Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040572.01.T01 | XP_039684024.1 | 70.242 | 289 | 35 | 2 | 1 | 238 | 199 | 487 | 5.79E-124 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040572.01.T01 | G7KVB8 | 70.242 | 289 | 35 | 2 | 1 | 238 | 199 | 487 | 2.76e-124 | 373 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048785.01 | MsG0780040572.01 | 0.802380 | 5.766414e-49 | 2.820688e-46 |
| MsG0080048856.01 | MsG0780040572.01 | 0.814685 | 1.358566e-51 | 9.176677e-49 |
| MsG0080049148.01 | MsG0780040572.01 | 0.800480 | 1.413392e-48 | 6.587943e-46 |
| MsG0180000607.01 | MsG0780040572.01 | 0.824113 | 9.623440e-54 | 8.445116e-51 |
| MsG0180000828.01 | MsG0780040572.01 | 0.807725 | 4.394019e-50 | 2.465730e-47 |
| MsG0180001141.01 | MsG0780040572.01 | 0.824362 | 8.412577e-54 | 7.435139e-51 |
| MsG0180003073.01 | MsG0780040572.01 | 0.817289 | 3.561696e-52 | 2.583224e-49 |
| MsG0180003097.01 | MsG0780040572.01 | 0.809065 | 2.275213e-50 | 1.322598e-47 |
| MsG0180003854.01 | MsG0780040572.01 | 0.819537 | 1.102514e-52 | 8.507991e-50 |
| MsG0180005664.01 | MsG0780040572.01 | 0.810797 | 9.640687e-51 | 5.867270e-48 |
| MsG0280006406.01 | MsG0780040572.01 | 0.807855 | 4.122734e-50 | 2.321256e-47 |
| MsG0780040445.01 | MsG0780040572.01 | 0.811409 | 7.101799e-51 | 4.392879e-48 |
| MsG0780040572.01 | MsG0780041402.01 | 0.802858 | 4.594505e-49 | 2.274840e-46 |
| MsG0780040572.01 | MsG0780041559.01 | 0.818684 | 1.723848e-52 | 1.299107e-49 |
| MsG0780040572.01 | MsG0880042314.01 | 0.800363 | 1.492830e-48 | 6.937988e-46 |
| MsG0780040572.01 | MsG0880042404.01 | 0.808182 | 3.512308e-50 | 1.994847e-47 |
| MsG0780040572.01 | MsG0880043592.01 | 0.814396 | 1.573676e-51 | 1.054786e-48 |
| MsG0780040572.01 | MsG0880045653.01 | 0.832937 | 7.107859e-56 | 8.063838e-53 |
| MsG0780040572.01 | MsG0880046285.01 | 0.818381 | 2.019250e-52 | 1.509241e-49 |
| MsG0780040572.01 | MsG0880046321.01 | 0.802345 | 5.863660e-49 | 2.865603e-46 |
| MsG0780040572.01 | MsG0880047038.01 | 0.802051 | 6.738272e-49 | 3.268410e-46 |
| MsG0780040572.01 | MsG0880047427.01 | 0.811884 | 5.598373e-51 | 3.506469e-48 |
| MsG0780040572.01 | MsG0880047448.01 | 0.809411 | 1.917311e-50 | 1.124956e-47 |
| MsG0780040572.01 | MsG0880047472.01 | 0.800967 | 1.124099e-48 | 5.305130e-46 |
| MsG0780040572.01 | MsG0880047473.01 | 0.803777 | 2.965116e-49 | 1.503063e-46 |
| MsG0280010980.01 | MsG0780040572.01 | 0.801828 | 7.488428e-49 | 3.611749e-46 |
| MsG0280011014.01 | MsG0780040572.01 | 0.800397 | 1.469483e-48 | 6.835188e-46 |
