AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031699.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031699.01.T01 MTR_6g029530 99.102 557 5 0 4 560 123 679 0.0 1152
MsG0680031699.01.T01 MTR_6g029470 63.557 343 119 4 22 360 1 341 2.37e-149 432
MsG0680031699.01.T01 MTR_6g029470 59.690 258 98 4 22 275 1 256 5.93e-98 298
MsG0680031699.01.T01 MTR_1g012760 39.548 177 97 3 374 550 41 207 8.53e-35 133
MsG0680031699.01.T01 MTR_1g012760 39.548 177 97 3 374 550 30 196 1.08e-34 132
MsG0680031699.01.T01 MTR_3g072200 41.463 164 88 2 389 551 55 211 1.26e-31 129
MsG0680031699.01.T01 MTR_3g116710 39.881 168 93 4 374 538 71 233 1.50e-28 114
MsG0680031699.01.T01 MTR_3g077875 36.559 186 99 3 379 557 78 251 2.08e-28 115
MsG0680031699.01.T01 MTR_2g090505 38.150 173 101 3 379 550 83 250 5.95e-28 114
MsG0680031699.01.T01 MTR_7g056020 37.427 171 81 2 379 549 383 527 1.19e-27 117
MsG0680031699.01.T01 MTR_2g023130 33.708 178 71 1 373 550 18 148 1.79e-27 110
MsG0680031699.01.T01 MTR_1g099140 36.416 173 104 3 379 550 83 250 9.00e-26 111
MsG0680031699.01.T01 MTR_3g015530 34.783 161 97 3 379 538 49 202 1.58e-24 103
MsG0680031699.01.T01 MTR_6g464570 38.255 149 85 3 374 520 9 152 2.31e-24 99.8
MsG0680031699.01.T01 MTR_4g057300 41.176 119 69 1 434 551 4 122 3.26e-23 101
MsG0680031699.01.T01 MTR_6g075990 35.294 170 101 3 379 547 78 239 1.36e-22 97.8
MsG0680031699.01.T01 MTR_3g034840 36.601 153 84 3 380 528 69 212 1.57e-22 96.7
MsG0680031699.01.T01 MTR_0599s0020 36.601 153 84 3 380 528 69 212 1.57e-22 96.7
MsG0680031699.01.T01 MTR_4g119600 35.294 170 101 3 379 547 60 221 3.25e-22 98.6
MsG0680031699.01.T01 MTR_5g006100 36.628 172 88 5 394 557 69 227 3.44e-22 101
MsG0680031699.01.T01 MTR_1g058140 40.351 114 67 1 439 552 84 196 6.70e-22 95.1
MsG0680031699.01.T01 MTR_2g067930 38.462 143 80 2 410 551 59 194 1.72e-21 92.8
MsG0680031699.01.T01 MTR_1g081740 32.317 164 75 2 379 542 62 189 2.85e-21 92.0
MsG0680031699.01.T01 MTR_3g067290 29.952 207 126 6 346 545 27 221 3.10e-21 92.8
MsG0680031699.01.T01 MTR_3g087440 37.179 156 79 3 385 533 84 227 3.35e-21 93.2
MsG0680031699.01.T01 MTR_5g046160 36.000 150 72 3 394 542 55 181 8.00e-21 92.8
MsG0680031699.01.T01 MTR_2g461140 34.254 181 83 6 371 550 36 181 3.00e-20 89.0
MsG0680031699.01.T01 MTR_3g462670 37.815 119 73 1 434 551 63 181 4.76e-20 89.7
MsG0680031699.01.T01 MTR_5g046145 36.735 147 78 3 385 530 125 257 2.58e-19 90.1
MsG0680031699.01.T01 MTR_5g031650 28.807 243 137 8 302 529 4 225 4.30e-19 87.0
MsG0680031699.01.T01 MTR_5g032220 32.558 172 96 2 379 550 71 222 2.46e-18 88.6
