Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032191.01.T02 | XP_013458000.1 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0 | 761 |
| MsG0680032191.01.T01 | XP_013458000.1 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0 | 761 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032191.01.T01 | Q9C907 | 71.649 | 388 | 108 | 2 | 4 | 390 | 3 | 389 | 0 | 576 |
| MsG0680032191.01.T02 | Q9C907 | 71.649 | 388 | 108 | 2 | 4 | 390 | 3 | 389 | 0 | 576 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032191.01.T01 | A0A072URQ0 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0.0 | 761 |
| MsG0680032191.01.T02 | A0A072URQ0 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0.0 | 761 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048887.01 | MsG0680032191.01 | 0.800729 | 1.257060e-48 | 5.896552e-46 |
| MsG0080048896.01 | MsG0680032191.01 | 0.819411 | 1.177953e-52 | 9.057718e-50 |
| MsG0080049024.01 | MsG0680032191.01 | 0.809478 | 1.854971e-50 | 1.090248e-47 |
| MsG0180000017.01 | MsG0680032191.01 | 0.800842 | 1.191887e-48 | 5.607134e-46 |
| MsG0180000040.01 | MsG0680032191.01 | 0.819884 | 9.187283e-53 | 7.158473e-50 |
| MsG0180000490.01 | MsG0680032191.01 | 0.810117 | 1.351590e-50 | 8.079148e-48 |
| MsG0180000491.01 | MsG0680032191.01 | 0.812024 | 5.220720e-51 | 3.282366e-48 |
| MsG0180000549.01 | MsG0680032191.01 | 0.838686 | 2.480950e-57 | 3.348298e-54 |
| MsG0180000655.01 | MsG0680032191.01 | 0.808755 | 2.650060e-50 | 1.527803e-47 |
| MsG0180000976.01 | MsG0680032191.01 | 0.800690 | 1.280375e-48 | 5.999961e-46 |
| MsG0180001664.01 | MsG0680032191.01 | 0.824885 | 6.333555e-54 | 5.683233e-51 |
| MsG0180001827.01 | MsG0680032191.01 | 0.828439 | 8.984244e-55 | 8.930705e-52 |
| MsG0180002982.01 | MsG0680032191.01 | 0.804448 | 2.149413e-49 | 1.108527e-46 |
| MsG0180005283.01 | MsG0680032191.01 | 0.808283 | 3.342149e-50 | 1.903237e-47 |
| MsG0180005471.01 | MsG0680032191.01 | -0.818791 | 1.629676e-52 | 1.231821e-49 |
| MsG0180006135.01 | MsG0680032191.01 | 0.822588 | 2.185837e-53 | 1.837607e-50 |
| MsG0180006159.01 | MsG0680032191.01 | 0.800382 | 1.479403e-48 | 6.878943e-46 |
| MsG0280010584.01 | MsG0680032191.01 | 0.825261 | 5.162520e-54 | 4.682025e-51 |
| MsG0280011222.01 | MsG0680032191.01 | 0.810821 | 9.526534e-51 | 5.801598e-48 |
| MsG0280011281.01 | MsG0680032191.01 | 0.813735 | 2.201770e-51 | 1.449507e-48 |
| MsG0380011662.01 | MsG0680032191.01 | 0.812927 | 3.313254e-51 | 2.133861e-48 |
| MsG0380011739.01 | MsG0680032191.01 | 0.828072 | 1.101755e-54 | 1.083503e-51 |
| MsG0380012583.01 | MsG0680032191.01 | 0.805830 | 1.104521e-49 | 5.902754e-47 |
| MsG0380013773.01 | MsG0680032191.01 | 0.803831 | 2.888694e-49 | 1.466418e-46 |
| MsG0380014231.01 | MsG0680032191.01 | 0.811481 | 6.850629e-51 | 4.245516e-48 |
| MsG0380014466.01 | MsG0680032191.01 | 0.810293 | 1.238481e-50 | 7.436712e-48 |
| MsG0380014558.01 | MsG0680032191.01 | 0.806183 | 9.308864e-50 | 5.020055e-47 |
| MsG0380014728.01 | MsG0680032191.01 | 0.805878 | 1.079183e-49 | 5.774356e-47 |
| MsG0380014795.01 | MsG0680032191.01 | 0.813197 | 2.891153e-51 | 1.875599e-48 |
| MsG0680030754.01 | MsG0680032191.01 | 0.812461 | 4.191409e-51 | 2.666742e-48 |
| MsG0680030902.01 | MsG0680032191.01 | 0.805448 | 1.328154e-49 | 7.028554e-47 |
| MsG0680031204.01 | MsG0680032191.01 | 0.818084 | 2.357622e-52 | 1.747489e-49 |
| MsG0680031997.01 | MsG0680032191.01 | 0.812226 | 4.716308e-51 | 2.981792e-48 |
| MsG0680032160.01 | MsG0680032191.01 | 0.816060 | 6.717807e-52 | 4.711314e-49 |
| MsG0680032191.01 | MsG0680033901.01 | 0.802824 | 4.670884e-49 | 2.310815e-46 |
| MsG0680032191.01 | MsG0680033902.01 | 0.801401 | 9.161709e-49 | 4.371113e-46 |
| MsG0680032191.01 | MsG0680033952.01 | 0.808744 | 2.664574e-50 | 1.535686e-47 |
| MsG0680032191.01 | MsG0680035451.01 | 0.840635 | 7.722116e-58 | 1.106662e-54 |
| MsG0680032191.01 | MsG0780036105.01 | 0.810654 | 1.035329e-50 | 6.276928e-48 |
| MsG0680032191.01 | MsG0780036613.01 | 0.820571 | 6.393722e-53 | 5.077475e-50 |
| MsG0680032191.01 | MsG0780036620.01 | 0.821394 | 4.132155e-53 | 3.357728e-50 |
| MsG0680032191.01 | MsG0780036623.01 | 0.804434 | 2.163915e-49 | 1.115597e-46 |
| MsG0680032191.01 | MsG0780036846.01 | 0.818335 | 2.068798e-52 | 1.544182e-49 |
| MsG0680032191.01 | MsG0780037351.01 | 0.909970 | 3.158675e-82 | 6.304252e-78 |
| MsG0680032191.01 | MsG0780037507.01 | 0.810936 | 8.995280e-51 | 5.495262e-48 |
| MsG0680032191.01 | MsG0780037655.01 | 0.803054 | 4.187114e-49 | 2.083378e-46 |
| MsG0680032191.01 | MsG0780038756.01 | 0.830449 | 2.918664e-55 | 3.075794e-52 |
| MsG0680032191.01 | MsG0780038848.01 | 0.821964 | 3.051519e-53 | 2.519700e-50 |
| MsG0680032191.01 | MsG0780039179.01 | 0.811591 | 6.484288e-51 | 4.029910e-48 |
| MsG0680032191.01 | MsG0780039373.01 | -0.800401 | 1.466682e-48 | 6.822862e-46 |
| MsG0680032191.01 | MsG0780039805.01 | 0.821995 | 3.001273e-53 | 2.480449e-50 |
| MsG0680032191.01 | MsG0780039902.01 | 0.816985 | 4.169455e-52 | 2.999193e-49 |
| MsG0680032191.01 | MsG0780040142.01 | 0.801484 | 8.811412e-49 | 4.212907e-46 |
| MsG0680032191.01 | MsG0780040154.01 | 0.807918 | 3.997743e-50 | 2.254587e-47 |
| MsG0680032191.01 | MsG0780040155.01 | 0.804536 | 2.061345e-49 | 1.065474e-46 |
| MsG0680032191.01 | MsG0780040158.01 | 0.827390 | 1.606858e-54 | 1.549299e-51 |
| MsG0680032191.01 | MsG0780040159.01 | 0.805822 | 1.108655e-49 | 5.923725e-47 |
| MsG0680032191.01 | MsG0780040701.01 | 0.812664 | 3.784533e-51 | 2.420612e-48 |