| MsG0280011156.01 | MsG0780040572.01 | 0.810421 | 1.162706e-50 | 7.005082e-48 |
| MsG0380012471.01 | MsG0780040572.01 | 0.803715 | 3.054184e-49 | 1.545710e-46 |
| MsG0380012566.01 | MsG0780040572.01 | 0.813465 | 2.525149e-51 | 1.650334e-48 |
| MsG0380013475.01 | MsG0780040572.01 | 0.806283 | 8.870332e-50 | 4.795544e-47 |
| MsG0380014647.01 | MsG0780040572.01 | 0.822290 | 2.564360e-53 | 2.137407e-50 |
| MsG0380014703.01 | MsG0780040572.01 | 0.805692 | 1.180593e-49 | 6.287197e-47 |
| MsG0680031628.01 | MsG0780040572.01 | 0.804734 | 1.873596e-49 | 9.735269e-47 |
| MsG0680033619.01 | MsG0780040572.01 | 0.829017 | 6.513830e-55 | 6.584197e-52 |
| MsG0680035346.01 | MsG0780040572.01 | 0.816597 | 5.094442e-52 | 3.625549e-49 |
| MsG0480021274.01 | MsG0780040572.01 | 0.800243 | 1.578984e-48 | 7.315866e-46 |
| MsG0480021448.01 | MsG0780040572.01 | 0.800099 | 1.689346e-48 | 7.798615e-46 |
| MsG0480022052.01 | MsG0780040572.01 | -0.822091 | 2.850731e-53 | 2.362450e-50 |
| MsG0480022164.01 | MsG0780040572.01 | 0.811757 | 5.966457e-51 | 3.724522e-48 |
| MsG0480022252.01 | MsG0780040572.01 | 0.808157 | 3.554349e-50 | 2.017430e-47 |
| MsG0480022851.01 | MsG0780040572.01 | 0.822603 | 2.168675e-53 | 1.823919e-50 |
| MsG0480023814.01 | MsG0780040572.01 | 0.804492 | 2.104668e-49 | 1.086657e-46 |
| MsG0580024165.01 | MsG0780040572.01 | 0.830575 | 2.718819e-55 | 2.875844e-52 |
| MsG0580024390.01 | MsG0780040572.01 | 0.822038 | 2.933410e-53 | 2.427257e-50 |
| MsG0580025448.01 | MsG0780040572.01 | 0.814736 | 1.323723e-51 | 8.953745e-49 |
| MsG0380015164.01 | MsG0780040572.01 | 0.813376 | 2.641748e-51 | 1.722312e-48 |
| MsG0480018163.01 | MsG0780040572.01 | 0.815211 | 1.038478e-51 | 7.114804e-49 |
| MsG0480018289.01 | MsG0780040572.01 | 0.802084 | 6.633959e-49 | 3.220531e-46 |
| MsG0580030080.01 | MsG0780040572.01 | 0.800139 | 1.658371e-48 | 7.663449e-46 |
| MsG0280007222.01 | MsG0780040572.01 | 0.843256 | 1.566567e-58 | 2.437045e-55 |
| MsG0280008378.01 | MsG0780040572.01 | 0.800171 | 1.633416e-48 | 7.554067e-46 |
| MsG0680035704.01 | MsG0780040572.01 | 0.817043 | 4.045863e-52 | 2.914796e-49 |
| MsG0780035948.01 | MsG0780040572.01 | 0.814895 | 1.220171e-51 | 8.288459e-49 |
| MsG0780036477.01 | MsG0780040572.01 | 0.816705 | 4.819299e-52 | 3.439753e-49 |
| MsG0780040057.01 | MsG0780040572.01 | 0.803522 | 3.349389e-49 | 1.686854e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040572.01.T01 | MTR_7g093000 | 70.242 | 289 | 35 | 2 | 1 | 238 | 199 | 487 | 7.01e-128 | 373 |
