AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042017.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042017.01.T01 MTR_8g009520 75.728 206 35 1 1 191 1 206 2.59e-102 294
MsG0880042017.01.T01 MTR_4g035850 51.445 173 69 2 29 186 39 211 2.32e-52 167
MsG0880042017.01.T01 MTR_4g035850 51.445 173 69 2 29 186 62 234 5.61e-52 167
MsG0880042017.01.T01 MTR_5g068940 50.867 173 70 2 29 186 39 211 1.64e-51 166
MsG0880042017.01.T01 MTR_4g035170 35.455 110 67 2 29 136 95 202 1.47e-19 84.7
MsG0880042017.01.T01 MTR_2g461290 26.633 199 103 5 29 186 80 276 8.60e-19 84.3
MsG0880042017.01.T01 MTR_4g103800 24.390 205 107 3 30 186 38 242 1.02e-16 76.3
MsG0880042017.01.T01 MTR_1g067050 33.333 93 59 1 30 119 62 154 7.65e-12 63.2
MsG0880042017.01.T01 MTR_4g103800 33.333 81 53 1 30 109 38 118 9.70e-12 61.6
MsG0880042017.01.T01 MTR_7g100530 31.183 93 61 1 30 119 45 137 8.73e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042017.01.T01 AT5G26667 72.376 181 35 2 29 194 22 202 1.00e-89 262
MsG0880042017.01.T01 AT5G26667 72.626 179 34 2 29 192 22 200 3.21e-89 261
MsG0880042017.01.T01 AT5G26667 72.626 179 34 2 29 192 22 200 3.21e-89 261
MsG0880042017.01.T01 AT5G26667 72.626 179 34 2 29 192 22 200 3.21e-89 261
MsG0880042017.01.T01 AT3G60180 56.863 204 67 4 1 186 1 201 1.76e-73 221
MsG0880042017.01.T01 AT3G60180 56.863 204 67 4 1 186 1 201 1.76e-73 221
MsG0880042017.01.T01 AT4G25280 52.023 173 68 2 29 186 61 233 2.67e-53 171
MsG0880042017.01.T01 AT4G25280 52.023 173 68 2 29 186 61 233 2.67e-53 171
MsG0880042017.01.T01 AT3G60961 53.383 133 43 3 73 186 1 133 9.27e-40 133
MsG0880042017.01.T01 AT5G35170 29.146 199 98 5 29 186 87 283 2.15e-20 89.0
MsG0880042017.01.T01 AT5G35170 29.146 199 98 5 29 186 87 283 2.25e-20 89.0
MsG0880042017.01.T01 AT5G47840 41.758 91 51 1 29 117 72 162 4.31e-20 85.9
MsG0880042017.01.T01 AT5G47840 41.758 91 51 1 29 117 72 162 4.96e-20 85.5
MsG0880042017.01.T01 AT5G63400 24.878 205 106 3 30 186 42 246 3.70e-16 74.7
MsG0880042017.01.T01 AT5G50370 25.641 195 97 4 30 176 43 237 2.73e-14 69.7
MsG0880042017.01.T01 AT5G63400 32.979 94 62 1 30 122 42 135 2.94e-12 63.2
MsG0880042017.01.T01 AT5G50370 35.802 81 51 1 30 109 43 123 1.20e-11 62.0
MsG0880042017.01.T01 AT2G39270 37.349 83 49 1 30 109 73 155 2.21e-11 62.0

Find 69 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGAATTAGTTTGATTTAA+TGG 0.108278 8:+2586912 None:intergenic
CTCTATAGAATTATAGAATT+TGG 0.112163 8:-2591218 MsG0880042017.01.T01:intron
ATCAAATCTGGCTCCGAAAA+TGG 0.173136 8:-2589919 MsG0880042017.01.T01:CDS
TTCCTTCTTTAATCATATTC+TGG 0.194476 8:+2589591 None:intergenic
GCAAATGTTGTCGAACATTT+TGG 0.209865 8:-2589982 MsG0880042017.01.T01:CDS
AATGACAAATTTCTTATTGA+TGG 0.306611 8:-2589509 MsG0880042017.01.T01:CDS
TTCGACAACATTTGCACATT+GGG 0.333869 8:+2589990 None:intergenic
CCCCGTGAGCATAGCTCATT+TGG 0.339462 8:-2591193 MsG0880042017.01.T01:CDS
TCTATAGAATTATAGAATTT+GGG 0.352839 8:-2591217 MsG0880042017.01.T01:intron
ATCGTTGAAGGTATTTATAT+TGG 0.359065 8:+2592794 None:intergenic
ACGACAACATTGAAACAATA+AGG 0.372468 8:-2589154 MsG0880042017.01.T01:CDS
GAGAAATTGTTGTTATGGTT+AGG 0.392336 8:+2592771 None:intergenic
AATATAATGGACAGGTGGCC+CGG 0.394986 8:-2590028 MsG0880042017.01.T01:intron
TGGGTACCCTTTCCACTGCC+CGG 0.404970 8:+2590009 None:intergenic
CTGCGAGCGGAAATCAAATC+TGG 0.406089 8:-2589931 MsG0880042017.01.T01:CDS
AATCTGAGAAATTGTTGTTA+TGG 0.408867 8:+2592766 None:intergenic
TGATTGCCCAGAGGAAGAAA+TGG 0.417731 8:-2589305 MsG0880042017.01.T01:intron
GACTCAAATACCTCCTCAAC+AGG 0.418858 8:+2588957 None:intergenic
TTCCTTCCGAGGTAACAATT+AGG 0.429145 8:-2589562 MsG0880042017.01.T01:CDS
GAGTGTTGTAAGTGCCTTTG+TGG 0.431495 8:-2586966 MsG0880042017.01.T01:three_prime_UTR
TCTCTCCTCTTTCGCGCAAA+AGG 0.438303 8:-2592733 MsG0880042017.01.T01:intron
TGGACAGGTGGCCCGGGCAG+TGG 0.438540 8:-2590021 MsG0880042017.01.T01:intron
AACAATAAGGAAGCGATTCA+AGG 0.444129 8:-2589141 MsG0880042017.01.T01:CDS
TCAAATCTGGCTCCGAAAAT+GGG 0.446253 8:-2589918 MsG0880042017.01.T01:intron
ACTCCAGAATTTGAAAATGT+TGG 0.446697 8:+2586985 None:intergenic
GGTGGCCCGGGCAGTGGAAA+GGG 0.446896 8:-2590015 MsG0880042017.01.T01:CDS
GGGTTTACTCACCTCAGTGC+TGG 0.448432 8:-2589961 MsG0880042017.01.T01:CDS
AATATAGAGGCAACAACCTC+AGG 0.451359 8:+2587082 None:intergenic
AGGTGGCCCGGGCAGTGGAA+AGG 0.463076 8:-2590016 MsG0880042017.01.T01:CDS
AAGTGCCTTTGTGGGTTTGT+GGG 0.464726 8:-2586957 MsG0880042017.01.T01:three_prime_UTR
TGGAGAGACGACTTCTTAGT+AGG 0.467613 8:-2589285 MsG0880042017.01.T01:CDS
