AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039937.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039937.01.T01 MTR_7g081660 95.276 381 12 2 1 379 1 377 0.0 711
MsG0780039937.01.T01 MTR_8g006960 65.296 389 105 9 1 378 1 370 2.28e-114 338
MsG0780039937.01.T01 MTR_8g007425 39.080 174 43 4 201 372 35 147 8.54e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039937.01.T01 AT4G17520 45.874 412 136 14 1 378 1 359 4.12e-89 273
MsG0780039937.01.T01 AT4G16830 49.495 396 143 12 1 380 1 355 1.27e-62 205
MsG0780039937.01.T01 AT4G16830 62.009 229 77 6 154 380 45 265 3.17e-55 182
MsG0780039937.01.T01 AT4G16830 63.303 218 71 5 164 380 136 345 2.09e-54 183
MsG0780039937.01.T01 AT5G47210 44.072 388 176 10 1 378 1 357 4.64e-46 161
MsG0780039937.01.T01 AT5G47210 44.037 327 146 8 1 317 1 300 1.93e-36 134
MsG0780039937.01.T01 AT5G47210 39.259 270 131 5 1 261 1 246 2.40e-14 73.6

Find 191 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGCGTCCTCCTTCATTTC+TGG 0.193263 7:+70739448 None:intergenic
AAAATGTCAAACGCGATAAA+AGG 0.219849 7:+70736904 None:intergenic
TACTGAAATCTTCGCTAAAT+TGG 0.251228 7:-70738016 MsG0780039937.01.T01:intron
GGAAAAGAACTATTACTAAT+TGG 0.258411 7:-70737011 MsG0780039937.01.T01:three_prime_UTR
GAATGAAGGTGAAAAGAATT+TGG 0.268001 7:-70738820 MsG0780039937.01.T01:CDS
TCAACAAAGAAATACCTTCT+TGG 0.271936 7:+70737832 None:intergenic
GACAATTTGTTCCCTGCCTC+TGG 0.281662 7:-70739311 MsG0780039937.01.T01:CDS
AAGGTGCTGGAAGGGGTAAC+TGG 0.292242 7:-70739000 MsG0780039937.01.T01:CDS
ATGGTTTAAAATGTAAATTT+AGG 0.296329 7:-70736967 MsG0780039937.01.T01:three_prime_UTR
ATAACTCAGGTGGGCGCGGC+AGG 0.304314 7:-70737229 MsG0780039937.01.T01:CDS
AACCATAAAATAAAATTAAC+AGG 0.305880 7:+70736984 None:intergenic
GTGGCGTTCAAATGTTCTTC+GGG 0.315882 7:+70739151 None:intergenic
CAAACGCGATAAAAGGATAA+AGG 0.330249 7:+70736911 None:intergenic
TGGACATTTACCTTGTCTTC+AGG 0.330576 7:+70738717 None:intergenic
CGTGGAGGTGACCGCGGATT+TGG 0.332778 7:-70739380 MsG0780039937.01.T01:CDS
GGACGCGGTGGTCGTGGATT+TGG 0.345496 7:-70739434 MsG0780039937.01.T01:CDS
GGTGGGCGCGGCAGGGGACG+TGG 0.346207 7:-70737221 MsG0780039937.01.T01:CDS
CGAGGAGGTGACCGTGGGTT+TGG 0.347074 7:-70739407 MsG0780039937.01.T01:CDS
GGCAACAAAGCAGGCTTGTT+AGG 0.361984 7:+70740715 None:intergenic
GCAGGAGGGGTTGGCTTAGA+AGG 0.366117 7:+70740694 None:intergenic
GAAAGCTGCTGTCAAGGAAC+AGG 0.382526 7:-70740743 MsG0780039937.01.T01:CDS
GGTCGTGGAGGTCGTGGTTT+CGG 0.384827 7:-70739353 MsG0780039937.01.T01:CDS
TGTGGCGTTCAAATGTTCTT+CGG 0.385315 7:+70739150 None:intergenic
GAAAGTCATCACAACATTCA+TGG 0.386632 7:+70736533 None:intergenic
AACTCAGGTGGGCGCGGCAG+GGG 0.400573 7:-70737227 MsG0780039937.01.T01:CDS
CTCTGGAGCCCCTGAAAACC+AGG 0.412435 7:-70739294 MsG0780039937.01.T01:CDS
AATGAAGGTGAAAAGAATTT+GGG 0.413679 7:-70738819 MsG0780039937.01.T01:CDS
CGCGGATTTGGTGGTGGTCG+TGG 0.419320 7:-70739368 MsG0780039937.01.T01:CDS
ATTGTCTTTCTTGCACGATA+AGG 0.419547 7:+70738038 None:intergenic
CCCGGGCATTTCCCTACCTT+GGG 0.419782 7:-70737113 MsG0780039937.01.T01:CDS
TGTGGGGAAAATAAGTTAAA+TGG 0.420875 7:-70736763 MsG0780039937.01.T01:three_prime_UTR
CGCCACAGTGGCACTGGGCG+AGG 0.422652 7:-70739134 MsG0780039937.01.T01:CDS
TTTGAACGCCACAGTGGCAC+TGG 0.427150 7:-70739140 MsG0780039937.01.T01:CDS
ACCAATCCATTTGATTTGCT+TGG 0.429081 7:-70740841 MsG0780039937.01.T01:CDS
GATGGAGATCGGAGAGAGAA+GGG 0.431263 7:+70740980 None:intergenic
TCCCGGGCATTTCCCTACCT+TGG 0.433639 7:-70737114 MsG0780039937.01.T01:CDS
GACCTGTCTCCTTCTTCAAC+AGG 0.434497 7:+70739269 None:intergenic
TAGTGGGATTCTCCTTCAGC+TGG 0.436928 7:+70737251 None:intergenic
TTCTCTCTCTCATTGCGGCT+AGG 0.437746 7:-70741038 MsG0780039937.01.T01:five_prime_UTR
TACCAAGTGTCGGTAGAATC+AGG 0.438030 7:-70736662 MsG0780039937.01.T01:three_prime_UTR
TCTCTCTCTCATTGCGGCTA+GGG 0.441088 7:-70741037 MsG0780039937.01.T01:five_prime_UTR
GCAACATCAGTTTCAGCTGC+AGG 0.441395 7:+70738786 None:intergenic
TTTGTTCTAGGGAGCTGATA+AGG 0.443719 7:-70737891 MsG0780039937.01.T01:intron
TGCTGTGGTTGGTATAATGT+GGG 0.448191 7:-70736726 MsG0780039937.01.T01:three_prime_UTR
CGCGCCCACCTGAGTTATAG+TGG 0.448575 7:+70737234 None:intergenic
GTTAAAATCATTTACATGAA+AGG 0.448866 7:+70736497 None:intergenic
GAAGGAGGACGCGGTGGTCG+TGG 0.449410 7:-70739440 MsG0780039937.01.T01:CDS
GGCAGGGGACGTGGTGGCCG+TGG 0.451352 7:-70737212 MsG0780039937.01.T01:CDS
GACCGTGGGTTTGGTGGACG+TGG 0.453802 7:-70739398 MsG0780039937.01.T01:CDS
TAAGCCAACCCCTCCTGCTC+AGG 0.454092 7:-70740689 MsG0780039937.01.T01:CDS
ACAGCAGCTTTCTTAGCAGC+AGG 0.455364 7:+70740754 None:intergenic
GATTTCAAGCGTGAAGGTGC+TGG 0.455572 7:-70739013 MsG0780039937.01.T01:CDS
AAACGCGATAAAAGGATAAA+GGG 0.457429 7:+70736912 None:intergenic
CTCCTTCTTCAACAGGACCC+TGG 0.458082 7:+70739276 None:intergenic
CATTCTATTAAAAGTGTTGT+GGG 0.460687 7:-70736780 MsG0780039937.01.T01:three_prime_UTR
GGTACACGAGGAGGAGGAGG+AGG 0.464562 7:-70737191 MsG0780039937.01.T01:CDS
TCTAAAGACTGAAGAGAGAA+AGG 0.467642 7:-70738091 MsG0780039937.01.T01:CDS
TTTCTTCAGCTTCATTGGTA+GGG 0.467650 7:+70738745 None:intergenic
AGATGGAGATCGGAGAGAGA+AGG 0.470359 7:+70740979 None:intergenic
TACCAATGAAGCTGAAGAAA+AGG 0.470749 7:-70738742 MsG0780039937.01.T01:CDS
GGGCGCGGCAGGGGACGTGG+TGG 0.473954 7:-70737218 MsG0780039937.01.T01:CDS
TAACTCAGGTGGGCGCGGCA+GGG 0.474153 7:-70737228 MsG0780039937.01.T01:CDS
AGGGCTATCCTTGTTCCCTT+CGG 0.478993 7:+70738764 None:intergenic
TTGAAATTCTCTGCTGTGGT+TGG 0.480508 7:-70736737 MsG0780039937.01.T01:three_prime_UTR
