Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036965.01.T01 | XP_003621884.1 | 95.489 | 133 | 6 | 0 | 3 | 135 | 175 | 307 | 1.59E-88 | 270 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036965.01.T01 | G7KXT7 | 95.489 | 133 | 6 | 0 | 3 | 135 | 175 | 307 | 7.60e-89 | 270 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048817.01 | MsG0780036965.01 | 0.810303 | 1.232780e-50 | 7.404248e-48 |
| MsG0080049148.01 | MsG0780036965.01 | 0.830452 | 2.913081e-55 | 3.070152e-52 |
| MsG0180000139.01 | MsG0780036965.01 | 0.834339 | 3.174526e-56 | 3.756216e-53 |
| MsG0180000152.01 | MsG0780036965.01 | 0.818814 | 1.610923e-52 | 1.218367e-49 |
| MsG0180000444.01 | MsG0780036965.01 | 0.812187 | 4.809124e-51 | 3.037137e-48 |
| MsG0180000828.01 | MsG0780036965.01 | 0.800471 | 1.419070e-48 | 6.612931e-46 |
| MsG0180001141.01 | MsG0780036965.01 | 0.814404 | 1.567715e-51 | 1.050996e-48 |
| MsG0180001172.01 | MsG0780036965.01 | 0.804179 | 2.445922e-49 | 1.252745e-46 |
| MsG0180002458.01 | MsG0780036965.01 | 0.802281 | 6.042675e-49 | 2.948275e-46 |
| MsG0180002482.01 | MsG0780036965.01 | 0.846671 | 1.876514e-59 | 3.254651e-56 |
| MsG0180003651.01 | MsG0780036965.01 | 0.820786 | 5.704919e-53 | 4.557791e-50 |
| MsG0180003952.01 | MsG0780036965.01 | 0.801612 | 8.292697e-49 | 3.977628e-46 |
| MsG0180004463.01 | MsG0780036965.01 | 0.821535 | 3.833975e-53 | 3.127593e-50 |
| MsG0180005659.01 | MsG0780036965.01 | 0.832978 | 6.941088e-56 | 7.884717e-53 |
| MsG0180005851.01 | MsG0780036965.01 | 0.828219 | 1.015032e-54 | 1.002510e-51 |
| MsG0280006406.01 | MsG0780036965.01 | 0.807715 | 4.413723e-50 | 2.476182e-47 |
| MsG0280010776.01 | MsG0780036965.01 | 0.805352 | 1.391331e-49 | 7.344608e-47 |
| MsG0280011387.01 | MsG0780036965.01 | 0.822236 | 2.639238e-53 | 2.196312e-50 |
| MsG0380012122.01 | MsG0780036965.01 | 0.806650 | 7.420467e-50 | 4.049195e-47 |
| MsG0380012661.01 | MsG0780036965.01 | -0.804250 | 2.363882e-49 | 1.212885e-46 |
| MsG0380013178.01 | MsG0780036965.01 | 0.848598 | 5.533215e-60 | 1.020654e-56 |
| MsG0680031650.01 | MsG0780036965.01 | 0.803120 | 4.056597e-49 | 2.021873e-46 |
| MsG0480019498.01 | MsG0780036965.01 | 0.808984 | 2.366981e-50 | 1.372930e-47 |
| MsG0480019795.01 | MsG0780036965.01 | 0.802944 | 4.412199e-49 | 2.189254e-46 |
| MsG0480020136.01 | MsG0780036965.01 | 0.836213 | 1.067565e-56 | 1.336536e-53 |
| MsG0480020874.01 | MsG0780036965.01 | 0.836286 | 1.023130e-56 | 1.283649e-53 |
| MsG0480021164.01 | MsG0780036965.01 | 0.807925 | 3.983532e-50 | 2.247007e-47 |
| MsG0480021536.01 | MsG0780036965.01 | 0.811974 | 5.352155e-51 | 3.360511e-48 |
| MsG0480022222.01 | MsG0780036965.01 | 0.808302 | 3.311628e-50 | 1.886748e-47 |
| MsG0480022707.01 | MsG0780036965.01 | 0.813521 | 2.453839e-51 | 1.606134e-48 |
