AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042922.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042922.01.T01 MTR_8g024380 96.450 676 23 1 1 675 86 761 0.0 1339
MsG0880042922.01.T01 MTR_1g078110 82.249 676 117 2 1 676 85 757 0.0 1155
MsG0880042922.01.T01 MTR_8g024420 70.545 679 191 6 1 672 45 721 0.0 964
MsG0880042922.01.T01 MTR_2g049200 72.206 680 178 7 1 672 79 755 0.0 964
MsG0880042922.01.T01 MTR_8g024390 70.044 681 193 7 1 672 79 757 0.0 947
MsG0880042922.01.T01 MTR_7g118080 68.041 679 208 6 1 675 85 758 0.0 921
MsG0880042922.01.T01 MTR_8g024370 68.850 687 194 9 1 672 75 756 0.0 915
MsG0880042922.01.T01 MTR_1g079120 52.117 685 310 11 1 673 83 761 0.0 682
MsG0880042922.01.T01 MTR_7g079310 50.437 686 320 11 1 673 86 764 0.0 678
MsG0880042922.01.T01 MTR_7g079300 50.436 688 316 13 1 673 89 766 0.0 668
MsG0880042922.01.T01 MTR_4g073540 44.006 709 356 19 1 676 71 771 0.0 538
MsG0880042922.01.T01 MTR_7g075900 42.877 702 353 13 1 672 88 771 1.54e-175 520
MsG0880042922.01.T01 MTR_2g042130 41.429 700 374 12 3 676 87 776 3.01e-175 519
MsG0880042922.01.T01 MTR_8g022870 42.496 713 367 16 1 676 73 779 3.92e-171 509
MsG0880042922.01.T01 MTR_7g098630 42.898 704 353 16 1 672 74 760 8.10e-171 511
MsG0880042922.01.T01 MTR_4g095360 41.847 693 374 12 1 673 72 755 1.26e-170 506
MsG0880042922.01.T01 MTR_1g102350 40.284 705 377 15 1 675 89 779 8.12e-170 505
MsG0880042922.01.T01 MTR_3g102810 43.208 692 364 12 2 670 67 752 1.28e-166 496
MsG0880042922.01.T01 MTR_5g016120 42.385 696 363 13 1 671 77 759 1.70e-165 494
MsG0880042922.01.T01 MTR_4g125180 40.514 701 367 18 2 670 67 749 2.26e-164 490
MsG0880042922.01.T01 MTR_8g021130 42.330 704 358 20 1 670 83 772 3.25e-164 491
MsG0880042922.01.T01 MTR_0047s0120 42.319 690 370 12 1 670 73 754 6.15e-164 489
MsG0880042922.01.T01 MTR_4g102400 40.288 695 362 17 1 672 88 752 5.70e-161 482
MsG0880042922.01.T01 MTR_1g018510 41.917 699 367 16 2 670 34 723 1.23e-159 477
MsG0880042922.01.T01 MTR_5g011310 41.176 697 351 17 2 672 90 753 6.01e-151 456
MsG0880042922.01.T01 MTR_5g025010 39.714 700 372 19 1 674 44 719 2.79e-148 448
MsG0880042922.01.T01 MTR_5g025010 39.714 700 372 19 1 674 76 751 6.43e-148 448
MsG0880042922.01.T01 MTR_3g082200 39.662 711 366 19 1 672 83 769 4.42e-147 446
MsG0880042922.01.T01 MTR_4g134320 39.377 706 373 17 1 672 81 765 5.83e-147 446
MsG0880042922.01.T01 MTR_5g011340 40.544 698 354 17 2 672 87 750 6.85e-147 445
MsG0880042922.01.T01 MTR_5g011320 40.086 696 359 17 2 672 83 745 1.07e-146 444
MsG0880042922.01.T01 MTR_7g098070 39.604 707 371 16 1 673 78 762 3.91e-146 444
MsG0880042922.01.T01 MTR_5g096750 40.621 709 360 22 1 674 84 766 5.68e-145 441
MsG0880042922.01.T01 MTR_5g011190 39.857 700 362 18 2 675 90 756 2.08e-144 439
MsG0880042922.01.T01 MTR_8g072440 38.286 700 380 16 1 674 39 712 3.73e-144 437
MsG0880042922.01.T01 MTR_8g072440 38.286 700 380 16 1 674 81 754 1.39e-143 437
MsG0880042922.01.T01 MTR_5g011370 39.598 697 362 18 2 672 110 773 9.89e-143 435
MsG0880042922.01.T01 MTR_7g081750 38.239 727 382 17 1 672 83 797 1.56e-142 436
MsG0880042922.01.T01 MTR_8g083220 39.246 716 369 18 1 676 89 778 2.05e-142 434
MsG0880042922.01.T01 MTR_7g081580 39.474 722 365 22 1 672 84 783 2.10e-142 435
MsG0880042922.01.T01 MTR_4g103430 39.774 709 374 17 1 674 80 770 3.29e-142 434
MsG0880042922.01.T01 MTR_4g103480 39.745 707 374 18 1 672 97 786 5.54e-142 434
MsG0880042922.01.T01 MTR_5g011280 39.255 698 363 17 1 672 93 755 7.11e-142 432
MsG0880042922.01.T01 MTR_3g082200 40.271 663 339 18 43 672 8 646 7.39e-141 426
MsG0880042922.01.T01 MTR_4g103450 39.745 707 374 18 1 672 54 743 1.22e-140 429
MsG0880042922.01.T01 MTR_7g081420 39.221 719 372 21 1 672 84 784 1.16e-139 427
MsG0880042922.01.T01 MTR_7g081500 39.972 713 374 20 1 672 83 782 1.42e-139 427
MsG0880042922.01.T01 MTR_4g103400 39.691 713 373 19 1 672 80 776 6.70e-139 426
MsG0880042922.01.T01 MTR_5g085690 39.227 724 372 17 1 672 81 788 1.07e-138 425
MsG0880042922.01.T01 MTR_3g104930 38.881 715 373 18 1 674 72 763 4.24e-138 423
MsG0880042922.01.T01 MTR_8g042670 38.364 709 372 19 1 674 81 759 3.14e-137 421
MsG0880042922.01.T01 MTR_7g481600 38.858 718 375 21 1 672 84 783 3.79e-137 422
MsG0880042922.01.T01 MTR_8g042710 37.115 714 389 17 1 674 72 765 8.44e-137 419
MsG0880042922.01.T01 MTR_7g034380 38.362 696 364 19 1 674 41 693 6.27e-136 415
MsG0880042922.01.T01 MTR_3g061110 38.054 699 380 16 1 672 80 752 5.39e-135 414
MsG0880042922.01.T01 MTR_8g033150 38.627 699 364 17 1 672 64 724 8.32e-135 413
MsG0880042922.01.T01 MTR_8g033150 38.770 699 363 18 1 672 91 751 9.54e-135 414
MsG0880042922.01.T01 MTR_4g053630 38.701 708 377 19 1 675 49 732 1.47e-134 413
MsG0880042922.01.T01 MTR_7g081380 38.608 733 379 20 1 672 84 806 2.94e-134 414
MsG0880042922.01.T01 MTR_3g082200 40.596 638 322 18 68 672 18 631 7.79e-134 408
MsG0880042922.01.T01 MTR_5g011260 39.260 703 354 20 3 675 95 754 1.47e-133 411
MsG0880042922.01.T01 MTR_1g006990 38.310 710 350 23 1 675 81 737 9.11e-133 408
MsG0880042922.01.T01 MTR_4g053630 39.586 677 352 19 32 675 3 655 9.67e-133 405
MsG0880042922.01.T01 MTR_6g055570 37.838 703 352 22 1 672 81 729 1.10e-132 408
MsG0880042922.01.T01 MTR_5g011270 39.080 696 363 16 1 672 93 751 1.62e-132 408
MsG0880042922.01.T01 MTR_2g018135 38.304 731 373 19 1 674 75 784 1.42e-131 407