AGTGTAGTTGCTATTACTCA+TGG 0.469040 8:-2591382 MsG0880042017.01.T01:exon
AGTGTTGTAAGTGCCTTTGT+GGG 0.495710 8:-2586965 MsG0880042017.01.T01:three_prime_UTR
GGGTACCCTTTCCACTGCCC+GGG 0.496546 8:+2590010 None:intergenic
TAAGTGCCTTTGTGGGTTTG+TGG 0.502127 8:-2586958 MsG0880042017.01.T01:three_prime_UTR
GCATCATAATAGTTAATCAC+AGG 0.502638 8:+2589098 None:intergenic
ATCCAGAATATGATTAAAGA+AGG 0.504467 8:-2589593 MsG0880042017.01.T01:CDS
GCCAAATGAGCTATGCTCAC+GGG 0.506865 8:+2591192 None:intergenic
ATTAACTATTATGATGCAAA+GGG 0.508845 8:-2589092 MsG0880042017.01.T01:CDS
GTTATGGTTAGGATCGTTGA+AGG 0.512352 8:+2592782 None:intergenic
AGGTGCAACAATAAATATAG+AGG 0.515399 8:+2587069 None:intergenic
GTGAGCATAGCTCATTTGGC+AGG 0.524437 8:-2591189 MsG0880042017.01.T01:CDS
TTTGTTGAGTTATTTAAGCA+CGG 0.528052 8:-2587017 MsG0880042017.01.T01:three_prime_UTR
AGCCTAATTGTTACCTCGGA+AGG 0.535061 8:+2589560 None:intergenic
GTTCGACAACATTTGCACAT+TGG 0.539900 8:+2589989 None:intergenic
ATTTGATTTCCGCTCGCAGA+AGG 0.550406 8:+2589935 None:intergenic
GATTAACTATTATGATGCAA+AGG 0.554771 8:-2589093 MsG0880042017.01.T01:CDS
ATATAATGGACAGGTGGCCC+GGG 0.555552 8:-2590027 MsG0880042017.01.T01:intron
CAGAAGCCTAATTGTTACCT+CGG 0.555573 8:+2589556 None:intergenic
TTGTTGAGTTATTTAAGCAC+GGG 0.559430 8:-2587016 MsG0880042017.01.T01:three_prime_UTR
TGCCAAATGAGCTATGCTCA+CGG 0.565376 8:+2591191 None:intergenic
TGTTATTGAAGCTGCAAACA+AGG 0.570574 8:-2591355 MsG0880042017.01.T01:intron
CCGTGCAGCATTTGAGAGAG+TGG 0.571248 8:-2589465 MsG0880042017.01.T01:intron
TGCTGGTGACCTTCTGCGAG+CGG 0.575371 8:-2589944 MsG0880042017.01.T01:CDS
CCAAATGAGCTATGCTCACG+GGG 0.600724 8:+2591193 None:intergenic
GTGTAGTTGCTATTACTCAT+GGG 0.602866 8:-2591381 MsG0880042017.01.T01:exon
TGTTGAGGAGGTATTTGAGT+CGG 0.603618 8:-2588955 MsG0880042017.01.T01:CDS
CATCATAATAGTTAATCACA+GGG 0.608290 8:+2589099 None:intergenic
TGCTGCAAGGCCTGTTGAGG+AGG 0.615003 8:-2588967 MsG0880042017.01.T01:CDS
CCACTCTCTCAAATGCTGCA+CGG 0.625742 8:+2589465 None:intergenic
TGATGCTGCAAGGCCTGTTG+AGG 0.626580 8:-2588970 MsG0880042017.01.T01:CDS
ATATCTAGCAACAAAATGTG+AGG 0.633702 8:+2587122 None:intergenic
TGAGCATAGCTCATTTGGCA+GGG 0.636772 8:-2591188 MsG0880042017.01.T01:CDS
TGCAAAGGGAAAAGTTCGCA+AGG 0.641623 8:-2589078 MsG0880042017.01.T01:intron
ACGACTTCTTAGTAGGAACC+AGG 0.649336 8:-2589278 MsG0880042017.01.T01:intron
AAATTCCCACAAACCCACAA+AGG 0.652518 8:+2586952 None:intergenic
TTTAAATGAATGATTCGACA+AGG 0.653920 8:+2587049 None:intergenic
CAACAAGCAATGCAAGACAG+TGG 0.683184 8:-2589533 MsG0880042017.01.T01:CDS
GCAGAAGGTCACCAGCACTG+AGG 0.757069 8:+2589950 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCATTTACATAAAATTA+GGG + Chr8:2588095-2588114 None:intergenic 10.0%
!! ATAAAATATGATAAAGTAAA+AGG + Chr8:2591066-2591085 None:intergenic 10.0%
!! ATTTAATGGTTAAAAATATT+GGG + Chr8:2592784-2592803 None:intergenic 10.0%
!! TAAAATATGATAAAGTAAAA+GGG + Chr8:2591065-2591084 None:intergenic 10.0%
!! TAATTCATTTACATAAAATT+AGG + Chr8:2588096-2588115 None:intergenic 10.0%
!! TTAAATTTAAATAAAGATAC+CGG - Chr8:2591224-2591243 MsG0880042017.01.T01:intron 10.0%
!! TTATATTGCTTATATTTAAT+AGG - Chr8:2589288-2589307 MsG0880042017.01.T01:CDS 10.0%
!! TTTACATAAATAATTTATCT+TGG - Chr8:2588255-2588274 MsG0880042017.01.T01:intron 10.0%
!!! TATAATTCTTTTTTTTTTTG+CGG + Chr8:2588630-2588649 None:intergenic 10.0%
!! AAGAATTAAATAATATGGTT+TGG - Chr8:2588720-2588739 MsG0880042017.01.T01:intron 15.0%
!! AATTATTTATGTAAAGAATC+AGG + Chr8:2588250-2588269 None:intergenic 15.0%
!! ATATGACAAAATAAAATGTA+TGG + Chr8:2591764-2591783 None:intergenic 15.0%
!! ATTAAAAACAATATTAACAG+TGG - Chr8:2591137-2591156 MsG0880042017.01.T01:intron 15.0%
!! ATTATACAATTATATCAAAC+TGG - Chr8:2592415-2592434 MsG0880042017.01.T01:intron 15.0%
!! ATTCATTTACATAAAATTAG+GGG + Chr8:2588094-2588113 None:intergenic 15.0%
!! GATTTAATGGTTAAAAATAT+TGG + Chr8:2592785-2592804 None:intergenic 15.0%
!! TATGACAAAATAAAATGTAT+GGG + Chr8:2591763-2591782 None:intergenic 15.0%
!! TCTATAGAATTATAGAATTT+GGG - Chr8:2588490-2588509 MsG0880042017.01.T01:intron 15.0%
!! TTAAAAACAATATTAACAGT+GGG - Chr8:2591138-2591157 MsG0880042017.01.T01:intron 15.0%
!! TTATGTAAATGAATTATGAT+TGG - Chr8:2588100-2588119 MsG0880042017.01.T01:intron 15.0%
!! TTATTGATCTCATAATATAA+TGG - Chr8:2589666-2589685 MsG0880042017.01.T01:intron 15.0%
!!! ACAAATTTTGAAAATGATAT+TGG - Chr8:2591429-2591448 MsG0880042017.01.T01:intron 15.0%
!!! CAAAAATGATAGTTTTTATT+CGG - Chr8:2589935-2589954 MsG0880042017.01.T01:CDS 15.0%