| MsG0480022795.01 | MsG0780036965.01 | 0.835590 | 1.536101e-56 | 1.886904e-53 |
| MsG0480022877.01 | MsG0780036965.01 | 0.815986 | 6.979847e-52 | 4.885018e-49 |
| MsG0480023814.01 | MsG0780036965.01 | 0.835589 | 1.536340e-56 | 1.887180e-53 |
| MsG0480023968.01 | MsG0780036965.01 | 0.821155 | 4.693115e-53 | 3.788249e-50 |
| MsG0580024390.01 | MsG0780036965.01 | 0.810047 | 1.399382e-50 | 8.349586e-48 |
| MsG0380015164.01 | MsG0780036965.01 | 0.800112 | 1.679325e-48 | 7.754816e-46 |
| MsG0380015466.01 | MsG0780036965.01 | 0.823530 | 1.318310e-53 | 1.138034e-50 |
| MsG0380015566.01 | MsG0780036965.01 | 0.801755 | 7.750962e-49 | 3.731261e-46 |
| MsG0380016847.01 | MsG0780036965.01 | 0.800356 | 1.497647e-48 | 6.959156e-46 |
| MsG0380016910.01 | MsG0780036965.01 | 0.822901 | 1.848411e-53 | 1.567637e-50 |
| MsG0380017680.01 | MsG0780036965.01 | 0.803581 | 3.255835e-49 | 1.642264e-46 |
| MsG0380017746.01 | MsG0780036965.01 | 0.817056 | 4.018691e-52 | 2.896252e-49 |
| MsG0580028044.01 | MsG0780036965.01 | 0.804504 | 2.092457e-49 | 1.080672e-46 |
| MsG0280007164.01 | MsG0780036965.01 | 0.818761 | 1.655506e-52 | 1.250356e-49 |
| MsG0680035704.01 | MsG0780036965.01 | 0.832381 | 9.765833e-56 | 1.089669e-52 |
| MsG0780035948.01 | MsG0780036965.01 | 0.805111 | 1.563100e-49 | 8.200375e-47 |
| MsG0780036190.01 | MsG0780036965.01 | 0.804025 | 2.632739e-49 | 1.343168e-46 |
| MsG0780036964.01 | MsG0780036965.01 | 0.886091 | 4.624689e-72 | 3.256604e-68 |
| MsG0780036965.01 | MsG0780040057.01 | 0.811118 | 8.213416e-51 | 5.041421e-48 |
| MsG0780036965.01 | MsG0780040858.01 | 0.804340 | 2.263931e-49 | 1.164360e-46 |
| MsG0780036965.01 | MsG0780041137.01 | 0.819295 | 1.251924e-52 | 9.595025e-50 |
| MsG0780036965.01 | MsG0780041402.01 | 0.842431 | 2.597283e-58 | 3.937736e-55 |
| MsG0780036965.01 | MsG0780041507.01 | 0.804871 | 1.754642e-49 | 9.149567e-47 |
| MsG0780036965.01 | MsG0880042129.01 | 0.818793 | 1.627997e-52 | 1.230616e-49 |
| MsG0780036965.01 | MsG0880042294.01 | 0.802567 | 5.276427e-49 | 2.593073e-46 |
| MsG0780036965.01 | MsG0880046122.01 | 0.801702 | 7.947226e-49 | 3.820636e-46 |
| MsG0780036965.01 | MsG0880047427.01 | 0.812918 | 3.329388e-51 | 2.143719e-48 |
| MsG0780036965.01 | MsG0880047448.01 | 0.833284 | 5.827450e-56 | 6.680057e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036965.01.T01 | MTR_7g024560 | 95.489 | 133 | 6 | 0 | 3 | 135 | 175 | 307 | 1.93e-92 | 270 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036965.01.T01 | AT3G04020 | 50.382 | 131 | 62 | 2 | 4 | 134 | 112 | 239 | 1.85e-36 | 125 |
| MsG0780036965.01.T01 | AT3G04020 | 50.382 | 131 | 62 | 2 | 4 | 134 | 109 | 236 | 2.23e-36 | 125 |