| MsG0680032191.01 | MsG0780040716.01 | -0.803012 | 4.269817e-49 | 2.122256e-46 |
| MsG0680032191.01 | MsG0780040892.01 | 0.803476 | 3.423221e-49 | 1.721942e-46 |
| MsG0680032191.01 | MsG0780041035.01 | 0.805960 | 1.037071e-49 | 5.560894e-47 |
| MsG0680032191.01 | MsG0780041129.01 | 0.806144 | 9.485525e-50 | 5.110107e-47 |
| MsG0680032191.01 | MsG0880041835.01 | 0.825913 | 3.617367e-54 | 3.342215e-51 |
| MsG0680032191.01 | MsG0880042043.01 | 0.813951 | 1.973603e-51 | 1.306865e-48 |
| MsG0680032191.01 | MsG0880042415.01 | 0.826376 | 2.806181e-54 | 2.627238e-51 |
| MsG0680032191.01 | MsG0880042922.01 | 0.800794 | 1.219623e-48 | 5.730180e-46 |
| MsG0680032191.01 | MsG0880043343.01 | 0.822134 | 2.786519e-53 | 2.312165e-50 |
| MsG0680032191.01 | MsG0880044636.01 | 0.803475 | 3.425596e-49 | 1.723058e-46 |
| MsG0680032191.01 | MsG0880045031.01 | 0.821952 | 3.071664e-53 | 2.535459e-50 |
| MsG0680032191.01 | MsG0880045063.01 | 0.802516 | 5.406980e-49 | 2.653747e-46 |
| MsG0680032191.01 | MsG0880045378.01 | 0.827150 | 1.833833e-54 | 1.755558e-51 |
| MsG0680032191.01 | MsG0880045402.01 | 0.812904 | 3.352435e-51 | 2.157876e-48 |
| MsG0680032191.01 | MsG0880045409.01 | 0.810811 | 9.572708e-51 | 5.828074e-48 |
| MsG0680032191.01 | MsG0880045411.01 | 0.843807 | 1.116115e-58 | 1.766568e-55 |
| MsG0680032191.01 | MsG0880045423.01 | 0.810156 | 1.325757e-50 | 7.932552e-48 |
| MsG0680032191.01 | MsG0880045648.01 | 0.804809 | 1.807357e-49 | 9.409154e-47 |
| MsG0680032191.01 | MsG0880045927.01 | 0.819085 | 1.397672e-52 | 1.065048e-49 |
| MsG0680032191.01 | MsG0880046051.01 | 0.812184 | 4.816221e-51 | 3.041371e-48 |
| MsG0680032191.01 | MsG0880047112.01 | 0.809467 | 1.864813e-50 | 1.095738e-47 |
| MsG0680032191.01 | MsG0880047627.01 | 0.805068 | 1.595573e-49 | 8.361714e-47 |
| MsG0480018658.01 | MsG0680032191.01 | 0.803332 | 3.666046e-49 | 1.837247e-46 |
| MsG0480019604.01 | MsG0680032191.01 | 0.802914 | 4.473895e-49 | 2.218322e-46 |
| MsG0480019644.01 | MsG0680032191.01 | 0.820920 | 5.314547e-53 | 4.262022e-50 |
| MsG0480019693.01 | MsG0680032191.01 | 0.808917 | 2.446360e-50 | 1.416419e-47 |
| MsG0480019752.01 | MsG0680032191.01 | 0.813019 | 3.163016e-51 | 2.042180e-48 |
| MsG0480020122.01 | MsG0680032191.01 | 0.803824 | 2.898554e-49 | 1.471133e-46 |
| MsG0480020229.01 | MsG0680032191.01 | 0.813228 | 2.846910e-51 | 1.848424e-48 |
| MsG0480020363.01 | MsG0680032191.01 | 0.811794 | 5.856772e-51 | 3.659668e-48 |
| MsG0480020533.01 | MsG0680032191.01 | 0.801776 | 7.675890e-49 | 3.697114e-46 |
| MsG0480021039.01 | MsG0680032191.01 | 0.818959 | 1.492931e-52 | 1.133832e-49 |
| MsG0480021101.01 | MsG0680032191.01 | 0.825453 | 4.648485e-54 | 4.238616e-51 |
| MsG0480021124.01 | MsG0680032191.01 | 0.815716 | 8.016629e-52 | 5.569610e-49 |
| MsG0480021260.01 | MsG0680032191.01 | 0.801881 | 7.304648e-49 | 3.527920e-46 |
| MsG0480021308.01 | MsG0680032191.01 | 0.819660 | 1.033713e-52 | 8.004175e-50 |
| MsG0480021497.01 | MsG0680032191.01 | 0.802590 | 5.218730e-49 | 2.566371e-46 |
| MsG0480021565.01 | MsG0680032191.01 | 0.804891 | 1.737972e-49 | 9.067343e-47 |
| MsG0480021597.01 | MsG0680032191.01 | 0.833934 | 4.008664e-56 | 4.686266e-53 |
| MsG0480021788.01 | MsG0680032191.01 | 0.817731 | 2.832900e-52 | 2.079745e-49 |
| MsG0480021789.01 | MsG0680032191.01 | 0.811956 | 5.400163e-51 | 3.388985e-48 |
| MsG0480021795.01 | MsG0680032191.01 | 0.827042 | 1.946449e-54 | 1.857435e-51 |
| MsG0480021967.01 | MsG0680032191.01 | 0.814254 | 1.692259e-51 | 1.129827e-48 |
| MsG0480022411.01 | MsG0680032191.01 | 0.823364 | 1.441283e-53 | 1.238285e-50 |
| MsG0480022458.01 | MsG0680032191.01 | 0.835234 | 1.889920e-56 | 2.297143e-53 |
| MsG0480023103.01 | MsG0680032191.01 | 0.821695 | 3.522340e-53 | 2.886432e-50 |
| MsG0480023104.01 | MsG0680032191.01 | 0.831692 | 1.445437e-55 | 1.580488e-52 |
| MsG0480023148.01 | MsG0680032191.01 | 0.801503 | 8.731685e-49 | 4.176836e-46 |
| MsG0480023169.01 | MsG0680032191.01 | 0.802614 | 5.160298e-49 | 2.539115e-46 |
| MsG0480023211.01 | MsG0680032191.01 | 0.813379 | 2.636635e-51 | 1.719161e-48 |
| MsG0480023376.01 | MsG0680032191.01 | 0.803579 | 3.258766e-49 | 1.643668e-46 |
| MsG0480023498.01 | MsG0680032191.01 | 0.824375 | 8.352659e-54 | 7.384756e-51 |
| MsG0480023531.01 | MsG0680032191.01 | 0.807995 | 3.848771e-50 | 2.175097e-47 |
| MsG0480023705.01 | MsG0680032191.01 | 0.811929 | 5.474305e-51 | 3.432840e-48 |
| MsG0580025105.01 | MsG0680032191.01 | 0.800346 | 1.505024e-48 | 6.991573e-46 |
| MsG0580025259.01 | MsG0680032191.01 | 0.831732 | 1.412735e-55 | 1.546693e-52 |
| MsG0580025301.01 | MsG0680032191.01 | 0.822931 | 1.819362e-53 | 1.544320e-50 |
| MsG0580025373.01 | MsG0680032191.01 | 0.843470 | 1.373863e-58 | 2.151728e-55 |
| MsG0580025447.01 | MsG0680032191.01 | 0.810441 | 1.150906e-50 | 6.937915e-48 |
| MsG0580025610.01 | MsG0680032191.01 | 0.821414 | 4.089973e-53 | 3.325157e-50 |
| MsG0380015077.01 | MsG0680032191.01 | 0.801304 | 9.590699e-49 | 4.564751e-46 |
| MsG0380015501.01 | MsG0680032191.01 | 0.808420 | 3.124277e-50 | 1.785570e-47 |
| MsG0380015719.01 | MsG0680032191.01 | 0.802991 | 4.313795e-49 | 2.142990e-46 |
| MsG0380015795.01 | MsG0680032191.01 | 0.823461 | 1.367830e-53 | 1.178479e-50 |
| MsG0380016042.01 | MsG0680032191.01 | 0.802080 | 6.646894e-49 | 3.226417e-46 |
| MsG0380016456.01 | MsG0680032191.01 | 0.801280 | 9.701341e-49 | 4.614640e-46 |
| MsG0380016478.01 | MsG0680032191.01 | 0.803603 | 3.221871e-49 | 1.625999e-46 |