MsG0880042922.01.T01 MTR_1g007030 37.765 707 356 21 1 675 81 735 1.56e-131 405
MsG0880042922.01.T01 MTR_4g103490 38.889 720 372 20 1 672 84 783 1.81e-131 406
MsG0880042922.01.T01 MTR_8g006680 38.571 700 352 24 1 675 79 725 4.19e-129 399
MsG0880042922.01.T01 MTR_8g005300 38.571 700 352 24 1 675 79 725 4.19e-129 399
MsG0880042922.01.T01 MTR_8g005640 38.571 700 352 24 1 675 79 725 4.19e-129 399
MsG0880042922.01.T01 MTR_7g104200 37.733 697 375 16 1 672 79 741 3.94e-128 396
MsG0880042922.01.T01 MTR_2g018125 37.775 728 378 20 1 673 77 784 7.34e-128 397
MsG0880042922.01.T01 MTR_5g055920 40.156 640 327 17 68 672 48 666 3.63e-127 392
MsG0880042922.01.T01 MTR_3g114420 37.115 714 382 19 1 673 78 765 4.22e-127 394
MsG0880042922.01.T01 MTR_1g048110 37.960 706 354 24 1 675 81 733 8.35e-127 393
MsG0880042922.01.T01 MTR_8g079900 37.356 696 377 17 1 672 81 741 1.50e-126 392
MsG0880042922.01.T01 MTR_4g053635 37.179 702 379 22 8 675 2 675 1.15e-125 388
MsG0880042922.01.T01 MTR_8g079900 37.537 674 362 17 23 672 5 643 1.52e-124 384
MsG0880042922.01.T01 MTR_8g005710 37.074 704 371 20 1 675 41 701 1.83e-124 385
MsG0880042922.01.T01 MTR_8g042670 38.249 651 340 18 55 674 16 635 3.22e-124 383
MsG0880042922.01.T01 MTR_3g010080 39.574 705 346 28 1 675 80 734 4.48e-124 385
MsG0880042922.01.T01 MTR_4g103495 40.152 660 340 15 1 623 81 722 3.57e-123 384
MsG0880042922.01.T01 MTR_7g075890 37.159 697 377 18 1 672 237 897 2.28e-122 386
MsG0880042922.01.T01 MTR_4g103495 40.094 641 332 15 68 674 3 625 3.10e-122 377
MsG0880042922.01.T01 MTR_6g055410 36.819 698 348 22 1 672 81 711 5.03e-121 377
MsG0880042922.01.T01 MTR_6g075370 36.337 688 324 17 1 663 79 677 2.04e-119 372
MsG0880042922.01.T01 MTR_3g464790 37.728 713 349 24 1 674 77 733 2.01e-116 365
MsG0880042922.01.T01 MTR_3g452290 33.918 684 308 21 21 675 3 571 1.39e-104 330
MsG0880042922.01.T01 MTR_3g451220 33.918 684 308 21 21 675 3 571 1.39e-104 330
MsG0880042922.01.T01 MTR_2g044630 34.478 699 361 25 1 674 81 707 8.90e-104 332
MsG0880042922.01.T01 MTR_4g127480 33.955 751 381 27 1 671 97 812 4.61e-99 322
MsG0880042922.01.T01 MTR_7g079295 57.609 276 114 3 1 274 88 362 6.70e-99 313
MsG0880042922.01.T01 MTR_7g079295 49.669 151 71 3 525 673 363 510 3.82e-36 143
MsG0880042922.01.T01 MTR_3g114410 40.310 516 268 14 1 489 78 580 7.89e-98 312
MsG0880042922.01.T01 MTR_8g042710 37.977 524 279 11 1 489 72 584 5.10e-97 313
MsG0880042922.01.T01 MTR_2g037850 35.725 683 347 25 1 613 97 757 2.23e-95 312
MsG0880042922.01.T01 MTR_2g042640 34.143 659 312 21 1 634 50 611 8.03e-93 300
MsG0880042922.01.T01 MTR_4g132620 31.063 734 416 18 1 667 99 809 2.30e-90 299
MsG0880042922.01.T01 MTR_8g089230 32.215 745 412 26 1 674 125 847 2.87e-83 281
MsG0880042922.01.T01 MTR_2g046740 31.351 740 422 25 1 672 117 838 6.11e-79 269
MsG0880042922.01.T01 MTR_2g042650 32.036 668 307 23 36 675 97 645 9.61e-79 264
MsG0880042922.01.T01 MTR_4g071560 36.557 517 261 14 1 490 44 520 1.35e-75 253
MsG0880042922.01.T01 MTR_8g027660 61.538 195 51 1 482 676 80 250 3.09e-75 242
MsG0880042922.01.T01 MTR_5g044060 78.676 136 29 0 386 521 1 136 1.27e-69 225
MsG0880042922.01.T01 MTR_8g027260 40.065 307 167 5 373 675 361 654 5.06e-58 207
MsG0880042922.01.T01 MTR_8g027260 40.569 281 148 5 1 279 81 344 1.73e-54 198
MsG0880042922.01.T01 MTR_5g081100 32.426 441 215 12 1 418 46 426 1.11e-50 182
MsG0880042922.01.T01 MTR_3g114160 34.615 364 173 8 1 345 15 332 3.29e-45 166
MsG0880042922.01.T01 MTR_5g081280 37.363 273 131 7 1 270 66 301 6.32e-45 162
MsG0880042922.01.T01 MTR_2g070250 32.471 348 182 13 79 414 100 406 1.63e-36 142
MsG0880042922.01.T01 MTR_4g126230 38.462 208 109 6 398 600 55 248 3.33e-35 134
MsG0880042922.01.T01 MTR_3g114140 38.710 248 134 7 391 630 184 421 2.37e-33 133
MsG0880042922.01.T01 MTR_3g114140 41.830 153 60 2 129 278 27 153 7.49e-26 111
MsG0880042922.01.T01 MTR_2g070260 38.756 209 106 8 458 660 1 193 3.23e-33 127
MsG0880042922.01.T01 MTR_8g092940 35.714 210 119 5 1 210 36 229 2.30e-29 117
MsG0880042922.01.T01 MTR_4g053665 33.977 259 125 7 417 675 1 213 8.82e-28 112
MsG0880042922.01.T01 MTR_7g081660 37.569 181 103 4 494 672 380 552 7.04e-27 116
MsG0880042922.01.T01 MTR_5g081130 36.158 177 99 6 501 672 5 172 1.80e-21 93.6
MsG0880042922.01.T01 MTR_5g011300 51.087 92 43 1 458 549 1 90 2.12e-18 81.3
MsG0880042922.01.T01 MTR_4g118440 28.968 252 121 11 416 662 1 199 1.87e-15 76.6
MsG0880042922.01.T01 MTR_3g114400 31.395 172 89 5 510 673 13 163 2.11e-14 72.0
MsG0880042922.01.T01 MTR_8g027670 51.250 80 39 0 546 625 33 112 1.57e-13 67.8
MsG0880042922.01.T01 MTR_3g005755 50.685 73 30 3 449 518 237 306 3.77e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042922.01.T01 AT5G67090 47.515 684 300 17 1 661 68 715 0.0 572
MsG0880042922.01.T01 AT4G34980 42.817 703 369 16 1 676 66 762 0.0 535
MsG0880042922.01.T01 AT2G05920 42.302 695 361 13 1 670 68 747 3.64e-174 516
MsG0880042922.01.T01 AT5G67360 42.796 701 355 12 1 673 73 755 5.74e-173 513
MsG0880042922.01.T01 AT3G14240 42.053 711 370 14 1 676 70 773 2.79e-170 506
MsG0880042922.01.T01 AT1G01900 43.777 699 352 14 1 672 87 771 3.09e-169 503
MsG0880042922.01.T01 AT1G04110 40.736 707 373 14 1 674 79 772 6.38e-168 500
MsG0880042922.01.T01 AT5G51750 40.143 700 385 13 1 675 87 777 2.37e-162 486
MsG0880042922.01.T01 AT3G14067 40.429 700 380 17 1 672 77 767 3.17e-162 486
MsG0880042922.01.T01 AT1G20160 40.423 710 364 18 1 673 36 723 2.34e-151 456