| MsG0780036965.01.T01 | AT3G04020 | 50.382 | 131 | 62 | 2 | 4 | 134 | 177 | 304 | 5.92e-36 | 125 |
Find 39 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGAATCTGCTAATATT+TGG | 0.219834 | 7:+17236535 | MsG0780036965.01.T01:three_prime_UTR |
| ATTTATTATAACAAAATAAA+AGG | 0.224914 | 7:-17236412 | None:intergenic |
| TCAATCAACTTCGCAGAAAA+TGG | 0.267617 | 7:-17235620 | None:intergenic |
| TTCACCTAATTGATCAGCTT+TGG | 0.322940 | 7:-17235517 | None:intergenic |
| AGATCTTGCACATTTATTGA+TGG | 0.337055 | 7:+17235450 | MsG0780036965.01.T01:CDS |
| ACATCCAAAGCTGATCAATT+AGG | 0.353849 | 7:+17235513 | MsG0780036965.01.T01:CDS |
| CCAACGCCATCCTTTGAAAC+AGG | 0.397576 | 7:-17236235 | None:intergenic |
| GATGTGCTAGCAAAAGTTAC+TGG | 0.434201 | 7:+17236211 | MsG0780036965.01.T01:CDS |
| CTAAAACATGCAACCTTGGT+TGG | 0.437153 | 7:+17236387 | MsG0780036965.01.T01:exon |
| CTGTCAACATCTAGTTCAAA+TGG | 0.447013 | 7:+17236321 | MsG0780036965.01.T01:CDS |
| GATGTGGATGTTGAAGATTT+AGG | 0.465087 | 7:+17235489 | MsG0780036965.01.T01:CDS |
| ATCGAATCCCTTGCGATCAA+CGG | 0.485133 | 7:-17236191 | None:intergenic |
| TGGAAGAGGAGGTCATCAAA+AGG | 0.490710 | 7:+17236341 | MsG0780036965.01.T01:CDS |
| TAAACTAAAACATGCAACCT+TGG | 0.497628 | 7:+17236383 | MsG0780036965.01.T01:exon |
| AGTTACTGGTCCTGTTTCAA+AGG | 0.504240 | 7:+17236225 | MsG0780036965.01.T01:CDS |
| TCATTAAGTTACCTTTGCAT+TGG | 0.518961 | 7:-17235708 | None:intergenic |
| ACTGGTCCTGTTTCAAAGGA+TGG | 0.521951 | 7:+17236229 | MsG0780036965.01.T01:CDS |
| AATACCAATGGACAGAGCTC+AGG | 0.523287 | 7:+17236260 | MsG0780036965.01.T01:CDS |
| GGAAGAGGAGGTCATCAAAA+GGG | 0.526294 | 7:+17236342 | MsG0780036965.01.T01:CDS |
| TTTCTGCGAAGTTGATTGAT+GGG | 0.526838 | 7:+17235624 | MsG0780036965.01.T01:CDS |
| TGCACATTTATTGATGGCCA+TGG | 0.529543 | 7:+17235456 | MsG0780036965.01.T01:CDS |
| TGTAACATCCGTTGATCGCA+AGG | 0.531235 | 7:+17236183 | MsG0780036965.01.T01:CDS |
| CTCTACGCCTAGCTTCACTT+TGG | 0.537449 | 7:-17235652 | None:intergenic |
| TGAACCTGAGCTCTGTCCAT+TGG | 0.545424 | 7:-17236264 | None:intergenic |
| CAGGTTCATGTTCGAGCAAG+AGG | 0.547326 | 7:+17236279 | MsG0780036965.01.T01:CDS |
| ACATCTAGTTCAAATGGAAG+AGG | 0.555304 | 7:+17236327 | MsG0780036965.01.T01:CDS |
| CCTGTTTCAAAGGATGGCGT+TGG | 0.557484 | 7:+17236235 | MsG0780036965.01.T01:CDS |
| AAAAGGGTTTCAGCCTCTAG+TGG | 0.558190 | 7:+17236358 | MsG0780036965.01.T01:CDS |
| GGATTAACCAAAGTGAAGCT+AGG | 0.579660 | 7:+17235645 | MsG0780036965.01.T01:CDS |
| TTGACAGAATGTTTCAACAT+CGG | 0.583310 | 7:-17236305 | None:intergenic |
| ATGGCGTTGGTCAATACCAA+TGG | 0.594282 | 7:+17236248 | MsG0780036965.01.T01:CDS |
| GTAACATCCGTTGATCGCAA+GGG | 0.604514 | 7:+17236184 | MsG0780036965.01.T01:CDS |
| TCTAGTTCAAATGGAAGAGG+AGG | 0.611304 | 7:+17236330 | MsG0780036965.01.T01:CDS |