| MsG0780040572.01.T01 | MTR_5g084810 | 32.484 | 157 | 105 | 1 | 82 | 238 | 347 | 502 | 4.80e-19 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040572.01.T01 | AT5G06811 | 36.620 | 284 | 129 | 5 | 3 | 238 | 218 | 498 | 2.37e-44 | 157 |
| MsG0780040572.01.T01 | AT5G06810 | 33.929 | 280 | 138 | 6 | 3 | 238 | 226 | 502 | 1.36e-41 | 149 |
| MsG0780040572.01.T01 | AT4G19650 | 42.038 | 157 | 89 | 1 | 82 | 238 | 357 | 511 | 3.75e-27 | 109 |
| MsG0780040572.01.T01 | AT4G19650 | 42.038 | 157 | 89 | 1 | 82 | 238 | 340 | 494 | 4.43e-27 | 109 |
| MsG0780040572.01.T01 | AT5G45113 | 35.443 | 158 | 97 | 2 | 82 | 238 | 180 | 333 | 4.55e-21 | 91.3 |
Find 55 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAATGGATTGGGCGTTTA+AGG | 0.166970 | 7:-79360130 | MsG0780040572.01.T01:CDS |
| GAAATGAAGAACTGGGTTCT+TGG | 0.309862 | 7:-79360258 | MsG0780040572.01.T01:CDS |
| AGGTAAGGGAGCTGAGCTTC+AGG | 0.325160 | 7:-79360100 | MsG0780040572.01.T01:CDS |
| TTAAGCCTATGGTTGGCTTA+AGG | 0.351833 | 7:-79360227 | MsG0780040572.01.T01:CDS |
| ATCCTCTTGAAATGAAGAAC+TGG | 0.352452 | 7:-79360266 | MsG0780040572.01.T01:CDS |
| TAAGCCTATGGTTGGCTTAA+GGG | 0.353016 | 7:-79360226 | MsG0780040572.01.T01:CDS |
| GGCAAGACACTCTCGATGAT+TGG | 0.410057 | 7:-79360549 | MsG0780040572.01.T01:CDS |
| TTCTTAATCAGAACACAGAT+AGG | 0.440115 | 7:-79360002 | MsG0780040572.01.T01:CDS |
| CAGTCTCACACAGTACTTGC+GGG | 0.440618 | 7:-79360372 | MsG0780040572.01.T01:CDS |
| TATGGTTGGCTTAAGGGATC+TGG | 0.446200 | 7:-79360220 | MsG0780040572.01.T01:CDS |
| TGTGGAAAACACGAAAGAAA+TGG | 0.448745 | 7:-79360145 | MsG0780040572.01.T01:CDS |
| CTTGTTGCGCTTAGGTTATG+TGG | 0.449939 | 7:-79360163 | MsG0780040572.01.T01:CDS |
| GTTTAAGGCGTTCAGAGGTA+AGG | 0.457273 | 7:-79360115 | MsG0780040572.01.T01:CDS |
| GAGATGGAAGCTAAAGAGAT+TGG | 0.461660 | 7:-79360405 | MsG0780040572.01.T01:CDS |
| TGTTAATGTTGAATTTGTTA+AGG | 0.462584 | 7:-79360780 | MsG0780040572.01.T01:CDS |
| CCGCAAGTACTGTGTGAGAC+TGG | 0.465962 | 7:+79360373 | None:intergenic |
| GTTGCTTGAATGTAGGTAAG+AGG | 0.469865 | 7:-79360314 | MsG0780040572.01.T01:CDS |
| CGAGAAACAAGAGGGCAATC+TGG | 0.474907 | 7:+79360498 | None:intergenic |
| AAGACAACTAAGAGTTTGCT+TGG | 0.477982 | 7:-79360336 | MsG0780040572.01.T01:CDS |
| AAAACACGAAAGAAATGGAT+TGG | 0.486098 | 7:-79360140 | MsG0780040572.01.T01:CDS |
| TTGCTTGGTTGCTTGAATGT+AGG | 0.497867 | 7:-79360321 | MsG0780040572.01.T01:CDS |
| ACAGAGTTCTTGTTGCGCTT+AGG | 0.497883 | 7:-79360171 | MsG0780040572.01.T01:CDS |
| TGGAATAAGAGTTAAGCCTA+TGG | 0.513478 | 7:-79360238 | MsG0780040572.01.T01:CDS |
| ACCCAGTTCTTCATTTCAAG+AGG | 0.514113 | 7:+79360264 | None:intergenic |