MsG0880042922.01.T01 AT1G20160 40.423 710 364 18 1 673 75 762 1.15e-150 456
MsG0880042922.01.T01 AT2G04160 38.920 722 361 19 1 674 83 772 2.47e-146 444
MsG0880042922.01.T01 AT5G59810 38.710 713 369 18 1 674 93 776 7.82e-135 415
MsG0880042922.01.T01 AT4G10550 39.124 708 374 21 1 672 24 710 1.94e-133 409
MsG0880042922.01.T01 AT4G10550 39.124 708 374 21 1 672 24 710 1.94e-133 409
MsG0880042922.01.T01 AT4G10540 39.266 708 374 20 1 672 76 763 3.30e-133 410
MsG0880042922.01.T01 AT4G10550 39.124 708 374 21 1 672 80 766 8.04e-133 410
MsG0880042922.01.T01 AT4G10550 39.124 708 374 21 1 672 96 782 1.46e-132 409
MsG0880042922.01.T01 AT5G03620 37.941 709 373 17 1 672 80 758 2.78e-131 405
MsG0880042922.01.T01 AT4G10510 37.624 707 385 18 1 672 9 694 4.85e-131 403
MsG0880042922.01.T01 AT4G10510 37.624 707 385 18 1 672 24 709 7.94e-131 403
MsG0880042922.01.T01 AT4G10510 37.624 707 385 18 1 672 68 753 1.64e-130 403
MsG0880042922.01.T01 AT4G10510 37.624 707 385 18 1 672 80 765 2.46e-130 403
MsG0880042922.01.T01 AT1G32940 39.021 715 366 21 1 672 24 711 1.53e-129 399
MsG0880042922.01.T01 AT1G32940 39.021 715 366 21 1 672 24 711 1.53e-129 399
MsG0880042922.01.T01 AT1G32960 38.569 713 372 21 1 672 78 765 5.95e-129 399
MsG0880042922.01.T01 AT5G58840 39.060 681 352 20 1 672 80 706 6.79e-129 397
MsG0880042922.01.T01 AT1G32940 39.021 715 366 21 1 672 75 762 9.78e-129 399
MsG0880042922.01.T01 AT4G10520 37.590 697 383 18 1 672 75 744 1.07e-128 398
MsG0880042922.01.T01 AT5G45650 36.835 733 389 18 1 674 73 790 1.85e-128 399
MsG0880042922.01.T01 AT5G45650 36.835 733 389 18 1 674 73 790 1.85e-128 399
MsG0880042922.01.T01 AT1G66210 38.340 699 370 19 1 672 86 750 9.86e-128 396
MsG0880042922.01.T01 AT4G26330 38.407 703 388 21 3 672 31 721 1.30e-127 395
MsG0880042922.01.T01 AT5G58830 38.978 685 352 19 1 674 78 707 3.91e-126 390
MsG0880042922.01.T01 AT1G20150 36.451 727 378 19 1 672 73 770 7.74e-126 392
MsG0880042922.01.T01 AT4G00230 37.053 699 376 18 1 672 82 743 1.15e-124 387
MsG0880042922.01.T01 AT4G26330 37.657 717 388 22 3 672 31 735 8.59e-124 385
MsG0880042922.01.T01 AT5G59190 37.931 696 359 20 1 671 40 687 1.35e-123 383
MsG0880042922.01.T01 AT5G59090 36.624 699 375 17 1 675 77 731 2.04e-123 384
MsG0880042922.01.T01 AT5G59090 36.481 699 371 17 1 675 77 726 2.26e-123 384
MsG0880042922.01.T01 AT5G59090 36.767 699 372 18 1 675 77 729 1.40e-122 382
MsG0880042922.01.T01 AT5G11940 36.167 694 397 20 1 672 83 752 9.29e-122 380
MsG0880042922.01.T01 AT1G66220 35.022 691 401 16 1 672 83 744 3.74e-121 379
MsG0880042922.01.T01 AT3G46850 36.978 695 377 20 1 672 78 734 4.95e-121 378
MsG0880042922.01.T01 AT5G59120 36.167 694 379 17 1 672 76 727 5.28e-121 377
MsG0880042922.01.T01 AT4G21630 36.286 700 387 20 1 672 85 753 1.65e-120 377
MsG0880042922.01.T01 AT1G32950 38.048 707 383 21 1 672 24 710 2.83e-119 373
MsG0880042922.01.T01 AT3G46840 36.872 697 374 22 1 672 79 734 3.30e-119 373
MsG0880042922.01.T01 AT1G32950 38.048 707 383 21 1 672 75 761 9.28e-119 373
MsG0880042922.01.T01 AT5G59130 36.390 698 366 20 1 672 41 686 1.04e-118 370
MsG0880042922.01.T01 AT5G59130 36.390 698 366 20 1 672 80 725 3.28e-118 370
MsG0880042922.01.T01 AT5G59100 35.162 711 370 18 1 672 79 737 5.59e-118 370
MsG0880042922.01.T01 AT5G59130 36.681 687 369 19 1 672 80 715 3.10e-117 367
MsG0880042922.01.T01 AT4G21323 36.744 694 387 17 1 670 126 791 3.34e-117 370
MsG0880042922.01.T01 AT5G59130 36.246 698 363 21 1 672 80 721 5.16e-116 365
MsG0880042922.01.T01 AT4G21650 35.035 705 394 17 1 672 87 760 9.08e-116 365
MsG0880042922.01.T01 AT4G10530 35.286 700 386 17 1 672 75 735 1.54e-115 363
MsG0880042922.01.T01 AT5G58820 37.555 679 365 18 1 672 74 700 6.26e-115 361
MsG0880042922.01.T01 AT4G21640 35.765 699 364 21 1 672 87 727 1.70e-114 360
MsG0880042922.01.T01 AT4G21326 36.192 688 403 13 1 674 24 689 3.21e-113 356
MsG0880042922.01.T01 AT5G45640 34.225 748 388 22 1 675 38 754 2.62e-108 345
MsG0880042922.01.T01 AT4G15040 35.065 693 381 16 1 672 41 685 2.60e-107 340
MsG0880042922.01.T01 AT4G15040 35.065 693 381 16 1 672 41 685 2.60e-107 340
MsG0880042922.01.T01 AT1G32970 38.947 570 302 14 130 672 172 722 3.83e-101 325
MsG0880042922.01.T01 AT2G19170 34.320 743 390 28 1 671 93 809 1.27e-99 323
MsG0880042922.01.T01 AT2G19170 34.320 743 390 28 1 671 93 809 1.27e-99 323
MsG0880042922.01.T01 AT4G30020 34.413 741 393 26 1 671 93 810 1.39e-99 323
MsG0880042922.01.T01 AT4G30020 34.413 741 393 26 1 671 93 810 1.39e-99 323
MsG0880042922.01.T01 AT4G30020 34.413 741 393 26 1 671 93 810 1.39e-99 323
MsG0880042922.01.T01 AT4G30020 34.413 741 393 26 1 671 93 810 1.39e-99 323
MsG0880042922.01.T01 AT5G58840 40.486 494 247 14 1 489 80 531 1.66e-98 313
MsG0880042922.01.T01 AT5G03620 40.388 515 266 11 1 491 80 577 8.51e-98 312
MsG0880042922.01.T01 AT2G39850 32.875 727 395 26 3 672 75 765 1.12e-97 317
MsG0880042922.01.T01 AT1G32940 39.817 545 270 17 1 505 75 601 7.69e-97 311
MsG0880042922.01.T01 AT1G30600 32.483 745 407 25 1 672 105 826 2.11e-92 305
MsG0880042922.01.T01 AT4G20430 33.197 732 400 27 1 674 126 826 6.78e-91 301
MsG0880042922.01.T01 AT4G00230 38.791 513 268 13 1 491 82 570 7.97e-91 295
MsG0880042922.01.T01 AT5G44530 33.108 740 408 26 1 672 113 833 1.28e-90 300
MsG0880042922.01.T01 AT4G20430 32.176 749 409 27 1 674 126 850 1.10e-89 298