!!! CAAATTTTGAAAATGATATT+GGG - Chr8:2591430-2591449 MsG0880042017.01.T01:intron 15.0%
!!! TAAGAATTAGTTTGATTTAA+TGG + Chr8:2592798-2592817 None:intergenic 15.0%
!!! TATTCTTTCATTTTTTTTTC+AGG - Chr8:2592534-2592553 MsG0880042017.01.T01:intron 15.0%
!! AAAAAGACAGAATATGTATT+TGG + Chr8:2588055-2588074 None:intergenic 20.0%
!! AAAAGAAGGAAAAATGTATT+TGG + Chr8:2587963-2587982 None:intergenic 20.0%
!! AATGACAAATTTCTTATTGA+TGG - Chr8:2590198-2590217 MsG0880042017.01.T01:intron 20.0%
!! AATTATAATTTCAATGTGCT+TGG + Chr8:2591578-2591597 None:intergenic 20.0%
!! AATTTCTATGTATTTATGCT+AGG - Chr8:2589961-2589980 MsG0880042017.01.T01:CDS 20.0%
!! ACAAAAAAATATTACTGAGT+GGG - Chr8:2591844-2591863 MsG0880042017.01.T01:intron 20.0%
!! AGCTTATTTATGTTTATCTT+AGG + Chr8:2589485-2589504 None:intergenic 20.0%
!! ATATGTAGATTTGATATGAT+AGG - Chr8:2587918-2587937 MsG0880042017.01.T01:intron 20.0%
!! ATGACAAAATAAAATGTATG+GGG + Chr8:2591762-2591781 None:intergenic 20.0%
!! ATTAACTATTATGATGCAAA+GGG - Chr8:2590615-2590634 MsG0880042017.01.T01:intron 20.0%
!! ATTCAACTGATATAAGTATT+CGG - Chr8:2589256-2589275 MsG0880042017.01.T01:intron 20.0%
!! ATTTATTTGTAGGATACAAA+TGG - Chr8:2588986-2589005 MsG0880042017.01.T01:intron 20.0%
!! CTCTATAGAATTATAGAATT+TGG - Chr8:2588489-2588508 MsG0880042017.01.T01:intron 20.0%
!! TACTATTCAAAAGAAGAAAA+GGG + Chr8:2589874-2589893 None:intergenic 20.0%
!! TCAATTCTTCATTTATTTGT+AGG - Chr8:2588976-2588995 MsG0880042017.01.T01:intron 20.0%
!! TGAAATTGATAAGAAAAGAA+AGG - Chr8:2592150-2592169 MsG0880042017.01.T01:intron 20.0%
!! TGAATTCTATAATTGAACAA+AGG + Chr8:2588859-2588878 None:intergenic 20.0%
!! TTACTATTCAAAAGAAGAAA+AGG + Chr8:2589875-2589894 None:intergenic 20.0%
!! TTTATTTAAAAACTCATGCA+AGG + Chr8:2590971-2590990 None:intergenic 20.0%
!! TTTCTATCAAAGAGAAAATT+TGG - Chr8:2590858-2590877 MsG0880042017.01.T01:intron 20.0%
!!! AAAAATGTATTTTATACCTG+AGG - Chr8:2592609-2592628 MsG0880042017.01.T01:intron 20.0%
!!! AAAGTAAAGCATAGATTTTT+TGG - Chr8:2592012-2592031 MsG0880042017.01.T01:intron 20.0%
!!! AAGTAAAGCATAGATTTTTT+GGG - Chr8:2592013-2592032 MsG0880042017.01.T01:intron 20.0%
!!! AATCAGATTTTCAAAAGAAA+CGG + Chr8:2588438-2588457 None:intergenic 20.0%
!!! AATCCAATATAAAAGCTTTT+TGG + Chr8:2592380-2592399 None:intergenic 20.0%
!!! ACAACTGTAGTTTTTTATTT+AGG + Chr8:2589018-2589037 None:intergenic 20.0%
!!! ACTGCTTGTTATAAATAAAT+TGG + Chr8:2589159-2589178 None:intergenic 20.0%
!!! ATTTGTTTTACAATGCATTA+TGG - Chr8:2591084-2591103 MsG0880042017.01.T01:intron 20.0%
!!! ATTTTCTCTTTGATAGAAAA+TGG + Chr8:2590857-2590876 None:intergenic 20.0%
!!! CTTTAGATTAGATATTTTGT+TGG - Chr8:2592093-2592112 MsG0880042017.01.T01:intron 20.0%
!!! TACATTTTTCCTTCTTTTAT+TGG - Chr8:2587965-2587984 MsG0880042017.01.T01:intron 20.0%
!!! TGAAATTTTCAACATTGATT+AGG - Chr8:2587208-2587227 MsG0880042017.01.T01:intron 20.0%
!!! TGATTTTTTGACATTGATTA+GGG - Chr8:2587593-2587612 MsG0880042017.01.T01:intron 20.0%
!!! TTACTTTTAGAAGTAAAATC+TGG + Chr8:2591999-2592018 None:intergenic 20.0%
!!! TTCTTCTTTTGAATAGTAAA+TGG - Chr8:2589876-2589895 MsG0880042017.01.T01:intron 20.0%
! ACTAGTAAGATGATTATCAA+AGG + Chr8:2591821-2591840 None:intergenic 25.0%
! AGATGATATAAACTTCTATG+CGG + Chr8:2591954-2591973 None:intergenic 25.0%
! ATAAATACATTCGCTTTCAA+AGG + Chr8:2589604-2589623 None:intergenic 25.0%
! ATACAATTATATCAAACTGG+AGG - Chr8:2592418-2592437 MsG0880042017.01.T01:intron 25.0%
! ATACTGGATATCAATGATAA+AGG - Chr8:2590523-2590542 MsG0880042017.01.T01:intron 25.0%
! ATCCAATTTGTACATAAGTT+TGG - Chr8:2592207-2592226 MsG0880042017.01.T01:intron 25.0%
! ATCCAGAATATGATTAAAGA+AGG - Chr8:2590114-2590133 MsG0880042017.01.T01:intron 25.0%
! ATGTATTGCATAATAGTGTA+GGG + Chr8:2590462-2590481 None:intergenic 25.0%
! ATGTATTTATGCTAGGTTAT+GGG - Chr8:2589968-2589987 MsG0880042017.01.T01:CDS 25.0%
! CATAAATAGTCAAATGCATT+AGG + Chr8:2589109-2589128 None:intergenic 25.0%
! CATCATAATAGTTAATCACA+GGG + Chr8:2590611-2590630 None:intergenic 25.0%
! CCAAATATAAAACTAATTGC+CGG - Chr8:2591270-2591289 MsG0880042017.01.T01:intron 25.0%
! CTTATCTAGCATAAATAGAA+AGG + Chr8:2592044-2592063 None:intergenic 25.0%
! GACAAAAAAATATTACTGAG+TGG - Chr8:2591843-2591862 MsG0880042017.01.T01:intron 25.0%
! GAGAGATTAAGAAATTTAAC+TGG - Chr8:2587463-2587482 MsG0880042017.01.T01:intron 25.0%
! GATTAACTATTATGATGCAA+AGG - Chr8:2590614-2590633 MsG0880042017.01.T01:intron 25.0%
! GCATTATGTCTAAACTATTT+CGG - Chr8:2589310-2589329 MsG0880042017.01.T01:intron 25.0%
! TAAATACATTCGCTTTCAAA+GGG + Chr8:2589603-2589622 None:intergenic 25.0%
