01.T01:exon:1096;Parent=MsG0180001827.01.T01
Chr1 exon 27801735 27802118 27801735 ID=MsG0180001827.01.T01:exon:1097;Parent=MsG0180001827.01.T01
Chr1 exon 27802225 27802320 27802225 ID=MsG0180001827.01.T01:exon:1098;Parent=MsG0180001827.01.T01
Chr1 exon 27802460 27802614 27802460 ID=MsG0180001827.01.T01:exon:1099;Parent=MsG0180001827.01.T01
Chr1 exon 27808001 27808373 27808001 ID=MsG0180001827.01.T01:exon:1100;Parent=MsG0180001827.01.T01
Chr1 CDS 27798889 27800137 27798889 ID=MsG0180001827.01.T01:cds;Parent=MsG0180001827.01.T01
Chr1 CDS 27800914 27801076 27800914 ID=MsG0180001827.01.T01:cds;Parent=MsG0180001827.01.T01
Chr1 CDS 27801162 27801215 27801162 ID=MsG0180001827.01.T01:cds;Parent=MsG0180001827.01.T01
Chr1 CDS 27801538 27801595 27801538 ID=MsG0180001827.01.T01:cds;Parent=MsG0180001827.01.T01
Chr1 CDS 27801735 27802118 27801735 ID=MsG0180001827.01.T01:cds;Parent=MsG0180001827.01.T01
Chr1 CDS 27802225 27802320 27802225 ID=MsG0180001827.01.T01:cds;Parent=MsG0180001827.01.T01
Chr1 CDS 27802460 27802614 27802460 ID=MsG0180001827.01.T01:cds;Parent=MsG0180001827.01.T01
Chr1 CDS 27808001 27808373 27808001 ID=MsG0180001827.01.T01:cds;Parent=MsG0180001827.01.T01
Gene Sequence

>MsG0180001827.01.T01

ATGCTTCACGCCATTACAATCTCAAACGGAAAAGCCACACTCTGTAGCCGTTACGTTCAAACTTACAAATACAAAATCGAAAACGAAGCTGGTTACCAACTTATCCCAAACGTGTTTTCTGGTTTCAACTCGCTTATAGCTTCTGCTGCACGTGGCTCCGTCACCGCAGCACGTGTCATATCTGGACAATACAATCCTTCTAACGGAATTGGTTTAGCCAACACAAGTTTGGCTTTGTTTGGTAACAAACTTTTTGCTTTAGGAGAATCAGACCTTCCTTATGAAATCAAGCTTACACCAAACGGTGATATCCAAACAATCGGCCGTCAAGATTTTAACGGCAAACTCTCCATGAGTATGACTGCTCATCCTAAAATTGACGGCGACACTGGTGAAACTTTTGCTTTCCGTTACGGTCCTATGCCACCATTTTTAACCTATTTCCGTTTTGATGCAAATGGTGTTAAACATAACGATGTTCCGGTTTTCTCCATGACAAGACCTTCTTTTCTTCATGATTTCGCCATTACTAAAAAGTATGCTGTGTTTACGGATATTCAGCTTGGTATGAATCCTCTTGACATGATTTCTGGTGGTTCTCCAGTAGGTTCCGATCCATCAAAAGTTTCAAGGATCGGAATTATACCTCGTTATGCTAGTGACGAGTCGAAGATGAAATGGTTCGATGTGCCAGGATTTAATATCATGCACGCGATCAATGCGTGGGATGGGGAAGATGATGAGGATACTGTGACACTAATTGCTCCGAATGTTCTCTCCATTGAGCATACGATGGAGAGACTTGAGCTTGTGCATGCAATGATTGAGAAAGTGAAGATTAATATCAAAACTGGGATTGTATCAAGACAACCATTATCAGTGCGAAACCTAGATTTCGGGGTGATAAATGGTGATTACATGGGGAAAAAGAATAGGTTTGTTTATGCGGCAATTGGGAATCCAATGCCAAAGATTTCAGGAGTGGTGAAGATAGATGTGTTGAAAGGTGAGGAAGTTGGATGTAGGTTGTATGGAGAGGGTTGTTATGGTGGTGAGCCGTTTTTCGTGGCGAGGGAGGATGGTGAAGAAGAGGATGATGGTTATTTGGTGAGTTATGTGCATGATGAGAAGAAGGGAGAGTCAAGGTTTTTGGTGATGGATGCGAAGTCGCCGGAGTTTGAGATTGTGGCGGAGGTGAAGTTGCCAAGGAGGGTGCCGTATGGTTTTCATGGATTATTTGTGAAGGAGAGATTGAATGAAGAGTCAAAGGCCTATGCTGAGATGCTTTTTGATACTCTTGCTCGGCAGATAGGGATTCAAGGAGGTTCGATTAACAAGATCCAGTTTAGGGAGTTCTGGGACTGTATTTCAGACCAAAGCTTTGATACTAGGCTCAAAATATTATTTGACATGGTTGACAAAGATGCAGATGGAAGAATCACCGAGGAAGAGGTAAAAGATGTATGGAATAGGACCAAGCTAGGTGCTTTTGTTCCTTTCGATGATGGCCTCAATTTTAACAAGATGATAGCTCTGGCAATAGCAATTGGTGTTGGTATACGTGCTATTTATCATCTTGCTTGTGATTTTCCTCGCATTCTTCATGCAAGCAATGAAAAGTACAAGCTGAATGAGCCTTTTTTCGGAGAGAAACCATCAAGTTACTGGCATTTTGTCAAATCTTGGGAAGGGGTAACAGGAATTCTAATGGTTGTGCTAATGGCAATAGCCTTTACACTGGCCAATACTAGGTTCAGGAGGAATCGCACCAAACTACCTAAACCCTTCAACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCACCTCTTCATCATTGTGTATGCCCTGTTGATTATCCATGGAACCAAACTTTACTTGACTAAGGAATGGAACCATAAAACGACTTGGATGTATCTGGCTATTCCCATCACCATTTATGCATTGGAGAGACTTATTAGAGCACTTAGATCAAGCAAAAAGTCTGTGCGAATATTGAAGGTGGCTGTTTATCCTGGAAATGTGTTGGCAATTAATATGTCAAAGCCTCAAGGATTTAGCTATAAGAGTGGACAGAAGAATCAACTTCAAGCAACTTCAAGCAACGTTCAATTTTTTGAATTTTATTTTATTATGTTATGTACTAATTCGGCCATTGAAATGGATCCCAATAACAATCAATTCAACACGCAAAATTCTTCTGATTACCCATTTAGCTACCAAAATCCCAACAATTATCAACACCCAAATCAATTTCCCAACCAACATCCTCAAAACCCAAATCAATTTCCCAACCAAAATATGATTGTTGAGGATGAACGAGATACATATGCTCAATGTTTGACCGATTTTGAGCAATCTGAGGGAAGTGGATCTAGTACACCGCAACCATACCCGACCGAGGTGTTACCCACCTTTGCAAATCATGTGCGTGCTAGATCAGAGTTGCGTGATCCAAATGCTCATTACGAATTGCAAGCAGATCTAGTGAAGCACATAAGGACAAAGTTTGGAATGTTTCGTGATTGA