MsG0880042922.01.T01 AT4G20430 32.176 749 409 27 1 674 126 850 1.10e-89 298
MsG0880042922.01.T01 AT1G62340 32.361 754 399 27 1 672 105 829 7.39e-88 293
MsG0880042922.01.T01 AT5G44530 32.288 765 406 27 1 672 113 858 1.12e-86 290
MsG0880042922.01.T01 AT1G20160 38.702 447 232 11 1 418 75 508 1.08e-81 269
MsG0880042922.01.T01 AT5G58840 37.678 422 218 12 1 418 80 460 3.11e-69 234
MsG0880042922.01.T01 AT5G44530 33.673 490 262 16 1 432 113 597 4.17e-58 207
MsG0880042922.01.T01 AT1G32980 45.550 191 94 4 454 641 3 186 4.41e-39 143
MsG0880042922.01.T01 AT5G59110 35.976 164 97 4 516 674 8 168 6.23e-20 88.2

Find 143 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGGTTATATTTGGATATT+TGG 0.094856 8:-16026696 None:intergenic
CAATCCTTTGTTGAAGAATT+TGG 0.102221 8:-16026669 None:intergenic
GCTTGGCATGATTCGAATTT+TGG 0.126643 8:+16026488 MsG0880042922.01.T01:CDS
TCTTTAAAGCTTTCGCTTTC+GGG 0.144438 8:-16026551 None:intergenic
TTCAAACCTAAGGTTATATT+TGG 0.151338 8:-16026704 None:intergenic
GAAAACAATTGGAACATTAT+TGG 0.203286 8:-16027209 None:intergenic
AACTGTGGCTGCTGGAACTA+TGG 0.205089 8:+16027105 MsG0880042922.01.T01:CDS
ATCTTTAAAGCTTTCGCTTT+CGG 0.224788 8:-16026552 None:intergenic
TGATTGCTCTGAACCTTCTT+TGG 0.224917 8:+16028026 MsG0880042922.01.T01:CDS
TTTATTGCATATTTCAATAA+TGG 0.246626 8:+16028066 MsG0880042922.01.T01:CDS
CCAGGGTCAAGTGCTCTATT+TGG 0.248129 8:-16027904 None:intergenic
TTGAGGGATTCATGTTCTTT+TGG 0.272557 8:-16026368 None:intergenic
TGTCCGAAATTCCTTCAAAA+TGG 0.279269 8:+16026582 MsG0880042922.01.T01:CDS
GTTTAATCGACACCGGAATT+TGG 0.289102 8:+16026528 MsG0880042922.01.T01:CDS
AAAATGAAGAAAGTGGCTTT+TGG 0.302465 8:+16028282 MsG0880042922.01.T01:CDS
TAGCAATGTATAAAGCAATA+TGG 0.305959 8:+16026855 MsG0880042922.01.T01:CDS
TTGGATGAAGCAAAAGTTCT+TGG 0.316962 8:+16027334 MsG0880042922.01.T01:CDS
TATGCACCTGGAACAGCTTC+AGG 0.327934 8:+16026812 MsG0880042922.01.T01:CDS
TTGACTGCTTCTCCATTGAT+TGG 0.328555 8:-16027427 None:intergenic
TTCGCTTTCGGGCCAAATTC+CGG 0.333659 8:-16026540 None:intergenic
TCAGTGAATACCAACTTGTT+TGG 0.336055 8:-16028207 None:intergenic
ACATTTGCAGCTATGGAAAA+AGG 0.339315 8:+16027007 MsG0880042922.01.T01:CDS
CAGTGAATACCAACTTGTTT+GGG 0.345539 8:-16028206 None:intergenic
AAATGTTCCTGTGATGGATT+TGG 0.347365 8:+16027642 MsG0880042922.01.T01:CDS
TTTGATAAGTGGAACATCTA+TGG 0.353717 8:+16027693 MsG0880042922.01.T01:CDS
GCTATTCCTGAAGCTGTTCC+AGG 0.354864 8:-16026818 None:intergenic
TGAAAGGAGCACACGGTGAT+TGG 0.356416 8:+16027749 MsG0880042922.01.T01:CDS
TGTTACCATTTCCAAGTGTA+AGG 0.357177 8:-16027147 None:intergenic
AATGTTCCTGTGATGGATTT+GGG 0.372980 8:+16027643 MsG0880042922.01.T01:CDS
TAACTGTTCTATGAAATTCT+TGG 0.374058 8:-16028110 None:intergenic
ATGGGGTTGTCACTTTATAT+AGG 0.376143 8:+16027175 MsG0880042922.01.T01:CDS
CATAAACCCATGAAAACAAT+TGG 0.378794 8:-16027220 None:intergenic
TGGATGAAGCAAAAGTTCTT+GGG 0.380155 8:+16027335 MsG0880042922.01.T01:CDS
ATAATGGAAATTCTTCTTCA+AGG 0.380641 8:+16028082 MsG0880042922.01.T01:CDS
GATGTTCTTTCACTATCATT+TGG 0.382722 8:+16026941 MsG0880042922.01.T01:CDS
TCCACTTCAGCTGGTAATAG+TGG 0.387246 8:+16027040 MsG0880042922.01.T01:CDS
AACAAGTTCAATTTGATAAG+TGG 0.388291 8:+16027682 MsG0880042922.01.T01:CDS
ATGGCATGTCCTCATGTTGC+AGG 0.395406 8:+16027712 MsG0880042922.01.T01:CDS
AACTGTTCTATGAAATTCTT+GGG 0.410693 8:-16028109 None:intergenic
GCAAATGTTGCTATGGCAAC+AGG 0.411672 8:-16026992 None:intergenic
AAATATCCAAATATAACCTT+AGG 0.419204 8:+16026698 MsG0880042922.01.T01:CDS
CTTTGCAACAAGAAACTCAT+TGG 0.420955 8:+16026644 MsG0880042922.01.T01:CDS
TTGAAATATGCAATAAAAGA+AGG 0.421126 8:-16028060 None:intergenic
TCGAGTATTGCGACCACGAT+TGG 0.427269 8:-16028345 None:intergenic
GGGTTTATGTGACAATGTTA+AGG 0.427670 8:+16027234 MsG0880042922.01.T01:CDS
AAGCGCCTTTGTTGGGATTG+AGG 0.428372 8:-16026469 None:intergenic
TCTAGCATTACTCAGGTTGA+AGG 0.431224 8:+16028165 MsG0880042922.01.T01:CDS
ATTGGAGCCCTGCCGCGATT+CGG 0.433464 8:+16027767 MsG0880042922.01.T01:CDS
ATGTCAGGTTTCAAAACATA+TGG 0.439469 8:-16027580 None:intergenic
TCATGCCAAGCGCCTTTGTT+GGG 0.441963 8:-16026476 None:intergenic
CATAGCAACATTTGCAGCTA+TGG 0.447886 8:+16027000 MsG0880042922.01.T01:CDS
ATCATTGTTGATCCAATCAA+TGG 0.454770 8:+16027415 MsG0880042922.01.T01:CDS
CTTTGTTGGGATTGAGGCCG+AGG 0.459177 8:-16026463 None:intergenic
CATAGAACAGTTACCAATGT+TGG 0.459195 8:+16028120 MsG0880042922.01.T01:CDS
TATAAAGCAATATGGGATGT+TGG 0.463605 8:+16026863 MsG0880042922.01.T01:CDS
ACCTACACACATGTCATGAA+TGG 0.466745 8:+16026326 None:intergenic
AGCAATGTATAAAGCAATAT+GGG 0.472723 8:+16026856 MsG0880042922.01.T01:CDS
CACACTTCATCAACAGCAGC+TGG 0.475543 8:+16026758 MsG0880042922.01.T01:CDS
ATCATGCCAAGCGCCTTTGT+TGG 0.477860 8:-16026477 None:intergenic
TGGAAATGGTAACACAATCA+TGG 0.479561 8:+16027156 MsG0880042922.01.T01:CDS
GTACCAGGAGCAGTGATGTC+AGG 0.480347 8:-16027595 None:intergenic
GGAAATGGTAACACAATCAT+GGG 0.480569 8:+16027157 MsG0880042922.01.T01:CDS
ATTGCCGACCGAATCGCGGC+AGG 0.480666 8:-16027775 None:intergenic
TTTGGCAACGACGTAATTGT+TGG 0.482755 8:+16026506 MsG0880042922.01.T01:CDS
GGGACCCTTACACTTGGAAA+TGG 0.492845 8:+16027142 MsG0880042922.01.T01:CDS
CCTGGTCTTATTTACGATGT+TGG 0.495175 8:+16027922 MsG0880042922.01.T01:CDS
TGGGTCATAACTGTGGCTGC+TGG 0.500125 8:+16027097 MsG0880042922.01.T01:CDS
GGTGCCAAATTCTTCAACAA+AGG 0.500831 8:+16026665 MsG0880042922.01.T01:CDS
TCCATCACAGGAACATTTGT+GGG 0.503984 8:-16027637 None:intergenic