! TACTGGATATCAATGATAAA+GGG - Chr8:2590524-2590543 MsG0880042017.01.T01:intron 25.0%
! TATGTATTGCATAATAGTGT+AGG + Chr8:2590463-2590482 None:intergenic 25.0%
! TATGTATTTATGCTAGGTTA+TGG - Chr8:2589967-2589986 MsG0880042017.01.T01:CDS 25.0%
! TCAAAATATAGGACAAATGT+TGG + Chr8:2590385-2590404 None:intergenic 25.0%
! TGATCATTATAATATTTGCC+TGG - Chr8:2588280-2588299 MsG0880042017.01.T01:intron 25.0%
! TTAAATTTCTCATTCTTCAC+AGG + Chr8:2587414-2587433 None:intergenic 25.0%
! TTAATCACTTATTTGACTGT+AGG - Chr8:2588906-2588925 MsG0880042017.01.T01:intron 25.0%
! TTCCTTCTTTAATCATATTC+TGG + Chr8:2590119-2590138 None:intergenic 25.0%
! TTTAAATGAATGATTCGACA+AGG + Chr8:2592661-2592680 None:intergenic 25.0%
! TTTACTAACATCTCATTCAA+AGG + Chr8:2589084-2589103 None:intergenic 25.0%
! TTTATTATCTAGTGATGTGA+TGG - Chr8:2592319-2592338 MsG0880042017.01.T01:intron 25.0%
! TTTGTTGAGTTATTTAAGCA+CGG - Chr8:2592690-2592709 MsG0880042017.01.T01:intron 25.0%
!! AATCTGAGAAATTGTTGTTA+TGG + Chr8:2586944-2586963 None:intergenic 25.0%
!! CATATAATTGTACCCATTTT+CGG + Chr8:2589804-2589823 None:intergenic 25.0%
!! GTACCAAAAAGCTTTTATAT+TGG - Chr8:2592374-2592393 MsG0880042017.01.T01:intron 25.0%
!! TGGATTTTGAACATTGATAT+GGG - Chr8:2587483-2587502 MsG0880042017.01.T01:intron 25.0%
!! TTGATAATCATCTTACTAGT+GGG - Chr8:2591821-2591840 MsG0880042017.01.T01:intron 25.0%
!! TTGTGTTTATTGTTGTTGTT+TGG - Chr8:2589642-2589661 MsG0880042017.01.T01:intron 25.0%
!! TTTGATAATCATCTTACTAG+TGG - Chr8:2591820-2591839 MsG0880042017.01.T01:intron 25.0%
!!! AGTAAAGCATAGATTTTTTG+GGG - Chr8:2592014-2592033 MsG0880042017.01.T01:intron 25.0%
!!! ATCGTTGAAGGTATTTATAT+TGG + Chr8:2586916-2586935 None:intergenic 25.0%
!!! ATTAGATATTTTGTTGGTGA+TGG - Chr8:2592099-2592118 MsG0880042017.01.T01:intron 25.0%
!!! ATTCAGTATTGATTTCAACT+TGG - Chr8:2588880-2588899 MsG0880042017.01.T01:intron 25.0%
!!! CTGATTTTTTGACATTGATT+AGG - Chr8:2587592-2587611 MsG0880042017.01.T01:intron 25.0%
!!! CTTATTTTTCACGTTGATTA+GGG - Chr8:2587319-2587338 MsG0880042017.01.T01:intron 25.0%
!!! GTTTCTTTTGAAAATCTGAT+TGG - Chr8:2588437-2588456 MsG0880042017.01.T01:intron 25.0%
!!! TATTAAGCACTGAAAACATA+AGG + Chr8:2590506-2590525 None:intergenic 25.0%
!!! TGTCAATTTTAATGCAGTAT+TGG - Chr8:2588815-2588834 MsG0880042017.01.T01:intron 25.0%
AAACACAATAGACAGACAAA+TGG + Chr8:2589630-2589649 None:intergenic 30.0%
AAATTTCTTAATCTCTCACG+CGG + Chr8:2587460-2587479 None:intergenic 30.0%
AACTCAATTCATGTGTTTGA+CGG - Chr8:2587432-2587451 MsG0880042017.01.T01:intron 30.0%
AATTTCTCAATATTTGCACG+CGG + Chr8:2587569-2587588 None:intergenic 30.0%
ACGACAACATTGAAACAATA+AGG - Chr8:2590553-2590572 MsG0880042017.01.T01:intron 30.0%
ACTCCAGAATTTGAAAATGT+TGG + Chr8:2592725-2592744 None:intergenic 30.0%
ACTGTAAGAATTTACAGAAG+CGG + Chr8:2591470-2591489 None:intergenic 30.0%
AGGTGCAACAATAAATATAG+AGG + Chr8:2592641-2592660 None:intergenic 30.0%
AGTAAGATTAAAACAGCTTG+GGG - Chr8:2589402-2589421 MsG0880042017.01.T01:intron 30.0%
ATAAACTTCTATGCGGAATT+GGG + Chr8:2591947-2591966 None:intergenic 30.0%
ATATCTAGCAACAAAATGTG+AGG + Chr8:2592588-2592607 None:intergenic 30.0%
ATCTGCAAATAAAGAAATCC+AGG + Chr8:2588301-2588320 None:intergenic 30.0%
ATTGACACAATCTCACTAAT+CGG + Chr8:2588802-2588821 None:intergenic 30.0%
ATTTCAACTATGGATGCATT+TGG + Chr8:2589511-2589530 None:intergenic 30.0%
ATTTGACTGTAGGATACTAA+CGG - Chr8:2588916-2588935 MsG0880042017.01.T01:intron 30.0%
CAAATAAATGTTTACCCTCT+CGG - Chr8:2589227-2589246 MsG0880042017.01.T01:intron 30.0%
CAACAAAATACAGCAAAATG+CGG + Chr8:2591792-2591811 None:intergenic 30.0%
CAGGAATTGATGTTTATCTA+TGG - Chr8:2591673-2591692 MsG0880042017.01.T01:intron 30.0%
CATAACAGAGAAAAAAAGCA+TGG + Chr8:2587088-2587107 None:intergenic 30.0%
CATAGATAAACATCAATTCC+TGG + Chr8:2591675-2591694 None:intergenic 30.0%
CCAACTGGTATAATTGTATT+CGG - Chr8:2591366-2591385 MsG0880042017.01.T01:CDS 30.0%
CTAATTTCCTAAATGCATCA+TGG - Chr8:2590339-2590358 MsG0880042017.01.T01:intron 30.0%
CTATAAACAATCAGTGAAAC+AGG + Chr8:2589850-2589869 None:intergenic 30.0%
GACCAAACTTATGTACAAAT+TGG + Chr8:2592212-2592231 None:intergenic 30.0%
GAGTAAGATTAAAACAGCTT+GGG - Chr8:2589401-2589420 MsG0880042017.01.T01:intron 30.0%
GATGCATTTAGGAAATTAGA+AGG + Chr8:2590338-2590357 None:intergenic 30.0%
GCATCATAATAGTTAATCAC+AGG + Chr8:2590612-2590631 None:intergenic 30.0%
GCTATTGCAAACTTAACTTA+AGG - Chr8:2589539-2589558 MsG0880042017.01.T01:CDS 30.0%
GTTATTTACAAACCTAGTAG+TGG + Chr8:2592277-2592296 None:intergenic 30.0%
TAAGTTAAGTTTGCAATAGC+TGG + Chr8:2589539-2589558 None:intergenic 30.0%