| TTGAAGAATATTGTTGCAAA+GGG | 0.516097 | 7:-79360746 | MsG0780040572.01.T01:CDS |
| GCTTCTGACTGAAATTGAGA+TGG | 0.523682 | 7:-79360421 | MsG0780040572.01.T01:CDS |
| ACATCACCAACCACAATCCC+TGG | 0.524076 | 7:+79360800 | None:intergenic |
| ATTGTTGCAAAGGGTGGTGA+TGG | 0.524388 | 7:-79360737 | MsG0780040572.01.T01:CDS |
| TGGCTTAAGGGATCTGGAAG+AGG | 0.530600 | 7:-79360214 | MsG0780040572.01.T01:CDS |
| AAACACGAAAGAAATGGATT+GGG | 0.533185 | 7:-79360139 | MsG0780040572.01.T01:CDS |
| GAAGAGGAGAAATCGAGGGT+GGG | 0.535364 | 7:-79360198 | MsG0780040572.01.T01:CDS |
| TGCTGTAAGTCCAGGGATTG+TGG | 0.540265 | 7:-79360810 | MsG0780040572.01.T01:CDS |
| CGAGTTTCCACAGATTTCGA+TGG | 0.543091 | 7:-79360477 | MsG0780040572.01.T01:CDS |
| ATAAGAGTTAAGCCTATGGT+TGG | 0.547914 | 7:-79360234 | MsG0780040572.01.T01:CDS |
| AGATCCCTTAAGCCAACCAT+AGG | 0.552682 | 7:+79360222 | None:intergenic |
| AAGAATATTGTTGCAAAGGG+TGG | 0.552691 | 7:-79360743 | MsG0780040572.01.T01:CDS |
| GCGTCTATGTAGCATACTGC+AGG | 0.554692 | 7:-79360292 | MsG0780040572.01.T01:CDS |
| AAGAGGAGAAATCGAGGGTG+GGG | 0.556838 | 7:-79360197 | MsG0780040572.01.T01:CDS |
| GTTGAAGAATATTGTTGCAA+AGG | 0.570077 | 7:-79360747 | MsG0780040572.01.T01:CDS |
| AATGCTGTTGCTGTAAGTCC+AGG | 0.570515 | 7:-79360818 | MsG0780040572.01.T01:CDS |
| CCAGTCTCACACAGTACTTG+CGG | 0.570636 | 7:-79360373 | MsG0780040572.01.T01:CDS |
| TTTAAGGCGTTCAGAGGTAA+GGG | 0.573608 | 7:-79360114 | MsG0780040572.01.T01:CDS |
| GGAAGAGGAGAAATCGAGGG+TGG | 0.579631 | 7:-79360199 | MsG0780040572.01.T01:CDS |
| ATCTGGAAGAGGAGAAATCG+AGG | 0.593033 | 7:-79360203 | MsG0780040572.01.T01:CDS |
| TCCTCTTGAAATGAAGAACT+GGG | 0.593818 | 7:-79360265 | MsG0780040572.01.T01:CDS |
| TGGGCGTTTAAGGCGTTCAG+AGG | 0.599598 | 7:-79360120 | MsG0780040572.01.T01:CDS |
| TCTTAATCAGAACACAGATA+GGG | 0.611252 | 7:-79360001 | MsG0780040572.01.T01:CDS |
| GCTGAAGACACACCTCAAGT+TGG | 0.614720 | 7:+79360442 | None:intergenic |
| GTAAGTCCAGGGATTGTGGT+TGG | 0.623479 | 7:-79360806 | MsG0780040572.01.T01:CDS |
| GTGTTCTGATTAAGAATCTG+AGG | 0.641643 | 7:+79360009 | None:intergenic |
| GTGGAAACTCGAGAAACAAG+AGG | 0.644988 | 7:+79360489 | None:intergenic |
| TGGAAACTCGAGAAACAAGA+GGG | 0.652528 | 7:+79360490 | None:intergenic |
| ATGCTGTTGCTGTAAGTCCA+GGG | 0.682252 | 7:-79360817 | MsG0780040572.01.T01:CDS |
| AACTTGACCATCGAAATCTG+TGG | 0.684694 | 7:+79360470 | None:intergenic |
| TCTGGAAGAGGAGAAATCGA+GGG | 0.689277 | 7:-79360202 | MsG0780040572.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGATTTTATTGTTAATAC+TGG | - | Chr7:79360721-79360740 | MsG0780040572.01.T01:intron | 15.0% |