TTCCATTGTGAAGAGTTTCA+AGG 0.507598 8:-16027069 None:intergenic
TGACCAGCTCCCAATGCAAA+AGG 0.509119 8:-16027874 None:intergenic
CATAGCTGCAAATGTTGCTA+TGG 0.514328 8:-16026999 None:intergenic
TTGTGAAGAGTTTCAAGGGC+AGG 0.514726 8:-16027064 None:intergenic
ATCCATCACAGGAACATTTG+TGG 0.515639 8:-16027638 None:intergenic
AAACCTGACATCACTGCTCC+TGG 0.518027 8:+16027592 MsG0880042922.01.T01:CDS
AAGGAGCATATTAAAGACAT+TGG 0.525407 8:+16027829 MsG0880042922.01.T01:CDS
TGTTTCTCCCTCACCAACAT+TGG 0.525851 8:-16028133 None:intergenic
ACCACTATTACCAGCTGAAG+TGG 0.526396 8:-16027041 None:intergenic
TGAAATATGCAATAAAAGAA+GGG 0.526670 8:-16028059 None:intergenic
TCTTCACAATGGAACACCTT+GGG 0.527475 8:+16027078 MsG0880042922.01.T01:CDS
ACATATGGACAGCTATTTGA+AGG 0.529731 8:-16027565 None:intergenic
ATTGATTGGATCAACAATGA+TGG 0.534175 8:-16027413 None:intergenic
GAAATTCCTTCAAAATGGAA+TGG 0.534493 8:+16026587 MsG0880042922.01.T01:CDS
TTATGTTTCTAGCATTACTC+AGG 0.537982 8:+16028158 MsG0880042922.01.T01:CDS
CAGTGTTATCCCAAACAAGT+TGG 0.541444 8:+16028197 MsG0880042922.01.T01:CDS
TGATATTGCCGCGTCAATTG+CGG 0.543360 8:-16026909 None:intergenic
GGACATATTTGATAATACTA+AGG 0.543524 8:+16027810 MsG0880042922.01.T01:CDS
ACACATTCACCTCAGTTCCT+CGG 0.547201 8:+16026446 MsG0880042922.01.T01:CDS
TAAGAAGAAACACTAGGTGC+TGG 0.550269 8:-16027529 None:intergenic
CTAGCATTACTCAGGTTGAA+GGG 0.551958 8:+16028166 MsG0880042922.01.T01:CDS
TCAATCCCAACAAAGGCGCT+TGG 0.553508 8:+16026471 MsG0880042922.01.T01:CDS
TTTCAAGGGACCCTTACACT+TGG 0.555185 8:+16027136 MsG0880042922.01.T01:CDS
GAGCCCTGCCGCGATTCGGT+CGG 0.560337 8:+16027771 MsG0880042922.01.T01:CDS
TCCTCATGTTGCAGGTGTCG+CGG 0.564392 8:+16027720 MsG0880042922.01.T01:CDS
CTCGTGATTCACATGGCCAT+GGG 0.564511 8:+16026732 MsG0880042922.01.T01:CDS
ACTCGTGATTCACATGGCCA+TGG 0.564850 8:+16026731 MsG0880042922.01.T01:CDS
AGAAACTAAGCTACAAGTTG+AGG 0.565728 8:+16028238 MsG0880042922.01.T01:CDS
CTCTTCACAATGGAACACCT+TGG 0.570530 8:+16027077 MsG0880042922.01.T01:CDS
GGATGAAGCAAAAGTTCTTG+GGG 0.570976 8:+16027336 MsG0880042922.01.T01:CDS
AACAGTTACCAATGTTGGTG+AGG 0.572151 8:+16028125 MsG0880042922.01.T01:CDS
CCAACATCGTAAATAAGACC+AGG 0.572452 8:-16027922 None:intergenic
TCCATTGTGAAGAGTTTCAA+GGG 0.573601 8:-16027068 None:intergenic
GTTTCTTCTTATAGTTCAAG+AGG 0.574131 8:+16027541 MsG0880042922.01.T01:CDS
ACGAGTGGAGTTCAAACCTA+AGG 0.579022 8:-16026714 None:intergenic
GTTACCATTTCCAAGTGTAA+GGG 0.582166 8:-16027146 None:intergenic
TTTATGGATGAAATGTAGCC+TGG 0.585879 8:-16026398 None:intergenic
GGGTAGTTAAGATCCAAAGA+AGG 0.586445 8:-16028039 None:intergenic
GCCCACAAATGTTCCTGTGA+TGG 0.589065 8:+16027636 MsG0880042922.01.T01:CDS
TGATTCCCCAAATCCATCAC+AGG 0.589870 8:-16027649 None:intergenic
TTGCCGACCGAATCGCGGCA+GGG 0.595732 8:-16027774 None:intergenic
ATTGTTGGTTTAATCGACAC+CGG 0.596647 8:+16026521 MsG0880042922.01.T01:CDS
ACAGTTACCAATGTTGGTGA+GGG 0.598993 8:+16028126 MsG0880042922.01.T01:CDS
GTACAAATATCTTAGCTGCA+TGG 0.601561 8:+16027614 MsG0880042922.01.T01:CDS
ACTATGGATAGAGAATTTCA+AGG 0.601837 8:+16027121 MsG0880042922.01.T01:CDS
TTTCTTCTTATAGTTCAAGA+GGG 0.602199 8:+16027542 MsG0880042922.01.T01:CDS
GAATCCCTCAAAACTTCACC+AGG 0.602547 8:+16026380 MsG0880042922.01.T01:CDS
AACTCCACTCGTGATTCACA+TGG 0.603671 8:+16026725 MsG0880042922.01.T01:CDS
CCAAATAGAGCACTTGACCC+TGG 0.619594 8:+16027904 MsG0880042922.01.T01:CDS
GCCGCGACACCTGCAACATG+AGG 0.619878 8:-16027721 None:intergenic
GGATTGAGGCCGAGGAACTG+AGG 0.622508 8:-16026455 None:intergenic
CTCGGCCTCAATCCCAACAA+AGG 0.622891 8:+16026464 MsG0880042922.01.T01:CDS
TGTAATAGCCGCAATTGACG+CGG 0.623466 8:+16026901 MsG0880042922.01.T01:CDS
GATTGTTGTGTGTGAAGACA+AGG 0.634590 8:+16027279 MsG0880042922.01.T01:CDS
GCCCTTGAAACTCTTCACAA+TGG 0.635593 8:+16027067 MsG0880042922.01.T01:CDS
CTATGGATAGAGAATTTCAA+GGG 0.637555 8:+16027122 MsG0880042922.01.T01:CDS
GCAGCCACAGTTATGACCCA+AGG 0.638203 8:-16027094 None:intergenic
ATTCGAAGAAGATCTTGTGA+TGG 0.644214 8:-16028004 None:intergenic
CATAATTGCCGACCGAATCG+CGG 0.646114 8:-16027779 None:intergenic
GCAGCTAAGATATTTGTACC+AGG 0.652313 8:-16027610 None:intergenic
ATGTTCCTGTGATGGATTTG+GGG 0.657697 8:+16027644 MsG0880042922.01.T01:CDS
ATGGCCATGTGAATCACGAG+TGG 0.658008 8:-16026729 None:intergenic
GAACTATAAGAAGAAACACT+AGG 0.659947 8:-16027535 None:intergenic
TGTTTGGGATAACACTGACA+CGG 0.670435 8:-16028191 None:intergenic
TTGATGAAGTGTGAGTCCCA+TGG 0.671770 8:-16026748 None:intergenic
GCAACAGGATCGTCATACAA+AGG 0.684200 8:-16026977 None:intergenic
ATTGACGCGGCAATATCAGA+CGG 0.693866 8:+16026914 MsG0880042922.01.T01:CDS
TGTGGTTAGAAGTCCAATCG+TGG 0.714853 8:+16028332 MsG0880042922.01.T01:CDS
GTCGGCAATTATGACAACGT+CGG 0.719253 8:+16027789 MsG0880042922.01.T01:CDS
AACACCTTGGGTCATAACTG+TGG 0.724927 8:+16027090 MsG0880042922.01.T01:CDS
CAACATCGTAAATAAGACCA+GGG 0.729565 8:-16027921 None:intergenic
TTGGATGGATATGAAGCATG+TGG 0.729881 8:+16028314 MsG0880042922.01.T01:CDS
GAAATGGTAACACAATCATG+GGG 0.745022 8:+16027158 MsG0880042922.01.T01:CDS
GTTGTGTGTGAAGACAAGGA+TGG 0.768733 8:+16027283 MsG0880042922.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTGCATATTTCAATAA+TGG + Chr8:16028066-16028085 MsG0880042922.01.T01:CDS 15.0%
!! AAATATCCAAATATAACCTT+AGG + Chr8:16026698-16026717 MsG0880042922.01.T01:CDS 20.0%
!! TAAGGTTATATTTGGATATT+TGG - Chr8:16026699-16026718 None:intergenic 20.0%
!! TGAAATATGCAATAAAAGAA+GGG - Chr8:16028062-16028081 None:intergenic 20.0%