MsG0680031699.01.T01 MTR_2g026585 31.792 173 82 2 379 551 63 199 3.06e-18 87.0
MsG0680031699.01.T01 MTR_8g107490 31.746 189 108 6 353 538 21 191 8.36e-18 84.7
MsG0680031699.01.T01 MTR_4g057975 31.429 175 98 5 351 523 37 191 1.60e-17 81.6
MsG0680031699.01.T01 MTR_8g445570 37.000 100 62 1 451 550 4 102 1.83e-17 78.6
MsG0680031699.01.T01 MTR_4g120790 33.333 168 75 3 377 544 62 192 2.23e-17 82.0
MsG0680031699.01.T01 MTR_8g020433 37.607 117 70 1 434 550 62 175 4.82e-17 84.3
MsG0680031699.01.T01 MTR_3g030230 40.541 111 64 2 420 529 61 170 4.90e-17 79.3
MsG0680031699.01.T01 MTR_7g065910 34.375 128 72 2 422 546 24 142 8.74e-17 82.8
MsG0680031699.01.T01 MTR_4g051638 36.000 125 72 2 379 502 123 240 1.40e-16 80.1
MsG0680031699.01.T01 MTR_0156s0040 36.434 129 79 1 432 557 2 130 1.84e-16 78.2
MsG0680031699.01.T01 MTR_7g050385 33.333 123 74 2 379 500 114 229 2.20e-16 79.3
MsG0680031699.01.T01 MTR_8g103800 37.374 99 62 0 452 550 96 194 3.28e-16 79.7
MsG0680031699.01.T01 MTR_4g113170 42.045 88 51 0 463 550 74 161 1.04e-15 80.9
MsG0680031699.01.T01 MTR_8g009330 31.953 169 93 4 350 517 65 212 1.10e-15 77.0
MsG0680031699.01.T01 MTR_1g080040 38.318 107 63 1 432 535 1 107 2.17e-15 73.9
MsG0680031699.01.T01 MTR_0528s0010 38.017 121 69 3 440 555 1 120 3.20e-15 73.2
MsG0680031699.01.T01 MTR_7g106560 36.449 107 60 1 453 551 75 181 8.87e-15 73.6
MsG0680031699.01.T01 MTR_1g043440 42.500 80 46 0 470 549 171 250 1.22e-14 75.5
MsG0680031699.01.T01 MTR_1g059880 36.522 115 65 2 375 488 67 174 1.30e-14 73.6
MsG0680031699.01.T01 MTR_7g034570 35.593 118 69 1 427 544 71 181 3.12e-14 71.6
MsG0680031699.01.T01 MTR_5g046245 42.222 90 50 2 462 550 6 94 5.51e-14 72.0
MsG0680031699.01.T01 MTR_0116s0050 25.907 193 93 3 359 551 30 172 1.96e-13 68.9
MsG0680031699.01.T01 MTR_4g100470 41.463 82 48 0 463 544 78 159 2.00e-13 69.7
MsG0680031699.01.T01 MTR_2g027000 41.975 81 45 1 470 548 94 174 2.46e-13 68.9
MsG0680031699.01.T01 MTR_6g089230 34.694 98 46 1 453 550 46 125 2.94e-13 70.1
MsG0680031699.01.T01 MTR_3g437000 36.364 99 55 2 377 474 39 130 4.07e-12 63.9
MsG0680031699.01.T01 MTR_7g024830 44.828 58 32 0 494 551 7 64 4.81e-12 62.0
MsG0680031699.01.T01 MTR_8g028020 43.590 78 40 1 482 555 4 81 5.71e-12 63.5
MsG0680031699.01.T01 MTR_1g098990 27.219 169 85 1 379 547 60 190 9.67e-12 66.2
MsG0680031699.01.T01 MTR_8g038805 38.961 77 46 1 434 509 55 131 1.53e-11 62.4
MsG0680031699.01.T01 MTR_3g467720 39.437 71 43 0 475 545 69 139 3.53e-11 61.6
MsG0680031699.01.T01 MTR_5g079560 32.308 130 64 4 379 501 74 186 4.03e-11 63.9
MsG0680031699.01.T01 MTR_7g060350 38.028 71 44 0 453 523 105 175 4.72e-11 62.4