| MsG0380016568.01 | MsG0680032191.01 | 0.815114 | 1.091323e-51 | 7.457173e-49 |
| MsG0480018098.01 | MsG0680032191.01 | 0.832924 | 7.159813e-56 | 8.119210e-53 |
| MsG0480018100.01 | MsG0680032191.01 | 0.821577 | 3.748923e-53 | 3.061764e-50 |
| MsG0480018101.01 | MsG0680032191.01 | 0.823777 | 1.154125e-53 | 1.003415e-50 |
| MsG0480018108.01 | MsG0680032191.01 | 0.801152 | 1.030189e-48 | 4.884663e-46 |
| MsG0480018190.01 | MsG0680032191.01 | 0.801417 | 9.093548e-49 | 4.340418e-46 |
| MsG0480018196.01 | MsG0680032191.01 | 0.812619 | 3.869668e-51 | 2.472206e-48 |
| MsG0480018202.01 | MsG0680032191.01 | 0.812617 | 3.873352e-51 | 2.474446e-48 |
| MsG0480018203.01 | MsG0680032191.01 | 0.809915 | 1.494613e-50 | 8.886682e-48 |
| MsG0480018323.01 | MsG0680032191.01 | 0.801664 | 8.091732e-49 | 3.886373e-46 |
| MsG0480018337.01 | MsG0680032191.01 | 0.809746 | 1.624857e-50 | 9.618972e-48 |
| MsG0480018338.01 | MsG0680032191.01 | 0.821073 | 4.901332e-53 | 3.947621e-50 |
| MsG0580026211.01 | MsG0680032191.01 | 0.815478 | 9.056286e-52 | 6.251218e-49 |
| MsG0580026521.01 | MsG0680032191.01 | -0.800059 | 1.721477e-48 | 7.938933e-46 |
| MsG0580027183.01 | MsG0680032191.01 | 0.819777 | 9.719975e-53 | 7.551151e-50 |
| MsG0580027276.01 | MsG0680032191.01 | 0.804118 | 2.518672e-49 | 1.288004e-46 |
| MsG0580027761.01 | MsG0680032191.01 | 0.803549 | 3.305384e-49 | 1.665880e-46 |
| MsG0580028093.01 | MsG0680032191.01 | 0.818551 | 1.848180e-52 | 1.387738e-49 |
| MsG0580028422.01 | MsG0680032191.01 | 0.818001 | 2.461948e-52 | 1.820789e-49 |
| MsG0580029433.01 | MsG0680032191.01 | 0.810232 | 1.277002e-50 | 7.655667e-48 |
| MsG0280006706.01 | MsG0680032191.01 | 0.810575 | 1.076980e-50 | 6.515474e-48 |
| MsG0280007079.01 | MsG0680032191.01 | 0.808558 | 2.919605e-50 | 1.674579e-47 |
| MsG0280007248.01 | MsG0680032191.01 | 0.809483 | 1.850933e-50 | 1.088006e-47 |
| MsG0280007754.01 | MsG0680032191.01 | 0.802750 | 4.837743e-49 | 2.388758e-46 |
| MsG0280007853.01 | MsG0680032191.01 | 0.801236 | 9.904691e-49 | 4.706153e-46 |
| MsG0280009103.01 | MsG0680032191.01 | 0.820627 | 6.208465e-53 | 4.937698e-50 |
| MsG0280009901.01 | MsG0680032191.01 | 0.805147 | 1.535848e-49 | 8.065113e-47 |
| MsG0280010356.01 | MsG0680032191.01 | 0.805676 | 1.190046e-49 | 6.334613e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032191.01.T02 | MTR_4g109600 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0.0 | 761 |
| MsG0680032191.01.T02 | MTR_4g109600 | 86.957 | 207 | 24 | 1 | 2 | 208 | 3 | 206 | 9.76e-127 | 368 |
| MsG0680032191.01.T02 | MTR_4g109600 | 80.892 | 157 | 28 | 2 | 236 | 391 | 163 | 318 | 4.78e-83 | 256 |
| MsG0680032191.01.T02 | MTR_5g094230 | 27.011 | 348 | 209 | 15 | 44 | 375 | 37 | 355 | 5.65e-18 | 86.3 |
| MsG0680032191.01.T02 | MTR_5g094230 | 23.620 | 326 | 215 | 10 | 47 | 364 | 358 | 657 | 4.75e-17 | 83.6 |
| MsG0680032191.01.T02 | MTR_5g094230 | 27.011 | 348 | 209 | 15 | 44 | 375 | 37 | 355 | 6.35e-18 | 86.3 |
| MsG0680032191.01.T02 | MTR_5g094230 | 23.620 | 326 | 215 | 10 | 47 | 364 | 358 | 657 | 4.11e-17 | 83.6 |
| MsG0680032191.01.T02 | MTR_2g450160 | 24.771 | 327 | 203 | 10 | 47 | 362 | 516 | 810 | 8.71e-17 | 82.8 |
| MsG0680032191.01.T02 | MTR_2g450160 | 26.437 | 348 | 209 | 13 | 36 | 361 | 174 | 496 | 6.66e-14 | 73.9 |
| MsG0680032191.01.T02 | MTR_3g055610 | 24.771 | 327 | 214 | 11 | 37 | 355 | 29 | 331 | 2.36e-15 | 78.2 |
| MsG0680032191.01.T02 | MTR_3g055610 | 22.222 | 315 | 211 | 8 | 47 | 355 | 358 | 644 | 6.49e-14 | 73.9 |
| MsG0680032191.01.T02 | MTR_4g131380 | 24.615 | 325 | 207 | 14 | 43 | 361 | 51 | 343 | 1.24e-12 | 70.1 |
| MsG0680032191.01.T01 | MTR_4g109600 | 94.872 | 390 | 19 | 1 | 2 | 391 | 3 | 391 | 0.0 | 761 |
| MsG0680032191.01.T01 | MTR_4g109600 | 86.957 | 207 | 24 | 1 | 2 | 208 | 3 | 206 | 9.76e-127 | 368 |
| MsG0680032191.01.T01 | MTR_4g109600 | 80.892 | 157 | 28 | 2 | 236 | 391 | 163 | 318 | 4.78e-83 | 256 |
| MsG0680032191.01.T01 | MTR_5g094230 | 27.011 | 348 | 209 | 15 | 44 | 375 | 37 | 355 | 5.65e-18 | 86.3 |
| MsG0680032191.01.T01 | MTR_5g094230 | 23.620 | 326 | 215 | 10 | 47 | 364 | 358 | 657 | 4.75e-17 | 83.6 |
| MsG0680032191.01.T01 | MTR_5g094230 | 27.011 | 348 | 209 | 15 | 44 | 375 | 37 | 355 | 6.35e-18 | 86.3 |
| MsG0680032191.01.T01 | MTR_5g094230 | 23.620 | 326 | 215 | 10 | 47 | 364 | 358 | 657 | 4.11e-17 | 83.6 |
| MsG0680032191.01.T01 | MTR_2g450160 | 24.771 | 327 | 203 | 10 | 47 | 362 | 516 | 810 | 8.71e-17 | 82.8 |
| MsG0680032191.01.T01 | MTR_2g450160 | 26.437 | 348 | 209 | 13 | 36 | 361 | 174 | 496 | 6.66e-14 | 73.9 |
| MsG0680032191.01.T01 | MTR_3g055610 | 24.771 | 327 | 214 | 11 | 37 | 355 | 29 | 331 | 2.36e-15 | 78.2 |
| MsG0680032191.01.T01 | MTR_3g055610 | 22.222 | 315 | 211 | 8 | 47 | 355 | 358 | 644 | 6.49e-14 | 73.9 |
| MsG0680032191.01.T01 | MTR_4g131380 | 24.615 | 325 | 207 | 14 | 43 | 361 | 51 | 343 | 1.24e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032191.01.T02 | AT1G74210 | 71.649 | 388 | 108 | 2 | 4 | 390 | 3 | 389 | 0.0 | 576 |
| MsG0680032191.01.T02 | AT5G08030 | 74.788 | 353 | 88 | 1 | 16 | 368 | 31 | 382 | 0.0 | 558 |
| MsG0680032191.01.T02 | AT5G08030 | 74.788 | 353 | 88 | 1 | 16 | 368 | 16 | 367 | 0.0 | 558 |
| MsG0680032191.01.T02 | AT1G66970 | 23.734 | 316 | 210 | 9 | 47 | 355 | 391 | 682 | 3.27e-17 | 84.0 |
| MsG0680032191.01.T02 | AT1G66970 | 23.734 | 316 | 210 | 9 | 47 | 355 | 369 | 660 | 3.82e-17 | 84.0 |