| !!! | TGTATTATTTTTGAAGAATC+AGG | - | Chr7:79360220-79360239 | MsG0780040572.01.T01:CDS | 20.0% |
| !!! | TGTTAATGTTGAATTTGTTA+AGG | - | Chr7:79360013-79360032 | MsG0780040572.01.T01:CDS | 20.0% |
| ! | TTGAAGAATATTGTTGCAAA+GGG | - | Chr7:79360047-79360066 | MsG0780040572.01.T01:CDS | 25.0% |
| !!! | ATTATTTTTGAAGAATCAGG+AGG | - | Chr7:79360223-79360242 | MsG0780040572.01.T01:CDS | 25.0% |
| AAAACACGAAAGAAATGGAT+TGG | - | Chr7:79360653-79360672 | MsG0780040572.01.T01:intron | 30.0% | |
| GTTGAAGAATATTGTTGCAA+AGG | - | Chr7:79360046-79360065 | MsG0780040572.01.T01:CDS | 30.0% | |
| TCTTAATCAGAACACAGATA+GGG | - | Chr7:79360792-79360811 | MsG0780040572.01.T01:CDS | 30.0% | |
| TTCTTAATCAGAACACAGAT+AGG | - | Chr7:79360791-79360810 | MsG0780040572.01.T01:CDS | 30.0% | |
| ! | AAACACGAAAGAAATGGATT+GGG | - | Chr7:79360654-79360673 | MsG0780040572.01.T01:intron | 30.0% |
| !!! | GATTGGTTTTTGGTCAAATT+TGG | - | Chr7:79360261-79360280 | MsG0780040572.01.T01:CDS | 30.0% |
| AAGAATATTGTTGCAAAGGG+TGG | - | Chr7:79360050-79360069 | MsG0780040572.01.T01:CDS | 35.0% | |
| ATAAGAGTTAAGCCTATGGT+TGG | - | Chr7:79360559-79360578 | MsG0780040572.01.T01:intron | 35.0% | |
| ATCCTCTTGAAATGAAGAAC+TGG | - | Chr7:79360527-79360546 | MsG0780040572.01.T01:CDS | 35.0% | |
| GATGAGGTTTCTTGTAATTG+GGG | - | Chr7:79360116-79360135 | MsG0780040572.01.T01:CDS | 35.0% | |
| GGATGAGGTTTCTTGTAATT+GGG | - | Chr7:79360115-79360134 | MsG0780040572.01.T01:CDS | 35.0% | |
| GTGTTCTGATTAAGAATCTG+AGG | + | Chr7:79360787-79360806 | None:intergenic | 35.0% | |
| TCCTCTTGAAATGAAGAACT+GGG | - | Chr7:79360528-79360547 | MsG0780040572.01.T01:CDS | 35.0% | |
| TGGAATAAGAGTTAAGCCTA+TGG | - | Chr7:79360555-79360574 | MsG0780040572.01.T01:intron | 35.0% | |
| TGGATGAGGTTTCTTGTAAT+TGG | - | Chr7:79360114-79360133 | MsG0780040572.01.T01:CDS | 35.0% | |
| TGTGGAAAACACGAAAGAAA+TGG | - | Chr7:79360648-79360667 | MsG0780040572.01.T01:intron | 35.0% | |
| ! | AAGACAACTAAGAGTTTGCT+TGG | - | Chr7:79360457-79360476 | MsG0780040572.01.T01:CDS | 35.0% |
| !!! | ATGGTGATTTTGATAGTGGT+TGG | - | Chr7:79360075-79360094 | MsG0780040572.01.T01:CDS | 35.0% |
| !!! | TCAAGTTTTTTGCCAACTTG+AGG | - | Chr7:79360339-79360358 | MsG0780040572.01.T01:CDS | 35.0% |
| !!! | TTGGATTCAGTGGCATTTTT+TGG | - | Chr7:79360094-79360113 | MsG0780040572.01.T01:CDS | 35.0% |
| AACTTGACCATCGAAATCTG+TGG | + | Chr7:79360326-79360345 | None:intergenic | 40.0% | |
| ACCCAGTTCTTCATTTCAAG+AGG | + | Chr7:79360532-79360551 | None:intergenic | 40.0% | |