TAGGACAGATATGCGCGAAA+AGG 0.481183 7:+70737078 None:intergenic
CACTATAACTCAGGTGGGCG+CGG 0.482966 7:-70737233 MsG0780039937.01.T01:CDS
GGCTTAGAAGGCAACAAAGC+AGG 0.486050 7:+70740706 None:intergenic
AGGTGCTGGAAGGGGTAACT+GGG 0.486716 7:-70738999 MsG0780039937.01.T01:CDS
AGGACAGATATGCGCGAAAA+GGG 0.488257 7:+70737079 None:intergenic
GGCCGTGGTACACGAGGAGG+AGG 0.488513 7:-70737197 MsG0780039937.01.T01:CDS
GTGAGGGAGTCCAGAAATGA+AGG 0.488997 7:-70739458 MsG0780039937.01.T01:CDS
CGTGGTACACGAGGAGGAGG+AGG 0.493384 7:-70737194 MsG0780039937.01.T01:CDS
GCTCCATCCATTGAAGATCC+CGG 0.493448 7:-70737131 MsG0780039937.01.T01:CDS
GATAAAAGGATAAAGGGAAA+TGG 0.493647 7:+70736918 None:intergenic
GGTGGTGGTCGTGGAGGTCG+TGG 0.494148 7:-70739359 MsG0780039937.01.T01:CDS
CTGCTGTGGTTGGTATAATG+TGG 0.498774 7:-70736727 MsG0780039937.01.T01:three_prime_UTR
CCAGCCTGAGCAGGAGGGGT+TGG 0.499463 7:+70740685 None:intergenic
CGCGGTGGTCGTGGATTTGG+TGG 0.500708 7:-70739431 MsG0780039937.01.T01:CDS
CCATCGTACGAAGGAGAAGA+TGG 0.502846 7:+70740962 None:intergenic
TCATCACCAAGCAAATCAAA+TGG 0.503221 7:+70740835 None:intergenic
GAAATGCCCGGGATCTTCAA+TGG 0.504140 7:+70737124 None:intergenic
CTCCATCCATTGAAGATCCC+GGG 0.514613 7:-70737130 MsG0780039937.01.T01:CDS
ACCAAGCAAATCAAATGGAT+TGG 0.515642 7:+70740840 None:intergenic
CAAGGAAGAGAAAGCCAAGA+AGG 0.520620 7:-70737846 MsG0780039937.01.T01:intron
CGAGCGTGATGGTTGAAACT+AGG 0.522480 7:+70740927 None:intergenic
GGAGGTGACCGTGGGTTTGG+TGG 0.523532 7:-70739404 MsG0780039937.01.T01:CDS
TTCACTTGGCACCCAAGGTA+GGG 0.526649 7:+70737102 None:intergenic
TGTTGTTTCAAAGAAGAAGA+TGG 0.527109 7:-70740869 MsG0780039937.01.T01:exon
TCAGCAACGATGAGCTGAGA+AGG 0.527576 7:+70740802 None:intergenic
AACCAGGGTCCTGTTGAAGA+AGG 0.528755 7:-70739278 MsG0780039937.01.T01:CDS
GTTCACTTGGCACCCAAGGT+AGG 0.529838 7:+70737101 None:intergenic
CAAGCGTGAAGGTGCTGGAA+GGG 0.532787 7:-70739008 MsG0780039937.01.T01:CDS
CTTGCACGATAAGGCCTGCA+TGG 0.533336 7:+70738047 None:intergenic
AGCCTGATTCTACCGACACT+TGG 0.534664 7:+70736660 None:intergenic
GGAGGTGACCGCGGATTTGG+TGG 0.534801 7:-70739377 MsG0780039937.01.T01:CDS
GGAGGAGGAGGAGGTTTCCG+TGG 0.535610 7:-70737176 MsG0780039937.01.T01:CDS
ACCCAAGGTAGGGAAATGCC+CGG 0.536594 7:+70737112 None:intergenic
TGCTAAGAAAGCTGCTGTCA+AGG 0.537457 7:-70740749 MsG0780039937.01.T01:CDS
GTGGTTGAAATTCTCTGCTG+TGG 0.538844 7:-70736741 MsG0780039937.01.T01:three_prime_UTR
CATTGCTGTACGAATTTCCA+CGG 0.539202 7:+70737159 None:intergenic
CAAATCAAATGGATTGGTAG+TGG 0.541449 7:+70740846 None:intergenic
GCATTCTATTAAAAGTGTTG+TGG 0.542203 7:-70736781 MsG0780039937.01.T01:three_prime_UTR
GGAGGAATATGAGAAAGTGC+TGG 0.543378 7:-70738139 MsG0780039937.01.T01:CDS
GGTTTCAACAATGGTGATGC+TGG 0.543510 7:-70739188 MsG0780039937.01.T01:CDS
AGTAACTAACCAGCCTGAGC+AGG 0.543544 7:+70740676 None:intergenic
TTTCAGGGGCTCCAGAGGCA+GGG 0.547403 7:+70739300 None:intergenic
CCAACCCCTCCTGCTCAGGC+TGG 0.547538 7:-70740685 MsG0780039937.01.T01:intron
GGTGACCGCGGATTTGGTGG+TGG 0.550256 7:-70739374 MsG0780039937.01.T01:CDS
TGCCCGGGATCTTCAATGGA+TGG 0.552833 7:+70737128 None:intergenic
AACTAACCAGCCTGAGCAGG+AGG 0.555781 7:+70740679 None:intergenic
GCCACAGTGGCACTGGGCGA+GGG 0.557182 7:-70739133 MsG0780039937.01.T01:intron
ATGCGCGAAAAGGGTTCACT+TGG 0.557544 7:+70737088 None:intergenic
GTCCTGTTGAAGAAGGAGAC+AGG 0.558378 7:-70739271 MsG0780039937.01.T01:CDS
TGATGTTGCCGAAGGGAACA+AGG 0.558851 7:-70738772 MsG0780039937.01.T01:CDS
AAGCGTGAAGGTGCTGGAAG+GGG 0.559364 7:-70739007 MsG0780039937.01.T01:CDS
GGAGAATCCCACTATAACTC+AGG 0.564061 7:-70737242 MsG0780039937.01.T01:CDS
GGATCTTCAATGGATGGAGC+AGG 0.564280 7:+70737134 None:intergenic
CTAACCAGCCTGAGCAGGAG+GGG 0.565343 7:+70740681 None:intergenic
GGTGGACGAGGAGGTGACCG+TGG 0.565956 7:-70739413 MsG0780039937.01.T01:CDS
CGTGGTGGCCGTGGTACACG+AGG 0.566001 7:-70737203 MsG0780039937.01.T01:CDS
AAGGGTTCACTTGGCACCCA+AGG 0.569458 7:+70737097 None:intergenic
TGGTTATTAGGAAATGACTC+TGG 0.572820 7:-70738160 MsG0780039937.01.T01:intron
GGTCGTGGATTTGGTGGACG+AGG 0.574276 7:-70739425 MsG0780039937.01.T01:CDS
AATGGTGATGCTGGTGAAGA+GGG 0.574768 7:-70739179 MsG0780039937.01.T01:CDS
TCCAGAAATGAAGGAGGACG+CGG 0.577100 7:-70739449 MsG0780039937.01.T01:CDS
TCCTCAGAAAGACGTAGCTA+TGG 0.578694 7:-70739248 MsG0780039937.01.T01:CDS
TGTCATCATTTGAGTACTCA+CGG 0.582228 7:+70739330 None:intergenic
GAGTTTCTGAAGCCAGCTGA+AGG 0.586502 7:-70737263 MsG0780039937.01.T01:CDS
ATAAAGGGAAATGGCTGCAA+GGG 0.587652 7:+70736927 None:intergenic
TTGAACGCCACAGTGGCACT+GGG 0.588094 7:-70739139 MsG0780039937.01.T01:CDS
CCACGACGACCTCCGCGGTA+GGG 0.589657 7:+70739212 None:intergenic
TCAAGCGTGAAGGTGCTGGA+AGG 0.590971 7:-70739009 MsG0780039937.01.T01:CDS
CCCAAGGTAGGGAAATGCCC+GGG 0.593676 7:+70737113 None:intergenic
CCATCTTCTCCTTCGTACGA+TGG 0.594623 7:-70740962 MsG0780039937.01.T01:five_prime_UTR
TCCACGACGACCTCCGCGGT+AGG 0.597333 7:+70739211 None:intergenic
TCAGAAAGACGTAGCTATGG+TGG 0.597415 7:-70739245 MsG0780039937.01.T01:CDS
AGTGCTGGAAGAGAAAAGAA+AGG 0.598692 7:-70738124 MsG0780039937.01.T01:CDS
TGGCGTTCAAATGTTCTTCG+GGG 0.599479 7:+70739152 None:intergenic
GATAAAGGGAAATGGCTGCA+AGG 0.601288 7:+70736926 None:intergenic
GAATCCCACTATAACTCAGG+TGG 0.602838 7:-70737239 MsG0780039937.01.T01:CDS
CAATGGTGATGCTGGTGAAG+AGG 0.603465 7:-70739180 MsG0780039937.01.T01:CDS
CTCCTCCTCCTCGTGTACCA+CGG 0.603887 7:+70737195 None:intergenic
ACGAAGGAGAAGATGGAGAT+CGG 0.604142 7:+70740969 None:intergenic
GTGGACGAGGAGGTGACCGT+GGG 0.604172 7:-70739412 MsG0780039937.01.T01:CDS
