Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031384.01.T01 | XP_003618787.1 | 99.752 | 404 | 1 | 0 | 1 | 404 | 1 | 404 | 0 | 838 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031384.01.T01 | Q93Z25 | 73.267 | 404 | 105 | 2 | 4 | 404 | 29 | 432 | 0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049140.01 | MsG0680031384.01 | 0.831723 | 1.420022e-55 | 1.554289e-52 |
| MsG0180000360.01 | MsG0680031384.01 | 0.805861 | 1.087827e-49 | 5.818423e-47 |
| MsG0180001565.01 | MsG0680031384.01 | 0.804452 | 2.146127e-49 | 1.106904e-46 |
| MsG0180002421.01 | MsG0680031384.01 | 0.845403 | 4.150276e-59 | 6.908600e-56 |
| MsG0180003509.01 | MsG0680031384.01 | 0.804714 | 1.891797e-49 | 9.824228e-47 |
| MsG0180003858.01 | MsG0680031384.01 | 0.804276 | 2.335106e-49 | 1.198964e-46 |
| MsG0180004099.01 | MsG0680031384.01 | 0.802777 | 4.775948e-49 | 2.359905e-46 |
| MsG0180004147.01 | MsG0680031384.01 | 0.802232 | 6.186052e-49 | 3.014352e-46 |
| MsG0180004495.01 | MsG0680031384.01 | 0.808067 | 3.715785e-50 | 2.103925e-47 |
| MsG0180005021.01 | MsG0680031384.01 | 0.814919 | 1.205668e-51 | 8.195110e-49 |
| MsG0180005022.01 | MsG0680031384.01 | 0.812013 | 5.247733e-51 | 3.298428e-48 |
| MsG0180005024.01 | MsG0680031384.01 | 0.808699 | 2.724225e-50 | 1.568229e-47 |
| MsG0180005025.01 | MsG0680031384.01 | 0.810427 | 1.159232e-50 | 6.985335e-48 |
| MsG0180005275.01 | MsG0680031384.01 | 0.831747 | 1.400866e-55 | 1.534361e-52 |
| MsG0180005692.01 | MsG0680031384.01 | 0.819429 | 1.167036e-52 | 8.978376e-50 |
| MsG0180006000.01 | MsG0680031384.01 | 0.827292 | 1.695585e-54 | 1.630056e-51 |
| MsG0180006023.01 | MsG0680031384.01 | 0.801481 | 8.821187e-49 | 4.217352e-46 |
| MsG0180006260.01 | MsG0680031384.01 | 0.805377 | 1.374574e-49 | 7.260883e-47 |
| MsG0280010779.01 | MsG0680031384.01 | 0.899506 | 1.851818e-77 | 2.297001e-73 |
| MsG0280010785.01 | MsG0680031384.01 | 0.804771 | 1.840845e-49 | 9.573657e-47 |
| MsG0280010868.01 | MsG0680031384.01 | 0.809349 | 1.977139e-50 | 1.158146e-47 |
| MsG0280011034.01 | MsG0680031384.01 | 0.812367 | 4.392579e-51 | 2.787644e-48 |
| MsG0280011154.01 | MsG0680031384.01 | 0.816737 | 4.739630e-52 | 3.385950e-49 |
| MsG0280011282.01 | MsG0680031384.01 | 0.830981 | 2.161941e-55 | 2.314583e-52 |
| MsG0280011399.01 | MsG0680031384.01 | 0.844486 | 7.339957e-59 | 1.186818e-55 |
| MsG0380012522.01 | MsG0680031384.01 | 0.809122 | 2.212085e-50 | 1.287887e-47 |
| MsG0380014132.01 | MsG0680031384.01 | 0.816739 | 4.735286e-52 | 3.383024e-49 |
| MsG0380014387.01 | MsG0680031384.01 | 0.821300 | 4.345341e-53 | 3.521577e-50 |
| MsG0380014754.01 | MsG0680031384.01 | 0.836067 | 1.162417e-56 | 1.448653e-53 |
| MsG0680030763.01 | MsG0680031384.01 | 0.819217 | 1.304003e-52 | 9.973068e-50 |
| MsG0680031384.01 | MsG0680031386.01 | 0.961182 | 2.092339e-119 | 9.501868e-114 |
| MsG0680031384.01 | MsG0680034722.01 | 0.813041 | 3.128308e-51 | 2.020967e-48 |
| MsG0680031384.01 | MsG0780036752.01 | 0.809345 | 1.981501e-50 | 1.160544e-47 |
| MsG0680031384.01 | MsG0780037094.01 | 0.816026 | 6.836415e-52 | 4.790004e-49 |
| MsG0680031384.01 | MsG0780039430.01 | 0.835543 | 1.578049e-56 | 1.935713e-53 |
| MsG0680031384.01 | MsG0780039622.01 | -0.819338 | 1.224073e-52 | 9.392306e-50 |
| MsG0680031384.01 | MsG0780039712.01 | 0.817535 | 3.135130e-52 | 2.289266e-49 |
| MsG0680031384.01 | MsG0780041063.01 | 0.826346 | 2.853539e-54 | 2.669161e-51 |
| MsG0680031384.01 | MsG0780041787.01 | 0.809127 | 2.205897e-50 | 1.284487e-47 |
| MsG0680031384.01 | MsG0880042836.01 | 0.854114 | 1.527141e-61 | 3.375007e-58 |
| MsG0680031384.01 | MsG0880042845.01 | 0.829316 | 5.509683e-55 | 5.620118e-52 |
| MsG0680031384.01 | MsG0880042961.01 | 0.815549 | 8.733321e-52 | 6.039571e-49 |
| MsG0680031384.01 | MsG0880043299.01 | 0.802012 | 6.865813e-49 | 3.326839e-46 |
| MsG0680031384.01 | MsG0880043516.01 | 0.840928 | 6.471330e-58 | 9.358967e-55 |
| MsG0680031384.01 | MsG0880043547.01 | 0.812561 | 3.984266e-51 | 2.541550e-48 |
| MsG0680031384.01 | MsG0880044025.01 | 0.825360 | 4.890533e-54 | 4.447665e-51 |
| MsG0680031384.01 | MsG0880046762.01 | 0.822494 | 2.298780e-53 | 1.927173e-50 |
| MsG0680031384.01 | MsG0880047226.01 | 0.821535 | 3.834599e-53 | 3.128071e-50 |
| MsG0680031384.01 | MsG0880047293.01 | 0.800042 | 1.734783e-48 | 7.996769e-46 |
| MsG0480018918.01 | MsG0680031384.01 | 0.800408 | 1.461479e-48 | 6.800046e-46 |
| MsG0480018919.01 | MsG0680031384.01 | 0.803844 | 2.870805e-49 | 1.457859e-46 |
| MsG0480019635.01 | MsG0680031384.01 | 0.851995 | 6.171865e-61 | 1.271317e-57 |
| MsG0480020965.01 | MsG0680031384.01 | 0.830371 | 3.050237e-55 | 3.207488e-52 |
| MsG0480021013.01 | MsG0680031384.01 | 0.823704 | 1.200450e-53 | 1.041595e-50 |
| MsG0480021225.01 | MsG0680031384.01 | 0.826271 | 2.972348e-54 | 2.774385e-51 |
| MsG0480022325.01 | MsG0680031384.01 | 0.805710 | 1.170649e-49 | 6.237154e-47 |
| MsG0480022331.01 | MsG0680031384.01 | 0.863353 | 2.645123e-64 | 7.995781e-61 |
| MsG0480023196.01 | MsG0680031384.01 | 0.806424 | 8.283716e-50 | 4.494464e-47 |
| MsG0480023262.01 | MsG0680031384.01 | 0.810094 | 1.367286e-50 | 8.167822e-48 |
| MsG0480023296.01 | MsG0680031384.01 | 0.808128 | 3.606585e-50 | 2.045417e-47 |