| TTACATGAACACCAATGCAA+AGG | 0.620843 | 7:+17235697 | MsG0780036965.01.T01:CDS |
| AAACAAAACATAAAAGCACA+AGG | 0.660653 | 7:-17235676 | None:intergenic |
| AAAATAAAAGGATCCAACCA+AGG | 0.671507 | 7:-17236400 | None:intergenic |
| ACATTTATTGATGGCCATGG+TGG | 0.680039 | 7:+17235459 | MsG0780036965.01.T01:CDS |
| AACAAAACATAAAAGCACAA+GGG | 0.697914 | 7:-17235675 | None:intergenic |
| CCACATCAAAAGTACCACCA+TGG | 0.733695 | 7:-17235473 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATGAACTGATATA+TGG | - | Chr7:17236094-17236113 | None:intergenic | 15.0% |
| !!! | TCATATGACTAATATCTTTT+AGG | - | Chr7:17236448-17236467 | None:intergenic | 20.0% |
| ! | ATAGATTGTTTATCTTCGTA+TGG | + | Chr7:17235902-17235921 | MsG0780036965.01.T01:intron | 25.0% |
| ! | CAAAAGAATCTGCTAATATT+TGG | + | Chr7:17236535-17236554 | MsG0780036965.01.T01:three_prime_UTR | 25.0% |
| ! | CATTGATCATTCTTAGATAA+TGG | + | Chr7:17235808-17235827 | MsG0780036965.01.T01:intron | 25.0% |
| ! | TAGAGATGAATACTGATATA+TGG | + | Chr7:17236039-17236058 | MsG0780036965.01.T01:intron | 25.0% |
| !! | AAACAAAACATAAAAGCACA+AGG | - | Chr7:17235679-17235698 | None:intergenic | 25.0% |
| !! | AACAAAACATAAAAGCACAA+GGG | - | Chr7:17235678-17235697 | None:intergenic | 25.0% |
| !!! | TGGTTTTAAATGCATTAGTT+CGG | + | Chr7:17235544-17235563 | MsG0780036965.01.T01:intron | 25.0% |
| AAAATAAAAGGATCCAACCA+AGG | - | Chr7:17236403-17236422 | None:intergenic | 30.0% | |
| AGATCTTGCACATTTATTGA+TGG | + | Chr7:17235450-17235469 | MsG0780036965.01.T01:CDS | 30.0% | |
| ATGAATACTGATATATGGCA+GGG | + | Chr7:17236044-17236063 | MsG0780036965.01.T01:intron | 30.0% | |
| TAAACTAAAACATGCAACCT+TGG | + | Chr7:17236383-17236402 | MsG0780036965.01.T01:exon | 30.0% | |
| TCATTAAGTTACCTTTGCAT+TGG | - | Chr7:17235711-17235730 | None:intergenic | 30.0% | |
| TTGACAGAATGTTTCAACAT+CGG | - | Chr7:17236308-17236327 | None:intergenic | 30.0% | |
| ! | GAACTAATGCATTTAAAACC+AGG | - | Chr7:17235545-17235564 | None:intergenic | 30.0% |
| !! | AGGGTAAATTGTTTTGTCTT+AGG | + | Chr7:17236063-17236082 | MsG0780036965.01.T01:intron | 30.0% |
| !! | ATTTTCCTCTTTTTTCGTCA+AGG | + | Chr7:17236501-17236520 | MsG0780036965.01.T01:three_prime_UTR | 30.0% |
| AAGCTACCATAATCTAGAGA+AGG | - | Chr7:17235987-17236006 | None:intergenic | 35.0% | |
| ACATCCAAAGCTGATCAATT+AGG | + | Chr7:17235513-17235532 | MsG0780036965.01.T01:CDS | 35.0% | |
| ATTCTCCTTGACGAAAAAAG+AGG | - | Chr7:17236509-17236528 | None:intergenic | 35.0% | |
| GATGAATACTGATATATGGC+AGG | + | Chr7:17236043-17236062 | MsG0780036965.01.T01:intron | 35.0% | |
| GATGTGGATGTTGAAGATTT+AGG | + | Chr7:17235489-17235508 | MsG0780036965.01.T01:CDS | 35.0% | |
| TACCATAATCTAGAGAAGGA+TGG | - | Chr7:17235983-17236002 | None:intergenic | 35.0% | |