| MsG0680032191.01.T02 | AT1G66970 | 23.175 | 315 | 213 | 8 | 47 | 355 | 175 | 466 | 4.36e-17 | 83.6 |
| MsG0680032191.01.T02 | AT3G20520 | 21.231 | 325 | 231 | 7 | 47 | 364 | 340 | 646 | 1.86e-16 | 81.6 |
| MsG0680032191.01.T02 | AT5G55480 | 21.321 | 333 | 232 | 9 | 47 | 372 | 368 | 677 | 1.93e-16 | 81.6 |
| MsG0680032191.01.T02 | AT4G26690 | 22.082 | 317 | 213 | 9 | 47 | 355 | 363 | 653 | 2.71e-16 | 81.3 |
| MsG0680032191.01.T02 | AT1G66980 | 24.051 | 316 | 208 | 8 | 47 | 355 | 401 | 691 | 2.76e-13 | 72.0 |
| MsG0680032191.01.T02 | AT1G66980 | 24.290 | 317 | 206 | 10 | 47 | 355 | 372 | 662 | 2.79e-13 | 72.0 |
| MsG0680032191.01.T02 | AT1G66980 | 24.290 | 317 | 206 | 10 | 47 | 355 | 372 | 662 | 2.92e-13 | 72.0 |
| MsG0680032191.01.T02 | AT1G66980 | 24.290 | 317 | 206 | 10 | 47 | 355 | 355 | 645 | 3.32e-13 | 72.0 |
| MsG0680032191.01.T01 | AT1G74210 | 71.649 | 388 | 108 | 2 | 4 | 390 | 3 | 389 | 0.0 | 576 |
| MsG0680032191.01.T01 | AT5G08030 | 74.788 | 353 | 88 | 1 | 16 | 368 | 31 | 382 | 0.0 | 558 |
| MsG0680032191.01.T01 | AT5G08030 | 74.788 | 353 | 88 | 1 | 16 | 368 | 16 | 367 | 0.0 | 558 |
| MsG0680032191.01.T01 | AT1G66970 | 23.734 | 316 | 210 | 9 | 47 | 355 | 391 | 682 | 3.27e-17 | 84.0 |
| MsG0680032191.01.T01 | AT1G66970 | 23.734 | 316 | 210 | 9 | 47 | 355 | 369 | 660 | 3.82e-17 | 84.0 |
| MsG0680032191.01.T01 | AT1G66970 | 23.175 | 315 | 213 | 8 | 47 | 355 | 175 | 466 | 4.36e-17 | 83.6 |
| MsG0680032191.01.T01 | AT3G20520 | 21.231 | 325 | 231 | 7 | 47 | 364 | 340 | 646 | 1.86e-16 | 81.6 |
| MsG0680032191.01.T01 | AT5G55480 | 21.321 | 333 | 232 | 9 | 47 | 372 | 368 | 677 | 1.93e-16 | 81.6 |
| MsG0680032191.01.T01 | AT4G26690 | 22.082 | 317 | 213 | 9 | 47 | 355 | 363 | 653 | 2.71e-16 | 81.3 |
| MsG0680032191.01.T01 | AT1G66980 | 24.051 | 316 | 208 | 8 | 47 | 355 | 401 | 691 | 2.76e-13 | 72.0 |
| MsG0680032191.01.T01 | AT1G66980 | 24.290 | 317 | 206 | 10 | 47 | 355 | 372 | 662 | 2.79e-13 | 72.0 |
| MsG0680032191.01.T01 | AT1G66980 | 24.290 | 317 | 206 | 10 | 47 | 355 | 372 | 662 | 2.92e-13 | 72.0 |
| MsG0680032191.01.T01 | AT1G66980 | 24.290 | 317 | 206 | 10 | 47 | 355 | 355 | 645 | 3.32e-13 | 72.0 |
Find 19 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTACTGGATCAACAAAA+TGG | 0.274727 | 6:+35889726 | MsG0680032191.01.T01:CDS |
| GCTCTTTATTTAGACAAAAT+AGG | 0.303027 | 6:-35889996 | None:intergenic |
| GTCTTGTCATCTTGACGGTT+AGG | 0.375474 | 6:-35889811 | None:intergenic |
| CTTACAAGGAGTATGATTAC+TGG | 0.378731 | 6:+35889713 | MsG0680032191.01.T01:CDS |
| AATAGCCAATCTATATTGAT+TGG | 0.386554 | 6:+35890089 | MsG0680032191.01.T01:three_prime_UTR |
| TTATTTAATTAGATTGTCAT+AGG | 0.388500 | 6:-35890026 | None:intergenic |
| ATCAACAAAATGGGAATTGA+TGG | 0.404261 | 6:+35889736 | MsG0680032191.01.T01:CDS |
| AAATAAGAAATTAGTAATGT+TGG | 0.432858 | 6:+35890056 | MsG0680032191.01.T01:three_prime_UTR |
| TCTTGTCATCTTGACGGTTA+GGG | 0.433302 | 6:-35889810 | None:intergenic |
| TTCTCATTTCTGTACGTGTA+TGG | 0.438281 | 6:-35889658 | None:intergenic |
| TCCCAGTGAAATCTGTAAAC+AGG | 0.445980 | 6:-35889759 | None:intergenic |
| CAGTAATCATACTCCTTGTA+AGG | 0.464985 | 6:-35889712 | None:intergenic |
| ATGCAGTCTTGTCATCTTGA+CGG | 0.475282 | 6:-35889816 | None:intergenic |
| TAAAGTTGAAATGCAAATAG+TGG | 0.479276 | 6:-35889681 | None:intergenic |
| GATTACTGGATCAACAAAAT+GGG | 0.486674 | 6:+35889727 | MsG0680032191.01.T01:CDS |
| CAATTCCAATCAATATAGAT+TGG | 0.497293 | 6:-35890094 | None:intergenic |
| GGCCTGTTTACAGATTTCAC+TGG | 0.506585 | 6:+35889757 | MsG0680032191.01.T01:CDS |
| CTTTAGTCAAGATCCTTACA+AGG | 0.536799 | 6:+35889699 | MsG0680032191.01.T01:CDS |
| GCCTGTTTACAGATTTCACT+GGG | 0.542364 | 6:+35889758 | MsG0680032191.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | Chr6:35886776-35886795 | MsG0680032191.01.T01:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | Chr6:35886775-35886794 | MsG0680032191.01.T01:intron | 0.0% |
| !! | ATACATATACATATATATAT+GGG | - | Chr6:35887094-35887113 | None:intergenic | 10.0% |
| !! | ATTAAATTGATATAAATAAC+AGG | + | Chr6:35889008-35889027 | MsG0680032191.01.T01:intron | 10.0% |
| !! | ATTTACTTCTTAAAATATAT+TGG | + | Chr6:35887953-35887972 | MsG0680032191.01.T01:intron | 10.0% |
| !! | TATACATATACATATATATA+TGG | - | Chr6:35887095-35887114 | None:intergenic | 10.0% |
| !! | TATATATATATATATATAGC+TGG | + | Chr6:35887169-35887188 | MsG0680032191.01.T01:intron | 10.0% |
| !! | TTTACTTCTTAAAATATATT+GGG | + | Chr6:35887954-35887973 | MsG0680032191.01.T01:intron | 10.0% |
| !!! | AAAAAACAAATATCATTTTT+AGG | - | Chr6:35887710-35887729 | None:intergenic | 10.0% |
| !! | AAATAAGAAATTAGTAATGT+TGG | + | Chr6:35890056-35890075 | MsG0680032191.01.T01:three_prime_UTR | 15.0% |
| !! | GAATATATTTAAAAAGAGAA+AGG | - | Chr6:35887566-35887585 | None:intergenic | 15.0% |
| !! | TAAAAACACTAAAAAAACTA+AGG | + | Chr6:35886868-35886887 | MsG0680032191.01.T01:intron | 15.0% |
| !! | TACATATACATATATATATG+GGG | - | Chr6:35887093-35887112 | None:intergenic | 15.0% |
| !! | TGTTTATAATAGAAAAACAT+GGG | - | Chr6:35886936-35886955 | None:intergenic | 15.0% |
| !! | TTATTTAATTAGATTGTCAT+AGG | - | Chr6:35890029-35890048 | None:intergenic | 15.0% |
| !! | TTGTTTATAATAGAAAAACA+TGG | - | Chr6:35886937-35886956 | None:intergenic | 15.0% |
| !!! | TTAGTTTTTTTAGTGTTTTT+AGG | - | Chr6:35886869-35886888 | None:intergenic | 15.0% |
| !! | AAAGTTTAATAGAGACAAAA+GGG | + | Chr6:35887000-35887019 | MsG0680032191.01.T01:intron | 20.0% |
| !! | AACAAAATGATTTATTGTGA+CGG | + | Chr6:35888691-35888710 | MsG0680032191.01.T01:intron | 20.0% |