CCCTACCGCGGAGGTCGTCG+TGG 0.605182 7:-70739212 MsG0780039937.01.T01:CDS
CTCCACGTCCACCAAACCCA+CGG 0.606495 7:+70739396 None:intergenic
CAGCAACGATGAGCTGAGAA+GGG 0.614728 7:+70740803 None:intergenic
GCGCCCACCTGAGTTATAGT+GGG 0.615414 7:+70737235 None:intergenic
GCAGCTTTCTTAGCAGCAGG+AGG 0.616728 7:+70740757 None:intergenic
CGTGGGTTTGGTGGACGTGG+AGG 0.619035 7:-70739395 MsG0780039937.01.T01:CDS
AGAAAAGGAGCCTGAAGACA+AGG 0.621218 7:-70738727 MsG0780039937.01.T01:intron
TAAAGCATTTGAAACCATGC+AGG 0.622156 7:-70738061 MsG0780039937.01.T01:CDS
CGTCGTGGAGGTTTCAACAA+TGG 0.622285 7:-70739197 MsG0780039937.01.T01:CDS
CGTGGATTTGGTGGACGAGG+AGG 0.623293 7:-70739422 MsG0780039937.01.T01:CDS
AGTTTAACACACGAGCGTGA+TGG 0.627211 7:+70740916 None:intergenic
ACTGAAGAAGTCATGAATGA+AGG 0.628842 7:-70738834 MsG0780039937.01.T01:CDS
GGTGGACGTGGAGGTGACCG+CGG 0.632941 7:-70739386 MsG0780039937.01.T01:CDS
TCTCTTTCTCTCTCTCATTG+CGG 0.633265 7:-70741043 MsG0780039937.01.T01:five_prime_UTR
CTGAAACTGATGTTGCCGAA+GGG 0.636057 7:-70738779 MsG0780039937.01.T01:CDS
ACTAACCAGCCTGAGCAGGA+GGG 0.639448 7:+70740680 None:intergenic
TTATTAGGAAATGACTCTGG+AGG 0.640664 7:-70738157 MsG0780039937.01.T01:intron
AGGGAGTCCAGAAATGAAGG+AGG 0.644058 7:-70739455 MsG0780039937.01.T01:CDS
AAAGCTGCTGTCAAGGAACA+GGG 0.644173 7:-70740742 MsG0780039937.01.T01:CDS
ACCATAGCTACGTCTTTCTG+AGG 0.648642 7:+70739247 None:intergenic
ATTCTATTAAAAGTGTTGTG+GGG 0.648703 7:-70736779 MsG0780039937.01.T01:three_prime_UTR
ACCCTCGCCCAGTGCCACTG+TGG 0.651721 7:+70739132 None:intergenic
CACGACCACCACCAAATCCG+CGG 0.653393 7:+70739369 None:intergenic
AATCCCACTATAACTCAGGT+GGG 0.655235 7:-70737238 MsG0780039937.01.T01:CDS
GCTGAAACTGATGTTGCCGA+AGG 0.656153 7:-70738780 MsG0780039937.01.T01:CDS
TACCGCGGAGGTCGTCGTGG+AGG 0.657139 7:-70739209 MsG0780039937.01.T01:CDS
TCTGGAGCCCCTGAAAACCA+GGG 0.658814 7:-70739293 MsG0780039937.01.T01:CDS
AGAAACGATTTCAAGCGTGA+AGG 0.659209 7:-70739019 MsG0780039937.01.T01:CDS
GGATTTGGTGGTGGTCGTGG+AGG 0.659837 7:-70739365 MsG0780039937.01.T01:CDS
TTTCGGGGAAATGGTTGCGG+GGG 0.660751 7:-70736883 MsG0780039937.01.T01:three_prime_UTR
AGAAATGAAGGAGGACGCGG+TGG 0.665174 7:-70739446 MsG0780039937.01.T01:CDS
GCGCAAAGAGGCTTATGACA+AGG 0.666794 7:-70737864 MsG0780039937.01.T01:CDS
GGGGAAAATAAGTTAAATGG+TGG 0.667733 7:-70736760 MsG0780039937.01.T01:three_prime_UTR
GCTGTGGTTGGTATAATGTG+GGG 0.668701 7:-70736725 MsG0780039937.01.T01:three_prime_UTR
GGTGCTGGAAGGGGTAACTG+GGG 0.673151 7:-70738998 MsG0780039937.01.T01:CDS
CCACGAGGTCCCTACCGCGG+AGG 0.677303 7:-70739221 MsG0780039937.01.T01:CDS
TGATAAGGATAAGCGCAAAG+AGG 0.681220 7:-70737876 MsG0780039937.01.T01:CDS
TTTGCTTGGTGATGACGCTG+AGG 0.688473 7:-70740827 MsG0780039937.01.T01:CDS
GGACCACGAGGTCCCTACCG+CGG 0.694021 7:-70739224 MsG0780039937.01.T01:CDS
GGTGGCCGTGGTACACGAGG+AGG 0.702691 7:-70737200 MsG0780039937.01.T01:CDS
TGAAGTGAGAGAGAAATGCA+CGG 0.714734 7:+70741077 None:intergenic
GCATAGTTACCATCGTACGA+AGG 0.715688 7:+70740953 None:intergenic
CCTCCGCGGTAGGGACCTCG+TGG 0.723060 7:+70739221 None:intergenic
CGTAGCTATGGTGGACCACG+AGG 0.724280 7:-70739236 MsG0780039937.01.T01:CDS
AACCTCCACGACGACCTCCG+CGG 0.738924 7:+70739207 None:intergenic
AGAACATTTGAACGCCACAG+TGG 0.751248 7:-70739146 MsG0780039937.01.T01:CDS
ACAGCAAAGACAATAACACG+CGG 0.802882 7:+70740889 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAATAAATTCAAAATTA+TGG + Chr7:70738996-70739015 None:intergenic 10.0%
!! AACCATAAAATAAAATTAAC+AGG + Chr7:70740594-70740613 None:intergenic 15.0%
!! ACAAAATCAATTCAAAATTA+TGG + Chr7:70739157-70739176 None:intergenic 15.0%
!! TTATATATACAAAGTAACAA+GGG + Chr7:70739778-70739797 None:intergenic 15.0%
!! TTTGTTTACATGTTTATTAT+AGG - Chr7:70738649-70738668 MsG0780039937.01.T01:intron 15.0%
!!! AAAAAACCTTGTTATATAAA+TGG + Chr7:70738005-70738024 None:intergenic 15.0%
!!! AATTGTAAATAATCTGTTTT+AGG - Chr7:70737458-70737477 MsG0780039937.01.T01:intron 15.0%
!!! AATTTTGAATTTATTTTGTC+CGG - Chr7:70738997-70739016 MsG0780039937.01.T01:CDS 15.0%
!!! ATGATTTTTATTTTACTAAC+TGG - Chr7:70740256-70740275 MsG0780039937.01.T01:intron 15.0%
!!! ATGGTTTAAAATGTAAATTT+AGG - Chr7:70740608-70740627 MsG0780039937.01.T01:intron 15.0%
!!! TTCCTGTTAATTTTATTTTA+TGG - Chr7:70740589-70740608 MsG0780039937.01.T01:intron 15.0%
!!! TTCTTCTGATTTAATTTATT+TGG - Chr7:70739353-70739372 MsG0780039937.01.T01:CDS 15.0%
!! AAACAAATCATATCATCATA+TGG + Chr7:70738481-70738500 None:intergenic 20.0%
!! AACTATCAAAAATCATACAA+TGG + Chr7:70740211-70740230 None:intergenic 20.0%
!! AAGATAAAATAACAATGACT+TGG - Chr7:70737566-70737585 MsG0780039937.01.T01:intron 20.0%
!! CAATAGTTATTTATGTTGTA+TGG - Chr7:70739627-70739646 MsG0780039937.01.T01:intron 20.0%
!! GTTAAAATCATTTACATGAA+AGG + Chr7:70741081-70741100 None:intergenic 20.0%
!! GTTATATATACAAAGTAACA+AGG + Chr7:70739779-70739798 None:intergenic 20.0%
!! TAGGTCATTTATAATAAATC+TGG - Chr7:70737100-70737119 MsG0780039937.01.T01:exon 20.0%
!! TGGATTCTGATATTATATTA+GGG - Chr7:70736933-70736952 MsG0780039937.01.T01:three_prime_UTR 20.0%
!! TTGTATATATAACAACTTCA+TGG - Chr7:70739786-70739805 MsG0780039937.01.T01:intron 20.0%
!!! AAAGCATCCAAAAAAAATTA+TGG + Chr7:70740116-70740135 None:intergenic 20.0%
!!! ACAGATAAAATAATTTTCAC+CGG + Chr7:70740184-70740203 None:intergenic 20.0%
!!! AGGTAAACCATAATTTTTTT+TGG - Chr7:70740106-70740125 MsG0780039937.01.T01:intron 20.0%
!!! CTATTGTATAACTATTGATT+AGG + Chr7:70739613-70739632 None:intergenic 20.0%
!!! GTTGTTAAATACAATTTTGA+TGG - Chr7:70737832-70737851 MsG0780039937.01.T01:intron 20.0%