| MsG0480023421.01 | MsG0680031384.01 | 0.835914 | 1.271030e-56 | 1.576644e-53 |
| MsG0480023672.01 | MsG0680031384.01 | 0.802229 | 6.194034e-49 | 3.018018e-46 |
| MsG0580024035.01 | MsG0680031384.01 | 0.801047 | 1.082667e-48 | 5.119986e-46 |
| MsG0580024383.01 | MsG0680031384.01 | 0.819233 | 1.293058e-52 | 9.893803e-50 |
| MsG0580024489.01 | MsG0680031384.01 | 0.846878 | 1.646827e-59 | 2.874798e-56 |
| MsG0580024798.01 | MsG0680031384.01 | 0.815168 | 1.061638e-51 | 7.264878e-49 |
| MsG0580025352.01 | MsG0680031384.01 | 0.807614 | 4.637644e-50 | 2.594836e-47 |
| MsG0580025614.01 | MsG0680031384.01 | 0.816399 | 5.641208e-52 | 3.993058e-49 |
| MsG0580025822.01 | MsG0680031384.01 | 0.822356 | 2.474757e-53 | 2.066652e-50 |
| MsG0380015548.01 | MsG0680031384.01 | 0.879942 | 8.249111e-70 | 4.560773e-66 |
| MsG0380016140.01 | MsG0680031384.01 | 0.835141 | 1.994691e-56 | 2.417383e-53 |
| MsG0380016703.01 | MsG0680031384.01 | 0.829239 | 5.754375e-55 | 5.855524e-52 |
| MsG0380016994.01 | MsG0680031384.01 | 0.819390 | 1.191164e-52 | 9.153479e-50 |
| MsG0380017239.01 | MsG0680031384.01 | 0.802049 | 6.746313e-49 | 3.272091e-46 |
| MsG0380017372.01 | MsG0680031384.01 | 0.815684 | 8.148653e-52 | 5.656312e-49 |
| MsG0480018230.01 | MsG0680031384.01 | 0.849210 | 3.742570e-60 | 7.044201e-57 |
| MsG0480018256.01 | MsG0680031384.01 | 0.802061 | 6.706127e-49 | 3.253637e-46 |
| MsG0580026186.01 | MsG0680031384.01 | 0.826172 | 3.139143e-54 | 2.921746e-51 |
| MsG0580026593.01 | MsG0680031384.01 | 0.819065 | 1.412465e-52 | 1.075742e-49 |
| MsG0580028756.01 | MsG0680031384.01 | 0.812428 | 4.260361e-51 | 2.708278e-48 |
| MsG0580029298.01 | MsG0680031384.01 | 0.829534 | 4.877065e-55 | 5.005522e-52 |
| MsG0580029640.01 | MsG0680031384.01 | 0.821554 | 3.796690e-53 | 3.098873e-50 |
| MsG0280006477.01 | MsG0680031384.01 | 0.836539 | 8.819251e-57 | 1.114745e-53 |
| MsG0280007359.01 | MsG0680031384.01 | 0.804683 | 1.920628e-49 | 9.965720e-47 |
| MsG0280008280.01 | MsG0680031384.01 | 0.824026 | 1.008504e-53 | 8.828553e-51 |
| MsG0280008590.01 | MsG0680031384.01 | 0.800626 | 1.319420e-48 | 6.172954e-46 |
| MsG0280009118.01 | MsG0680031384.01 | 0.843534 | 1.321169e-58 | 2.073282e-55 |
| MsG0280009156.01 | MsG0680031384.01 | 0.812178 | 4.830787e-51 | 3.050087e-48 |
| MsG0280009514.01 | MsG0680031384.01 | 0.862365 | 5.336391e-64 | 1.558846e-60 |
| MsG0280009752.01 | MsG0680031384.01 | 0.822206 | 2.681976e-53 | 2.229950e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680031384.01 | MsG0680031386.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031384.01.T01 | MTR_6g021950 | 99.752 | 404 | 1 | 0 | 1 | 404 | 1 | 404 | 0.0 | 838 |
| MsG0680031384.01.T01 | MTR_4g104320 | 81.152 | 382 | 71 | 1 | 24 | 404 | 26 | 407 | 0.0 | 639 |
| MsG0680031384.01.T01 | MTR_3g075320 | 75.931 | 403 | 97 | 0 | 2 | 404 | 4 | 406 | 0.0 | 619 |
| MsG0680031384.01.T01 | MTR_3g086310 | 75.448 | 391 | 93 | 2 | 14 | 404 | 16 | 403 | 0.0 | 588 |
| MsG0680031384.01.T01 | MTR_1g047370 | 68.146 | 383 | 122 | 0 | 22 | 404 | 68 | 450 | 0.0 | 566 |
| MsG0680031384.01.T01 | MTR_7g059290 | 66.062 | 386 | 131 | 0 | 19 | 404 | 59 | 444 | 0.0 | 551 |
| MsG0680031384.01.T01 | MTR_3g086320 | 66.339 | 407 | 133 | 4 | 1 | 404 | 1 | 406 | 0.0 | 534 |
| MsG0680031384.01.T01 | MTR_1g062930 | 62.500 | 384 | 137 | 1 | 26 | 402 | 34 | 417 | 0.0 | 515 |
| MsG0680031384.01.T01 | MTR_1g111590 | 64.879 | 373 | 128 | 1 | 27 | 396 | 35 | 407 | 0.0 | 514 |
| MsG0680031384.01.T01 | MTR_7g102940 | 60.794 | 403 | 156 | 2 | 1 | 402 | 11 | 412 | 4.95e-178 | 504 |
| MsG0680031384.01.T01 | MTR_4g107870 | 57.487 | 374 | 154 | 3 | 34 | 404 | 63 | 434 | 3.53e-160 | 457 |
| MsG0680031384.01.T01 | MTR_3g075320 | 75.000 | 284 | 71 | 0 | 2 | 285 | 4 | 287 | 5.18e-157 | 444 |
| MsG0680031384.01.T01 | MTR_5g038510 | 56.250 | 368 | 160 | 1 | 38 | 404 | 82 | 449 | 1.82e-153 | 441 |
| MsG0680031384.01.T01 | MTR_8g468980 | 53.616 | 401 | 170 | 4 | 20 | 404 | 55 | 455 | 8.57e-152 | 437 |
| MsG0680031384.01.T01 | MTR_4g132460 | 60.857 | 350 | 133 | 3 | 56 | 404 | 39 | 385 | 3.01e-151 | 433 |
| MsG0680031384.01.T01 | MTR_5g038490 | 55.928 | 388 | 162 | 3 | 26 | 404 | 62 | 449 | 3.96e-150 | 433 |
| MsG0680031384.01.T01 | MTR_2g023990 | 52.278 | 417 | 178 | 6 | 1 | 404 | 1 | 409 | 1.87e-146 | 422 |
| MsG0680031384.01.T01 | MTR_6g011420 | 53.299 | 394 | 171 | 3 | 24 | 404 | 60 | 453 | 2.30e-146 | 423 |
| MsG0680031384.01.T01 | MTR_7g009390 | 58.192 | 354 | 147 | 1 | 52 | 404 | 98 | 451 | 5.84e-143 | 414 |
| MsG0680031384.01.T01 | MTR_8g078390 | 45.480 | 354 | 185 | 6 | 56 | 404 | 42 | 392 | 6.86e-99 | 300 |
| MsG0680031384.01.T01 | MTR_3g030900 | 45.198 | 354 | 186 | 6 | 56 | 404 | 23 | 373 | 1.99e-97 | 296 |
| MsG0680031384.01.T01 | MTR_8g078310 | 45.198 | 354 | 186 | 6 | 56 | 404 | 42 | 392 | 3.30e-97 | 296 |
| MsG0680031384.01.T01 | MTR_3g070740 | 65.854 | 205 | 57 | 2 | 201 | 404 | 134 | 326 | 7.84e-92 | 280 |
| MsG0680031384.01.T01 | MTR_8g078350 | 45.198 | 354 | 186 | 6 | 56 | 404 | 42 | 392 | 1.54e-91 | 281 |
| MsG0680031384.01.T01 | MTR_4g064420 | 44.540 | 348 | 172 | 7 | 56 | 400 | 42 | 371 | 8.32e-90 | 277 |
| MsG0680031384.01.T01 | MTR_8g078280 | 43.503 | 354 | 192 | 6 | 56 | 404 | 42 | 392 | 1.22e-89 | 276 |