MsG0680031699.01.T01 MTR_1g052890 35.632 87 56 0 464 550 2 88 6.01e-11 64.3
MsG0680031699.01.T01 MTR_2g030640 47.458 59 31 0 479 537 1 59 6.41e-11 58.5
MsG0680031699.01.T01 MTR_7g050365 31.034 116 55 2 437 551 20 111 7.46e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031699.01.T01 AT5G18200 52.695 334 154 2 28 358 16 348 1.05e-130 385

Find 139 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAAAACAACTGTGATTT+TGG 0.113532 6:+24832343 MsG0680031699.01.T01:CDS
GAAGAAAGCTTCGGACTTTA+AGG 0.118306 6:+24826596 MsG0680031699.01.T01:CDS
GAAAGAACGAATGGTGAATT+AGG 0.182607 6:-24826358 None:intergenic
GTTGGATGGTGGTGAGGTTT+TGG 0.251730 6:+24826797 MsG0680031699.01.T01:CDS
TCAGAATTCAATTACCTCTT+TGG 0.253375 6:-24832118 None:intergenic
GATTCTTCCAGAAGGAGATT+TGG 0.282702 6:-24832945 None:intergenic
CCATTTCATCATCCAATTCA+TGG 0.288659 6:-24830028 None:intergenic
CTCGAGAGTATCTGCTGAAT+TGG 0.290913 6:+24832240 MsG0680031699.01.T01:CDS
AGAATTAGAAATGGAAAATT+CGG 0.308880 6:+24832718 MsG0680031699.01.T01:CDS
CTCTGCACACTTCCATGAAT+TGG 0.309156 6:+24830016 MsG0680031699.01.T01:CDS
ATGAACCGAATTGGAAGATT+AGG 0.317682 6:+24826721 MsG0680031699.01.T01:CDS
ATCTCTCCCAAATCTCCTTC+TGG 0.323139 6:+24832938 MsG0680031699.01.T01:three_prime_UTR
GAAACATTGTTTGGAACAAT+TGG 0.325735 6:-24829828 None:intergenic
ATTCTTCCAGAAGGAGATTT+GGG 0.325851 6:-24832944 None:intergenic
GCGTTTGCCACCAACGGTTT+TGG 0.330783 6:-24826320 None:intergenic
AATCAACTGTTTGGAATGAA+TGG 0.338993 6:+24826550 MsG0680031699.01.T01:CDS
CATCCATCACCATTTCTAAC+AGG 0.340093 6:-24832464 None:intergenic
TCGCAGTTTCAATTACTTCA+TGG 0.342193 6:-24832517 None:intergenic
TTTACCGAAAATCAACTGTT+TGG 0.353650 6:+24826541 MsG0680031699.01.T01:CDS
TAGCCGCATCTCTATGACTT+AGG 0.359446 6:+24826196 MsG0680031699.01.T01:five_prime_UTR
GCAGCATCCTCAGGCAAAAC+AGG 0.393377 6:-24831422 None:intergenic
CTCCTCAAAACCGCCGGATT+CGG 0.396406 6:-24826756 None:intergenic
GATGATGGGTTTGTGTTGGA+TGG 0.399424 6:+24826783 MsG0680031699.01.T01:CDS
AAAGAACGAATGGTGAATTA+GGG 0.400381 6:-24826357 None:intergenic
TGAGTCTATCAAATATGTTC+AGG 0.400935 6:+24826950 MsG0680031699.01.T01:CDS
TGAACCGAATTGGAAGATTA+GGG 0.405403 6:+24826722 MsG0680031699.01.T01:CDS
AGACGGGCAGAAACATTGTT+TGG 0.406511 6:-24829837 None:intergenic
AATGTCTGTAATATGTCTTT+CGG 0.410278 6:-24832617 None:intergenic
AAGAAAGCTTCGGACTTTAA+GGG 0.410858 6:+24826597 MsG0680031699.01.T01:CDS
TAGTAATAGGATCAGAGAAT+TGG 0.415230 6:+24826920 MsG0680031699.01.T01:CDS
TTCCGTTTGATGAACCGAAT+TGG 0.416004 6:+24826712 MsG0680031699.01.T01:CDS