TAGCGTAAAATGCTACTATA+TGG + Chr8:2588187-2588206 None:intergenic 30.0%
TATAAACTTCTATGCGGAAT+TGG + Chr8:2591948-2591967 None:intergenic 30.0%
TGAAGTTATGATTCCTGATA+TGG - Chr8:2587746-2587765 MsG0880042017.01.T01:intron 30.0%
TGTAGATTTGATATGATAGG+CGG - Chr8:2587921-2587940 MsG0880042017.01.T01:intron 30.0%
TGTTAAGTACGAGAGAATTA+TGG - Chr8:2591889-2591908 MsG0880042017.01.T01:intron 30.0%
TGTTTATCTATGGTATTTGC+AGG - Chr8:2591683-2591702 MsG0880042017.01.T01:intron 30.0%
TTGTTGAGTTATTTAAGCAC+GGG - Chr8:2592691-2592710 MsG0880042017.01.T01:intron 30.0%
TTTACGCTATCAATATGTGA+CGG - Chr8:2588198-2588217 MsG0880042017.01.T01:intron 30.0%
! ATGTTTTCAGTGCTTAATAC+TGG - Chr8:2590507-2590526 MsG0880042017.01.T01:intron 30.0%
! CAAATGTTGTCGAACATTTT+GGG - Chr8:2589726-2589745 MsG0880042017.01.T01:intron 30.0%
! CTGGATTTTGAACATTGATA+TGG - Chr8:2587482-2587501 MsG0880042017.01.T01:intron 30.0%
! CTTTTGCTACCAATAAAAGA+AGG + Chr8:2587977-2587996 None:intergenic 30.0%
! GAGAAATTGTTGTTATGGTT+AGG + Chr8:2586939-2586958 None:intergenic 30.0%
! GATCCAACATTTTCAAATTC+TGG - Chr8:2592719-2592738 MsG0880042017.01.T01:intron 30.0%
! GGACATTATGTTACTGTTTT+AGG - Chr8:2590713-2590732 MsG0880042017.01.T01:intron 30.0%
! GTTTTACAATGCATTATGGA+CGG - Chr8:2591088-2591107 MsG0880042017.01.T01:intron 30.0%
! TCCAATGAATTTGTTTATGC+CGG + Chr8:2591246-2591265 None:intergenic 30.0%
! TTATGACTTGTCTGACAAAT+TGG - Chr8:2591535-2591554 MsG0880042017.01.T01:intron 30.0%
! TTTTGTTGGACATTCTATCA+TGG + Chr8:2588687-2588706 None:intergenic 30.0%
!! GATCTCATAATATAATGGAC+AGG - Chr8:2589671-2589690 MsG0880042017.01.T01:intron 30.0%
!! GCTTATTTTTCACGTTGATT+AGG - Chr8:2587318-2587337 MsG0880042017.01.T01:intron 30.0%
!! TAGTAAATGGCTAGCTTTAT+AGG - Chr8:2589889-2589908 MsG0880042017.01.T01:intron 30.0%
!! TCATTGTGCTGTTTAAAATC+AGG + Chr8:2590095-2590114 None:intergenic 30.0%
!! TTTGCTGTATTTTGTTGTAG+AGG - Chr8:2591795-2591814 MsG0880042017.01.T01:intron 30.0%
!! TTTTCAACATTGATTAGGAG+TGG - Chr8:2587213-2587232 MsG0880042017.01.T01:intron 30.0%
!!! CCGGCAATTAGTTTTATATT+TGG + Chr8:2591273-2591292 None:intergenic 30.0%
!!! GTTTACTTTTTTCGCATCAA+TGG - Chr8:2591494-2591513 MsG0880042017.01.T01:intron 30.0%
!!! TTGTGTGTGTTTGTTTTGAA+AGG + Chr8:2589453-2589472 None:intergenic 30.0%
AACAATAAGGAAGCGATTCA+AGG - Chr8:2590566-2590585 MsG0880042017.01.T01:intron 35.0%
AATTGGAACCCTTAGAATAC+AGG - Chr8:2591552-2591571 MsG0880042017.01.T01:intron 35.0%
AATTTCTCATTCTTCACAGG+CGG + Chr8:2587411-2587430 None:intergenic 35.0%
AATTTGTACCTTCCTAGTGT+TGG + Chr8:2591416-2591435 None:intergenic 35.0%
ACCGGCATAAACAAATTCAT+TGG - Chr8:2591242-2591261 MsG0880042017.01.T01:intron 35.0%
ACTACAGTTGTGTTTGTGTT+AGG - Chr8:2589027-2589046 MsG0880042017.01.T01:intron 35.0%
AGATCTAACTGCAAACGAAA+CGG + Chr8:2587046-2587065 None:intergenic 35.0%
AGCTTATAGAACTAGCTATG+TGG + Chr8:2589363-2589382 None:intergenic 35.0%
AGTACGAGAGAATTATGGTT+AGG - Chr8:2591894-2591913 MsG0880042017.01.T01:intron 35.0%
ATAATGTCCTTTAGCACATG+AGG + Chr8:2590702-2590721 None:intergenic 35.0%
ATGTCTGCTTGATCTGTAAT+TGG - Chr8:2587832-2587851 MsG0880042017.01.T01:intron 35.0%
ATGTTGATACACACAAGTCT+AGG + Chr8:2591392-2591411 None:intergenic 35.0%
ATTCAAAGGTAAGCTGACTA+TGG + Chr8:2589070-2589089 None:intergenic 35.0%
ATTCACTCATTCAGCTTAAG+CGG - Chr8:2588577-2588596 MsG0880042017.01.T01:intron 35.0%
CCGAATACAATTATACCAGT+TGG + Chr8:2591369-2591388 None:intergenic 35.0%
GCAGTACAATTAACCATATC+AGG + Chr8:2587762-2587781 None:intergenic 35.0%
GCTGGTATACATTTCAACTA+TGG + Chr8:2589521-2589540 None:intergenic 35.0%
GGAGTAAGATTAAAACAGCT+TGG - Chr8:2589400-2589419 MsG0880042017.01.T01:intron 35.0%
GTAAGATTAAAACAGCTTGG+GGG - Chr8:2589403-2589422 MsG0880042017.01.T01:intron 35.0%
TAGTGTCTGTGATATTGTTC+TGG - Chr8:2587714-2587733 MsG0880042017.01.T01:intron 35.0%
TCAATTCCTGGAAAACATTG+CGG + Chr8:2591663-2591682 None:intergenic 35.0%
TGTTATTGAAGCTGCAAACA+AGG - Chr8:2588352-2588371 MsG0880042017.01.T01:intron 35.0%
TTAAGCTGAATGAGTGAATC+CGG + Chr8:2588576-2588595 None:intergenic 35.0%
TTCGACAACATTTGCACATT+GGG + Chr8:2589720-2589739 None:intergenic 35.0%
TTTCAGTCCAAAAAACGAGA+GGG - Chr8:2590785-2590804 MsG0880042017.01.T01:intron 35.0%
TTTCTTTACAAGCCACTACT+AGG - Chr8:2592262-2592281 MsG0880042017.01.T01:intron 35.0%
! AGTGTAGTTGCTATTACTCA+TGG - Chr8:2588325-2588344 MsG0880042017.01.T01:intron 35.0%
! CAGAGAAAAAAAGCATGGAT+CGG + Chr8:2587083-2587102 None:intergenic 35.0%
! GCAAATGTTGTCGAACATTT+TGG - Chr8:2589725-2589744 MsG0880042017.01.T01:intron 35.0%