!! TTGAAATATGCAATAAAAGA+AGG - Chr8:16028063-16028082 None:intergenic 20.0%
!!! AATTATCGACTTGATAAAAA+AGG - Chr8:16027315-16027334 None:intergenic 20.0%
!!! TTTTTATCAAGTCGATAATT+TGG + Chr8:16027315-16027334 MsG0880042922.01.T01:CDS 20.0%
! AACAAGTTCAATTTGATAAG+TGG + Chr8:16027682-16027701 MsG0880042922.01.T01:CDS 25.0%
! AACTGTTCTATGAAATTCTT+GGG - Chr8:16028112-16028131 None:intergenic 25.0%
! AGCAATGTATAAAGCAATAT+GGG + Chr8:16026856-16026875 MsG0880042922.01.T01:CDS 25.0%
! GAAAACAATTGGAACATTAT+TGG - Chr8:16027212-16027231 None:intergenic 25.0%
! TAACTGTTCTATGAAATTCT+TGG - Chr8:16028113-16028132 None:intergenic 25.0%
! TAGCAATGTATAAAGCAATA+TGG + Chr8:16026855-16026874 MsG0880042922.01.T01:CDS 25.0%
! TTCAAACCTAAGGTTATATT+TGG - Chr8:16026707-16026726 None:intergenic 25.0%
! TTTCTTCTTATAGTTCAAGA+GGG + Chr8:16027542-16027561 MsG0880042922.01.T01:CDS 25.0%
!! AATGTTCCAATTGTTTTCAT+GGG + Chr8:16027214-16027233 MsG0880042922.01.T01:CDS 25.0%
!! ATAATGGAAATTCTTCTTCA+AGG + Chr8:16028082-16028101 MsG0880042922.01.T01:CDS 25.0%
!! GGACATATTTGATAATACTA+AGG + Chr8:16027810-16027829 MsG0880042922.01.T01:CDS 25.0%
!! TAATGTTCCAATTGTTTTCA+TGG + Chr8:16027213-16027232 MsG0880042922.01.T01:CDS 25.0%
!! TCTTTCATGAAAACAGTTTT+TGG + Chr8:16027499-16027518 MsG0880042922.01.T01:CDS 25.0%
!! TTTCATGTGTGAATCTTTTA+TGG - Chr8:16026417-16026436 None:intergenic 25.0%
!!! ATTCCATTTTGAAGGAATTT+CGG - Chr8:16026588-16026607 None:intergenic 25.0%
AACGACAAAAATGAAGAAAG+TGG + Chr8:16028275-16028294 MsG0880042922.01.T01:CDS 30.0%
ACTATGGATAGAGAATTTCA+AGG + Chr8:16027121-16027140 MsG0880042922.01.T01:CDS 30.0%
ATCATTGTTGATCCAATCAA+TGG + Chr8:16027415-16027434 MsG0880042922.01.T01:CDS 30.0%
ATGTCAGGTTTCAAAACATA+TGG - Chr8:16027583-16027602 None:intergenic 30.0%
ATTGATTGGATCAACAATGA+TGG - Chr8:16027416-16027435 None:intergenic 30.0%
CAATCCTTTGTTGAAGAATT+TGG - Chr8:16026672-16026691 None:intergenic 30.0%
CATAAACCCATGAAAACAAT+TGG - Chr8:16027223-16027242 None:intergenic 30.0%
CTATGGATAGAGAATTTCAA+GGG + Chr8:16027122-16027141 MsG0880042922.01.T01:CDS 30.0%
GAAATTCCTTCAAAATGGAA+TGG + Chr8:16026587-16026606 MsG0880042922.01.T01:CDS 30.0%
GAACTATAAGAAGAAACACT+AGG - Chr8:16027538-16027557 None:intergenic 30.0%
GATGTTCTTTCACTATCATT+TGG + Chr8:16026941-16026960 MsG0880042922.01.T01:CDS 30.0%
GTTTCTTCTTATAGTTCAAG+AGG + Chr8:16027541-16027560 MsG0880042922.01.T01:CDS 30.0%
TATAAAGCAATATGGGATGT+TGG + Chr8:16026863-16026882 MsG0880042922.01.T01:CDS 30.0%
TTTGATAAGTGGAACATCTA+TGG + Chr8:16027693-16027712 MsG0880042922.01.T01:CDS 30.0%
! AAAATGAAGAAAGTGGCTTT+TGG + Chr8:16028282-16028301 MsG0880042922.01.T01:CDS 30.0%
! AAATGAAGAAAGTGGCTTTT+GGG + Chr8:16028283-16028302 MsG0880042922.01.T01:CDS 30.0%
! AAGGAGCATATTAAAGACAT+TGG + Chr8:16027829-16027848 MsG0880042922.01.T01:CDS 30.0%
!! ATCTTTAAAGCTTTCGCTTT+CGG - Chr8:16026555-16026574 None:intergenic 30.0%
!! TTATGTTTCTAGCATTACTC+AGG + Chr8:16028158-16028177 MsG0880042922.01.T01:CDS 30.0%
!!! GTTGATGATGCTTCATTTTT+TGG + Chr8:16026788-16026807 MsG0880042922.01.T01:CDS 30.0%
ACATATGGACAGCTATTTGA+AGG - Chr8:16027568-16027587 None:intergenic 35.0%
ACATTTGCAGCTATGGAAAA+AGG + Chr8:16027007-16027026 MsG0880042922.01.T01:CDS 35.0%
AGAAACTAAGCTACAAGTTG+AGG + Chr8:16028238-16028257 MsG0880042922.01.T01:CDS 35.0%
ATTCGAAGAAGATCTTGTGA+TGG - Chr8:16028007-16028026 None:intergenic 35.0%
CAACATCGTAAATAAGACCA+GGG - Chr8:16027924-16027943 None:intergenic 35.0%
CATAGAACAGTTACCAATGT+TGG + Chr8:16028120-16028139 MsG0880042922.01.T01:CDS 35.0%
CTTTGCAACAAGAAACTCAT+TGG + Chr8:16026644-16026663 MsG0880042922.01.T01:CDS 35.0%
GAAATGGTAACACAATCATG+GGG + Chr8:16027158-16027177 MsG0880042922.01.T01:CDS 35.0%
GGAAATGGTAACACAATCAT+GGG + Chr8:16027157-16027176 MsG0880042922.01.T01:CDS 35.0%
GGGTTTATGTGACAATGTTA+AGG + Chr8:16027234-16027253 MsG0880042922.01.T01:CDS 35.0%
GTACAAATATCTTAGCTGCA+TGG + Chr8:16027614-16027633 MsG0880042922.01.T01:CDS 35.0%
GTTACCATTTCCAAGTGTAA+GGG - Chr8:16027149-16027168 None:intergenic 35.0%
TCCATTGTGAAGAGTTTCAA+GGG - Chr8:16027071-16027090 None:intergenic 35.0%
TGGAAATGGTAACACAATCA+TGG + Chr8:16027156-16027175 MsG0880042922.01.T01:CDS 35.0%
TGGATGAAGCAAAAGTTCTT+GGG + Chr8:16027335-16027354 MsG0880042922.01.T01:CDS 35.0%
TGTCCGAAATTCCTTCAAAA+TGG + Chr8:16026582-16026601 MsG0880042922.01.T01:CDS 35.0%
TGTTACCATTTCCAAGTGTA+AGG - Chr8:16027150-16027169 None:intergenic 35.0%
TTCCATTGTGAAGAGTTTCA+AGG - Chr8:16027072-16027091 None:intergenic 35.0%
TTGGATGAAGCAAAAGTTCT+TGG + Chr8:16027334-16027353 MsG0880042922.01.T01:CDS 35.0%
TTTATGGATGAAATGTAGCC+TGG - Chr8:16026401-16026420 None:intergenic 35.0%
! CAGTGAATACCAACTTGTTT+GGG - Chr8:16028209-16028228 None:intergenic 35.0%
! TCAGTGAATACCAACTTGTT+TGG - Chr8:16028210-16028229 None:intergenic 35.0%
! TTGAGGGATTCATGTTCTTT+TGG - Chr8:16026371-16026390 None:intergenic 35.0%
!! AAATGTTCCTGTGATGGATT+TGG + Chr8:16027642-16027661 MsG0880042922.01.T01:CDS 35.0%
!! AATGTTCCTGTGATGGATTT+GGG + Chr8:16027643-16027662 MsG0880042922.01.T01:CDS 35.0%
!! ATGGGGTTGTCACTTTATAT+AGG + Chr8:16027175-16027194 MsG0880042922.01.T01:CDS 35.0%
!! ATTGTTGGTTTAATCGACAC+CGG + Chr8:16026521-16026540 MsG0880042922.01.T01:CDS 35.0%
!! TCTTTAAAGCTTTCGCTTTC+GGG - Chr8:16026554-16026573 None:intergenic 35.0%
!! TTTTGGGTATCTAACTTGGA+TGG + Chr8:16028299-16028318 MsG0880042922.01.T01:CDS 35.0%