Protein sequence

>MsG0180001827.01.T01

MLHAITISNGKATLCSRYVQTYKYKIENEAGYQLIPNVFSGFNSLIASAARGSVTAARVISGQYNPSNGIGLANTSLALFGNKLFALGESDLPYEIKLTPNGDIQTIGRQDFNGKLSMSMTAHPKIDGDTGETFAFRYGPMPPFLTYFRFDANGVKHNDVPVFSMTRPSFLHDFAITKKYAVFTDIQLGMNPLDMISGGSPVGSDPSKVSRIGIIPRYASDESKMKWFDVPGFNIMHAINAWDGEDDEDTVTLIAPNVLSIEHTMERLELVHAMIEKVKINIKTGIVSRQPLSVRNLDFGVINGDYMGKKNRFVYAAIGNPMPKISGVVKIDVLKGEEVGCRLYGEGCYGGEPFFVAREDGEEEDDGYLVSYVHDEKKGESRFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLFVKERLNEESKAYAEMLFDTLARQIGIQGGSINKIQFREFWDCISDQSFDTRLKILFDMVDKDADGRITEEEVKDVWNRTKLGAFVPFDDGLNFNKMIALAIAIGVGIRAIYHLACDFPRILHASNEKYKLNEPFFGEKPSSYWHFVKSWEGVTGILMVVLMAIAFTLANTRFRRNRTKLPKPFNKLTGFNAFWYSHHLFIIVYALLIIHGTKLYLTKEWNHKTTWMYLAIPITIYALERLIRALRSSKKSVRILKVAVYPGNVLAINMSKPQGFSYKSGQKNQLQATSSNVQFFEFYFIMLCTNSAIEMDPNNNQFNTQNSSDYPFSYQNPNNYQHPNQFPNQHPQNPNQFPNQNMIVEDERDTYAQCLTDFEQSEGSGSSTPQPYPTEVLPTFANHVRARSELRDPNAHYELQADLVKHIRTKFGMFRD*