CCATGAATTGGATGATGAAA+TGG 0.416074 6:+24830028 MsG0680031699.01.T01:CDS
TTCTAGATTAGAATTAGAAA+TGG 0.416916 6:+24832709 MsG0680031699.01.T01:CDS
CATTGAGAGTCCTGTGCATT+CGG 0.417283 6:+24826845 MsG0680031699.01.T01:CDS
TAGATTAAAAGTGGAACATC+TGG 0.419148 6:+24832743 MsG0680031699.01.T01:exon
TTCCAATTCGGTTCATCAAA+CGG 0.423615 6:-24826714 None:intergenic
CTGAATTGGGCACGAGCCAT+TGG 0.424435 6:+24832254 MsG0680031699.01.T01:CDS
AACAATGTTTCTGCCCGTCT+TGG 0.431095 6:+24829840 MsG0680031699.01.T01:CDS
CAGAGCTGGCATACAGTCAT+TGG 0.433137 6:+24831330 MsG0680031699.01.T01:CDS
GGAAGTGTGCAGAGTGATAC+CGG 0.436493 6:-24830007 None:intergenic
TGTGCATTCGGAGCAGTTGT+TGG 0.442340 6:+24826857 MsG0680031699.01.T01:CDS
ACTAGTCCATTGCGTGGTGA+TGG 0.443182 6:+24831305 MsG0680031699.01.T01:CDS
CCTCAGCTGATTCCGACAAC+TGG 0.444495 6:+24831368 MsG0680031699.01.T01:CDS
ATCCTTCATATTTCCAAGAC+GGG 0.444712 6:-24829853 None:intergenic
GATGGGTTTGTGTTGGATGG+TGG 0.446729 6:+24826786 MsG0680031699.01.T01:CDS
AGAATCTTTGCAGCATCCTC+AGG 0.453021 6:-24831431 None:intergenic
TCATTCTCATAGTCAAATCC+TGG 0.454234 6:+24829800 MsG0680031699.01.T01:CDS
GATGCATTAGCTCGCAAGAC+TGG 0.455880 6:+24832401 MsG0680031699.01.T01:CDS
ATTTGGATCTTCTTCCTCAT+CGG 0.456914 6:-24826514 None:intergenic
ACAACCCTAATCTTCCAATT+CGG 0.457062 6:-24826726 None:intergenic
TGCCCGTCTTGGAAATATGA+AGG 0.460206 6:+24829851 MsG0680031699.01.T01:CDS
GGTTGTTGAGAGTCCGAATC+CGG 0.461837 6:+24826743 MsG0680031699.01.T01:CDS
ATCAACTGTTTGGAATGAAT+GGG 0.467033 6:+24826551 MsG0680031699.01.T01:CDS
GAGCCATTGGGAGAGAGCAC+GGG 0.469261 6:+24832267 MsG0680031699.01.T01:CDS
TTTGGATGATGGGTTTGTGT+TGG 0.469528 6:+24826779 MsG0680031699.01.T01:CDS
TTGAGATATGGGTTGTTCCC+CGG 0.472936 6:+24829988 MsG0680031699.01.T01:CDS
TCGAGAGTATCTGCTGAATT+GGG 0.475872 6:+24832241 MsG0680031699.01.T01:CDS
CTATAATCCACAATCTTAGT+TGG 0.475886 6:-24832081 None:intergenic
GAATTCAATTACCTCTTTGG+TGG 0.480591 6:-24832115 None:intergenic
AGCCGCATCTCTATGACTTA+GGG 0.484513 6:+24826197 MsG0680031699.01.T01:five_prime_UTR
CGTATAATACGAATCCTAGT+AGG 0.484679 6:+24826628 MsG0680031699.01.T01:CDS
AGAGGAAGACCTGTTAGAAA+TGG 0.484950 6:+24832455 MsG0680031699.01.T01:CDS
AAAACCTCGCCAACATCCTT+CGG 0.485711 6:-24826888 None:intergenic
TGAATTGGGCACGAGCCATT+GGG 0.487838 6:+24832255 MsG0680031699.01.T01:CDS
AGCACAGTCAATTAAAACTA+AGG 0.496819 6:-24832772 None:intergenic
TAGAGATGCGGCTATTTGAA+TGG 0.497177 6:-24826187 None:intergenic
CGAGCCATTGGGAGAGAGCA+CGG 0.499186 6:+24832266 MsG0680031699.01.T01:CDS
TTACAGGCACTTGATCTTGG+AGG 0.500262 6:+24831212 MsG0680031699.01.T01:intron