!!! TCATTTTTTGGTTATGCACC+TGG + Chr8:16026800-16026819 MsG0880042922.01.T01:CDS 35.0%
AACAGTTACCAATGTTGGTG+AGG + Chr8:16028125-16028144 MsG0880042922.01.T01:CDS 40.0%
ATCCATCACAGGAACATTTG+TGG - Chr8:16027641-16027660 None:intergenic 40.0%
CAGTGTTATCCCAAACAAGT+TGG + Chr8:16028197-16028216 MsG0880042922.01.T01:CDS 40.0%
CATAGCAACATTTGCAGCTA+TGG + Chr8:16027000-16027019 MsG0880042922.01.T01:CDS 40.0%
CATAGCTGCAAATGTTGCTA+TGG - Chr8:16027002-16027021 None:intergenic 40.0%
CCAACATCGTAAATAAGACC+AGG - Chr8:16027925-16027944 None:intergenic 40.0%
GATTGTTGTGTGTGAAGACA+AGG + Chr8:16027279-16027298 MsG0880042922.01.T01:CDS 40.0%
GCAGCTAAGATATTTGTACC+AGG - Chr8:16027613-16027632 None:intergenic 40.0%
GGATGAAGCAAAAGTTCTTG+GGG + Chr8:16027336-16027355 MsG0880042922.01.T01:CDS 40.0%
GGGTAGTTAAGATCCAAAGA+AGG - Chr8:16028042-16028061 None:intergenic 40.0%
GGTGCCAAATTCTTCAACAA+AGG + Chr8:16026665-16026684 MsG0880042922.01.T01:CDS 40.0%
GTTTAATCGACACCGGAATT+TGG + Chr8:16026528-16026547 MsG0880042922.01.T01:CDS 40.0%
TAAGAAGAAACACTAGGTGC+TGG - Chr8:16027532-16027551 None:intergenic 40.0%
TCCATCACAGGAACATTTGT+GGG - Chr8:16027640-16027659 None:intergenic 40.0%
TCTTCACAATGGAACACCTT+GGG + Chr8:16027078-16027097 MsG0880042922.01.T01:CDS 40.0%
TTGACTGCTTCTCCATTGAT+TGG - Chr8:16027430-16027449 None:intergenic 40.0%
TTGGATGGATATGAAGCATG+TGG + Chr8:16028314-16028333 MsG0880042922.01.T01:CDS 40.0%
TTTGGCAACGACGTAATTGT+TGG + Chr8:16026506-16026525 MsG0880042922.01.T01:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG + Chr8:16028126-16028145 MsG0880042922.01.T01:CDS 40.0%
! CACTGTCCATTCCATTTTGA+AGG - Chr8:16026596-16026615 None:intergenic 40.0%
! GCTTGGCATGATTCGAATTT+TGG + Chr8:16026488-16026507 MsG0880042922.01.T01:CDS 40.0%
! TGATTGCTCTGAACCTTCTT+TGG + Chr8:16028026-16028045 MsG0880042922.01.T01:CDS 40.0%
! TGTTTGGGATAACACTGACA+CGG - Chr8:16028194-16028213 None:intergenic 40.0%
!! ATGTTCCTGTGATGGATTTG+GGG + Chr8:16027644-16027663 MsG0880042922.01.T01:CDS 40.0%
!! CCTGGTCTTATTTACGATGT+TGG + Chr8:16027922-16027941 MsG0880042922.01.T01:CDS 40.0%
!! CTAGCATTACTCAGGTTGAA+GGG + Chr8:16028166-16028185 MsG0880042922.01.T01:CDS 40.0%
!! GTTTTTGTTTCCACTTCAGC+TGG + Chr8:16027031-16027050 MsG0880042922.01.T01:CDS 40.0%
!! TCTAGCATTACTCAGGTTGA+AGG + Chr8:16028165-16028184 MsG0880042922.01.T01:CDS 40.0%
!! TGGCTTTTGGGTATCTAACT+TGG + Chr8:16028295-16028314 MsG0880042922.01.T01:CDS 40.0%
AACACCTTGGGTCATAACTG+TGG + Chr8:16027090-16027109 MsG0880042922.01.T01:CDS 45.0%
AACTCCACTCGTGATTCACA+TGG + Chr8:16026725-16026744 MsG0880042922.01.T01:CDS 45.0%
ACACATTCACCTCAGTTCCT+CGG + Chr8:16026446-16026465 MsG0880042922.01.T01:CDS 45.0%
ACCACTATTACCAGCTGAAG+TGG - Chr8:16027044-16027063 None:intergenic 45.0%
ACGAGTGGAGTTCAAACCTA+AGG - Chr8:16026717-16026736 None:intergenic 45.0%
ATTGACGCGGCAATATCAGA+CGG + Chr8:16026914-16026933 MsG0880042922.01.T01:CDS 45.0%
CTCTTCACAATGGAACACCT+TGG + Chr8:16027077-16027096 MsG0880042922.01.T01:CDS 45.0%
GAATCCCTCAAAACTTCACC+AGG + Chr8:16026380-16026399 MsG0880042922.01.T01:CDS 45.0%
GCAAATGTTGCTATGGCAAC+AGG - Chr8:16026995-16027014 None:intergenic 45.0%
GCAACAGGATCGTCATACAA+AGG - Chr8:16026980-16026999 None:intergenic 45.0%
GCCCTTGAAACTCTTCACAA+TGG + Chr8:16027067-16027086 MsG0880042922.01.T01:CDS 45.0%
GTCGGCAATTATGACAACGT+CGG + Chr8:16027789-16027808 MsG0880042922.01.T01:CDS 45.0%
GTTGTGTGTGAAGACAAGGA+TGG + Chr8:16027283-16027302 MsG0880042922.01.T01:CDS 45.0%
TCCACTTCAGCTGGTAATAG+TGG + Chr8:16027040-16027059 MsG0880042922.01.T01:CDS 45.0%
TGATATTGCCGCGTCAATTG+CGG - Chr8:16026912-16026931 None:intergenic 45.0%
TGATTCCCCAAATCCATCAC+AGG - Chr8:16027652-16027671 None:intergenic 45.0%
TGTAATAGCCGCAATTGACG+CGG + Chr8:16026901-16026920 MsG0880042922.01.T01:CDS 45.0%
TGTGGTTAGAAGTCCAATCG+TGG + Chr8:16028332-16028351 MsG0880042922.01.T01:CDS 45.0%
TGTTTCTCCCTCACCAACAT+TGG - Chr8:16028136-16028155 None:intergenic 45.0%
TTGATGAAGTGTGAGTCCCA+TGG - Chr8:16026751-16026770 None:intergenic 45.0%
TTGTGAAGAGTTTCAAGGGC+AGG - Chr8:16027067-16027086 None:intergenic 45.0%
TTTCAAGGGACCCTTACACT+TGG + Chr8:16027136-16027155 MsG0880042922.01.T01:CDS 45.0%
! AGCAGCAACTCCTTTTGCAT+TGG + Chr8:16027864-16027883 MsG0880042922.01.T01:CDS 45.0%
! GCAGCAACTCCTTTTGCATT+GGG + Chr8:16027865-16027884 MsG0880042922.01.T01:CDS 45.0%
! TGTAGCCTGGTGAAGTTTTG+AGG - Chr8:16026388-16026407 None:intergenic 45.0%
!! GCACTTTTGAAAGGAGCACA+CGG + Chr8:16027742-16027761 MsG0880042922.01.T01:CDS 45.0%
!! GTAGCCTGGTGAAGTTTTGA+GGG - Chr8:16026387-16026406 None:intergenic 45.0%
AAACCTGACATCACTGCTCC+TGG + Chr8:16027592-16027611 MsG0880042922.01.T01:CDS 50.0%
AACTGTGGCTGCTGGAACTA+TGG + Chr8:16027105-16027124 MsG0880042922.01.T01:CDS 50.0%
AAGCGCCTTTGTTGGGATTG+AGG - Chr8:16026472-16026491 None:intergenic 50.0%
ACTCGTGATTCACATGGCCA+TGG + Chr8:16026731-16026750 MsG0880042922.01.T01:CDS 50.0%
ATCATGCCAAGCGCCTTTGT+TGG - Chr8:16026480-16026499 None:intergenic 50.0%
ATGGCATGTCCTCATGTTGC+AGG + Chr8:16027712-16027731 MsG0880042922.01.T01:CDS 50.0%
ATGGCCATGTGAATCACGAG+TGG - Chr8:16026732-16026751 None:intergenic 50.0%
CACACTTCATCAACAGCAGC+TGG + Chr8:16026758-16026777 MsG0880042922.01.T01:CDS 50.0%
CATAATTGCCGACCGAATCG+CGG - Chr8:16027782-16027801 None:intergenic 50.0%
CCAGGGTCAAGTGCTCTATT+TGG - Chr8:16027907-16027926 None:intergenic 50.0%