| MsG0680031384.01.T01 | MTR_5g019060 | 42.373 | 354 | 196 | 6 | 56 | 404 | 41 | 391 | 2.43e-84 | 263 |
| MsG0680031384.01.T01 | MTR_5g035840 | 42.373 | 354 | 196 | 6 | 56 | 404 | 41 | 391 | 6.19e-84 | 261 |
| MsG0680031384.01.T01 | MTR_5g019160 | 42.090 | 354 | 197 | 6 | 56 | 404 | 41 | 391 | 1.44e-83 | 261 |
| MsG0680031384.01.T01 | MTR_5g019170 | 42.609 | 345 | 190 | 6 | 56 | 395 | 41 | 382 | 3.74e-81 | 256 |
| MsG0680031384.01.T01 | MTR_5g019090 | 42.090 | 354 | 197 | 6 | 56 | 404 | 41 | 391 | 4.91e-81 | 254 |
| MsG0680031384.01.T01 | MTR_2g023980 | 50.584 | 257 | 93 | 6 | 131 | 385 | 1 | 225 | 6.30e-73 | 231 |
| MsG0680031384.01.T01 | MTR_1g069950 | 43.657 | 268 | 147 | 3 | 131 | 396 | 1 | 266 | 9.41e-69 | 218 |
| MsG0680031384.01.T01 | MTR_6g077900 | 44.043 | 277 | 134 | 6 | 89 | 364 | 6 | 262 | 5.65e-59 | 194 |
| MsG0680031384.01.T01 | MTR_1g115550 | 38.699 | 292 | 153 | 7 | 69 | 359 | 9 | 275 | 8.97e-50 | 171 |
| MsG0680031384.01.T01 | MTR_1g067450 | 36.491 | 285 | 157 | 4 | 75 | 359 | 64 | 324 | 5.56e-40 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031384.01.T01 | AT5G63180 | 73.267 | 404 | 105 | 2 | 4 | 404 | 29 | 432 | 0.0 | 617 |
| MsG0680031384.01.T01 | AT3G27400 | 72.705 | 403 | 104 | 2 | 7 | 404 | 15 | 416 | 0.0 | 615 |
| MsG0680031384.01.T01 | AT3G27400 | 72.705 | 403 | 104 | 2 | 7 | 404 | 11 | 412 | 0.0 | 615 |
| MsG0680031384.01.T01 | AT1G67750 | 74.036 | 389 | 99 | 1 | 16 | 404 | 22 | 408 | 0.0 | 608 |
| MsG0680031384.01.T01 | AT4G24780 | 73.116 | 398 | 105 | 2 | 8 | 404 | 12 | 408 | 0.0 | 594 |
| MsG0680031384.01.T01 | AT4G24780 | 73.116 | 398 | 105 | 2 | 8 | 404 | 12 | 408 | 0.0 | 594 |
| MsG0680031384.01.T01 | AT4G13710 | 66.667 | 393 | 127 | 1 | 16 | 404 | 78 | 470 | 0.0 | 589 |
| MsG0680031384.01.T01 | AT4G13710 | 66.667 | 393 | 127 | 1 | 16 | 404 | 59 | 451 | 0.0 | 587 |
| MsG0680031384.01.T01 | AT3G07010 | 68.317 | 404 | 121 | 1 | 8 | 404 | 13 | 416 | 0.0 | 573 |
| MsG0680031384.01.T01 | AT3G07010 | 71.088 | 377 | 109 | 0 | 28 | 404 | 7 | 383 | 0.0 | 568 |
| MsG0680031384.01.T01 | AT1G04680 | 67.617 | 386 | 121 | 1 | 23 | 404 | 44 | 429 | 0.0 | 556 |
| MsG0680031384.01.T01 | AT3G24670 | 68.586 | 382 | 120 | 0 | 23 | 404 | 59 | 440 | 0.0 | 551 |
| MsG0680031384.01.T01 | AT3G24230 | 65.026 | 386 | 130 | 2 | 23 | 404 | 67 | 451 | 0.0 | 545 |
| MsG0680031384.01.T01 | AT5G48900 | 64.663 | 416 | 133 | 2 | 3 | 404 | 2 | 417 | 0.0 | 535 |
| MsG0680031384.01.T01 | AT4G13210 | 68.407 | 383 | 120 | 1 | 23 | 404 | 56 | 438 | 0.0 | 527 |
| MsG0680031384.01.T01 | AT4G13210 | 68.407 | 383 | 120 | 1 | 23 | 404 | 19 | 401 | 0.0 | 526 |
| MsG0680031384.01.T01 | AT3G53190 | 62.222 | 405 | 137 | 3 | 7 | 396 | 11 | 414 | 1.33e-179 | 509 |
| MsG0680031384.01.T01 | AT5G04310 | 62.402 | 383 | 131 | 1 | 27 | 396 | 53 | 435 | 2.65e-171 | 488 |
| MsG0680031384.01.T01 | AT5G04310 | 62.402 | 383 | 131 | 1 | 27 | 396 | 53 | 435 | 4.41e-170 | 486 |
| MsG0680031384.01.T01 | AT5G04310 | 62.402 | 383 | 131 | 1 | 27 | 396 | 53 | 435 | 4.41e-170 | 486 |
| MsG0680031384.01.T01 | AT5G55720 | 56.608 | 401 | 159 | 4 | 5 | 404 | 6 | 392 | 1.65e-167 | 475 |
| MsG0680031384.01.T01 | AT3G54920 | 59.481 | 385 | 132 | 4 | 27 | 396 | 37 | 412 | 3.36e-167 | 478 |
| MsG0680031384.01.T01 | AT1G14420 | 54.211 | 380 | 166 | 2 | 33 | 404 | 80 | 459 | 3.97e-151 | 436 |
| MsG0680031384.01.T01 | AT1G11920 | 58.000 | 350 | 144 | 3 | 56 | 404 | 37 | 384 | 6.76e-148 | 425 |
| MsG0680031384.01.T01 | AT4G22090 | 57.429 | 350 | 145 | 3 | 56 | 404 | 47 | 393 | 1.28e-145 | 419 |
| MsG0680031384.01.T01 | AT3G01270 | 56.056 | 355 | 154 | 2 | 52 | 404 | 121 | 475 | 2.79e-145 | 421 |
| MsG0680031384.01.T01 | AT5G15110 | 55.211 | 355 | 157 | 2 | 52 | 404 | 118 | 472 | 3.04e-145 | 421 |
| MsG0680031384.01.T01 | AT4G22080 | 57.143 | 350 | 146 | 3 | 56 | 404 | 47 | 393 | 1.27e-143 | 414 |
| MsG0680031384.01.T01 | AT2G02720 | 53.521 | 355 | 159 | 1 | 56 | 404 | 101 | 455 | 3.82e-140 | 407 |
| MsG0680031384.01.T01 | AT1G30350 | 51.621 | 401 | 161 | 5 | 4 | 404 | 1 | 368 | 5.93e-140 | 404 |
| MsG0680031384.01.T01 | AT5G09280 | 47.984 | 248 | 127 | 2 | 89 | 335 | 6 | 252 | 5.41e-78 | 243 |
| MsG0680031384.01.T01 | AT3G55140 | 39.510 | 286 | 147 | 7 | 75 | 359 | 16 | 276 | 2.81e-50 | 172 |
| MsG0680031384.01.T01 | AT3G09540 | 36.111 | 288 | 158 | 5 | 73 | 359 | 61 | 323 | 1.92e-43 | 155 |
| MsG0680031384.01.T01 | AT3G55140 | 39.044 | 251 | 132 | 6 | 110 | 359 | 22 | 252 | 4.21e-42 | 150 |
| MsG0680031384.01.T01 | AT3G09540 | 35.764 | 288 | 155 | 6 | 73 | 359 | 61 | 319 | 1.86e-41 | 150 |
| MsG0680031384.01.T01 | AT3G09540 | 35.510 | 245 | 134 | 4 | 73 | 317 | 61 | 281 | 6.83e-36 | 133 |
Find 100 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTAATTCACAACATATT+TGG | 0.148343 | 6:-19589577 | MsG0680031384.01.T01:CDS |
| TTGTAAAACCAGTTGTAAAA+TGG | 0.149892 | 6:+19587967 | None:intergenic |
| TGTCGGTTGTTCTCCCAATT+TGG | 0.183698 | 6:+19590004 | None:intergenic |
| GAAGAGGATGAAACAAAATT+TGG | 0.190078 | 6:+19591118 | None:intergenic |
| CACCAGAACATAGTGGATTT+TGG | 0.212123 | 6:-19589628 | MsG0680031384.01.T01:CDS |
| ATGCATACCTTGGCATTCTT+TGG | 0.240400 | 6:+19589360 | None:intergenic |
| ATCTACATTGTCACTGATTC+AGG | 0.262745 | 6:-19589920 | MsG0680031384.01.T01:CDS |