| TCAATCAACTTCGCAGAAAA+TGG | - | Chr7:17235623-17235642 | None:intergenic | 35.0% | |
| TGTCTTCTTGATTACAAGTG+TGG | + | Chr7:17235775-17235794 | MsG0780036965.01.T01:intron | 35.0% | |
| TTAACAACTAACGAAGCATG+TGG | + | Chr7:17236140-17236159 | MsG0780036965.01.T01:intron | 35.0% | |
| TTACATGAACACCAATGCAA+AGG | + | Chr7:17235697-17235716 | MsG0780036965.01.T01:CDS | 35.0% | |
| TTCACCTAATTGATCAGCTT+TGG | - | Chr7:17235520-17235539 | None:intergenic | 35.0% | |
| TTGTTTATCTTCGTATGGCA+TGG | + | Chr7:17235907-17235926 | MsG0780036965.01.T01:intron | 35.0% | |
| ! | ACATCTAGTTCAAATGGAAG+AGG | + | Chr7:17236327-17236346 | MsG0780036965.01.T01:CDS | 35.0% |
| ! | CTGTCAACATCTAGTTCAAA+TGG | + | Chr7:17236321-17236340 | MsG0780036965.01.T01:CDS | 35.0% |
| ! | GTATTCATCTCTAAGAAGCA+TGG | - | Chr7:17236032-17236051 | None:intergenic | 35.0% |
| ! | GTTGCATAGCATTTTAGATG+CGG | + | Chr7:17235834-17235853 | MsG0780036965.01.T01:intron | 35.0% |
| ! | TTGCATAGCATTTTAGATGC+GGG | + | Chr7:17235835-17235854 | MsG0780036965.01.T01:intron | 35.0% |
| ! | TTTCTGCGAAGTTGATTGAT+GGG | + | Chr7:17235624-17235643 | MsG0780036965.01.T01:CDS | 35.0% |
| !! | AAGCATGTGGTGTTGTATTA+AGG | + | Chr7:17236153-17236172 | MsG0780036965.01.T01:intron | 35.0% |
| !! | TTTTCTGCGAAGTTGATTGA+TGG | + | Chr7:17235623-17235642 | MsG0780036965.01.T01:CDS | 35.0% |
| !!! | GTTTTAGTTTAGTCCACTAG+AGG | - | Chr7:17236374-17236393 | None:intergenic | 35.0% |
| AAGTAACCAATTGCAGGATC+AGG | - | Chr7:17235753-17235772 | None:intergenic | 40.0% | |
| AGTAACCAATTGCAGGATCA+GGG | - | Chr7:17235752-17235771 | None:intergenic | 40.0% | |
| AGTTACTGGTCCTGTTTCAA+AGG | + | Chr7:17236225-17236244 | MsG0780036965.01.T01:CDS | 40.0% | |
| CTAAAACATGCAACCTTGGT+TGG | + | Chr7:17236387-17236406 | MsG0780036965.01.T01:exon | 40.0% | |
| GACATCAAGTAACCAATTGC+AGG | - | Chr7:17235759-17235778 | None:intergenic | 40.0% | |
| GATGTGCTAGCAAAAGTTAC+TGG | + | Chr7:17236211-17236230 | MsG0780036965.01.T01:CDS | 40.0% | |
| GGATTAACCAAAGTGAAGCT+AGG | + | Chr7:17235645-17235664 | MsG0780036965.01.T01:CDS | 40.0% | |
| GTCCATCCTTCTCTAGATTA+TGG | + | Chr7:17235978-17235997 | MsG0780036965.01.T01:intron | 40.0% | |
| TGATCAATTAGGTGAAGACC+TGG | + | Chr7:17235524-17235543 | MsG0780036965.01.T01:intron | 40.0% | |
| ! | ACATTTATTGATGGCCATGG+TGG | + | Chr7:17235459-17235478 | MsG0780036965.01.T01:CDS | 40.0% |
| ! | TCTAGTTCAAATGGAAGAGG+AGG | + | Chr7:17236330-17236349 | MsG0780036965.01.T01:CDS | 40.0% |
| ! | TGCACATTTATTGATGGCCA+TGG | + | Chr7:17235456-17235475 | MsG0780036965.01.T01:CDS | 40.0% |
| AAAAGGGTTTCAGCCTCTAG+TGG | + | Chr7:17236358-17236377 | MsG0780036965.01.T01:CDS | 45.0% | |
| AATACCAATGGACAGAGCTC+AGG | + | Chr7:17236260-17236279 | MsG0780036965.01.T01:CDS | 45.0% | |