| !! | AACAAGTGAAAAATAAATGA+AGG | - | Chr6:35886704-35886723 | None:intergenic | 20.0% |
| !! | AATAAACATTATATTCCAAC+AGG | - | Chr6:35888896-35888915 | None:intergenic | 20.0% |
| !! | AATGGTAACTCAATAAATTA+AGG | - | Chr6:35888174-35888193 | None:intergenic | 20.0% |
| !! | ATTATGCATAAACTAGTATT+TGG | + | Chr6:35887629-35887648 | MsG0680032191.01.T01:intron | 20.0% |
| !! | CAACATTGTATAACATTAAA+CGG | - | Chr6:35889320-35889339 | None:intergenic | 20.0% |
| !! | GAATATAATGTTTATTCCAA+AGG | + | Chr6:35888900-35888919 | MsG0680032191.01.T01:intron | 20.0% |
| !! | TAAAGTTTAATAGAGACAAA+AGG | + | Chr6:35886999-35887018 | MsG0680032191.01.T01:intron | 20.0% |
| !! | TAGTTAGTAAGTATGAAAAT+GGG | + | Chr6:35887214-35887233 | MsG0680032191.01.T01:intron | 20.0% |
| !! | TGTGTATATATCAAATCAAA+CGG | + | Chr6:35889167-35889186 | MsG0680032191.01.T01:CDS | 20.0% |
| !! | TTAGGATAATGATTATTGTA+CGG | + | Chr6:35888803-35888822 | MsG0680032191.01.T01:intron | 20.0% |
| !! | TTAGTTAGTAAGTATGAAAA+TGG | + | Chr6:35887213-35887232 | MsG0680032191.01.T01:intron | 20.0% |
| !!! | AGACGTATTTCTTAATTTTA+GGG | + | Chr6:35888205-35888224 | MsG0680032191.01.T01:intron | 20.0% |
| !!! | CATTACAGTAATATTTTGTT+AGG | - | Chr6:35889377-35889396 | None:intergenic | 20.0% |
| !!! | GTGAGATTATGTTATATTTT+TGG | + | Chr6:35888826-35888845 | MsG0680032191.01.T01:intron | 20.0% |
| !!! | TAGACGTATTTCTTAATTTT+AGG | + | Chr6:35888204-35888223 | MsG0680032191.01.T01:intron | 20.0% |
| !!! | TCATCGATTAAAAAAATCTT+AGG | - | Chr6:35889198-35889217 | None:intergenic | 20.0% |
| ! | AAAGAATGGAATATTGTTTC+TGG | - | Chr6:35888262-35888281 | None:intergenic | 25.0% |
| ! | AAATTACACAGAATAGAATG+AGG | - | Chr6:35888461-35888480 | None:intergenic | 25.0% |
| ! | AATAGCCAATCTATATTGAT+TGG | + | Chr6:35890089-35890108 | MsG0680032191.01.T01:three_prime_UTR | 25.0% |
| ! | ACTTCTTAAAATATATTGGG+AGG | + | Chr6:35887957-35887976 | MsG0680032191.01.T01:intron | 25.0% |
| ! | ATGAAAAGTGAAACATTTGA+AGG | - | Chr6:35886578-35886597 | None:intergenic | 25.0% |
| ! | CAATTCCAATCAATATAGAT+TGG | - | Chr6:35890097-35890116 | None:intergenic | 25.0% |
| ! | CTCAAAAAATCATTCATAAG+CGG | - | Chr6:35889875-35889894 | None:intergenic | 25.0% |
| ! | GATATAAATAACAGGTGAAA+TGG | + | Chr6:35889016-35889035 | MsG0680032191.01.T01:intron | 25.0% |
| ! | GATATATTATCTTCCAAAGA+TGG | + | Chr6:35887770-35887789 | MsG0680032191.01.T01:CDS | 25.0% |
| ! | TAAAGTTGAAATGCAAATAG+TGG | - | Chr6:35889684-35889703 | None:intergenic | 25.0% |
| ! | TACATAAAGCAATATGTTGT+AGG | + | Chr6:35889444-35889463 | MsG0680032191.01.T01:CDS | 25.0% |
| ! | TAGGATAATGATTATTGTAC+GGG | + | Chr6:35888804-35888823 | MsG0680032191.01.T01:intron | 25.0% |
| ! | TATTATCAAGAATAAAGTCG+TGG | - | Chr6:35887811-35887830 | None:intergenic | 25.0% |
| ! | TCAAATCATAAATGTAACCT+AGG | + | Chr6:35887327-35887346 | MsG0680032191.01.T01:intron | 25.0% |
| !! | AGCAATTTTATGTAATAGCT+CGG | - | Chr6:35889842-35889861 | None:intergenic | 25.0% |
| !! | AGTAATATTTTGTTAGGCTT+TGG | - | Chr6:35889371-35889390 | None:intergenic | 25.0% |
| !! | GCTCTTTATTTAGACAAAAT+AGG | - | Chr6:35889999-35890018 | None:intergenic | 25.0% |
| !!! | ATAGCTCTAAAAACATATGA+AGG | - | Chr6:35889598-35889617 | None:intergenic | 25.0% |
| !!! | GTAAAAAAAAAGCATTTGCT+TGG | + | Chr6:35889909-35889928 | MsG0680032191.01.T01:three_prime_UTR | 25.0% |
| !!! | GTTTTTTTAGTGTTTTTAGG+TGG | - | Chr6:35886866-35886885 | None:intergenic | 25.0% |
| !!! | TAGCTCTAAAAACATATGAA+GGG | - | Chr6:35889597-35889616 | None:intergenic | 25.0% |
| !!! | TCTGCTTTTATCACTAATTT+CGG | + | Chr6:35886643-35886662 | MsG0680032191.01.T01:intron | 25.0% |
| !!! | TGTTTTAGTAAAGTACAAGT+AGG | + | Chr6:35887023-35887042 | MsG0680032191.01.T01:intron | 25.0% |
| !!! | TGTTTTGGTAAATAACTAGT+AGG | - | Chr6:35886913-35886932 | None:intergenic | 25.0% |
| AAAACATATGAAGGGAAACA+AGG | - | Chr6:35889589-35889608 | None:intergenic | 30.0% | |
| AAAAGAACATATGAAGTCGA+AGG | + | Chr6:35887869-35887888 | MsG0680032191.01.T01:CDS | 30.0% | |
| AAAAGCTACTATGAGTAGAA+AGG | - | Chr6:35888438-35888457 | None:intergenic | 30.0% | |
| AAAGAACATATGAAGTCGAA+GGG | + | Chr6:35887870-35887889 | MsG0680032191.01.T01:CDS | 30.0% | |
| AAAGCTACTATGAGTAGAAA+GGG | - | Chr6:35888437-35888456 | None:intergenic | 30.0% | |
| AAATAAATGAAGGCAAGGTA+AGG | - | Chr6:35886694-35886713 | None:intergenic | 30.0% | |
| AAGCAATATGTTGTAGGAAT+TGG | + | Chr6:35889450-35889469 | MsG0680032191.01.T01:CDS | 30.0% | |
| ACACAGATATAATCCAGTTA+GGG | - | Chr6:35886605-35886624 | None:intergenic | 30.0% | |
| ACATATAAGAACACCATCTT+TGG | - | Chr6:35887786-35887805 | None:intergenic | 30.0% | |
| ACGAGCAATAGAAAAACAAA+AGG | - | Chr6:35887360-35887379 | None:intergenic | 30.0% | |
| AGAATCTATCTAAGTTATGC+AGG | + | Chr6:35886520-35886539 | MsG0680032191.01.T01:intron | 30.0% | |
| ATCAACAAAATGGGAATTGA+TGG | + | Chr6:35889736-35889755 | MsG0680032191.01.T01:CDS | 30.0% | |
| ATGATTATGTGCAGTCATAT+TGG | + | Chr6:35889394-35889413 | MsG0680032191.01.T01:intron | 30.0% | |
| ATGATTTGATACACCAAGTT+AGG | - | Chr6:35887316-35887335 | None:intergenic | 30.0% | |
| CATATGCACAATAAAAATGC+TGG | - | Chr6:35888732-35888751 | None:intergenic | 30.0% | |
| CATATTGCTTTATGTAGTCT+AGG | - | Chr6:35889440-35889459 | None:intergenic | 30.0% | |
| CATGTTTGTGTACAAATATG+TGG | + | Chr6:35887248-35887267 | MsG0680032191.01.T01:intron | 30.0% | |
| CTTGAAAGTGATGAAAAAAC+TGG | - | Chr6:35888288-35888307 | None:intergenic | 30.0% | |