| GTTATTAAATTATTTACATT+TGG | 0.276421 | 6:-19587839 | MsG0680031384.01.T01:three_prime_UTR |
| TCAATTAAAACAAGAGCTTT+TGG | 0.287323 | 6:-19589801 | MsG0680031384.01.T01:CDS |
| TTCATATATTGTAATCATAT+TGG | 0.293726 | 6:-19587788 | MsG0680031384.01.T01:three_prime_UTR |
| TCATGACAAAGTTATGCTTT+TGG | 0.300199 | 6:-19589459 | MsG0680031384.01.T01:CDS |
| GCTGATTGTGCAATTGGATT+TGG | 0.305034 | 6:-19589974 | MsG0680031384.01.T01:CDS |
| GTCGGTTGTTCTCCCAATTT+GGG | 0.308400 | 6:+19590005 | None:intergenic |
| CAATTCAAGATGAACCATTA+TGG | 0.310393 | 6:-19589850 | MsG0680031384.01.T01:CDS |
| TCCTTGCTAAATCTATTATC+TGG | 0.317797 | 6:+19588461 | None:intergenic |
| TACCTTAATGTTCCTGGCTT+AGG | 0.318773 | 6:+19589878 | None:intergenic |
| GTTGGAGATGTGACCCAAAT+TGG | 0.323275 | 6:-19590018 | MsG0680031384.01.T01:CDS |
| TACAATATATGAAAAGAAAA+AGG | 0.323722 | 6:+19587798 | None:intergenic |
| TTATTAAATTATTTACATTT+GGG | 0.330168 | 6:-19587838 | MsG0680031384.01.T01:three_prime_UTR |
| GGTTCCATCACTACTACTTC+TGG | 0.332285 | 6:-19588272 | MsG0680031384.01.T01:CDS |
| GCACCATACCTTAATGTTCC+TGG | 0.337883 | 6:+19589872 | None:intergenic |
| TTCCCTTGGCTGTTGATTGT+AGG | 0.338196 | 6:+19588497 | None:intergenic |
| ACCTTAATGTTCCTGGCTTA+GGG | 0.354026 | 6:+19589879 | None:intergenic |
| ACATCTTGTACAACAAGTTC+AGG | 0.356255 | 6:+19591085 | None:intergenic |
| AGACTAGCTGATTGTGCAAT+TGG | 0.358822 | 6:-19589980 | MsG0680031384.01.T01:CDS |
| CATCTCCAACAATCATCAAT+TGG | 0.359076 | 6:+19590031 | None:intergenic |
| ACCCTAAGCCAGGAACATTA+AGG | 0.369613 | 6:-19589880 | MsG0680031384.01.T01:CDS |
| GGTCTTATTGATGTTATTCA+TGG | 0.370022 | 6:-19589521 | MsG0680031384.01.T01:CDS |
| GTGAATATAATAGCTGGAAT+TGG | 0.370547 | 6:-19588409 | MsG0680031384.01.T01:CDS |
| TGTAAAACCAGTTGTAAAAT+GGG | 0.376486 | 6:+19587968 | None:intergenic |
| CTTAATTTATTGTTTCTCAT+TGG | 0.378688 | 6:-19587994 | MsG0680031384.01.T01:three_prime_UTR |
| CACAATCAGCTAGTCTTTGT+CGG | 0.381751 | 6:+19589987 | None:intergenic |
| GCAAGACCAGCCTCTCTTGT+TGG | 0.384223 | 6:-19588293 | MsG0680031384.01.T01:CDS |
| CTTGTACAATGGAAAGAAAA+TGG | 0.394829 | 6:-19587757 | MsG0680031384.01.T01:three_prime_UTR |
| GAGGGTGATTTGTTCTTGAA+TGG | 0.394829 | 6:-19588380 | MsG0680031384.01.T01:CDS |
| CTCTAGGTCTAGGAGAAACT+TGG | 0.396252 | 6:-19590080 | MsG0680031384.01.T01:CDS |
| AAGAGGATGAAACAAAATTT+GGG | 0.396495 | 6:+19591119 | None:intergenic |
| GGCTATTTATCATGTGGAAC+TGG | 0.405816 | 6:-19590058 | MsG0680031384.01.T01:CDS |
| AATTTATCTCCGATTAAAAT+CGG | 0.419802 | 6:-19588170 | MsG0680031384.01.T01:three_prime_UTR |
| GTTCATGATTGTGTTCCAAC+GGG | 0.420422 | 6:-19589671 | MsG0680031384.01.T01:CDS |
| GGAGCATTCTTTAGACAAAC+TGG | 0.421504 | 6:-19588359 | MsG0680031384.01.T01:CDS |
| TCCCTTGGCTGTTGATTGTA+GGG | 0.426471 | 6:+19588498 | None:intergenic |
| AATTCATACAAGACAATTGA+TGG | 0.427271 | 6:-19589776 | MsG0680031384.01.T01:CDS |
| GATCATATTCAAAAGAGATA+TGG | 0.439191 | 6:-19589828 | MsG0680031384.01.T01:CDS |
| CATTGGGAAATGTATGCAAT+TGG | 0.444123 | 6:-19588533 | MsG0680031384.01.T01:CDS |
| AGACTTAGAAAGATAGTTTG+TGG | 0.451029 | 6:+19591214 | None:intergenic |
| GAACAATGATTACACACATT+GGG | 0.453403 | 6:-19588549 | MsG0680031384.01.T01:CDS |
| GCAACCCAATTGATGATTGT+TGG | 0.461820 | 6:-19590036 | MsG0680031384.01.T01:CDS |
| GTTAATAATGTTATAATACA+TGG | 0.461906 | 6:-19589701 | MsG0680031384.01.T01:CDS |
| GGATTTGGAAAAGATGCAAT+TGG | 0.464882 | 6:-19589959 | MsG0680031384.01.T01:CDS |
| CAGAAAGTGAATATAATAGC+TGG | 0.465031 | 6:-19588415 | MsG0680031384.01.T01:CDS |
| GTCCAAAATCCACTATGTTC+TGG | 0.466293 | 6:+19589626 | None:intergenic |
| GTGCAAGAAATCTGTTCCCT+TGG | 0.476596 | 6:+19588483 | None:intergenic |
| TTGCAACTACAAGTTGTGTA+TGG | 0.478515 | 6:-19587861 | MsG0680031384.01.T01:three_prime_UTR |
| GCATCAATGTCTCTAGGTCT+AGG | 0.489694 | 6:-19590090 | MsG0680031384.01.T01:CDS |
| ATCTCCAACAATCATCAATT+GGG | 0.489891 | 6:+19590032 | None:intergenic |
| AAATTTAACTTTGTTTCTTG+AGG | 0.490789 | 6:-19587943 | MsG0680031384.01.T01:three_prime_UTR |
| CTAATATTTGTATTCCCCGT+TGG | 0.498447 | 6:+19589656 | None:intergenic |
| TTGGAGATGTGACCCAAATT+GGG | 0.502512 | 6:-19590017 | MsG0680031384.01.T01:CDS |
| AGTAATTTAAATACATTCGA+AGG | 0.506888 | 6:-19588064 | MsG0680031384.01.T01:three_prime_UTR |
| GTAGGAGCATCAATGTCTCT+AGG | 0.514562 | 6:-19590096 | MsG0680031384.01.T01:intron |
| TGGTGTGCTTACTTGCAAGA+AGG | 0.524331 | 6:-19588252 | MsG0680031384.01.T01:CDS |
| AGCTGGAATTGGAGATCAGA+GGG | 0.527960 | 6:-19588398 | MsG0680031384.01.T01:CDS |
| TCTTTGTCTAATTGTCGTGA+TGG | 0.533384 | 6:-19589542 | MsG0680031384.01.T01:CDS |
| TGGGAAATGTATGCAATTGG+AGG | 0.535593 | 6:-19588530 | MsG0680031384.01.T01:CDS |
| ATGGAACCAACAAGAGAGGC+TGG | 0.542918 | 6:+19588287 | None:intergenic |
| TGTTCATGATTGTGTTCCAA+CGG | 0.543560 | 6:-19589672 | MsG0680031384.01.T01:CDS |
| TGAACAATGATTACACACAT+TGG | 0.549687 | 6:-19588550 | MsG0680031384.01.T01:CDS |
| TACACAAGACAAGGACATGC+AGG | 0.550208 | 6:-19589420 | MsG0680031384.01.T01:CDS |
| TGGCCATGTTGCTTGTACAA+TGG | 0.550286 | 6:-19587768 | MsG0680031384.01.T01:three_prime_UTR |
| TACAAGACAATTGATGGAAG+AGG | 0.566366 | 6:-19589770 | MsG0680031384.01.T01:CDS |
| GGTGTGCTTACTTGCAAGAA+GGG | 0.567542 | 6:-19588251 | MsG0680031384.01.T01:CDS |