!!! GTTTTGGAATGTAATTTTTT+TGG - Chr7:70740228-70740247 MsG0780039937.01.T01:intron 20.0%
!!! TGGTTTTTCTTTGATTTTAA+TGG - Chr7:70740530-70740549 MsG0780039937.01.T01:intron 20.0%
!!! TGTATGATTTTTGATAGTTT+TGG - Chr7:70740212-70740231 MsG0780039937.01.T01:intron 20.0%
!!! TTTTCATATTTATTTGCTTG+TGG - Chr7:70738698-70738717 MsG0780039937.01.T01:intron 20.0%
! AAAAAAAACACCAAACTTAG+AGG + Chr7:70739067-70739086 None:intergenic 25.0%
! AAACAAAAATTTCAACTGAC+TGG + Chr7:70737909-70737928 None:intergenic 25.0%
! AAACGAGTAAAAAAGAATCA+TGG + Chr7:70739996-70740015 None:intergenic 25.0%
! AATGAAGGTGAAAAGAATTT+GGG - Chr7:70738756-70738775 MsG0780039937.01.T01:CDS 25.0%
! GAAAAACCAAAACTGAAAAT+AGG + Chr7:70740519-70740538 None:intergenic 25.0%
! GGAAAAGAACTATTACTAAT+TGG - Chr7:70740564-70740583 MsG0780039937.01.T01:intron 25.0%
! GTGGATTCTGATATTATATT+AGG - Chr7:70736932-70736951 MsG0780039937.01.T01:three_prime_UTR 25.0%
! TAATTATTATCTGACATCTC+CGG - Chr7:70740162-70740181 MsG0780039937.01.T01:intron 25.0%
! TGTGGTTTATAATTTACTCA+GGG - Chr7:70738716-70738735 MsG0780039937.01.T01:intron 25.0%
! TGTTGTCCATTTATATAACA+AGG - Chr7:70737996-70738015 MsG0780039937.01.T01:intron 25.0%
! TTGTGGTTTATAATTTACTC+AGG - Chr7:70738715-70738734 MsG0780039937.01.T01:intron 25.0%
!! TATGAAGTCATAATTTTCTG+TGG - Chr7:70737752-70737771 MsG0780039937.01.T01:intron 25.0%
!!! ATCTTTTGATTTGTTGTTGT+TGG - Chr7:70737016-70737035 MsG0780039937.01.T01:three_prime_UTR 25.0%
!!! ATGTTTTATTTTGACAGTGA+GGG - Chr7:70738101-70738120 MsG0780039937.01.T01:CDS 25.0%
!!! ATTCTATTAAAAGTGTTGTG+GGG - Chr7:70740796-70740815 MsG0780039937.01.T01:CDS 25.0%
!!! ATTTTAATGGAACTAAAAGC+AGG - Chr7:70740543-70740562 MsG0780039937.01.T01:intron 25.0%
!!! CATTCTATTAAAAGTGTTGT+GGG - Chr7:70740795-70740814 MsG0780039937.01.T01:CDS 25.0%
!!! TCTATCTTTGATGTTTTTGT+AGG - Chr7:70737081-70737100 MsG0780039937.01.T01:three_prime_UTR 25.0%
!!! TGTTGTTTCTTACTTTTTGT+TGG - Chr7:70737806-70737825 MsG0780039937.01.T01:intron 25.0%
AAAACACCATTGTTCCATAT+AGG - Chr7:70739881-70739900 MsG0780039937.01.T01:intron 30.0%
AAAATGTCAAACGCGATAAA+AGG + Chr7:70740674-70740693 None:intergenic 30.0%
AAACACCATTGTTCCATATA+GGG - Chr7:70739882-70739901 MsG0780039937.01.T01:intron 30.0%
AAACGCGATAAAAGGATAAA+GGG + Chr7:70740666-70740685 None:intergenic 30.0%
AACTTTCAGACACTTGAAAA+AGG + Chr7:70739194-70739213 None:intergenic 30.0%
CAAATAATCGCATGATTGTT+TGG + Chr7:70738944-70738963 None:intergenic 30.0%
CCATATTCTGCTACATTATA+AGG + Chr7:70739857-70739876 None:intergenic 30.0%
CCTTATAATGTAGCAGAATA+TGG - Chr7:70739854-70739873 MsG0780039937.01.T01:intron 30.0%
CTACAGGTTTAGACAATAAT+TGG - Chr7:70737268-70737287 MsG0780039937.01.T01:CDS 30.0%
GAATGAAGGTGAAAAGAATT+TGG - Chr7:70738755-70738774 MsG0780039937.01.T01:CDS 30.0%
GATAAAAGGATAAAGGGAAA+TGG + Chr7:70740660-70740679 None:intergenic 30.0%
TACTGAAATCTTCGCTAAAT+TGG - Chr7:70739559-70739578 MsG0780039937.01.T01:intron 30.0%
TCAACAAAGAAATACCTTCT+TGG + Chr7:70739746-70739765 None:intergenic 30.0%
TCATAGTCAATAAGCATGTT+TGG + Chr7:70737737-70737756 None:intergenic 30.0%
TGAAAAAGGTGAAGAAATAC+CGG + Chr7:70739019-70739038 None:intergenic 30.0%
TGTGGGGAAAATAAGTTAAA+TGG - Chr7:70740812-70740831 MsG0780039937.01.T01:CDS 30.0%
! AAATCAGAAGAAAGTACGAT+TGG + Chr7:70739345-70739364 None:intergenic 30.0%
! ACTTAAGCATTGCATATCTT+TGG - Chr7:70739235-70739254 MsG0780039937.01.T01:CDS 30.0%
! ATCTGTCCTATTTTCAGTTT+TGG - Chr7:70740510-70740529 MsG0780039937.01.T01:intron 30.0%
! TGGTTGGTTATTTAAACAGT+AGG + Chr7:70738924-70738943 None:intergenic 30.0%
! TTATCGCGTTTGACATTTTT+CGG - Chr7:70740675-70740694 MsG0780039937.01.T01:intron 30.0%
!! GCATTCTATTAAAAGTGTTG+TGG - Chr7:70740794-70740813 MsG0780039937.01.T01:CDS 30.0%
!! GGGATTTATAAGTGTTTTAG+CGG - Chr7:70740870-70740889 MsG0780039937.01.T01:exon 30.0%
!! TGTTGTTTCAAAGAAGAAGA+TGG - Chr7:70736706-70736725 MsG0780039937.01.T01:three_prime_UTR 30.0%
!! TTAGTTACTGTTTTGTTCTG+TGG - Chr7:70736913-70736932 MsG0780039937.01.T01:three_prime_UTR 30.0%
!!! ATGCTGTACTGTTTTTTGAA+TGG - Chr7:70738027-70738046 MsG0780039937.01.T01:CDS 30.0%
!!! GATGTTTTATTTTGACAGTG+AGG - Chr7:70738100-70738119 MsG0780039937.01.T01:CDS 30.0%
!!! GGATTTATAAGTGTTTTAGC+GGG - Chr7:70740871-70740890 MsG0780039937.01.T01:exon 30.0%
!!! GTTGGTTTCTTACTTTTTGT+TGG - Chr7:70737781-70737800 MsG0780039937.01.T01:intron 30.0%
ACCAAGCAAATCAAATGGAT+TGG + Chr7:70736738-70736757 None:intergenic 35.0%
ACTGAAGAAGTCATGAATGA+AGG - Chr7:70738741-70738760 MsG0780039937.01.T01:CDS 35.0%
ATAGCACAAGCGTTTATCAT+AGG - Chr7:70737522-70737541 MsG0780039937.01.T01:intron 35.0%
ATATAGGGTGCAAGTACATA+GGG - Chr7:70739897-70739916 MsG0780039937.01.T01:intron 35.0%
ATTGTCTTTCTTGCACGATA+AGG + Chr7:70739540-70739559 None:intergenic 35.0%
ATTTCAACTGACTGGACTAT+TGG + Chr7:70737901-70737920 None:intergenic 35.0%
CAAACGCGATAAAAGGATAA+AGG + Chr7:70740667-70740686 None:intergenic 35.0%
GAAAGTCATCACAACATTCA+TGG + Chr7:70741045-70741064 None:intergenic 35.0%
GCAAAGAAGACACTTGAAAA+AGG + Chr7:70739033-70739052 None:intergenic 35.0%
GCACTTCTATCTTTGTTCTA+GGG - Chr7:70739673-70739692 MsG0780039937.01.T01:intron 35.0%
GGGGAAAATAAGTTAAATGG+TGG - Chr7:70740815-70740834 MsG0780039937.01.T01:CDS 35.0%
GTCAATAAGCATGTTTGGAT+TGG + Chr7:70737732-70737751 None:intergenic 35.0%
GTGTGATTGATAGAACACTA+TGG - Chr7:70737311-70737330 MsG0780039937.01.T01:intron 35.0%
GTTTATCCAAACATCCAAAC+AGG + Chr7:70737485-70737504 None:intergenic 35.0%