| GAAAAAACTGGATGAAAGAA+TGG | - | Chr6:35888276-35888295 | None:intergenic | 30.0% | |
| GATATATACACAAGTGAAGT+TGG | - | Chr6:35889159-35889178 | None:intergenic | 30.0% | |
| GATTACTGGATCAACAAAAT+GGG | + | Chr6:35889727-35889746 | MsG0680032191.01.T01:CDS | 30.0% | |
| GTGAAAAATAAATGAAGGCA+AGG | - | Chr6:35886699-35886718 | None:intergenic | 30.0% | |
| GTTTATGCATAATTGTAGCA+TGG | - | Chr6:35887622-35887641 | None:intergenic | 30.0% | |
| TAAATAACAGGTGAAATGGT+CGG | + | Chr6:35889020-35889039 | MsG0680032191.01.T01:intron | 30.0% | |
| TACGTCTATACAAAGCAAAA+TGG | - | Chr6:35888192-35888211 | None:intergenic | 30.0% | |
| TAGTAAGTATGAAAATGGGT+TGG | + | Chr6:35887218-35887237 | MsG0680032191.01.T01:intron | 30.0% | |
| TATCTCAATGTCTTCGTTAT+CGG | + | Chr6:35886476-35886495 | MsG0680032191.01.T01:intron | 30.0% | |
| TATTGTGCATATGCATCTAA+TGG | + | Chr6:35888739-35888758 | MsG0680032191.01.T01:intron | 30.0% | |
| TCTAATGGTTAATGCTGATA+AGG | + | Chr6:35888754-35888773 | MsG0680032191.01.T01:intron | 30.0% | |
| TGAAAGAGATTCCAAAGATA+AGG | - | Chr6:35888497-35888516 | None:intergenic | 30.0% | |
| TGATTACTGGATCAACAAAA+TGG | + | Chr6:35889726-35889745 | MsG0680032191.01.T01:CDS | 30.0% | |
| TGATTATGTGCAGTCATATT+GGG | + | Chr6:35889395-35889414 | MsG0680032191.01.T01:intron | 30.0% | |
| ! | AAGAGAAAGGAATGCAATTT+TGG | - | Chr6:35887553-35887572 | None:intergenic | 30.0% |
| ! | ACATGTTGATTGATAAGTAC+TGG | - | Chr6:35888610-35888629 | None:intergenic | 30.0% |
| ! | AGCATGAAATTTAAGACCTT+TGG | - | Chr6:35888919-35888938 | None:intergenic | 30.0% |
| ! | ATAGAAAAACATGGGTGTTT+TGG | - | Chr6:35886928-35886947 | None:intergenic | 30.0% |
| ! | TATATAGCTGGCTTATTATC+AGG | + | Chr6:35887181-35887200 | MsG0680032191.01.T01:intron | 30.0% |
| ! | TGCAGTTGATTTCACATTAA+AGG | + | Chr6:35888348-35888367 | MsG0680032191.01.T01:intron | 30.0% |
| ! | TTTTTCTATTGCTCGTGATT+GGG | + | Chr6:35887364-35887383 | MsG0680032191.01.T01:CDS | 30.0% |
| !! | ATTGACGTCATTTTCAACTT+TGG | + | Chr6:35887670-35887689 | MsG0680032191.01.T01:intron | 30.0% |
| !! | ATTTTGGCAGAAGATTTAAG+TGG | - | Chr6:35887537-35887556 | None:intergenic | 30.0% |
| !! | GTCTTCATAATTTTCAGGAA+TGG | + | Chr6:35889782-35889801 | MsG0680032191.01.T01:CDS | 30.0% |
| !! | TGTCACTTTAGCTTAAGTTT+AGG | + | Chr6:35888785-35888804 | MsG0680032191.01.T01:intron | 30.0% |
| !! | TTATCTTTGGAATCTCTTTC+AGG | + | Chr6:35888496-35888515 | MsG0680032191.01.T01:intron | 30.0% |
| !!! | AATCACACTGGATTTTTTGT+CGG | + | Chr6:35887896-35887915 | MsG0680032191.01.T01:CDS | 30.0% |
| !!! | AGTACTGGATTTTTTATCTC+AGG | - | Chr6:35888595-35888614 | None:intergenic | 30.0% |
| !!! | CGCTTATGAATGATTTTTTG+AGG | + | Chr6:35889873-35889892 | MsG0680032191.01.T01:exon | 30.0% |
| AAAGATAAGGCAATAGGATG+AGG | - | Chr6:35888484-35888503 | None:intergenic | 35.0% | |
| AAAGGAATTAAAGTCGCTGA+GGG | + | Chr6:35888366-35888385 | MsG0680032191.01.T01:CDS | 35.0% | |
| AAGAACATATGAAGTCGAAG+GGG | + | Chr6:35887871-35887890 | MsG0680032191.01.T01:CDS | 35.0% | |
| AATCCTCTCTTAGTACAATC+CGG | - | Chr6:35888866-35888885 | None:intergenic | 35.0% | |
| AATCTGTTAAGATGTCCAAG+AGG | - | Chr6:35888107-35888126 | None:intergenic | 35.0% | |
| ACTAGTATAGTATCCTTCGA+AGG | - | Chr6:35889477-35889496 | None:intergenic | 35.0% | |
| ACTTCGGAAATATGGATACA+AGG | + | Chr6:35889077-35889096 | MsG0680032191.01.T01:CDS | 35.0% | |
| AGAGTTCATTACCATAGCAT+TGG | + | Chr6:35888543-35888562 | MsG0680032191.01.T01:CDS | 35.0% | |
| AGGATATATTCCAACAACTC+TGG | - | Chr6:35888575-35888594 | None:intergenic | 35.0% | |
| ATCTCAATGTCTTCGTTATC+GGG | + | Chr6:35886477-35886496 | MsG0680032191.01.T01:intron | 35.0% | |
| CAAGTTAGGAGATATTTAGC+TGG | - | Chr6:35887302-35887321 | None:intergenic | 35.0% | |
| CAGCTAAATATCTCCTAACT+TGG | + | Chr6:35887300-35887319 | MsG0680032191.01.T01:intron | 35.0% | |
| CAGTAATCATACTCCTTGTA+AGG | - | Chr6:35889715-35889734 | None:intergenic | 35.0% | |
| CTTCGGAAATATGGATACAA+GGG | + | Chr6:35889078-35889097 | MsG0680032191.01.T01:CDS | 35.0% | |
| CTTGGACATCTTAACAGATT+TGG | + | Chr6:35888107-35888126 | MsG0680032191.01.T01:intron | 35.0% | |
| CTTTAGTCAAGATCCTTACA+AGG | + | Chr6:35889699-35889718 | MsG0680032191.01.T01:CDS | 35.0% | |
| GAATCAGAGGTTCAACTTTA+GGG | + | Chr6:35888390-35888409 | MsG0680032191.01.T01:CDS | 35.0% | |
| GACAAAAAATCCAGTGTGAT+TGG | - | Chr6:35887897-35887916 | None:intergenic | 35.0% | |
| GACACAGATATAATCCAGTT+AGG | - | Chr6:35886606-35886625 | None:intergenic | 35.0% | |
| GATTCCAAAGATAAGGCAAT+AGG | - | Chr6:35888490-35888509 | None:intergenic | 35.0% | |
| GCAAATGACTGTATAAATGC+AGG | - | Chr6:35889135-35889154 | None:intergenic | 35.0% | |
| GGATATATTCCAACAACTCT+GGG | - | Chr6:35888574-35888593 | None:intergenic | 35.0% | |
| GTTCATACCTGTCAAAACAT+TGG | + | Chr6:35889100-35889119 | MsG0680032191.01.T01:CDS | 35.0% | |
| GTTGAAACACTTCGGAAATA+TGG | + | Chr6:35889069-35889088 | MsG0680032191.01.T01:CDS | 35.0% | |
| TAAAGGAATTAAAGTCGCTG+AGG | + | Chr6:35888365-35888384 | MsG0680032191.01.T01:CDS | 35.0% | |
| TCATCCTATTGCCTTATCTT+TGG | + | Chr6:35888483-35888502 | MsG0680032191.01.T01:intron | 35.0% | |
| TGAATCAGAGGTTCAACTTT+AGG | + | Chr6:35888389-35888408 | MsG0680032191.01.T01:CDS | 35.0% | |
| TGGATTATATCTGTGTCCAT+TGG | + | Chr6:35886609-35886628 | MsG0680032191.01.T01:intron | 35.0% | |
| TTCAACACAAGACACTAATC+AGG | + | Chr6:35889227-35889246 | MsG0680032191.01.T01:CDS | 35.0% | |