! GTGTAGTTGCTATTACTCAT+GGG - Chr8:2588326-2588345 MsG0880042017.01.T01:intron 35.0%
! TTTATTGGTAGCAAAAGTGC+AGG - Chr8:2587980-2587999 MsG0880042017.01.T01:intron 35.0%
! TTTTCAGTCCAAAAAACGAG+AGG - Chr8:2590784-2590803 MsG0880042017.01.T01:intron 35.0%
!! ACTACTTTTCTTGTACCAAC+TGG - Chr8:2591351-2591370 MsG0880042017.01.T01:intron 35.0%
!! CTAGTTCTATAAGCTCTCAT+TGG - Chr8:2589368-2589387 MsG0880042017.01.T01:intron 35.0%
!! CTCATAATATAATGGACAGG+TGG - Chr8:2589674-2589693 MsG0880042017.01.T01:intron 35.0%
!! TCATGTGTTTGATGATGTTG+CGG - Chr8:2587274-2587293 MsG0880042017.01.T01:intron 35.0%
!! TTGTCTTTTCTCAAAAGCAC+AGG + Chr8:2591303-2591322 None:intergenic 35.0%
!!! TGATTTACCCTCTCGTTTTT+TGG + Chr8:2590795-2590814 None:intergenic 35.0%
!!! TTTTCAGGTCACATTAGTGT+TGG - Chr8:2592549-2592568 MsG0880042017.01.T01:intron 35.0%
AAATATCCAGCACGCAATCA+AGG + Chr8:2591726-2591745 None:intergenic 40.0%
AAATTCCCACAAACCCACAA+AGG + Chr8:2592758-2592777 None:intergenic 40.0%
AATATAGAGGCAACAACCTC+AGG + Chr8:2592628-2592647 None:intergenic 40.0%
AATATCCAGCACGCAATCAA+GGG + Chr8:2591725-2591744 None:intergenic 40.0%
ACAAGAAACTCACCAAGACA+TGG + Chr8:2590676-2590695 None:intergenic 40.0%
ACGAGAGAATTATGGTTAGG+AGG - Chr8:2591897-2591916 MsG0880042017.01.T01:intron 40.0%
AGAGAATTATGGTTAGGAGG+TGG - Chr8:2591900-2591919 MsG0880042017.01.T01:intron 40.0%
AGGAAAAATTGTTCCTTCCG+AGG - Chr8:2590134-2590153 MsG0880042017.01.T01:intron 40.0%
AGTGTTGTAAGTGCCTTTGT+GGG - Chr8:2592742-2592761 MsG0880042017.01.T01:five_prime_UTR 40.0%
AGTTGAATATCTTGCCGAGA+GGG + Chr8:2589244-2589263 None:intergenic 40.0%
ATAGTGTAGGGTCTATTACC+TGG + Chr8:2590450-2590469 None:intergenic 40.0%
ATTCATGGTTGTGTCGTACA+TGG - Chr8:2588376-2588395 MsG0880042017.01.T01:intron 40.0%
CAATCAGTGAAACAGGACTA+CGG + Chr8:2589843-2589862 None:intergenic 40.0%
CAGAAGCCTAATTGTTACCT+CGG + Chr8:2590154-2590173 None:intergenic 40.0%
CCTCTGGGCAATCAAAATAT+AGG + Chr8:2590396-2590415 None:intergenic 40.0%
GATTTCGTGCTAGCTGAATT+TGG - Chr8:2587862-2587881 MsG0880042017.01.T01:intron 40.0%
GATTTGATATGATAGGCGGA+TGG - Chr8:2587925-2587944 MsG0880042017.01.T01:intron 40.0%
GGTAGTACATTTATCTGCTC+AGG + Chr8:2590317-2590336 None:intergenic 40.0%
GTTAATTGTACTGCCTTGTG+TGG - Chr8:2587768-2587787 MsG0880042017.01.T01:intron 40.0%
GTTATGGTTAGGATCGTTGA+AGG + Chr8:2586928-2586947 None:intergenic 40.0%
GTTCGACAACATTTGCACAT+TGG + Chr8:2589721-2589740 None:intergenic 40.0%
TAAGCTGAATGAGTGAATCC+GGG + Chr8:2588575-2588594 None:intergenic 40.0%
TCTGCTTGATCTGTAATTGG+TGG - Chr8:2587835-2587854 MsG0880042017.01.T01:intron 40.0%
TGCAAAGCCATGATGCATTT+AGG + Chr8:2590349-2590368 None:intergenic 40.0%
TGTATCAACATGCCAACACT+AGG - Chr8:2591401-2591420 MsG0880042017.01.T01:intron 40.0%
TGTTGCTGTGTTCGATGAAT+TGG - Chr8:2587176-2587195 MsG0880042017.01.T01:intron 40.0%
TTCCTTCCGAGGTAACAATT+AGG - Chr8:2590145-2590164 MsG0880042017.01.T01:intron 40.0%
TTGCGTGCTGGATATTTAAG+AGG - Chr8:2591729-2591748 MsG0880042017.01.T01:intron 40.0%
TTGTTTGCCTCATGTGCTAA+AGG - Chr8:2590692-2590711 MsG0880042017.01.T01:intron 40.0%
! AAAGAAAGGCACATGACTGA+TGG - Chr8:2592164-2592183 MsG0880042017.01.T01:intron 40.0%
! AGCTCTCATTGGAAGCTTTT+TGG - Chr8:2589379-2589398 MsG0880042017.01.T01:intron 40.0%
! AGCTGCAAACAAGGTATTCA+TGG - Chr8:2588361-2588380 MsG0880042017.01.T01:intron 40.0%
! ATCAAATCTGGCTCCGAAAA+TGG - Chr8:2589788-2589807 MsG0880042017.01.T01:intron 40.0%
! ATTAAGTTGCGGTTTGGCAT+TGG - Chr8:2588146-2588165 MsG0880042017.01.T01:intron 40.0%
! GAAGCGATTCAAGGTTTTCT+TGG - Chr8:2590575-2590594 MsG0880042017.01.T01:intron 40.0%
! GTTGTGTTTCTACCATGTCT+TGG - Chr8:2590661-2590680 MsG0880042017.01.T01:intron 40.0%
! TCAAATCTGGCTCCGAAAAT+GGG - Chr8:2589789-2589808 MsG0880042017.01.T01:intron 40.0%
! TGTGTTCCCTCATTAAGTTG+CGG - Chr8:2588135-2588154 MsG0880042017.01.T01:intron 40.0%
! TTCAAACCGCAATGTTTTCC+AGG - Chr8:2591654-2591673 MsG0880042017.01.T01:intron 40.0%
!! TGTTGAGGAGGTATTTGAGT+CGG - Chr8:2590752-2590771 MsG0880042017.01.T01:intron 40.0%
!!! CCTATATTTTGATTGCCCAG+AGG - Chr8:2590393-2590412 MsG0880042017.01.T01:intron 40.0%
!!! TGTTTTAGGTTGATGCTGCA+AGG - Chr8:2590727-2590746 MsG0880042017.01.T01:intron 40.0%
AAGTGCCTTTGTGGGTTTGT+GGG - Chr8:2592750-2592769 MsG0880042017.01.T01:five_prime_UTR 45.0%
ACGACTTCTTAGTAGGAACC+AGG - Chr8:2590429-2590448 MsG0880042017.01.T01:intron 45.0%
AGCCTAATTGTTACCTCGGA+AGG + Chr8:2590150-2590169 None:intergenic 45.0%