TAATCGCATGATTGTTTGGT+TGG + Chr7:70738940-70738959 None:intergenic 35.0%
TACCAATGAAGCTGAAGAAA+AGG - Chr7:70738833-70738852 MsG0780039937.01.T01:CDS 35.0%
TCATCACCAAGCAAATCAAA+TGG + Chr7:70736743-70736762 None:intergenic 35.0%
TCTAAAGACTGAAGAGAGAA+AGG - Chr7:70739484-70739503 MsG0780039937.01.T01:intron 35.0%
TGAAAAAGGTGAAGCAATAC+TGG + Chr7:70739180-70739199 None:intergenic 35.0%
TGCACTTCTATCTTTGTTCT+AGG - Chr7:70739672-70739691 MsG0780039937.01.T01:intron 35.0%
TGGTTATTAGGAAATGACTC+TGG - Chr7:70739415-70739434 MsG0780039937.01.T01:CDS 35.0%
TGTCAAATAGCGACTATAGT+GGG - Chr7:70739831-70739850 MsG0780039937.01.T01:intron 35.0%
TGTCATCATTTGAGTACTCA+CGG + Chr7:70738248-70738267 None:intergenic 35.0%
TTATTAGGAAATGACTCTGG+AGG - Chr7:70739418-70739437 MsG0780039937.01.T01:CDS 35.0%
TTGTCAAATAGCGACTATAG+TGG - Chr7:70739830-70739849 MsG0780039937.01.T01:intron 35.0%
TTTCTTCAGCTTCATTGGTA+GGG + Chr7:70738833-70738852 None:intergenic 35.0%
! GTTGTTGCTGATTGGTTATT+AGG - Chr7:70739403-70739422 MsG0780039937.01.T01:CDS 35.0%
! TAAAGCATTTGAAACCATGC+AGG - Chr7:70739514-70739533 MsG0780039937.01.T01:intron 35.0%
! TATCGCGTTTGACATTTTTC+GGG - Chr7:70740676-70740695 MsG0780039937.01.T01:intron 35.0%
! TTTTCTTCAGCTTCATTGGT+AGG + Chr7:70738834-70738853 None:intergenic 35.0%
!! AATCTGTTTTAGGTCCTGTT+TGG - Chr7:70737468-70737487 MsG0780039937.01.T01:intron 35.0%
!! AATTTTCTGTGGTTAGCTGT+TGG - Chr7:70737763-70737782 MsG0780039937.01.T01:intron 35.0%
!! ACCAATCCATTTGATTTGCT+TGG - Chr7:70736734-70736753 MsG0780039937.01.T01:three_prime_UTR 35.0%
!! ATTTTTCAGCTACCAAGTGT+CGG - Chr7:70740903-70740922 MsG0780039937.01.T01:five_prime_UTR 35.0%
!! CAAATCAAATGGATTGGTAG+TGG + Chr7:70736732-70736751 None:intergenic 35.0%
!! GTATTAGTTTGTTCTGTGCA+TGG - Chr7:70737963-70737982 MsG0780039937.01.T01:intron 35.0%
!! TAACCTCGTTGTTTCTTATG+AGG - Chr7:70739258-70739277 MsG0780039937.01.T01:CDS 35.0%
!!! CTGTTTTTGTTGTTGCTGAT+TGG - Chr7:70739395-70739414 MsG0780039937.01.T01:CDS 35.0%
!!! GCTTATTTTAGCTTGTCTAC+GGG + Chr7:70737710-70737729 None:intergenic 35.0%
!!! GGCTTATTTTAGCTTGTCTA+CGG + Chr7:70737711-70737730 None:intergenic 35.0%
!!! TTTGACATTTTTCGGGGAAA+TGG - Chr7:70740683-70740702 MsG0780039937.01.T01:intron 35.0%
AATCCCACTATAACTCAGGT+GGG - Chr7:70740337-70740356 MsG0780039937.01.T01:intron 40.0%
ACAGCAAAGACAATAACACG+CGG + Chr7:70736689-70736708 None:intergenic 40.0%
ACTGTTGCATTCTCCAAGTT+TGG - Chr7:70738892-70738911 MsG0780039937.01.T01:intron 40.0%
AGAAACGATTTCAAGCGTGA+AGG - Chr7:70738556-70738575 MsG0780039937.01.T01:intron 40.0%
AGGTAAATGTCCATCTCCAT+TGG - Chr7:70738868-70738887 MsG0780039937.01.T01:intron 40.0%
ATAAAGGGAAATGGCTGCAA+GGG + Chr7:70740651-70740670 None:intergenic 40.0%
ATGCATGTTGAGAAGAACAG+AGG - Chr7:70737412-70737431 MsG0780039937.01.T01:intron 40.0%
ATGTCAAATGTTGCGTCTAC+AGG - Chr7:70737252-70737271 MsG0780039937.01.T01:CDS 40.0%
CAGTAGGAAAACACCAAACT+TGG + Chr7:70738908-70738927 None:intergenic 40.0%
CATATAGGGTGCAAGTACAT+AGG - Chr7:70739896-70739915 MsG0780039937.01.T01:intron 40.0%
CATTGCTGTACGAATTTCCA+CGG + Chr7:70740419-70740438 None:intergenic 40.0%
CTAGTAACCATTGCCTTCTT+GGG - Chr7:70740082-70740101 MsG0780039937.01.T01:intron 40.0%
CTATGTACTTGCACCCTATA+TGG + Chr7:70739898-70739917 None:intergenic 40.0%
GTTGTTGCATCCTCTAAGTT+TGG - Chr7:70739054-70739073 MsG0780039937.01.T01:intron 40.0%
TATGGTTTACCTTCCCAAGA+AGG + Chr7:70740098-70740117 None:intergenic 40.0%
TCTAGTAACCATTGCCTTCT+TGG - Chr7:70740081-70740100 MsG0780039937.01.T01:intron 40.0%
TCTCTTTCTCTCTCTCATTG+CGG - Chr7:70736532-70736551 MsG0780039937.01.T01:three_prime_UTR 40.0%
TGAAGTGAGAGAGAAATGCA+CGG + Chr7:70736501-70736520 None:intergenic 40.0%
TGATAAGGATAAGCGCAAAG+AGG - Chr7:70739699-70739718 MsG0780039937.01.T01:intron 40.0%
TGCATGTTGAGAAGAACAGA+GGG - Chr7:70737413-70737432 MsG0780039937.01.T01:intron 40.0%
TGGACATTTACCTTGTCTTC+AGG + Chr7:70738861-70738880 None:intergenic 40.0%
TGTGGCGTTCAAATGTTCTT+CGG + Chr7:70738428-70738447 None:intergenic 40.0%
TGTTTCTTATGAGGTGCACT+TGG - Chr7:70739267-70739286 MsG0780039937.01.T01:CDS 40.0%
TTAGGTCCTGTTTGGATGTT+TGG - Chr7:70737476-70737495 MsG0780039937.01.T01:intron 40.0%
TTGAAATTCTCTGCTGTGGT+TGG - Chr7:70740838-70740857 MsG0780039937.01.T01:CDS 40.0%
TTGCACCCTATATGGAACAA+TGG + Chr7:70739890-70739909 None:intergenic 40.0%
! AAGCCTTATCCCATTAACTG+GGG + Chr7:70737359-70737378 None:intergenic 40.0%
! AGTGCTGGAAGAGAAAAGAA+AGG - Chr7:70739451-70739470 MsG0780039937.01.T01:CDS 40.0%
! ATCGCGTTTGACATTTTTCG+GGG - Chr7:70740677-70740696 MsG0780039937.01.T01:intron 40.0%
! CAAGCCTTATCCCATTAACT+GGG + Chr7:70737360-70737379 None:intergenic 40.0%
! CTCCTTTTCTTCAGCTTCAT+TGG + Chr7:70738838-70738857 None:intergenic 40.0%
! TGCTGTGGTTGGTATAATGT+GGG - Chr7:70740849-70740868 MsG0780039937.01.T01:CDS 40.0%
!! TTTGTTCTAGGGAGCTGATA+AGG - Chr7:70739684-70739703 MsG0780039937.01.T01:intron 40.0%
!!! ATTTTTCGGGGAAATGGTTG+CGG - Chr7:70740689-70740708 MsG0780039937.01.T01:CDS 40.0%
AAAGCTGCTGTCAAGGAACA+GGG - Chr7:70736833-70736852 MsG0780039937.01.T01:three_prime_UTR 45.0%
ACCATAGCTACGTCTTTCTG+AGG + Chr7:70738331-70738350 None:intergenic 45.0%
ACGAAGGAGAAGATGGAGAT+CGG + Chr7:70736609-70736628 None:intergenic 45.0%
AGAAAAGGAGCCTGAAGACA+AGG - Chr7:70738848-70738867 MsG0780039937.01.T01:intron 45.0%
AGAACATTTGAACGCCACAG+TGG - Chr7:70738429-70738448 MsG0780039937.01.T01:intron 45.0%
AGGACAGATATGCGCGAAAA+GGG + Chr7:70740499-70740518 None:intergenic 45.0%