| ACTGGTCCTGTTTCAAAGGA+TGG | + | Chr7:17236229-17236248 | MsG0780036965.01.T01:CDS | 45.0% | |
| ATCGAATCCCTTGCGATCAA+CGG | - | Chr7:17236194-17236213 | None:intergenic | 45.0% | |
| GGAAGAGGAGGTCATCAAAA+GGG | + | Chr7:17236342-17236361 | MsG0780036965.01.T01:CDS | 45.0% | |
| GGTAGCTTCTGTAGTATTGC+TGG | + | Chr7:17235999-17236018 | MsG0780036965.01.T01:intron | 45.0% | |
| GTAACATCCGTTGATCGCAA+GGG | + | Chr7:17236184-17236203 | MsG0780036965.01.T01:CDS | 45.0% | |
| TGGAAGAGGAGGTCATCAAA+AGG | + | Chr7:17236341-17236360 | MsG0780036965.01.T01:CDS | 45.0% | |
| TGTAACATCCGTTGATCGCA+AGG | + | Chr7:17236183-17236202 | MsG0780036965.01.T01:CDS | 45.0% | |
| TTACACCCTGATCCTGCAAT+TGG | + | Chr7:17235744-17235763 | MsG0780036965.01.T01:intron | 45.0% | |
| ! | CCATGGTGGTACTTTTGATG+TGG | + | Chr7:17235473-17235492 | MsG0780036965.01.T01:CDS | 45.0% |
| !! | ATGGCGTTGGTCAATACCAA+TGG | + | Chr7:17236248-17236267 | MsG0780036965.01.T01:CDS | 45.0% |
| !! | CCACATCAAAAGTACCACCA+TGG | - | Chr7:17235476-17235495 | None:intergenic | 45.0% |
| !! | ATTTATTATAACAAAATAAA+AGG | - | Chr7:17236415-17236434 | None:intergenic | 5.0% |
| CAGGTTCATGTTCGAGCAAG+AGG | + | Chr7:17236279-17236298 | MsG0780036965.01.T01:CDS | 50.0% | |
| CCTGTTTCAAAGGATGGCGT+TGG | + | Chr7:17236235-17236254 | MsG0780036965.01.T01:CDS | 50.0% | |
| CTCTACGCCTAGCTTCACTT+TGG | - | Chr7:17235655-17235674 | None:intergenic | 50.0% | |
| TGAACCTGAGCTCTGTCCAT+TGG | - | Chr7:17236267-17236286 | None:intergenic | 50.0% | |
| !! | CCAACGCCATCCTTTGAAAC+AGG | - | Chr7:17236238-17236257 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 17235444 | 17236609 | 17235444 | ID=MsG0780036965.01;Name=MsG0780036965.01 |
| Chr7 | mRNA | 17235444 | 17236609 | 17235444 | ID=MsG0780036965.01.T01;Parent=MsG0780036965.01;Name=MsG0780036965.01.T01;_AED=0.49;_eAED=0.49;_QI=0|1|0.66|1|1|1|3|219|135 |
| Chr7 | exon | 17235444 | 17235534 | 17235444 | ID=MsG0780036965.01.T01:exon:11544;Parent=MsG0780036965.01.T01 |
| Chr7 | exon | 17235618 | 17235718 | 17235618 | ID=MsG0780036965.01.T01:exon:11545;Parent=MsG0780036965.01.T01 |
| Chr7 | exon | 17236175 | 17236609 | 17236175 | ID=MsG0780036965.01.T01:exon:11546;Parent=MsG0780036965.01.T01 |
| Chr7 | CDS | 17235444 | 17235534 | 17235444 | ID=MsG0780036965.01.T01:cds;Parent=MsG0780036965.01.T01 |
| Chr7 | CDS | 17235618 | 17235718 | 17235618 | ID=MsG0780036965.01.T01:cds;Parent=MsG0780036965.01.T01 |
| Chr7 | CDS | 17236175 | 17236390 | 17236175 | ID=MsG0780036965.01.T01:cds;Parent=MsG0780036965.01.T01 |
| Chr7 | three_prime_UTR | 17236391 | 17236609 | 17236391 | ID=MsG0780036965.01.T01:three_prime_utr;Parent=MsG0780036965.01.T01 |
| Gene Sequence |
| Protein sequence |