| ACCAGATAATAGATTTAGCA+AGG | 0.568377 | 6:-19588462 | MsG0680031384.01.T01:CDS |
| AAAATGGATGCAGTTAGTGT+TGG | 0.569567 | 6:-19587741 | MsG0680031384.01.T01:three_prime_UTR |
| AATTCCATCACCATCAGAAA+CGG | 0.571243 | 6:+19589604 | None:intergenic |
| AACCCTACAATCAACAGCCA+AGG | 0.572050 | 6:-19588500 | MsG0680031384.01.T01:CDS |
| AACTTGGGCTATTTATCATG+TGG | 0.574554 | 6:-19590064 | MsG0680031384.01.T01:CDS |
| GTAATTTAAATACATTCGAA+GGG | 0.575271 | 6:-19588063 | MsG0680031384.01.T01:three_prime_UTR |
| AAGCCAGGAACATTAAGGTA+TGG | 0.578760 | 6:-19589875 | MsG0680031384.01.T01:CDS |
| TTCAGGGTCTTGAACTGAAG+AGG | 0.579107 | 6:+19591102 | None:intergenic |
| GCTAGTGTTCACATTGCAAA+TGG | 0.586396 | 6:-19589746 | MsG0680031384.01.T01:CDS |
| CACACCAGAAGTAGTAGTGA+TGG | 0.594623 | 6:+19588268 | None:intergenic |
| CATCTTGTACAACAAGTTCA+GGG | 0.601679 | 6:+19591086 | None:intergenic |
| TGGACCGTTTCTGATGGTGA+TGG | 0.601944 | 6:-19589608 | MsG0680031384.01.T01:CDS |
| GATGCAGTAAACCCTAAGCC+AGG | 0.603794 | 6:-19589890 | MsG0680031384.01.T01:CDS |
| TTTCCATTGTACAAGCAACA+TGG | 0.611745 | 6:+19587765 | None:intergenic |
| GGGAAATGTATGCAATTGGA+GGG | 0.622895 | 6:-19588529 | MsG0680031384.01.T01:CDS |
| TTTGGAAAAGATGCAATTGG+TGG | 0.625951 | 6:-19589956 | MsG0680031384.01.T01:CDS |
| ACCCTACAATCAACAGCCAA+GGG | 0.631197 | 6:-19588499 | MsG0680031384.01.T01:CDS |
| TCTAGGTCTAGGAGAAACTT+GGG | 0.631443 | 6:-19590079 | MsG0680031384.01.T01:CDS |
| AGAGACTCACCAGAACATAG+TGG | 0.640397 | 6:-19589635 | MsG0680031384.01.T01:CDS |
| AGTGTTCACATTGCAAATGG+TGG | 0.646316 | 6:-19589743 | MsG0680031384.01.T01:CDS |
| TAGCTGGAATTGGAGATCAG+AGG | 0.658304 | 6:-19588399 | MsG0680031384.01.T01:CDS |
| AGTGATGGAACCAACAAGAG+AGG | 0.669990 | 6:+19588283 | None:intergenic |
| TTCATGATTGTGTTCCAACG+GGG | 0.685435 | 6:-19589670 | MsG0680031384.01.T01:CDS |
| TGATTCTTATACACAAGACA+AGG | 0.687935 | 6:-19589429 | MsG0680031384.01.T01:CDS |
| TTGTTGTACAAGATGTACAA+AGG | 0.691137 | 6:-19591078 | MsG0680031384.01.T01:intron |
| GGCTTGTCCAAAGAATGCCA+AGG | 0.703891 | 6:-19589367 | MsG0680031384.01.T01:intron |
| TAGACATGGCTACTTTCATG+TGG | 0.715841 | 6:-19588573 | MsG0680031384.01.T01:CDS |
| TATATAAATATGATACTACG+AGG | 0.791793 | 6:+19587888 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGCTAAAAAAAAATATTAA+AGG | + | Chr6:19589649-19589668 | None:intergenic | 10.0% |
| !! | CATAATATATATAATTAACT+TGG | + | Chr6:19588762-19588781 | None:intergenic | 10.0% |
| !! | GTTATTAAATTATTTACATT+TGG | - | Chr6:19591114-19591133 | MsG0680031384.01.T01:CDS | 10.0% |
| !!! | GATTTTGTATTTTTTTATTT+TGG | + | Chr6:19588267-19588286 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTTTTGAAAA+AGG | - | Chr6:19588501-19588520 | MsG0680031384.01.T01:CDS | 10.0% |
| !!! | TAATTTAACTTTTTTAATAG+TGG | - | Chr6:19590838-19590857 | MsG0680031384.01.T01:intron | 10.0% |
| !! | AAACCCAAATTAAAAAAAAT+TGG | - | Chr6:19589739-19589758 | MsG0680031384.01.T01:CDS | 15.0% |
| !! | AACCCAAATTAAAAAAAATT+GGG | - | Chr6:19589740-19589759 | MsG0680031384.01.T01:CDS | 15.0% |
| !! | CAAATGTATAAATAATGTAT+TGG | - | Chr6:19588595-19588614 | MsG0680031384.01.T01:intron | 15.0% |
| !! | CAATACATTATTTATACATT+TGG | + | Chr6:19588597-19588616 | None:intergenic | 15.0% |
| !! | CAATCACAAATAAAATTATT+TGG | + | Chr6:19589873-19589892 | None:intergenic | 15.0% |
| !! | CTGAAAACAATAATTATTTA+TGG | + | Chr6:19590357-19590376 | None:intergenic | 15.0% |
| !! | GTTAATAATGTTATAATACA+TGG | - | Chr6:19589252-19589271 | MsG0680031384.01.T01:intron | 15.0% |
| !! | TAATTAATGTTTGAAGATAA+GGG | + | Chr6:19588721-19588740 | None:intergenic | 15.0% |
| !! | TACAATATATGAAAAGAAAA+AGG | + | Chr6:19591158-19591177 | None:intergenic | 15.0% |
| !! | TTAATTAATGTTTGAAGATA+AGG | + | Chr6:19588722-19588741 | None:intergenic | 15.0% |
| !! | TTCATATATTGTAATCATAT+TGG | - | Chr6:19591165-19591184 | MsG0680031384.01.T01:CDS | 15.0% |
| !! | TTTATAAAGAAAAAAGTCTT+TGG | - | Chr6:19588448-19588467 | MsG0680031384.01.T01:CDS | 15.0% |
| !!! | AAGACTTTTTTCTTTATAAA+TGG | + | Chr6:19588448-19588467 | None:intergenic | 15.0% |
| !!! | AATATTTTTTTTTAGCATAG+TGG | - | Chr6:19589651-19589670 | MsG0680031384.01.T01:CDS | 15.0% |
| !!! | AGACTTTTTTCTTTATAAAT+GGG | + | Chr6:19588447-19588466 | None:intergenic | 15.0% |
| !!! | ATTTTAATTTCTCTTTTTGT+AGG | - | Chr6:19588839-19588858 | MsG0680031384.01.T01:intron | 15.0% |
| !!! | GACATTTTTTTTATGTTTAT+GGG | + | Chr6:19590040-19590059 | None:intergenic | 15.0% |
| !!! | TGACATTTTTTTTATGTTTA+TGG | + | Chr6:19590041-19590060 | None:intergenic | 15.0% |
| !! | AAAGTTTGATTCATATGTAA+TGG | - | Chr6:19588008-19588027 | MsG0680031384.01.T01:three_prime_UTR | 20.0% |
| !! | AAATTCAAAAAGTAGGATAA+AGG | - | Chr6:19590238-19590257 | MsG0680031384.01.T01:intron | 20.0% |
| !! | AATTTATCTCCGATTAAAAT+CGG | - | Chr6:19590783-19590802 | MsG0680031384.01.T01:intron | 20.0% |
| !! | AGTAATTTAAATACATTCGA+AGG | - | Chr6:19590889-19590908 | MsG0680031384.01.T01:intron | 20.0% |
| !! | ATGATACTACTAAGAAATTA+GGG | + | Chr6:19590137-19590156 | None:intergenic | 20.0% |
| !! | ATTTAATAGAAATGCATTGT+TGG | - | Chr6:19588366-19588385 | MsG0680031384.01.T01:CDS | 20.0% |
| !! | CCTTAAAAAATTCAAAAAGT+AGG | - | Chr6:19590231-19590250 | MsG0680031384.01.T01:intron | 20.0% |