AGTTTAACACACGAGCGTGA+TGG + Chr7:70736662-70736681 None:intergenic 45.0%
ATGCAGCAACCCCAGTTAAT+GGG - Chr7:70737347-70737366 MsG0780039937.01.T01:intron 45.0%
CAACCCCAGTTAATGGGATA+AGG - Chr7:70737353-70737372 MsG0780039937.01.T01:intron 45.0%
CAAGGAAGAGAAAGCCAAGA+AGG - Chr7:70739729-70739748 MsG0780039937.01.T01:intron 45.0%
CCAGTTAATGGGATAAGGCT+TGG - Chr7:70737358-70737377 MsG0780039937.01.T01:intron 45.0%
CTGAAACTGATGTTGCCGAA+GGG - Chr7:70738796-70738815 MsG0780039937.01.T01:CDS 45.0%
GAATCCCACTATAACTCAGG+TGG - Chr7:70740336-70740355 MsG0780039937.01.T01:intron 45.0%
GATAAAGGGAAATGGCTGCA+AGG + Chr7:70740652-70740671 None:intergenic 45.0%
GCACCTCATAAGAAACAACG+AGG + Chr7:70739264-70739283 None:intergenic 45.0%
GCATAGTTACCATCGTACGA+AGG + Chr7:70736625-70736644 None:intergenic 45.0%
GGAGAATCCCACTATAACTC+AGG - Chr7:70740333-70740352 MsG0780039937.01.T01:intron 45.0%
GGAGAATGCAACAGTACCAA+TGG + Chr7:70738887-70738906 None:intergenic 45.0%
GTGGCGTTCAAATGTTCTTC+GGG + Chr7:70738427-70738446 None:intergenic 45.0%
GTGGTTGAAATTCTCTGCTG+TGG - Chr7:70740834-70740853 MsG0780039937.01.T01:CDS 45.0%
TAACCATTGCCTTCTTGGGA+AGG - Chr7:70740086-70740105 MsG0780039937.01.T01:intron 45.0%
TAGGACAGATATGCGCGAAA+AGG + Chr7:70740500-70740519 None:intergenic 45.0%
TCAGAAAGACGTAGCTATGG+TGG - Chr7:70738330-70738349 MsG0780039937.01.T01:intron 45.0%
TCCTCAGAAAGACGTAGCTA+TGG - Chr7:70738327-70738346 MsG0780039937.01.T01:intron 45.0%
TGCAACAGTACCAATGGAGA+TGG + Chr7:70738881-70738900 None:intergenic 45.0%
TGCTAAGAAAGCTGCTGTCA+AGG - Chr7:70736826-70736845 MsG0780039937.01.T01:three_prime_UTR 45.0%
TGGCGTTCAAATGTTCTTCG+GGG + Chr7:70738426-70738445 None:intergenic 45.0%
TTACCTTCCCAAGAAGGCAA+TGG + Chr7:70740092-70740111 None:intergenic 45.0%
! AATGGTGATGCTGGTGAAGA+GGG - Chr7:70738396-70738415 MsG0780039937.01.T01:intron 45.0%
! CCAAGCCTTATCCCATTAAC+TGG + Chr7:70737361-70737380 None:intergenic 45.0%
! CTCGTTTTGTGTGACGATCA+AGG - Chr7:70740009-70740028 MsG0780039937.01.T01:intron 45.0%
! CTGCTGTGGTTGGTATAATG+TGG - Chr7:70740848-70740867 MsG0780039937.01.T01:CDS 45.0%
! GCTGTGGTTGGTATAATGTG+GGG - Chr7:70740850-70740869 MsG0780039937.01.T01:CDS 45.0%
! GGAGGAATATGAGAAAGTGC+TGG - Chr7:70739436-70739455 MsG0780039937.01.T01:CDS 45.0%
! GGTTTCAACAATGGTGATGC+TGG - Chr7:70738387-70738406 MsG0780039937.01.T01:intron 45.0%
!! TACCAAGTGTCGGTAGAATC+AGG - Chr7:70740913-70740932 MsG0780039937.01.T01:five_prime_UTR 45.0%
!!! TTTTTCGGGGAAATGGTTGC+GGG - Chr7:70740690-70740709 MsG0780039937.01.T01:CDS 45.0%
AACCAGGGTCCTGTTGAAGA+AGG - Chr7:70738297-70738316 MsG0780039937.01.T01:intron 50.0%
ACAGCAGCTTTCTTAGCAGC+AGG + Chr7:70736824-70736843 None:intergenic 50.0%
AGATGGAGATCGGAGAGAGA+AGG + Chr7:70736599-70736618 None:intergenic 50.0%
AGCCTGATTCTACCGACACT+TGG + Chr7:70740918-70740937 None:intergenic 50.0%
AGGGAGTCCAGAAATGAAGG+AGG - Chr7:70738120-70738139 MsG0780039937.01.T01:CDS 50.0%
AGGGCTATCCTTGTTCCCTT+CGG + Chr7:70738814-70738833 None:intergenic 50.0%
AGTAACTAACCAGCCTGAGC+AGG + Chr7:70736902-70736921 None:intergenic 50.0%
CAGCAACGATGAGCTGAGAA+GGG + Chr7:70736775-70736794 None:intergenic 50.0%
CATGCAGCAACCCCAGTTAA+TGG - Chr7:70737346-70737365 MsG0780039937.01.T01:intron 50.0%
CCATCGTACGAAGGAGAAGA+TGG + Chr7:70736616-70736635 None:intergenic 50.0%
CCATCTTCTCCTTCGTACGA+TGG - Chr7:70736613-70736632 MsG0780039937.01.T01:three_prime_UTR 50.0%
CGAGCGTGATGGTTGAAACT+AGG + Chr7:70736651-70736670 None:intergenic 50.0%
CGTCGTGGAGGTTTCAACAA+TGG - Chr7:70738378-70738397 MsG0780039937.01.T01:intron 50.0%
CTCCATCCATTGAAGATCCC+GGG - Chr7:70740445-70740464 MsG0780039937.01.T01:intron 50.0%
GAAAGCTGCTGTCAAGGAAC+AGG - Chr7:70736832-70736851 MsG0780039937.01.T01:three_prime_UTR 50.0%
GAAATGCCCGGGATCTTCAA+TGG + Chr7:70740454-70740473 None:intergenic 50.0%
GACCTGTCTCCTTCTTCAAC+AGG + Chr7:70738309-70738328 None:intergenic 50.0%
GATGGAGATCGGAGAGAGAA+GGG + Chr7:70736598-70736617 None:intergenic 50.0%
GCAACATCAGTTTCAGCTGC+AGG + Chr7:70738792-70738811 None:intergenic 50.0%
GCGCAAAGAGGCTTATGACA+AGG - Chr7:70739711-70739730 MsG0780039937.01.T01:intron 50.0%
GCTCCATCCATTGAAGATCC+CGG - Chr7:70740444-70740463 MsG0780039937.01.T01:intron 50.0%
GCTGAAACTGATGTTGCCGA+AGG - Chr7:70738795-70738814 MsG0780039937.01.T01:CDS 50.0%
GGACACAGAGCACAGAGAAA+TGG + Chr7:70739324-70739343 None:intergenic 50.0%
GGATCTTCAATGGATGGAGC+AGG + Chr7:70740444-70740463 None:intergenic 50.0%
GGCTTAGAAGGCAACAAAGC+AGG + Chr7:70736872-70736891 None:intergenic 50.0%
GTCCTGTTGAAGAAGGAGAC+AGG - Chr7:70738304-70738323 MsG0780039937.01.T01:intron 50.0%
GTGAGGGAGTCCAGAAATGA+AGG - Chr7:70738117-70738136 MsG0780039937.01.T01:CDS 50.0%
TAGTGGGATTCTCCTTCAGC+TGG + Chr7:70740327-70740346 None:intergenic 50.0%
TCAGCAACGATGAGCTGAGA+AGG + Chr7:70736776-70736795 None:intergenic 50.0%
TCCAGAAATGAAGGAGGACG+CGG - Chr7:70738126-70738145 MsG0780039937.01.T01:CDS 50.0%
TCTCTCTCTCATTGCGGCTA+GGG - Chr7:70736538-70736557 MsG0780039937.01.T01:three_prime_UTR 50.0%
TGAGAAGAACAGAGGGCTAG+TGG - Chr7:70737420-70737439 MsG0780039937.01.T01:intron 50.0%
TGATGTTGCCGAAGGGAACA+AGG - Chr7:70738803-70738822 MsG0780039937.01.T01:CDS 50.0%
TTCACTTGGCACCCAAGGTA+GGG + Chr7:70740476-70740495 None:intergenic 50.0%
TTCTCTCTCTCATTGCGGCT+AGG - Chr7:70736537-70736556 MsG0780039937.01.T01:three_prime_UTR 50.0%
! CAATGGTGATGCTGGTGAAG+AGG - Chr7:70738395-70738414 MsG0780039937.01.T01:intron 50.0%
! GACAATTTGTTCCCTGCCTC+TGG - Chr7:70738264-70738283 MsG0780039937.01.T01:intron 50.0%