| TTCTCATTTCTGTACGTGTA+TGG | - | Chr6:35889661-35889680 | None:intergenic | 35.0% | |
| TTGTTAAGTCTTCGTATCGT+AGG | - | Chr6:35886405-35886424 | None:intergenic | 35.0% | |
| TTTAGGGATCCACAGTTTAA+TGG | + | Chr6:35888406-35888425 | MsG0680032191.01.T01:CDS | 35.0% | |
| TTTGGAAGTTTCGAAAGATC+CGG | + | Chr6:35888844-35888863 | MsG0680032191.01.T01:intron | 35.0% | |
| ! | AAACAAAAGGTGCAAAACCT+AGG | - | Chr6:35887347-35887366 | None:intergenic | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | Chr6:35887050-35887069 | MsG0680032191.01.T01:intron | 35.0% |
| ! | ACTTTTCATGAATCCCTAAC+TGG | + | Chr6:35886589-35886608 | MsG0680032191.01.T01:intron | 35.0% |
| ! | AGAGGATTTTTATCACCTGT+TGG | + | Chr6:35888878-35888897 | MsG0680032191.01.T01:intron | 35.0% |
| ! | ATCACATACTTGTTAACCAG+AGG | - | Chr6:35889501-35889520 | None:intergenic | 35.0% |
| ! | CTTACAAGGAGTATGATTAC+TGG | + | Chr6:35889713-35889732 | MsG0680032191.01.T01:CDS | 35.0% |
| ! | CTTTTAGTCCATTTCCTTAG+AGG | + | Chr6:35888968-35888987 | MsG0680032191.01.T01:intron | 35.0% |
| ! | GTTTTTCTATTGCTCGTGAT+TGG | + | Chr6:35887363-35887382 | MsG0680032191.01.T01:CDS | 35.0% |
| ! | TGAAACATTTGAAGGCATGA+AGG | - | Chr6:35886570-35886589 | None:intergenic | 35.0% |
| ! | TGGGAGTCTTCATAATTTTC+AGG | + | Chr6:35889777-35889796 | MsG0680032191.01.T01:CDS | 35.0% |
| ! | TTTTCTATTGCTCGTGATTG+GGG | + | Chr6:35887365-35887384 | MsG0680032191.01.T01:CDS | 35.0% |
| !! | ACAGGTTTGTTGAAACACTT+CGG | + | Chr6:35889061-35889080 | MsG0680032191.01.T01:CDS | 35.0% |
| !! | ATTTCTAGTGACACGTATTC+TGG | + | Chr6:35888039-35888058 | MsG0680032191.01.T01:intron | 35.0% |
| !!! | GTTTCAACCAATGTTTTGAC+AGG | - | Chr6:35889110-35889129 | None:intergenic | 35.0% |
| !!! | TGATTTTTTGAGGTGTCAGA+TGG | + | Chr6:35889883-35889902 | MsG0680032191.01.T01:exon | 35.0% |
| !!! | TTTTTTGCAGAGAGCTATTG+AGG | + | Chr6:35887724-35887743 | MsG0680032191.01.T01:intron | 35.0% |
| AACAATGACCTTAGTGAGTG+AGG | + | Chr6:35886420-35886439 | MsG0680032191.01.T01:five_prime_UTR | 40.0% | |
| ACTTGTATTGAACGTCCTCT+TGG | + | Chr6:35888089-35888108 | MsG0680032191.01.T01:intron | 40.0% | |
| AGGGACTAACCATTAAACTG+TGG | - | Chr6:35888418-35888437 | None:intergenic | 40.0% | |
| ATCCAATGAACTTCTGTCTG+TGG | + | Chr6:35888647-35888666 | MsG0680032191.01.T01:intron | 40.0% | |
| ATGATTGTTGACGATGATGC+AGG | + | Chr6:35889630-35889649 | MsG0680032191.01.T01:intron | 40.0% | |
| CAAGTATGTGATGACTCCTT+CGG | + | Chr6:35889509-35889528 | MsG0680032191.01.T01:CDS | 40.0% | |
| GCCTGTTTACAGATTTCACT+GGG | + | Chr6:35889758-35889777 | MsG0680032191.01.T01:CDS | 40.0% | |
| GGATACTATACTAGTACCTC+TGG | + | Chr6:35889482-35889501 | MsG0680032191.01.T01:CDS | 40.0% | |
| GTATCGTAGGAACGTGAAAA+TGG | - | Chr6:35886392-35886411 | None:intergenic | 40.0% | |
| TATGGGCGAAAAGTTTGAAG+AGG | - | Chr6:35887447-35887466 | None:intergenic | 40.0% | |
| TCCCAGTGAAATCTGTAAAC+AGG | - | Chr6:35889762-35889781 | None:intergenic | 40.0% | |
| TCTTGTCATCTTGACGGTTA+GGG | - | Chr6:35889813-35889832 | None:intergenic | 40.0% | |
| TTTCTATTGCTCGTGATTGG+GGG | + | Chr6:35887366-35887385 | MsG0680032191.01.T01:CDS | 40.0% | |
| ! | ATGCAGTCTTGTCATCTTGA+CGG | - | Chr6:35889819-35889838 | None:intergenic | 40.0% |
| ! | GCAGAAGCATGATATACCAA+TGG | - | Chr6:35886628-35886647 | None:intergenic | 40.0% |
| ! | TGACACGTATTCTGGAAAGT+CGG | + | Chr6:35888047-35888066 | MsG0680032191.01.T01:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | Chr6:35887054-35887073 | MsG0680032191.01.T01:intron | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | Chr6:35887053-35887072 | MsG0680032191.01.T01:intron | 40.0% |
| AAGAAAGCAGACAGCCTCTA+AGG | - | Chr6:35888985-35889004 | None:intergenic | 45.0% | |
| CCATATAACGTTGCGCATAG+GGG | + | Chr6:35887462-35887481 | MsG0680032191.01.T01:CDS | 45.0% | |
| CCCATATAACGTTGCGCATA+GGG | + | Chr6:35887461-35887480 | MsG0680032191.01.T01:CDS | 45.0% | |
| CCCTATGCGCAACGTTATAT+GGG | - | Chr6:35887464-35887483 | None:intergenic | 45.0% | |
| GATCCGGATTGTACTAAGAG+AGG | + | Chr6:35888860-35888879 | MsG0680032191.01.T01:intron | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | - | Chr6:35887060-35887079 | None:intergenic | 45.0% | |
| GGCCTGTTTACAGATTTCAC+TGG | + | Chr6:35889757-35889776 | MsG0680032191.01.T01:CDS | 45.0% | |
| GTCTTGTCATCTTGACGGTT+AGG | - | Chr6:35889814-35889833 | None:intergenic | 45.0% | |
| TAACAGGTGAAATGGTCGGA+CGG | + | Chr6:35889024-35889043 | MsG0680032191.01.T01:intron | 45.0% | |
| TGCCACAGACAGAAGTTCAT+TGG | - | Chr6:35888652-35888671 | None:intergenic | 45.0% | |
| TGTAGGAATTGGACCTTCGA+AGG | + | Chr6:35889461-35889480 | MsG0680032191.01.T01:CDS | 45.0% | |
| TTGCAGAGAGCTATTGAGGA+AGG | + | Chr6:35887728-35887747 | MsG0680032191.01.T01:intron | 45.0% | |
| TTGCCAGGAAGTGGATACAA+AGG | - | Chr6:35887402-35887421 | None:intergenic | 45.0% | |
| TTGTATCCACTTCCTGGCAA+AGG | + | Chr6:35887402-35887421 | MsG0680032191.01.T01:CDS | 45.0% | |
| !! | ATATATATATATATATATAG+GGG | + | Chr6:35886826-35886845 | MsG0680032191.01.T01:intron | 5.0% |
| ACGGCAAACGATTTGAGGAC+AGG | + | Chr6:35889043-35889062 | MsG0680032191.01.T01:CDS | 50.0% | |
| ACTTCCTGAAGAAACTCGCG+AGG | + | Chr6:35887497-35887516 | MsG0680032191.01.T01:CDS | 50.0% | |
| AGAAACTCGCGAGGCATATC+TGG | + | Chr6:35887506-35887525 | MsG0680032191.01.T01:CDS | 50.0% | |
| AGGCCTTTGTATCCACTTCC+TGG | + | Chr6:35887396-35887415 | MsG0680032191.01.T01:CDS | 50.0% | |