| !! | GTAATTTAAATACATTCGAA+GGG | - | Chr6:19590890-19590909 | MsG0680031384.01.T01:intron | 20.0% |
| !! | TATATAAATATGATACTACG+AGG | + | Chr6:19591068-19591087 | None:intergenic | 20.0% |
| !! | TGTTTAATTCACAACATATT+TGG | - | Chr6:19589376-19589395 | MsG0680031384.01.T01:CDS | 20.0% |
| !! | TTTAATGATGTTGAATAAAG+TGG | - | Chr6:19589803-19589822 | MsG0680031384.01.T01:CDS | 20.0% |
| !!! | AAATTTAACTTTGTTTCTTG+AGG | - | Chr6:19591010-19591029 | MsG0680031384.01.T01:intron | 20.0% |
| !!! | ACTATTGCTTTTAATCATTT+TGG | - | Chr6:19589558-19589577 | MsG0680031384.01.T01:CDS | 20.0% |
| !!! | ATGCCCAATTTTTTTTAATT+TGG | + | Chr6:19589746-19589765 | None:intergenic | 20.0% |
| !!! | CCTACTTTTTGAATTTTTTA+AGG | + | Chr6:19590234-19590253 | None:intergenic | 20.0% |
| !!! | CTTAATTTATTGTTTCTCAT+TGG | - | Chr6:19590959-19590978 | MsG0680031384.01.T01:intron | 20.0% |
| !!! | TGCCCAATTTTTTTTAATTT+GGG | + | Chr6:19589745-19589764 | None:intergenic | 20.0% |
| !!! | TTGAATTTTTTAAGGTAGTT+AGG | + | Chr6:19590226-19590245 | None:intergenic | 20.0% |
| ! | AAAAAAAGTTGAAATGACGA+GGG | - | Chr6:19590747-19590766 | MsG0680031384.01.T01:intron | 25.0% |
| ! | AAAGAAAATCTCTCTATAGT+TGG | + | Chr6:19589978-19589997 | None:intergenic | 25.0% |
| ! | AAATTACTCTGATATCACTT+TGG | + | Chr6:19588126-19588145 | None:intergenic | 25.0% |
| ! | AAGAAAATCTCTCTATAGTT+GGG | + | Chr6:19589977-19589996 | None:intergenic | 25.0% |
| ! | AAGAGGATGAAACAAAATTT+GGG | + | Chr6:19587837-19587856 | None:intergenic | 25.0% |
| ! | AATTCATACAAGACAATTGA+TGG | - | Chr6:19589177-19589196 | MsG0680031384.01.T01:intron | 25.0% |
| ! | AATTTCTTAGTAGTATCATG+AGG | - | Chr6:19590138-19590157 | MsG0680031384.01.T01:intron | 25.0% |
| ! | ATTAATCTCAAAGCTCATAT+AGG | - | Chr6:19588191-19588210 | MsG0680031384.01.T01:three_prime_UTR | 25.0% |
| ! | CATGATACTACTAAGAAATT+AGG | + | Chr6:19590138-19590157 | None:intergenic | 25.0% |
| ! | GATCATATTCAAAAGAGATA+TGG | - | Chr6:19589125-19589144 | MsG0680031384.01.T01:intron | 25.0% |
| ! | GTTGATTGCACAAAATTTAA+AGG | - | Chr6:19588639-19588658 | MsG0680031384.01.T01:intron | 25.0% |
| ! | TAAAAAAAGTTGAAATGACG+AGG | - | Chr6:19590746-19590765 | MsG0680031384.01.T01:intron | 25.0% |
| ! | TGTAAAACCAGTTGTAAAAT+GGG | + | Chr6:19590988-19591007 | None:intergenic | 25.0% |
| ! | TTGTAAAACCAGTTGTAAAA+TGG | + | Chr6:19590989-19591008 | None:intergenic | 25.0% |
| !! | ATATGAAAAGAAAAAGGCAT+AGG | + | Chr6:19591152-19591171 | None:intergenic | 25.0% |
| !! | CACATTAGATACAATGTTTT+TGG | + | Chr6:19588034-19588053 | None:intergenic | 25.0% |
| !! | CACATTTCTTTGAATTTGTT+AGG | + | Chr6:19590192-19590211 | None:intergenic | 25.0% |
| !! | CTTTTGAATATGATCCATAA+TGG | + | Chr6:19589120-19589139 | None:intergenic | 25.0% |
| !! | GTTAGCAAAAATGTGTTTTT+GGG | - | Chr6:19589694-19589713 | MsG0680031384.01.T01:CDS | 25.0% |
| !! | TCAATTAAAACAAGAGCTTT+TGG | - | Chr6:19589152-19589171 | MsG0680031384.01.T01:intron | 25.0% |
| !! | TGTTAGCAAAAATGTGTTTT+TGG | - | Chr6:19589693-19589712 | MsG0680031384.01.T01:CDS | 25.0% |
| !!! | AACTGATATCCGATTTTAAT+CGG | + | Chr6:19590795-19590814 | None:intergenic | 25.0% |
| !!! | CTTTTAATCATTTTGGTGAA+GGG | - | Chr6:19589565-19589584 | MsG0680031384.01.T01:CDS | 25.0% |
| !!! | GAAAGAGAAGTCATTTTTTT+TGG | + | Chr6:19587784-19587803 | None:intergenic | 25.0% |
| !!! | TTAGGTCTTTACTTTGTTTT+CGG | + | Chr6:19590174-19590193 | None:intergenic | 25.0% |
| !!! | TTTTTTGGAAGAGTAATTGA+AGG | + | Chr6:19587769-19587788 | None:intergenic | 25.0% |
| AAACTTGTGTCTTAAGGTTA+AGG | + | Chr6:19588569-19588588 | None:intergenic | 30.0% | |
| ACAATGTGGTGAATTATCAT+CGG | + | Chr6:19588416-19588435 | None:intergenic | 30.0% | |
| ACCAGATAATAGATTTAGCA+AGG | - | Chr6:19590491-19590510 | MsG0680031384.01.T01:intron | 30.0% | |
| AGACTTAGAAAGATAGTTTG+TGG | + | Chr6:19587742-19587761 | None:intergenic | 30.0% | |
| AGCTGAGAATAAACTAGAAT+CGG | - | Chr6:19588295-19588314 | MsG0680031384.01.T01:CDS | 30.0% | |
| ATCTCCAACAATCATCAATT+GGG | + | Chr6:19588924-19588943 | None:intergenic | 30.0% | |
| CAATTCAAGATGAACCATTA+TGG | - | Chr6:19589103-19589122 | MsG0680031384.01.T01:intron | 30.0% | |
| CAGAAAGTGAATATAATAGC+TGG | - | Chr6:19590538-19590557 | MsG0680031384.01.T01:intron | 30.0% | |
| CTTGTACAATGGAAAGAAAA+TGG | - | Chr6:19591196-19591215 | MsG0680031384.01.T01:five_prime_UTR | 30.0% | |
| GAACAATGATTACACACATT+GGG | - | Chr6:19590404-19590423 | MsG0680031384.01.T01:intron | 30.0% | |
| GAAGAGGATGAAACAAAATT+TGG | + | Chr6:19587838-19587857 | None:intergenic | 30.0% | |
| GGGAGTAAAAATATTTGCTT+AGG | - | Chr6:19589714-19589733 | MsG0680031384.01.T01:CDS | 30.0% | |
| GTGAATATAATAGCTGGAAT+TGG | - | Chr6:19590544-19590563 | MsG0680031384.01.T01:intron | 30.0% | |
| TCCTTGCTAAATCTATTATC+TGG | + | Chr6:19590495-19590514 | None:intergenic | 30.0% | |
| TGAACAATGATTACACACAT+TGG | - | Chr6:19590403-19590422 | MsG0680031384.01.T01:intron | 30.0% | |
| TGATTCTTATACACAAGACA+AGG | - | Chr6:19589524-19589543 | MsG0680031384.01.T01:CDS | 30.0% | |
| TGTCATATATATGCATACCT+TGG | + | Chr6:19589606-19589625 | None:intergenic | 30.0% | |
| TGTGTAAGATCAACTTCTTT+AGG | - | Chr6:19589897-19589916 | MsG0680031384.01.T01:CDS | 30.0% | |
| TTGTTGTACAAGATGTACAA+AGG | - | Chr6:19587875-19587894 | MsG0680031384.01.T01:three_prime_UTR | 30.0% | |