! GATTTCAAGCGTGAAGGTGC+TGG - Chr7:70738562-70738581 MsG0780039937.01.T01:intron 50.0%
! GGCAACAAAGCAGGCTTGTT+AGG + Chr7:70736863-70736882 None:intergenic 50.0%
!! AACAGGACCCTGGTTTTCAG+GGG + Chr7:70738292-70738311 None:intergenic 50.0%
!! CAACAGGACCCTGGTTTTCA+GGG + Chr7:70738293-70738312 None:intergenic 50.0%
!! GAGTTTCTGAAGCCAGCTGA+AGG - Chr7:70740312-70740331 MsG0780039937.01.T01:intron 50.0%
!! TCAACAGGACCCTGGTTTTC+AGG + Chr7:70738294-70738313 None:intergenic 50.0%
!! TTTGCTTGGTGATGACGCTG+AGG - Chr7:70736748-70736767 MsG0780039937.01.T01:three_prime_UTR 50.0%
!! TTTTCGGGGAAATGGTTGCG+GGG - Chr7:70740691-70740710 MsG0780039937.01.T01:CDS 50.0%
AACTAACCAGCCTGAGCAGG+AGG + Chr7:70736899-70736918 None:intergenic 55.0%
ACCCAAGGTAGGGAAATGCC+CGG + Chr7:70740466-70740485 None:intergenic 55.0%
ACCGCGTCCTCCTTCATTTC+TGG + Chr7:70738130-70738149 None:intergenic 55.0%
ACTAACCAGCCTGAGCAGGA+GGG + Chr7:70736898-70736917 None:intergenic 55.0%
AGAAATGAAGGAGGACGCGG+TGG - Chr7:70738129-70738148 MsG0780039937.01.T01:CDS 55.0%
CACTATAACTCAGGTGGGCG+CGG - Chr7:70740342-70740361 MsG0780039937.01.T01:intron 55.0%
CTCCTTCTTCAACAGGACCC+TGG + Chr7:70738302-70738321 None:intergenic 55.0%
CTTGCACGATAAGGCCTGCA+TGG + Chr7:70739531-70739550 None:intergenic 55.0%
GCAGCTTTCTTAGCAGCAGG+AGG + Chr7:70736821-70736840 None:intergenic 55.0%
GCGCCCACCTGAGTTATAGT+GGG + Chr7:70740343-70740362 None:intergenic 55.0%
GTTCACTTGGCACCCAAGGT+AGG + Chr7:70740477-70740496 None:intergenic 55.0%
TGCCCGGGATCTTCAATGGA+TGG + Chr7:70740450-70740469 None:intergenic 55.0%
TTGAACGCCACAGTGGCACT+GGG - Chr7:70738436-70738455 MsG0780039937.01.T01:intron 55.0%
TTTCGGGGAAATGGTTGCGG+GGG - Chr7:70740692-70740711 MsG0780039937.01.T01:CDS 55.0%
TTTGAACGCCACAGTGGCAC+TGG - Chr7:70738435-70738454 MsG0780039937.01.T01:intron 55.0%
! TCTGGAGCCCCTGAAAACCA+GGG - Chr7:70738282-70738301 MsG0780039937.01.T01:intron 55.0%
!! AAGCGTGAAGGTGCTGGAAG+GGG - Chr7:70738568-70738587 MsG0780039937.01.T01:intron 55.0%
!! AAGGTGCTGGAAGGGGTAAC+TGG - Chr7:70738575-70738594 MsG0780039937.01.T01:intron 55.0%
!! AGGTGCTGGAAGGGGTAACT+GGG - Chr7:70738576-70738595 MsG0780039937.01.T01:intron 55.0%
!! CAAGCGTGAAGGTGCTGGAA+GGG - Chr7:70738567-70738586 MsG0780039937.01.T01:intron 55.0%
!! TCAAGCGTGAAGGTGCTGGA+AGG - Chr7:70738566-70738585 MsG0780039937.01.T01:intron 55.0%
CACGACCACCACCAAATCCG+CGG + Chr7:70738209-70738228 None:intergenic 60.0%
CCCAAGGTAGGGAAATGCCC+GGG + Chr7:70740465-70740484 None:intergenic 60.0%
CCCGGGCATTTCCCTACCTT+GGG - Chr7:70740462-70740481 MsG0780039937.01.T01:intron 60.0%
CGCGCCCACCTGAGTTATAG+TGG + Chr7:70740344-70740363 None:intergenic 60.0%
CTAACCAGCCTGAGCAGGAG+GGG + Chr7:70736897-70736916 None:intergenic 60.0%
CTCCACGTCCACCAAACCCA+CGG + Chr7:70738182-70738201 None:intergenic 60.0%
CTCCTCCTCCTCGTGTACCA+CGG + Chr7:70740383-70740402 None:intergenic 60.0%
GGTCGTGGAGGTCGTGGTTT+CGG - Chr7:70738222-70738241 MsG0780039937.01.T01:intron 60.0%
TAAGCCAACCCCTCCTGCTC+AGG - Chr7:70736886-70736905 MsG0780039937.01.T01:three_prime_UTR 60.0%
TCCCGGGCATTTCCCTACCT+TGG - Chr7:70740461-70740480 MsG0780039937.01.T01:intron 60.0%
TTTCAGGGGCTCCAGAGGCA+GGG + Chr7:70738278-70738297 None:intergenic 60.0%
! GGTGCTGGAAGGGGTAACTG+GGG - Chr7:70738577-70738596 MsG0780039937.01.T01:intron 60.0%
!! CGTAGCTATGGTGGACCACG+AGG - Chr7:70738339-70738358 MsG0780039937.01.T01:intron 60.0%
!! CGTGGATTTGGTGGACGAGG+AGG - Chr7:70738153-70738172 MsG0780039937.01.T01:CDS 60.0%
!! CTCTGGAGCCCCTGAAAACC+AGG - Chr7:70738281-70738300 MsG0780039937.01.T01:intron 60.0%
!! CTGGTTTTCAGGGGCTCCAG+AGG + Chr7:70738283-70738302 None:intergenic 60.0%
!! GCAGGAGGGGTTGGCTTAGA+AGG + Chr7:70736884-70736903 None:intergenic 60.0%
!! GGATTTGGTGGTGGTCGTGG+AGG - Chr7:70738210-70738229 MsG0780039937.01.T01:intron 60.0%
!! GGTCGTGGATTTGGTGGACG+AGG - Chr7:70738150-70738169 MsG0780039937.01.T01:CDS 60.0%
!! TTTTCAGGGGCTCCAGAGGC+AGG + Chr7:70738279-70738298 None:intergenic 60.0%
AACCTCCACGACGACCTCCG+CGG + Chr7:70738371-70738390 None:intergenic 65.0%
ACACGAGGAGGAGGAGGAGG+AGG - Chr7:70740387-70740406 MsG0780039937.01.T01:intron 65.0%
ATAACTCAGGTGGGCGCGGC+AGG - Chr7:70740346-70740365 MsG0780039937.01.T01:intron 65.0%
CGAGGAGGTGACCGTGGGTT+TGG - Chr7:70738168-70738187 MsG0780039937.01.T01:intron 65.0%
CGCGGTGGTCGTGGATTTGG+TGG - Chr7:70738144-70738163 MsG0780039937.01.T01:CDS 65.0%
CGTGGAGGTGACCGCGGATT+TGG - Chr7:70738195-70738214 MsG0780039937.01.T01:intron 65.0%
CGTGGTACACGAGGAGGAGG+AGG - Chr7:70740381-70740400 MsG0780039937.01.T01:intron 65.0%
GGACGCGGTGGTCGTGGATT+TGG - Chr7:70738141-70738160 MsG0780039937.01.T01:CDS 65.0%
GGAGGAGGAGGAGGTTTCCG+TGG - Chr7:70740399-70740418 MsG0780039937.01.T01:intron 65.0%
GGAGGTGACCGCGGATTTGG+TGG - Chr7:70738198-70738217 MsG0780039937.01.T01:intron 65.0%
GGAGGTGACCGTGGGTTTGG+TGG - Chr7:70738171-70738190 MsG0780039937.01.T01:intron 65.0%
GGTACACGAGGAGGAGGAGG+AGG - Chr7:70740384-70740403 MsG0780039937.01.T01:intron 65.0%
GTGGACGAGGAGGTGACCGT+GGG - Chr7:70738163-70738182 MsG0780039937.01.T01:intron 65.0%
TAACTCAGGTGGGCGCGGCA+GGG - Chr7:70740347-70740366 MsG0780039937.01.T01:intron 65.0%
!! CGCGGATTTGGTGGTGGTCG+TGG - Chr7:70738207-70738226 MsG0780039937.01.T01:intron 65.0%
!! CGTGGGTTTGGTGGACGTGG+AGG - Chr7:70738180-70738199 MsG0780039937.01.T01:intron 65.0%
!! GACCGTGGGTTTGGTGGACG+TGG - Chr7:70738177-70738196 MsG0780039937.01.T01:intron 65.0%
!! GGTGACCGCGGATTTGGTGG+TGG - Chr7:70738201-70738220 MsG0780039937.01.T01:intron 65.0%