| GAAATGAAGAACTGGGTTCT+TGG | - | Chr7:79360535-79360554 | MsG0780040572.01.T01:CDS | 40.0% | |
| GAGATGGAAGCTAAAGAGAT+TGG | - | Chr7:79360388-79360407 | MsG0780040572.01.T01:CDS | 40.0% | |
| GCTTCTGACTGAAATTGAGA+TGG | - | Chr7:79360372-79360391 | MsG0780040572.01.T01:CDS | 40.0% | |
| GTTGCTTGAATGTAGGTAAG+AGG | - | Chr7:79360479-79360498 | MsG0780040572.01.T01:CDS | 40.0% | |
| TGGAAACTCGAGAAACAAGA+GGG | + | Chr7:79360306-79360325 | None:intergenic | 40.0% | |
| TGGTTTCAGTGAGAAACAGT+TGG | - | Chr7:79360175-79360194 | MsG0780040572.01.T01:CDS | 40.0% | |
| TTGCTTGGTTGCTTGAATGT+AGG | - | Chr7:79360472-79360491 | MsG0780040572.01.T01:CDS | 40.0% | |
| TTGTGCTTGCTTTCGAATGT+TGG | - | Chr7:79360155-79360174 | MsG0780040572.01.T01:CDS | 40.0% | |
| ! | TTTAAGGCGTTCAGAGGTAA+GGG | - | Chr7:79360679-79360698 | MsG0780040572.01.T01:intron | 40.0% |
| !! | AGAAATGGATTGGGCGTTTA+AGG | - | Chr7:79360663-79360682 | MsG0780040572.01.T01:intron | 40.0% |
| !! | GGTGATGGTGATTTTGATAG+TGG | - | Chr7:79360071-79360090 | MsG0780040572.01.T01:CDS | 40.0% |
| !! | TAAGCCTATGGTTGGCTTAA+GGG | - | Chr7:79360567-79360586 | MsG0780040572.01.T01:intron | 40.0% |
| !! | TTAAGCCTATGGTTGGCTTA+AGG | - | Chr7:79360566-79360585 | MsG0780040572.01.T01:intron | 40.0% |
| !! | TTGATAGTGGTTGGATTCAG+TGG | - | Chr7:79360084-79360103 | MsG0780040572.01.T01:CDS | 40.0% |
| !!! | CACTCTCGATGATTGGTTTT+TGG | - | Chr7:79360251-79360270 | MsG0780040572.01.T01:CDS | 40.0% |
| !!! | TCAGTGGCATTTTTTGGATG+AGG | - | Chr7:79360100-79360119 | MsG0780040572.01.T01:CDS | 40.0% |
| AATGCTGTTGCTGTAAGTCC+AGG | - | Chr7:79359975-79359994 | MsG0780040572.01.T01:CDS | 45.0% | |
| ACAGAGTTCTTGTTGCGCTT+AGG | - | Chr7:79360622-79360641 | MsG0780040572.01.T01:intron | 45.0% | |
| AGATCCCTTAAGCCAACCAT+AGG | + | Chr7:79360574-79360593 | None:intergenic | 45.0% | |
| ATCTGGAAGAGGAGAAATCG+AGG | - | Chr7:79360590-79360609 | MsG0780040572.01.T01:intron | 45.0% | |
| ATGCTGTTGCTGTAAGTCCA+GGG | - | Chr7:79359976-79359995 | MsG0780040572.01.T01:CDS | 45.0% | |
| ATTGTTGCAAAGGGTGGTGA+TGG | - | Chr7:79360056-79360075 | MsG0780040572.01.T01:CDS | 45.0% | |
| CAGTTGGCTGAGATTATTCG+TGG | - | Chr7:79360191-79360210 | MsG0780040572.01.T01:CDS | 45.0% | |
| CGAGTTTCCACAGATTTCGA+TGG | - | Chr7:79360316-79360335 | MsG0780040572.01.T01:CDS | 45.0% | |
| CTTGTTGCGCTTAGGTTATG+TGG | - | Chr7:79360630-79360649 | MsG0780040572.01.T01:intron | 45.0% | |
| GTGGAAACTCGAGAAACAAG+AGG | + | Chr7:79360307-79360326 | None:intergenic | 45.0% | |