CAACAAGCAATGCAAGACAG+TGG - Chr8:2590174-2590193 MsG0880042017.01.T01:intron 45.0%
CAATGCTCAGAAGTTGACGT+TGG + Chr8:2590008-2590027 None:intergenic 45.0%
CAGCTTAAACTCGATGCAGA+TGG + Chr8:2590042-2590061 None:intergenic 45.0%
CAGTTGAATATCTTGCCGAG+AGG + Chr8:2589245-2589264 None:intergenic 45.0%
CTTTCACCAAATGCCACACA+AGG + Chr8:2587784-2587803 None:intergenic 45.0%
GACTCAAATACCTCCTCAAC+AGG + Chr8:2590753-2590772 None:intergenic 45.0%
GCCAAACCGCAACTTAATGA+GGG + Chr8:2588144-2588163 None:intergenic 45.0%
GGACTACGGATCTATCACTA+AGG + Chr8:2589829-2589848 None:intergenic 45.0%
GTCTCTCCATTTCTTCCTCT+GGG + Chr8:2590411-2590430 None:intergenic 45.0%
GTGCTTGGCCTGTATTCTAA+GGG + Chr8:2591563-2591582 None:intergenic 45.0%
TAAGCGGGGTCAGTACTAAT+AGG + Chr8:2588749-2588768 None:intergenic 45.0%
TAAGTGCCTTTGTGGGTTTG+TGG - Chr8:2592749-2592768 MsG0880042017.01.T01:five_prime_UTR 45.0%
TCAACATGCCAACACTAGGA+AGG - Chr8:2591405-2591424 MsG0880042017.01.T01:intron 45.0%
TGAGCATAGCTCATTTGGCA+GGG - Chr8:2588519-2588538 MsG0880042017.01.T01:intron 45.0%
TGATTGCCCAGAGGAAGAAA+TGG - Chr8:2590402-2590421 MsG0880042017.01.T01:intron 45.0%
TGCAAAGGGAAAAGTTCGCA+AGG - Chr8:2590629-2590648 MsG0880042017.01.T01:intron 45.0%
TGCCAAACCGCAACTTAATG+AGG + Chr8:2588145-2588164 None:intergenic 45.0%
TGCCAAATGAGCTATGCTCA+CGG + Chr8:2588519-2588538 None:intergenic 45.0%
TGGAGAGACGACTTCTTAGT+AGG - Chr8:2590422-2590441 MsG0880042017.01.T01:intron 45.0%
TGTGCTTGGCCTGTATTCTA+AGG + Chr8:2591564-2591583 None:intergenic 45.0%
TTTGCGGTCAAATAGCCTAG+TGG + Chr8:2588614-2588633 None:intergenic 45.0%
! ATTTGATTTCCGCTCGCAGA+AGG + Chr8:2589775-2589794 None:intergenic 45.0%
! GAAAGCGCGAAAACGTGAAT+TGG + Chr8:2587024-2587043 None:intergenic 45.0%
! GAGTGTTGTAAGTGCCTTTG+TGG - Chr8:2592741-2592760 MsG0880042017.01.T01:five_prime_UTR 45.0%
! GATAAGGCTTGGTTGTGTTG+TGG - Chr8:2588773-2588792 MsG0880042017.01.T01:intron 45.0%
! TCCCTCATTAAGTTGCGGTT+TGG - Chr8:2588140-2588159 MsG0880042017.01.T01:intron 45.0%
! TGATGGTTTTCCTCGCAATG+AGG - Chr8:2590215-2590234 MsG0880042017.01.T01:intron 45.0%
!! AATATAATGGACAGGTGGCC+CGG - Chr8:2589679-2589698 MsG0880042017.01.T01:intron 45.0%
!! AAAAAAAAGAATTATATAAT+TGG - Chr8:2588634-2588653 MsG0880042017.01.T01:intron 5.0%
!!! TTAAAAAAAATATTTTTTGT+TGG + Chr8:2588701-2588720 None:intergenic 5.0%
!!! TTTTAAAGAATTAAATAATA+TGG - Chr8:2588715-2588734 MsG0880042017.01.T01:intron 5.0%
ATGGTTAGGAGGTGGAGCAA+TGG - Chr8:2591908-2591927 MsG0880042017.01.T01:intron 50.0%
CATTGCAGTATGCAGGTGTC+GGG - Chr8:2588542-2588561 MsG0880042017.01.T01:intron 50.0%
CCAAATGAGCTATGCTCACG+GGG + Chr8:2588517-2588536 None:intergenic 50.0%
CCACTCTCTCAAATGCTGCA+CGG + Chr8:2590245-2590264 None:intergenic 50.0%
CGTCTCTCCATTTCTTCCTC+TGG + Chr8:2590412-2590431 None:intergenic 50.0%
CTCAGAAGTTGACGTTGGTC+AGG + Chr8:2590003-2590022 None:intergenic 50.0%
CTGCGAGCGGAAATCAAATC+TGG - Chr8:2589776-2589795 MsG0880042017.01.T01:intron 50.0%
GCATTGCAGTATGCAGGTGT+CGG - Chr8:2588541-2588560 MsG0880042017.01.T01:intron 50.0%
GCCAAATGAGCTATGCTCAC+GGG + Chr8:2588518-2588537 None:intergenic 50.0%
GTACTGCCTTGTGTGGCATT+TGG - Chr8:2587775-2587794 MsG0880042017.01.T01:intron 50.0%
GTGAGCATAGCTCATTTGGC+AGG - Chr8:2588518-2588537 MsG0880042017.01.T01:intron 50.0%
TCTCTCCTCTTTCGCGCAAA+AGG - Chr8:2586974-2586993 MsG0880042017.01.T01:three_prime_UTR 50.0%
TGGTTAGGAGGTGGAGCAAT+GGG - Chr8:2591909-2591928 MsG0880042017.01.T01:intron 50.0%
! AAGCCTTATCCCACTAAGCG+GGG + Chr8:2588763-2588782 None:intergenic 50.0%
! ATTGCAGTATGCAGGTGTCG+GGG - Chr8:2588543-2588562 MsG0880042017.01.T01:intron 50.0%
! CAAAAGCACAGGTTGTGAGC+CGG + Chr8:2591292-2591311 None:intergenic 50.0%
! CAAGCCTTATCCCACTAAGC+GGG + Chr8:2588764-2588783 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+CGG + Chr8:2588765-2588784 None:intergenic 50.0%
! CGTTACCTTTTGCGCGAAAG+AGG + Chr8:2586982-2587001 None:intergenic 50.0%
! TGCATCATGGCTTTGCAGAC+TGG - Chr8:2590352-2590371 MsG0880042017.01.T01:intron 50.0%
!! ATATAATGGACAGGTGGCCC+GGG - Chr8:2589680-2589699 MsG0880042017.01.T01:intron 50.0%
!! GCGGTGAATTTCTAGCCACT+AGG - Chr8:2588596-2588615 MsG0880042017.01.T01:intron 50.0%
!! TAGTACTGACCCCGCTTAGT+GGG - Chr8:2588751-2588770 MsG0880042017.01.T01:intron 50.0%
!! TGCGGTTTGGCATTGGTGAA+AGG - Chr8:2588153-2588172 MsG0880042017.01.T01:intron 50.0%
!! TTAGTACTGACCCCGCTTAG+TGG - Chr8:2588750-2588769 MsG0880042017.01.T01:intron 50.0%
CCCCGTGAGCATAGCTCATT+TGG - Chr8:2588514-2588533 MsG0880042017.01.T01:intron 55.0%