| ATTAACGTCGTTGCTTGCCG+CGG | - | Chr6:35886363-35886382 | None:intergenic | 50.0% | |
| CAGATTATGAGCATGTGCCC+TGG | - | Chr6:35889544-35889563 | None:intergenic | 50.0% | |
| CCCCTATGCGCAACGTTATA+TGG | - | Chr6:35887465-35887484 | None:intergenic | 50.0% | |
| GAAGAGGCTGCTTACTTCCA+TGG | - | Chr6:35887431-35887450 | None:intergenic | 50.0% | |
| GCCCATATAACGTTGCGCAT+AGG | + | Chr6:35887460-35887479 | MsG0680032191.01.T01:CDS | 50.0% | |
| GCTGTGTTCCTCACTCACTA+AGG | - | Chr6:35886431-35886450 | None:intergenic | 50.0% | |
| GGCACATGCTCATAATCTGC+AGG | + | Chr6:35889545-35889564 | MsG0680032191.01.T01:CDS | 50.0% | |
| TATGCCTCGCGAGTTTCTTC+AGG | - | Chr6:35887504-35887523 | None:intergenic | 50.0% | |
| TCCTTCGGATCTTGTTGCCA+GGG | + | Chr6:35889524-35889543 | MsG0680032191.01.T01:CDS | 50.0% | |
| TCTGGGTGCATCCAATGCTA+TGG | - | Chr6:35888557-35888576 | None:intergenic | 50.0% | |
| TTGGATGCACCCAGAGTTGT+TGG | + | Chr6:35888562-35888581 | MsG0680032191.01.T01:CDS | 50.0% | |
| ! | GCAGACAGCCTCTAAGGAAA+TGG | - | Chr6:35888979-35888998 | None:intergenic | 50.0% |
| AGTCGCTGAGGGTGAATCAG+AGG | + | Chr6:35888377-35888396 | MsG0680032191.01.T01:CDS | 55.0% | |
| ATTGCTCGTGATTGGGGGCA+CGG | + | Chr6:35887371-35887390 | MsG0680032191.01.T01:CDS | 55.0% | |
| CGTTGCTTGCCGCGGAAATA+GGG | - | Chr6:35886355-35886374 | None:intergenic | 55.0% | |
| CTCCTTCGGATCTTGTTGCC+AGG | + | Chr6:35889523-35889542 | MsG0680032191.01.T01:CDS | 55.0% | |
| CTTCCATGGTCACCTTTGCC+AGG | - | Chr6:35887417-35887436 | None:intergenic | 55.0% | |
| CTTCCTGGCAAAGGTGACCA+TGG | + | Chr6:35887411-35887430 | MsG0680032191.01.T01:CDS | 55.0% | |
| GTCGGACGGCAAACGATTTG+AGG | + | Chr6:35889038-35889057 | MsG0680032191.01.T01:CDS | 55.0% | |
| GTTGCGCATAGGGGCTCAAA+TGG | + | Chr6:35887471-35887490 | MsG0680032191.01.T01:CDS | 55.0% | |
| TCGTTGCTTGCCGCGGAAAT+AGG | - | Chr6:35886356-35886375 | None:intergenic | 55.0% | |
| TGGTCACCTTTGCCAGGAAG+TGG | - | Chr6:35887411-35887430 | None:intergenic | 55.0% | |
| GCCCTGGCAACAAGATCCGA+AGG | - | Chr6:35889528-35889547 | None:intergenic | 60.0% | |
| GTCGAAGGGGCCAATCACAC+TGG | + | Chr6:35887884-35887903 | MsG0680032191.01.T01:CDS | 60.0% | |
| ! | TCGTGATTGGGGGCACGGCT+AGG | + | Chr6:35887376-35887395 | MsG0680032191.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 35886346 | 35890197 | 35886346 | ID=MsG0680032191.01;Name=MsG0680032191.01 |
| Chr6 | mRNA | 35886346 | 35890183 | 35886346 | ID=MsG0680032191.01.T01;Parent=MsG0680032191.01;Name=MsG0680032191.01.T01;_AED=0.48;_eAED=0.48;_QI=137|1|1|1|0.75|0.55|9|230|391 |
| Chr6 | exon | 35889652 | 35889940 | 35889652 | ID=MsG0680032191.01.T01:exon:19536;Parent=MsG0680032191.01.T01 |
| Chr6 | exon | 35890009 | 35890183 | 35890009 | ID=MsG0680032191.01.T01:exon:19537;Parent=MsG0680032191.01.T01 |
| Chr6 | five_prime_UTR | 35886346 | 35886482 | 35886346 | ID=MsG0680032191.01.T01:five_prime_utr;Parent=MsG0680032191.01.T01 |
| Chr6 | CDS | 35886483 | 35886498 | 35886483 | ID=MsG0680032191.01.T01:cds;Parent=MsG0680032191.01.T01 |
| Chr6 | CDS | 35887349 | 35887527 | 35887349 | ID=MsG0680032191.01.T01:cds;Parent=MsG0680032191.01.T01 |
| Chr6 | CDS | 35887734 | 35887917 | 35887734 | ID=MsG0680032191.01.T01:cds;Parent=MsG0680032191.01.T01 |
| Chr6 | CDS | 35888353 | 35888427 | 35888353 | ID=MsG0680032191.01.T01:cds;Parent=MsG0680032191.01.T01 |
| Chr6 | CDS | 35888518 | 35888627 | 35888518 | ID=MsG0680032191.01.T01:cds;Parent=MsG0680032191.01.T01 |
| Chr6 | CDS | 35889030 | 35889248 | 35889030 | ID=MsG0680032191.01.T01:cds;Parent=MsG0680032191.01.T01 |
| Chr6 | CDS | 35889408 | 35889566 | 35889408 | ID=MsG0680032191.01.T01:cds;Parent=MsG0680032191.01.T01 |
| Chr6 | CDS | 35889652 | 35889885 | 35889652 | ID=MsG0680032191.01.T01:cds;Parent=MsG0680032191.01.T01 |
| Chr6 | three_prime_UTR | 35889886 | 35889940 | 35889886 | ID=MsG0680032191.01.T01:three_prime_utr;Parent=MsG0680032191.01.T01 |
| Chr6 | three_prime_UTR | 35890009 | 35890183 | 35890009 | ID=MsG0680032191.01.T01:three_prime_utr;Parent=MsG0680032191.01.T01 |
| Chr6 | mRNA | 35886346 | 35890197 | 35886346 | ID=MsG0680032191.01.T02;Parent=MsG0680032191.01;Name=MsG0680032191.01.T02;_AED=0.48;_eAED=0.48;_QI=137|1|1|1|0.85|0.75|8|312|391 |
| Chr6 | exon | 35889652 | 35890197 | 35889652 | ID=MsG0680032191.01.T02:exon:19538;Parent=MsG0680032191.01.T02 |
| Chr6 | five_prime_UTR | 35886346 | 35886482 | 35886346 | ID=MsG0680032191.01.T02:five_prime_utr;Parent=MsG0680032191.01.T02 |
| Chr6 | CDS | 35886483 | 35886498 | 35886483 | ID=MsG0680032191.01.T02:cds;Parent=MsG0680032191.01.T02 |
| Chr6 | CDS | 35887349 | 35887527 | 35887349 | ID=MsG0680032191.01.T02:cds;Parent=MsG0680032191.01.T02 |
| Chr6 | CDS | 35887734 | 35887917 | 35887734 | ID=MsG0680032191.01.T02:cds;Parent=MsG0680032191.01.T02 |
| Chr6 | CDS | 35888353 | 35888427 | 35888353 | ID=MsG0680032191.01.T02:cds;Parent=MsG0680032191.01.T02 |
| Chr6 | CDS | 35888518 | 35888627 | 35888518 | ID=MsG0680032191.01.T02:cds;Parent=MsG0680032191.01.T02 |
| Chr6 | CDS | 35889030 | 35889248 | 35889030 | ID=MsG0680032191.01.T02:cds;Parent=MsG0680032191.01.T02 |
| Chr6 | CDS | 35889408 | 35889566 | 35889408 | ID=MsG0680032191.01.T02:cds;Parent=MsG0680032191.01.T02 |
| Chr6 | CDS | 35889652 | 35889885 | 35889652 | ID=MsG0680032191.01.T02:cds;Parent=MsG0680032191.01.T02 |
| Chr6 | three_prime_UTR | 35889886 | 35890197 | 35889886 | ID=MsG0680032191.01.T02:three_prime_utr;Parent=MsG0680032191.01.T02 |
| Gene Sequence |
| Protein sequence |