| ! | AATGGGTTTATATGACAATG+TGG | + | Chr6:19588430-19588449 | None:intergenic | 30.0% |
| ! | ATTGTTTTCAGATGTAGACA+TGG | - | Chr6:19590366-19590385 | MsG0680031384.01.T01:intron | 30.0% |
| ! | CATGACAAAGTTATGCTTTT+GGG | - | Chr6:19589495-19589514 | MsG0680031384.01.T01:CDS | 30.0% |
| ! | GCTATTATGAGAGATTTTGA+AGG | + | Chr6:19590094-19590113 | None:intergenic | 30.0% |
| ! | GCTTTTAAACTTGTGTCTTA+AGG | + | Chr6:19588575-19588594 | None:intergenic | 30.0% |
| ! | TCATGACAAAGTTATGCTTT+TGG | - | Chr6:19589494-19589513 | MsG0680031384.01.T01:CDS | 30.0% |
| !! | GCTTTTAATCATTTTGGTGA+AGG | - | Chr6:19589564-19589583 | MsG0680031384.01.T01:CDS | 30.0% |
| !! | GGTCTTATTGATGTTATTCA+TGG | - | Chr6:19589432-19589451 | MsG0680031384.01.T01:CDS | 30.0% |
| AAAATGGATGCAGTTAGTGT+TGG | - | Chr6:19591212-19591231 | MsG0680031384.01.T01:five_prime_UTR | 35.0% | |
| AACTTGGGCTATTTATCATG+TGG | - | Chr6:19588889-19588908 | MsG0680031384.01.T01:intron | 35.0% | |
| AATTCCATCACCATCAGAAA+CGG | + | Chr6:19589352-19589371 | None:intergenic | 35.0% | |
| ACATCTTGTACAACAAGTTC+AGG | + | Chr6:19587871-19587890 | None:intergenic | 35.0% | |
| ATTTCTTAACATGTGCCCTA+AGG | - | Chr6:19588679-19588698 | MsG0680031384.01.T01:intron | 35.0% | |
| CATCTCCAACAATCATCAAT+TGG | + | Chr6:19588925-19588944 | None:intergenic | 35.0% | |
| CATCTTGTACAACAAGTTCA+GGG | + | Chr6:19587870-19587889 | None:intergenic | 35.0% | |
| CATTGGGAAATGTATGCAAT+TGG | - | Chr6:19590420-19590439 | MsG0680031384.01.T01:intron | 35.0% | |
| CTAATATTTGTATTCCCCGT+TGG | + | Chr6:19589300-19589319 | None:intergenic | 35.0% | |
| CTCTCTATAGTTGGGAATAT+GGG | + | Chr6:19589969-19589988 | None:intergenic | 35.0% | |
| GGATTTGGAAAAGATGCAAT+TGG | - | Chr6:19588994-19589013 | MsG0680031384.01.T01:intron | 35.0% | |
| TACAAGACAATTGATGGAAG+AGG | - | Chr6:19589183-19589202 | MsG0680031384.01.T01:intron | 35.0% | |
| TCTCTATAGTTGGGAATATG+GGG | + | Chr6:19589968-19589987 | None:intergenic | 35.0% | |
| TCTCTCTATAGTTGGGAATA+TGG | + | Chr6:19589970-19589989 | None:intergenic | 35.0% | |
| TCTTTGTCTAATTGTCGTGA+TGG | - | Chr6:19589411-19589430 | MsG0680031384.01.T01:CDS | 35.0% | |
| TGTTCATGATTGTGTTCCAA+CGG | - | Chr6:19589281-19589300 | MsG0680031384.01.T01:intron | 35.0% | |
| TTGCAACTACAAGTTGTGTA+TGG | - | Chr6:19591092-19591111 | MsG0680031384.01.T01:CDS | 35.0% | |
| TTTCCATTGTACAAGCAACA+TGG | + | Chr6:19591191-19591210 | None:intergenic | 35.0% | |
| TTTCTTAACATGTGCCCTAA+GGG | - | Chr6:19588680-19588699 | MsG0680031384.01.T01:intron | 35.0% | |
| TTTGGAAAAGATGCAATTGG+TGG | - | Chr6:19588997-19589016 | MsG0680031384.01.T01:intron | 35.0% | |
| ! | GATGCAATTGGTGGTAAAAA+TGG | - | Chr6:19589006-19589025 | MsG0680031384.01.T01:intron | 35.0% |
| ! | GGAGAGAGAATTTTCTATCA+CGG | - | Chr6:19589918-19589937 | MsG0680031384.01.T01:CDS | 35.0% |
| ! | TTTTAGCAGCGAATTAGCAA+CGG | + | Chr6:19590731-19590750 | None:intergenic | 35.0% |
| !! | ATCTACATTGTCACTGATTC+AGG | - | Chr6:19589033-19589052 | MsG0680031384.01.T01:intron | 35.0% |
| AAGCCAGGAACATTAAGGTA+TGG | - | Chr6:19589078-19589097 | MsG0680031384.01.T01:intron | 40.0% | |
| ACCTTAATGTTCCTGGCTTA+GGG | + | Chr6:19589077-19589096 | None:intergenic | 40.0% | |
| AGTGTTCACATTGCAAATGG+TGG | - | Chr6:19589210-19589229 | MsG0680031384.01.T01:intron | 40.0% | |
| ATGCATACCTTGGCATTCTT+TGG | + | Chr6:19589596-19589615 | None:intergenic | 40.0% | |
| GCTAGTGTTCACATTGCAAA+TGG | - | Chr6:19589207-19589226 | MsG0680031384.01.T01:intron | 40.0% | |
| GCTGATTGTGCAATTGGATT+TGG | - | Chr6:19588979-19588998 | MsG0680031384.01.T01:intron | 40.0% | |
| GGCTATTTATCATGTGGAAC+TGG | - | Chr6:19588895-19588914 | MsG0680031384.01.T01:intron | 40.0% | |
| GGGAAATGTATGCAATTGGA+GGG | - | Chr6:19590424-19590443 | MsG0680031384.01.T01:intron | 40.0% | |
| GGGGTTATCTACATAGAGAT+GGG | + | Chr6:19590006-19590025 | None:intergenic | 40.0% | |
| GGTGAATTATCATCGGATGT+CGG | + | Chr6:19588409-19588428 | None:intergenic | 40.0% | |
| GTCCAAAATCCACTATGTTC+TGG | + | Chr6:19589330-19589349 | None:intergenic | 40.0% | |
| GTTCATGATTGTGTTCCAAC+GGG | - | Chr6:19589282-19589301 | MsG0680031384.01.T01:intron | 40.0% | |
| TACCTTAATGTTCCTGGCTT+AGG | + | Chr6:19589078-19589097 | None:intergenic | 40.0% | |
| TCTAGGTCTAGGAGAAACTT+GGG | - | Chr6:19588874-19588893 | MsG0680031384.01.T01:intron | 40.0% | |
| TGGGAAATGTATGCAATTGG+AGG | - | Chr6:19590423-19590442 | MsG0680031384.01.T01:intron | 40.0% | |
| TTCATGATTGTGTTCCAACG+GGG | - | Chr6:19589283-19589302 | MsG0680031384.01.T01:intron | 40.0% | |
| TTGGAGATGTGACCCAAATT+GGG | - | Chr6:19588936-19588955 | MsG0680031384.01.T01:intron | 40.0% | |
| ! | AGACTAGCTGATTGTGCAAT+TGG | - | Chr6:19588973-19588992 | MsG0680031384.01.T01:intron | 40.0% |
| ! | GCAACCCAATTGATGATTGT+TGG | - | Chr6:19588917-19588936 | MsG0680031384.01.T01:intron | 40.0% |
| ! | GGAGCATTCTTTAGACAAAC+TGG | - | Chr6:19590594-19590613 | MsG0680031384.01.T01:intron | 40.0% |
| ! | TAGACATGGCTACTTTCATG+TGG | - | Chr6:19590380-19590399 | MsG0680031384.01.T01:intron | 40.0% |
| ! | TTGGTTGCCCATTTTACAAC+TGG | - | Chr6:19590978-19590997 | MsG0680031384.01.T01:intron | 40.0% |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | + | Chr6:19588697-19588716 | None:intergenic | 40.0% |