CCGCTTAGTGGGATAAGGCT+TGG - Chr8:2588762-2588781 MsG0880042017.01.T01:intron 55.0%
CCGTGCAGCATTTGAGAGAG+TGG - Chr8:2590242-2590261 MsG0880042017.01.T01:intron 55.0%
GGGTTTACTCACCTCAGTGC+TGG - Chr8:2589746-2589765 MsG0880042017.01.T01:intron 55.0%
TGACCCCGCTTAGTGGGATA+AGG - Chr8:2588757-2588776 MsG0880042017.01.T01:intron 55.0%
TGATGCTGCAAGGCCTGTTG+AGG - Chr8:2590737-2590756 MsG0880042017.01.T01:intron 55.0%
! GCACGGTTTTCCTCATTGCG+AGG + Chr8:2590228-2590247 None:intergenic 55.0%
GCAGAAGGTCACCAGCACTG+AGG + Chr8:2589760-2589779 None:intergenic 60.0%
TGCTGCAAGGCCTGTTGAGG+AGG - Chr8:2590740-2590759 MsG0880042017.01.T01:intron 60.0%
TGCTGGTGACCTTCTGCGAG+CGG - Chr8:2589763-2589782 MsG0880042017.01.T01:intron 60.0%
TGGGTACCCTTTCCACTGCC+CGG + Chr8:2589701-2589720 None:intergenic 60.0%
TGTCGCCCTTGATTGCGTGC+TGG - Chr8:2591717-2591736 MsG0880042017.01.T01:intron 60.0%
!! GGCAGGGCATTGCAGTATGC+AGG - Chr8:2588535-2588554 MsG0880042017.01.T01:intron 60.0%
GGGTACCCTTTCCACTGCCC+GGG + Chr8:2589700-2589719 None:intergenic 65.0%
!! CAGGTGTCGGGGTTCGAACC+CGG - Chr8:2588554-2588573 MsG0880042017.01.T01:intron 65.0%
AGGTGGCCCGGGCAGTGGAA+AGG - Chr8:2589691-2589710 MsG0880042017.01.T01:intron 70.0%
GGTGGCCCGGGCAGTGGAAA+GGG - Chr8:2589692-2589711 MsG0880042017.01.T01:intron 70.0%
TGGACAGGTGGCCCGGGCAG+TGG - Chr8:2589686-2589705 MsG0880042017.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 2586909 2592820 2586909 ID=MsG0880042017.01;Name=MsG0880042017.01
Chr8 mRNA 2586909 2592820 2586909 ID=MsG0880042017.01.T01;Parent=MsG0880042017.01;Name=MsG0880042017.01.T01;_AED=0.41;_eAED=0.44;_QI=112|0.5|0.77|1|0.87|0.77|9|217|206
Chr8 exon 2586909 2587173 2586909 ID=MsG0880042017.01.T01:exon:1401;Parent=MsG0880042017.01.T01
Chr8 exon 2588923 2588994 2588923 ID=MsG0880042017.01.T01:exon:1400;Parent=MsG0880042017.01.T01
Chr8 exon 2589079 2589184 2589079 ID=MsG0880042017.01.T01:exon:1399;Parent=MsG0880042017.01.T01
Chr8 exon 2589279 2589316 2589279 ID=MsG0880042017.01.T01:exon:1398;Parent=MsG0880042017.01.T01
Chr8 exon 2589466 2589622 2589466 ID=MsG0880042017.01.T01:exon:1397;Parent=MsG0880042017.01.T01
Chr8 exon 2589919 2590036 2589919 ID=MsG0880042017.01.T01:exon:1396;Parent=MsG0880042017.01.T01
Chr8 exon 2591181 2591232 2591181 ID=MsG0880042017.01.T01:exon:1395;Parent=MsG0880042017.01.T01
Chr8 exon 2591356 2591410 2591356 ID=MsG0880042017.01.T01:exon:1394;Parent=MsG0880042017.01.T01
Chr8 exon 2592734 2592820 2592734 ID=MsG0880042017.01.T01:exon:1393;Parent=MsG0880042017.01.T01
Chr8 five_prime_UTR 2592734 2592820 2592734 ID=MsG0880042017.01.T01:five_prime_utr;Parent=MsG0880042017.01.T01
Chr8 five_prime_UTR 2591386 2591410 2591386 ID=MsG0880042017.01.T01:five_prime_utr;Parent=MsG0880042017.01.T01
Chr8 CDS 2591356 2591385 2591356 ID=MsG0880042017.01.T01:cds;Parent=MsG0880042017.01.T01
Chr8 CDS 2591181 2591232 2591181 ID=MsG0880042017.01.T01:cds;Parent=MsG0880042017.01.T01
Chr8 CDS 2589919 2590036 2589919 ID=MsG0880042017.01.T01:cds;Parent=MsG0880042017.01.T01
Chr8 CDS 2589466 2589622 2589466 ID=MsG0880042017.01.T01:cds;Parent=MsG0880042017.01.T01
Chr8 CDS 2589279 2589316 2589279 ID=MsG0880042017.01.T01:cds;Parent=MsG0880042017.01.T01
Chr8 CDS 2589079 2589184 2589079 ID=MsG0880042017.01.T01:cds;Parent=MsG0880042017.01.T01
Chr8 CDS 2588923 2588994 2588923 ID=MsG0880042017.01.T01:cds;Parent=MsG0880042017.01.T01
Chr8 CDS 2587126 2587173 2587126 ID=MsG0880042017.01.T01:cds;Parent=MsG0880042017.01.T01
Chr8 three_prime_UTR 2586909 2587125 2586909 ID=MsG0880042017.01.T01:three_prime_utr;Parent=MsG0880042017.01.T01
Gene Sequence

>MsG0880042017.01.T01

ATGGGAACTGTTATTGAAGCTGCAAACAAGAATTATAGAATTTGGGTCCCCGTGAGCATAGCTCATTTGGCAGGGCATTGCAGTGGCCCGGGCAGTGGAAAGGGTACCCAATGTGCAAATGTTGTCGAACATTTTGGGTTTACTCACCTCAGTGCTGGTGACCTTCTGCGAGCGGAAATCAAATCTGGCTCCGAAAATGGCACAATGATCCAGAATATGATTAAAGAAGGAAAAATTGTTCCTTCCGAGGTAACAATTAGGCTTCTGCAACAAGCAATGCAAGACAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCTCGCAATGAGGAAAACCGTGCAGCATTTGAGAGAGTGAGGAAGAAATGGAGAGACGACTTCTTAGTAGGAACCAGGGTAGAAGACGACAACATTGAAACAATAAGGAAGCGATTCAAGGTTTTCTTGGATTCTAGTCTCCCTGTGATTAACTATTATGATGCAAAGGGAAAAGTTCGCAAGGTTGATGCTGCAAGGCCTGTTGAGGAGGTATTTGAGTCGGTCAAAGCAATTTTCAGTCCAAAAAACGAGAGGGTCACATTAGTGTTGGCTCTGTTATTTTGCCTCACATTTTGTTGCTAG
Protein sequence

>MsG0880042017.01.T01

MGTVIEAANKNYRIWVPVSIAHLAGHCSGPGSGKGTQCANVVEHFGFTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIRLLQQAMQDSGNDKFLIDGFPRNEENRAAFERVRKKWRDDFLVGTRVEDDNIETIRKRFKVFLDSSLPVINYYDAKGKVRKVDAARPVEEVFESVKAIFSPKNERVTLVLALLFCLTFCC*