| TCTGGAAGAGGAGAAATCGA+GGG | - | Chr7:79360591-79360610 | MsG0780040572.01.T01:intron | 45.0% | |
| ! | GTTTAAGGCGTTCAGAGGTA+AGG | - | Chr7:79360678-79360697 | MsG0780040572.01.T01:intron | 45.0% |
| !! | TATGGTTGGCTTAAGGGATC+TGG | - | Chr7:79360573-79360592 | MsG0780040572.01.T01:intron | 45.0% |
| AAGAGGAGAAATCGAGGGTG+GGG | - | Chr7:79360596-79360615 | MsG0780040572.01.T01:intron | 50.0% | |
| ACATCACCAACCACAATCCC+TGG | + | Chr7:79359996-79360015 | None:intergenic | 50.0% | |
| CAGTCTCACACAGTACTTGC+GGG | - | Chr7:79360421-79360440 | MsG0780040572.01.T01:CDS | 50.0% | |
| CCAGTCTCACACAGTACTTG+CGG | - | Chr7:79360420-79360439 | MsG0780040572.01.T01:CDS | 50.0% | |
| CGAGAAACAAGAGGGCAATC+TGG | + | Chr7:79360298-79360317 | None:intergenic | 50.0% | |
| GAAGAGGAGAAATCGAGGGT+GGG | - | Chr7:79360595-79360614 | MsG0780040572.01.T01:intron | 50.0% | |
| GCGTCTATGTAGCATACTGC+AGG | - | Chr7:79360501-79360520 | MsG0780040572.01.T01:CDS | 50.0% | |
| GCTGAAGACACACCTCAAGT+TGG | + | Chr7:79360354-79360373 | None:intergenic | 50.0% | |
| GGCAAGACACTCTCGATGAT+TGG | - | Chr7:79360244-79360263 | MsG0780040572.01.T01:CDS | 50.0% | |
| GTAAGTCCAGGGATTGTGGT+TGG | - | Chr7:79359987-79360006 | MsG0780040572.01.T01:CDS | 50.0% | |
| TGCTGTAAGTCCAGGGATTG+TGG | - | Chr7:79359983-79360002 | MsG0780040572.01.T01:CDS | 50.0% | |
| TGGCTTAAGGGATCTGGAAG+AGG | - | Chr7:79360579-79360598 | MsG0780040572.01.T01:intron | 50.0% | |
| AGGTAAGGGAGCTGAGCTTC+AGG | - | Chr7:79360693-79360712 | MsG0780040572.01.T01:intron | 55.0% | |
| GGAAGAGGAGAAATCGAGGG+TGG | - | Chr7:79360594-79360613 | MsG0780040572.01.T01:intron | 55.0% | |
| ! | CCGCAAGTACTGTGTGAGAC+TGG | + | Chr7:79360423-79360442 | None:intergenic | 55.0% |
| ! | TGGGCGTTTAAGGCGTTCAG+AGG | - | Chr7:79360673-79360692 | MsG0780040572.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 79359975 | 79360840 | 79359975 | ID=MsG0780040572.01;Name=MsG0780040572.01 |
| Chr7 | mRNA | 79359975 | 79360840 | 79359975 | ID=MsG0780040572.01.T01;Parent=MsG0780040572.01;Name=MsG0780040572.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|0.5|2|0|238 |
| Chr7 | exon | 79360723 | 79360840 | 79360723 | ID=MsG0780040572.01.T01:exon:16279;Parent=MsG0780040572.01.T01 |
| Chr7 | exon | 79359975 | 79360573 | 79359975 | ID=MsG0780040572.01.T01:exon:16278;Parent=MsG0780040572.01.T01 |
| Chr7 | CDS | 79360723 | 79360840 | 79360723 | ID=MsG0780040572.01.T01:cds;Parent=MsG0780040572.01.T01 |
| Chr7 | CDS | 79359975 | 79360573 | 79359975 | ID=MsG0780040572.01.T01:cds;Parent=MsG0780040572.01.T01 |
| Gene Sequence |
| Protein sequence |