| !! | CACAATCAGCTAGTCTTTGT+CGG | + | Chr6:19588969-19588988 | None:intergenic | 40.0% |
| !! | GAGGGTGATTTGTTCTTGAA+TGG | - | Chr6:19590573-19590592 | MsG0680031384.01.T01:intron | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | + | Chr6:19588698-19588717 | None:intergenic | 40.0% |
| !!! | CACCAGAACATAGTGGATTT+TGG | - | Chr6:19589325-19589344 | MsG0680031384.01.T01:intron | 40.0% |
| AACCCTACAATCAACAGCCA+AGG | - | Chr6:19590453-19590472 | MsG0680031384.01.T01:intron | 45.0% | |
| ACCCTAAGCCAGGAACATTA+AGG | - | Chr6:19589073-19589092 | MsG0680031384.01.T01:intron | 45.0% | |
| ACCCTACAATCAACAGCCAA+GGG | - | Chr6:19590454-19590473 | MsG0680031384.01.T01:intron | 45.0% | |
| AGAGACTCACCAGAACATAG+TGG | - | Chr6:19589318-19589337 | MsG0680031384.01.T01:intron | 45.0% | |
| AGCTGGAATTGGAGATCAGA+GGG | - | Chr6:19590555-19590574 | MsG0680031384.01.T01:intron | 45.0% | |
| ATGTAGATAACCCCGCAAGT+GGG | - | Chr6:19590012-19590031 | MsG0680031384.01.T01:CDS | 45.0% | |
| CACACCAGAAGTAGTAGTGA+TGG | + | Chr6:19590688-19590707 | None:intergenic | 45.0% | |
| CATCGGATGTCGGTGTAAAA+TGG | + | Chr6:19588399-19588418 | None:intergenic | 45.0% | |
| CGGGGTTATCTACATAGAGA+TGG | + | Chr6:19590007-19590026 | None:intergenic | 45.0% | |
| CTCTAGGTCTAGGAGAAACT+TGG | - | Chr6:19588873-19588892 | MsG0680031384.01.T01:intron | 45.0% | |
| GCACCATACCTTAATGTTCC+TGG | + | Chr6:19589084-19589103 | None:intergenic | 45.0% | |
| GCATCAATGTCTCTAGGTCT+AGG | - | Chr6:19588863-19588882 | MsG0680031384.01.T01:intron | 45.0% | |
| GGTGTGCTTACTTGCAAGAA+GGG | - | Chr6:19590702-19590721 | MsG0680031384.01.T01:intron | 45.0% | |
| GGTTCCATCACTACTACTTC+TGG | - | Chr6:19590681-19590700 | MsG0680031384.01.T01:intron | 45.0% | |
| GTCGGTTGTTCTCCCAATTT+GGG | + | Chr6:19588951-19588970 | None:intergenic | 45.0% | |
| GTGCAAGAAATCTGTTCCCT+TGG | + | Chr6:19590473-19590492 | None:intergenic | 45.0% | |
| GTTGGAGATGTGACCCAAAT+TGG | - | Chr6:19588935-19588954 | MsG0680031384.01.T01:intron | 45.0% | |
| TACACAAGACAAGGACATGC+AGG | - | Chr6:19589533-19589552 | MsG0680031384.01.T01:CDS | 45.0% | |
| TAGCTGGAATTGGAGATCAG+AGG | - | Chr6:19590554-19590573 | MsG0680031384.01.T01:intron | 45.0% | |
| TATGTAGATAACCCCGCAAG+TGG | - | Chr6:19590011-19590030 | MsG0680031384.01.T01:CDS | 45.0% | |
| TGGTGTGCTTACTTGCAAGA+AGG | - | Chr6:19590701-19590720 | MsG0680031384.01.T01:intron | 45.0% | |
| TGTTTATGGGTTCCCACTTG+CGG | + | Chr6:19590027-19590046 | None:intergenic | 45.0% | |
| TTCAGGGTCTTGAACTGAAG+AGG | + | Chr6:19587854-19587873 | None:intergenic | 45.0% | |
| ! | AGTGATGGAACCAACAAGAG+AGG | + | Chr6:19590673-19590692 | None:intergenic | 45.0% |
| ! | GGATTTTGGACCGTTTCTGA+TGG | - | Chr6:19589339-19589358 | MsG0680031384.01.T01:intron | 45.0% |
| ! | TCCCTTGGCTGTTGATTGTA+GGG | + | Chr6:19590458-19590477 | None:intergenic | 45.0% |
| ! | TGGCCATGTTGCTTGTACAA+TGG | - | Chr6:19591185-19591204 | MsG0680031384.01.T01:exon | 45.0% |
| ! | TGTCGGTTGTTCTCCCAATT+TGG | + | Chr6:19588952-19588971 | None:intergenic | 45.0% |
| ! | TTCCCTTGGCTGTTGATTGT+AGG | + | Chr6:19590459-19590478 | None:intergenic | 45.0% |
| !! | GTAGGAGCATCAATGTCTCT+AGG | - | Chr6:19588857-19588876 | MsG0680031384.01.T01:intron | 45.0% |
| !! | TTATTAAATTATTTACATTT+GGG | - | Chr6:19591115-19591134 | MsG0680031384.01.T01:CDS | 5.0% |
| ATGGAACCAACAAGAGAGGC+TGG | + | Chr6:19590669-19590688 | None:intergenic | 50.0% | |
| GATGCAGTAAACCCTAAGCC+AGG | - | Chr6:19589063-19589082 | MsG0680031384.01.T01:intron | 50.0% | |
| GGCTTGTCCAAAGAATGCCA+AGG | - | Chr6:19589586-19589605 | MsG0680031384.01.T01:CDS | 50.0% | |
| GTTTATGGGTTCCCACTTGC+GGG | + | Chr6:19590026-19590045 | None:intergenic | 50.0% | |
| TTTATGGGTTCCCACTTGCG+GGG | + | Chr6:19590025-19590044 | None:intergenic | 50.0% | |
| ! | TGGACCGTTTCTGATGGTGA+TGG | - | Chr6:19589345-19589364 | MsG0680031384.01.T01:intron | 50.0% |
| GCAAGACCAGCCTCTCTTGT+TGG | - | Chr6:19590660-19590679 | MsG0680031384.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 19587738 | 19591237 | 19587738 | ID=MsG0680031384.01;Name=MsG0680031384.01 |
| Chr6 | mRNA | 19587738 | 19591237 | 19587738 | ID=MsG0680031384.01.T01;Parent=MsG0680031384.01;Name=MsG0680031384.01.T01;_AED=0.48;_eAED=0.48;_QI=52|1|1|1|1|1|3|500|404 |
| Chr6 | exon | 19587738 | 19588598 | 19587738 | ID=MsG0680031384.01.T01:exon:12928;Parent=MsG0680031384.01.T01 |
| Chr6 | exon | 19589368 | 19590114 | 19589368 | ID=MsG0680031384.01.T01:exon:12927;Parent=MsG0680031384.01.T01 |
| Chr6 | exon | 19591079 | 19591237 | 19591079 | ID=MsG0680031384.01.T01:exon:12926;Parent=MsG0680031384.01.T01 |
| Chr6 | five_prime_UTR | 19591186 | 19591237 | 19591186 | ID=MsG0680031384.01.T01:five_prime_utr;Parent=MsG0680031384.01.T01 |
| Chr6 | CDS | 19591079 | 19591185 | 19591079 | ID=MsG0680031384.01.T01:cds;Parent=MsG0680031384.01.T01 |
| Chr6 | CDS | 19589368 | 19590114 | 19589368 | ID=MsG0680031384.01.T01:cds;Parent=MsG0680031384.01.T01 |
| Chr6 | CDS | 19588238 | 19588598 | 19588238 | ID=MsG0680031384.01.T01:cds;Parent=MsG0680031384.01.T01 |
| Chr6 | three_prime_UTR | 19587738 | 19588237 | 19587738 | ID=MsG0680031384.01.T01:three_prime_utr;Parent=MsG0680031384.01.T01 |
| Gene Sequence |
| Protein sequence |