CTCGTGATTCACATGGCCAT+GGG + Chr8:16026732-16026751 MsG0880042922.01.T01:CDS 50.0%
GCCCACAAATGTTCCTGTGA+TGG + Chr8:16027636-16027655 MsG0880042922.01.T01:CDS 50.0%
GCTATTCCTGAAGCTGTTCC+AGG - Chr8:16026821-16026840 None:intergenic 50.0%
GGGACCCTTACACTTGGAAA+TGG + Chr8:16027142-16027161 MsG0880042922.01.T01:CDS 50.0%
TATGCACCTGGAACAGCTTC+AGG + Chr8:16026812-16026831 MsG0880042922.01.T01:CDS 50.0%
TCATGCCAAGCGCCTTTGTT+GGG - Chr8:16026479-16026498 None:intergenic 50.0%
TGACCAGCTCCCAATGCAAA+AGG - Chr8:16027877-16027896 None:intergenic 50.0%
TTCGCTTTCGGGCCAAATTC+CGG - Chr8:16026543-16026562 None:intergenic 50.0%
! ACTCCTTTTGCATTGGGAGC+TGG + Chr8:16027871-16027890 MsG0880042922.01.T01:CDS 50.0%
! CCAAATAGAGCACTTGACCC+TGG + Chr8:16027904-16027923 MsG0880042922.01.T01:CDS 50.0%
! TCGAGTATTGCGACCACGAT+TGG - Chr8:16028348-16028367 None:intergenic 50.0%
! TGAAAGGAGCACACGGTGAT+TGG + Chr8:16027749-16027768 MsG0880042922.01.T01:CDS 50.0%
!! TCAATCCCAACAAAGGCGCT+TGG + Chr8:16026471-16026490 MsG0880042922.01.T01:CDS 50.0%
CTCGGCCTCAATCCCAACAA+AGG + Chr8:16026464-16026483 MsG0880042922.01.T01:CDS 55.0%
CTTTGTTGGGATTGAGGCCG+AGG - Chr8:16026466-16026485 None:intergenic 55.0%
GCAGCCACAGTTATGACCCA+AGG - Chr8:16027097-16027116 None:intergenic 55.0%
GTACCAGGAGCAGTGATGTC+AGG - Chr8:16027598-16027617 None:intergenic 55.0%
TGGGTCATAACTGTGGCTGC+TGG + Chr8:16027097-16027116 MsG0880042922.01.T01:CDS 55.0%
! TCCTCATGTTGCAGGTGTCG+CGG + Chr8:16027720-16027739 MsG0880042922.01.T01:CDS 55.0%
!! GGTGTCGCGGCACTTTTGAA+AGG + Chr8:16027733-16027752 MsG0880042922.01.T01:CDS 55.0%
ATTGGAGCCCTGCCGCGATT+CGG + Chr8:16027767-16027786 MsG0880042922.01.T01:CDS 60.0%
GGATTGAGGCCGAGGAACTG+AGG - Chr8:16026458-16026477 None:intergenic 60.0%
ATTGCCGACCGAATCGCGGC+AGG - Chr8:16027778-16027797 None:intergenic 65.0%
GCCGCGACACCTGCAACATG+AGG - Chr8:16027724-16027743 None:intergenic 65.0%
TTGCCGACCGAATCGCGGCA+GGG - Chr8:16027777-16027796 None:intergenic 65.0%
!! GAGCCCTGCCGCGATTCGGT+CGG + Chr8:16027771-16027790 MsG0880042922.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 16026341 16028371 16026341 ID=MsG0880042922.01;Name=MsG0880042922.01
Chr8 mRNA 16026341 16028371 16026341 ID=MsG0880042922.01.T01;Parent=MsG0880042922.01;Name=MsG0880042922.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|676
Chr8 exon 16026341 16028371 16026341 ID=MsG0880042922.01.T01:exon:4220;Parent=MsG0880042922.01.T01
Chr8 CDS 16026341 16028371 16026341 ID=MsG0880042922.01.T01:cds;Parent=MsG0880042922.01.T01
Gene Sequence

>MsG0880042922.01.T01

ATGAATGGTTTTAGTGCTAATTTATCACCAAAAGAACATGAATCCCTCAAAACTTCACCAGGCTACATTTCATCCATAAAAGATTCACACATGAAACTCGACACAACACATTCACCTCAGTTCCTCGGCCTCAATCCCAACAAAGGCGCTTGGCATGATTCGAATTTTGGCAACGACGTAATTGTTGGTTTAATCGACACCGGAATTTGGCCCGAAAGCGAAAGCTTTAAAGATAATTTAATGTCCGAAATTCCTTCAAAATGGAATGGACAGTGTGAAAATAGCATTCTTTTCAATTCATCTCTTTGCAACAAGAAACTCATTGGTGCCAAATTCTTCAACAAAGGATTGCGATCCAAATATCCAAATATAACCTTAGGTTTGAACTCCACTCGTGATTCACATGGCCATGGGACTCACACTTCATCAACAGCAGCTGGAAACAGAGTTGATGATGCTTCATTTTTTGGTTATGCACCTGGAACAGCTTCAGGAATAGCTTCAAATTCACGAGTAGCAATGTATAAAGCAATATGGGATGTTGGATTTTTATCATCTGATGTAATAGCCGCAATTGACGCGGCAATATCAGACGGTGTTGATGTTCTTTCACTATCATTTGGTAAAAATGACGTGCCTTTGTATGACGATCCTGTTGCCATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTTGTTTCCACTTCAGCTGGTAATAGTGGTCCTGCCCTTGAAACTCTTCACAATGGAACACCTTGGGTCATAACTGTGGCTGCTGGAACTATGGATAGAGAATTTCAAGGGACCCTTACACTTGGAAATGGTAACACAATCATGGGGTTGTCACTTTATATAGGAACATTTTCTTCCAATAATGTTCCAATTGTTTTCATGGGTTTATGTGACAATGTTAAGGAATTGAAAAAAGTGAAAAACAAGATTGTTGTGTGTGAAGACAAGGATGGAGCAAGCCTTTTTTATCAAGTCGATAATTTGGATGAAGCAAAAGTTCTTGGGGCTGTTTTTATTACAAATGTTACAGACATGTACTATTCAGAAAATAGTTTTGCATCCATCATTGTTGATCCAATCAATGGAGAAGCAGTCAAAGCTTACATCAAGAGTTACTCTAAAAACTCTACTTCAAAAGCAAGCATGTCTTTCATGAAAACAGTTTTTGGAATTAAACCAGCACCTAGTGTTTCTTCTTATAGTTCAAGAGGGCCTTCAAATAGCTGTCCATATGTTTTGAAACCTGACATCACTGCTCCTGGTACAAATATCTTAGCTGCATGGCCCACAAATGTTCCTGTGATGGATTTGGGGAATCATAAGATCTTCAACAAGTTCAATTTGATAAGTGGAACATCTATGGCATGTCCTCATGTTGCAGGTGTCGCGGCACTTTTGAAAGGAGCACACGGTGATTGGAGCCCTGCCGCGATTCGGTCGGCAATTATGACAACGTCGGACATATTTGATAATACTAAGGAGCATATTAAAGACATTGGAAATGATAATAAAGCAGCAACTCCTTTTGCATTGGGAGCTGGTCATGTTAATCCAAATAGAGCACTTGACCCTGGTCTTATTTACGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTACTCACAGAAAAACATCACTGCCATCACAAGATCTTCTTCGAATGATTGCTCTGAACCTTCTTTGGATCTTAACTACCCTTCTTTTATTGCATATTTCAATAATGGAAATTCTTCTTCAAGGACAACCCAAGAATTTCATAGAACAGTTACCAATGTTGGTGAGGGAGAAACAATTTATGTTTCTAGCATTACTCAGGTTGAAGGGTTCCGTGTCAGTGTTATCCCAAACAAGTTGGTATTCACTGAGAAGAATGAGAAACTAAGCTACAAGTTGAGGATTGAAGTTGCAAGAACGACAAAAATGAAGAAAGTGGCTTTTGGGTATCTAACTTGGATGGATATGAAGCATGTGGTTAGAAGTCCAATCGTGGTCGCAATACTCGAATAG

Protein sequence

>MsG0880042922.01.T01

MNGFSANLSPKEHESLKTSPGYISSIKDSHMKLDTTHSPQFLGLNPNKGAWHDSNFGNDVIVGLIDTGIWPESESFKDNLMSEIPSKWNGQCENSILFNSSLCNKKLIGAKFFNKGLRSKYPNITLGLNSTRDSHGHGTHTSSTAAGNRVDDASFFGYAPGTASGIASNSRVAMYKAIWDVGFLSSDVIAAIDAAISDGVDVLSLSFGKNDVPLYDDPVAIATFAAMEKGVFVSTSAGNSGPALETLHNGTPWVITVAAGTMDREFQGTLTLGNGNTIMGLSLYIGTFSSNNVPIVFMGLCDNVKELKKVKNKIVVCEDKDGASLFYQVDNLDEAKVLGAVFITNVTDMYYSENSFASIIVDPINGEAVKAYIKSYSKNSTSKASMSFMKTVFGIKPAPSVSSYSSRGPSNSCPYVLKPDITAPGTNILAAWPTNVPVMDLGNHKIFNKFNLISGTSMACPHVAGVAALLKGAHGDWSPAAIRSAIMTTSDIFDNTKEHIKDIGNDNKAATPFALGAGHVNPNRALDPGLIYDVGVQDYVNLLCALNYSQKNITAITRSSSNDCSEPSLDLNYPSFIAYFNNGNSSSRTTQEFHRTVTNVGEGETIYVSSITQVEGFRVSVIPNKLVFTEKNEKLSYKLRIEVARTTKMKKVAFGYLTWMDMKHVVRSPIVVAILE*