AACTCAGGTGGGCGCGGCAG+GGG - Chr7:70740348-70740367 MsG0780039937.01.T01:intron 70.0%
CCAACCCCTCCTGCTCAGGC+TGG - Chr7:70736890-70736909 MsG0780039937.01.T01:three_prime_UTR 70.0%
CCACGACGACCTCCGCGGTA+GGG + Chr7:70738366-70738385 None:intergenic 70.0%
CCAGCCTGAGCAGGAGGGGT+TGG + Chr7:70736893-70736912 None:intergenic 70.0%
CGAGGAGGAGGAGGAGGAGG+AGG - Chr7:70740390-70740409 MsG0780039937.01.T01:intron 70.0%
CGTGGTGGCCGTGGTACACG+AGG - Chr7:70740372-70740391 MsG0780039937.01.T01:intron 70.0%
GAAGGAGGACGCGGTGGTCG+TGG - Chr7:70738135-70738154 MsG0780039937.01.T01:CDS 70.0%
GGACCACGAGGTCCCTACCG+CGG - Chr7:70738351-70738370 MsG0780039937.01.T01:intron 70.0%
GGCCGTGGTACACGAGGAGG+AGG - Chr7:70740378-70740397 MsG0780039937.01.T01:intron 70.0%
GGTGGACGAGGAGGTGACCG+TGG - Chr7:70738162-70738181 MsG0780039937.01.T01:intron 70.0%
GGTGGACGTGGAGGTGACCG+CGG - Chr7:70738189-70738208 MsG0780039937.01.T01:intron 70.0%
GGTGGCCGTGGTACACGAGG+AGG - Chr7:70740375-70740394 MsG0780039937.01.T01:intron 70.0%
TACCGCGGAGGTCGTCGTGG+AGG - Chr7:70738366-70738385 MsG0780039937.01.T01:intron 70.0%
TCCACGACGACCTCCGCGGT+AGG + Chr7:70738367-70738386 None:intergenic 70.0%
! ACCCTCGCCCAGTGCCACTG+TGG + Chr7:70738446-70738465 None:intergenic 70.0%
! GCCACAGTGGCACTGGGCGA+GGG - Chr7:70738442-70738461 MsG0780039937.01.T01:intron 70.0%
! GGTGGTGGTCGTGGAGGTCG+TGG - Chr7:70738216-70738235 MsG0780039937.01.T01:intron 70.0%
CCACGAGGTCCCTACCGCGG+AGG - Chr7:70738354-70738373 MsG0780039937.01.T01:intron 75.0%
CCCTACCGCGGAGGTCGTCG+TGG - Chr7:70738363-70738382 MsG0780039937.01.T01:intron 75.0%
CCTCCGCGGTAGGGACCTCG+TGG + Chr7:70738357-70738376 None:intergenic 75.0%
! CGCCACAGTGGCACTGGGCG+AGG - Chr7:70738441-70738460 MsG0780039937.01.T01:intron 75.0%
! GGCAGGGGACGTGGTGGCCG+TGG - Chr7:70740363-70740382 MsG0780039937.01.T01:intron 80.0%
! GGGCGCGGCAGGGGACGTGG+TGG - Chr7:70740357-70740376 MsG0780039937.01.T01:intron 85.0%
! GGTGGGCGCGGCAGGGGACG+TGG - Chr7:70740354-70740373 MsG0780039937.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 70736497 70741100 70736497 ID=MsG0780039937.01;Name=MsG0780039937.01
Chr7 mRNA 70736497 70741100 70736497 ID=MsG0780039937.01.T01;Parent=MsG0780039937.01;Name=MsG0780039937.01.T01;_AED=0.31;_eAED=0.31;_QI=228|1|1|1|1|1|7|606|380
Chr7 exon 70736497 70737300 70736497 ID=MsG0780039937.01.T01:exon:13492;Parent=MsG0780039937.01.T01
Chr7 exon 70737847 70737903 70737847 ID=MsG0780039937.01.T01:exon:13491;Parent=MsG0780039937.01.T01
Chr7 exon 70738017 70738172 70738017 ID=MsG0780039937.01.T01:exon:13490;Parent=MsG0780039937.01.T01
Chr7 exon 70738728 70738860 70738728 ID=MsG0780039937.01.T01:exon:13489;Parent=MsG0780039937.01.T01
Chr7 exon 70738974 70739039 70738974 ID=MsG0780039937.01.T01:exon:13488;Parent=MsG0780039937.01.T01
Chr7 exon 70739134 70739479 70739134 ID=MsG0780039937.01.T01:exon:13487;Parent=MsG0780039937.01.T01
Chr7 exon 70740686 70741100 70740686 ID=MsG0780039937.01.T01:exon:13486;Parent=MsG0780039937.01.T01
Chr7 five_prime_UTR 70740873 70741100 70740873 ID=MsG0780039937.01.T01:five_prime_utr;Parent=MsG0780039937.01.T01
Chr7 CDS 70740686 70740872 70740686 ID=MsG0780039937.01.T01:cds;Parent=MsG0780039937.01.T01
Chr7 CDS 70739134 70739479 70739134 ID=MsG0780039937.01.T01:cds;Parent=MsG0780039937.01.T01
Chr7 CDS 70738974 70739039 70738974 ID=MsG0780039937.01.T01:cds;Parent=MsG0780039937.01.T01
Chr7 CDS 70738728 70738860 70738728 ID=MsG0780039937.01.T01:cds;Parent=MsG0780039937.01.T01
Chr7 CDS 70738017 70738172 70738017 ID=MsG0780039937.01.T01:cds;Parent=MsG0780039937.01.T01
Chr7 CDS 70737847 70737903 70737847 ID=MsG0780039937.01.T01:cds;Parent=MsG0780039937.01.T01
Chr7 CDS 70737103 70737300 70737103 ID=MsG0780039937.01.T01:cds;Parent=MsG0780039937.01.T01
Chr7 three_prime_UTR 70736497 70737102 70736497 ID=MsG0780039937.01.T01:three_prime_utr;Parent=MsG0780039937.01.T01
Gene Sequence

>MsG0780039937.01.T01

ATGGCCACTACCAATCCATTTGATTTGCTTGGTGATGACGCTGAGGACCCTTCTCAGCTCATCGTTGCTGAACAGCTCAAAGCTGCTGCTGCTCCTCCTGCTGCTAAGAAAGCTGCTGTCAAGGAACAGGGCAAGCCTAACAAGCCTGCTTTGTTGCCTTCTAAGCCAACCCCTCCTGCTCAGGCTGTGAGGGAGTCCAGAAATGAAGGAGGACGCGGTGGTCGTGGATTTGGTGGACGAGGAGGTGACCGTGGGTTTGGTGGACGTGGAGGTGACCGCGGATTTGGTGGTGGTCGTGGAGGTCGTGGTTTCGGCCGTGAGTACTCAAATGATGACAATTTGTTCCCTGCCTCTGGAGCCCCTGAAAACCAGGGTCCTGTTGAAGAAGGAGACAGGTCCTCAGAAAGACGTAGCTATGGTGGACCACGAGGTCCCTACCGCGGAGGTCGTCGTGGAGGTTTCAACAATGGTGATGCTGGTGAAGAGGGAAGACCCCGAAGAACATTTGAACGCCACAGTGGCACTGGGCGAGGAAACGATTTCAAGCGTGAAGGTGCTGGAAGGGGTAACTGGGGAACAGAAACTGATGAAATTGCTCAGGTGACTGAAGAAGTCATGAATGAAGGTGAAAAGAATTTGGGTGATGAGAAGCCTGCAGCTGAAACTGATGTTGCCGAAGGGAACAAGGATAGCCCTACCAATGAAGCTGAAGAAAAGGAGCCTGAAGACAAGGAAATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGAAAGGCTTTGCAAGCTCTAAAGACTGAAGAGAGAAAGGTTGACACTAAAGCATTTGAAACCATGCAGGCCTTATCGTGCAAGAAAGACAATACTGAAATCTTCGCTAAATTGGGAGCTGATAAGGATAAGCGCAAAGAGGCTTATGACAAGGAAGAGAAAGCCAAGAAGTCTGTCAGTATCAATGAGTTTCTGAAGCCAGCTGAAGGAGAATCCCACTATAACTCAGGTGGGCGCGGCAGGGGACGTGGTGGCCGTGGTACACGAGGAGGAGGAGGAGGAGGAGGTTTCCGTGGAAATTCGTACAGCAATGTACCTGCTCCATCCATTGAAGATCCCGGGCATTTCCCTACCTTGGGTGCCAAGTGA
Protein sequence

>MsG0780039937.01.T01

MATTNPFDLLGDDAEDPSQLIVAEQLKAAAAPPAAKKAAVKEQGKPNKPALLPSKPTPPAQAVRESRNEGGRGGRGFGGRGGDRGFGGRGGDRGFGGGRGGRGFGREYSNDDNLFPASGAPENQGPVEEGDRSSERRSYGGPRGPYRGGRRGGFNNGDAGEEGRPRRTFERHSGTGRGNDFKREGAGRGNWGTETDEIAQVTEEVMNEGEKNLGDEKPAAETDVAEGNKDSPTNEAEEKEPEDKEMTLEEYEKVLEEKRKALQALKTEERKVDTKAFETMQALSCKKDNTEIFAKLGADKDKRKEAYDKEEKAKKSVSINEFLKPAEGESHYNSGGRGRGRGGRGTRGGGGGGGFRGNSYSNVPAPSIEDPGHFPTLGAK*