GTTTGTGTTGGATGGTGGTG+AGG 0.503953 6:+24826791 MsG0680031699.01.T01:CDS
AAGTGGCGAAGAGAAGTCTT+TGG 0.504021 6:+24832565 MsG0680031699.01.T01:CDS
AAAAGACATCTTTCTAAGAG+TGG 0.507146 6:-24831246 None:intergenic
TGCGGCTATTTGAATGGAGA+AGG 0.509695 6:-24826181 None:intergenic
GGAACAACCCATATCTCAAA+AGG 0.510202 6:-24829984 None:intergenic
CCAAGCTCAAAACCAGTTGT+CGG 0.513221 6:-24831380 None:intergenic
AAGTAATTGAAACTGCGATC+GGG 0.517225 6:+24832522 MsG0680031699.01.T01:CDS
GTGTGAATCATAAAGTTGTA+TGG 0.517550 6:-24831284 None:intergenic
TTTACCTCCAACTAAGATTG+TGG 0.530003 6:+24832074 MsG0680031699.01.T01:CDS
ACCATTCGTTCTTTCAACAC+TGG 0.531477 6:+24826366 MsG0680031699.01.T01:CDS
GATTGAAGAAGAGGATAGGA+AGG 0.534376 6:+24832324 MsG0680031699.01.T01:CDS
TATTTGTGACATTCAACTTG+AGG 0.538401 6:+24829902 MsG0680031699.01.T01:CDS
CTAGTCCATTGCGTGGTGAT+GGG 0.539912 6:+24831306 MsG0680031699.01.T01:CDS
GATTTGACGCCGAAGGATGT+TGG 0.540124 6:+24826879 MsG0680031699.01.T01:CDS
CGGAACCAATGAAAAGAAGT+AGG 0.542610 6:-24829946 None:intergenic
AATTCGGCATAGATTAAAAG+TGG 0.542885 6:+24832734 MsG0680031699.01.T01:exon
AGATAAAACGAAGAAAGCTT+CGG 0.545303 6:+24826587 MsG0680031699.01.T01:CDS
TTGGAACAATTGGCAAGCCC+AGG 0.545421 6:-24829818 None:intergenic
ACACACGGCTTATTCCTACT+AGG 0.547965 6:-24826642 None:intergenic
AGAAAGCTTCGGACTTTAAG+GGG 0.551243 6:+24826598 MsG0680031699.01.T01:CDS
GTTGTTGGATTTGACGCCGA+AGG 0.553373 6:+24826872 MsG0680031699.01.T01:CDS
TAATCCACAATCTTAGTTGG+AGG 0.553577 6:-24832078 None:intergenic
ATGAGAACCAAAACCGTTGG+TGG 0.555752 6:+24826313 MsG0680031699.01.T01:CDS
CGAACGGCGTTTGCCACCAA+CGG 0.555890 6:-24826326 None:intergenic
TAACAGGTCTTCCTCTCAGT+CGG 0.558034 6:-24832448 None:intergenic
ACATATGCCGGTCGGCTAAG+TGG 0.558333 6:+24832548 MsG0680031699.01.T01:CDS
AACAACTGCTCCGAATGCAC+AGG 0.558901 6:-24826855 None:intergenic
AATCCTTCATATTTCCAAGA+CGG 0.559891 6:-24829854 None:intergenic
GGTCTTCCTCTCAGTCGGAA+TGG 0.566394 6:-24832443 None:intergenic
TCCAAACTCCTCAAAACCGC+CGG 0.568354 6:-24826762 None:intergenic
AAAGGAAATGAAGCAGCAAA+CGG 0.568655 6:-24829966 None:intergenic
GAAGTGTGCAGAGTGATACC+GGG 0.570950 6:-24830006 None:intergenic
GCGTGGTGATGGGTCAGAGC+TGG 0.574501 6:+24831316 MsG0680031699.01.T01:CDS
CATTCTCATAGTCAAATCCT+GGG 0.575192 6:+24829801 MsG0680031699.01.T01:CDS
GAAGTAATTGAAACTGCGAT+CGG 0.582267 6:+24832521 MsG0680031699.01.T01:CDS
TTCCTGTGTTTGCACATGAA+AGG 0.585708 6:+24831468 MsG0680031699.01.T01:CDS
AAGACTGGAACAAAGAAATG+TGG 0.586177 6:+24832416 MsG0680031699.01.T01:CDS
ACAATGGCGGATTGAAGAAG+AGG 0.587218 6:+24832315 MsG0680031699.01.T01:CDS
CTCTTCGCCACTTAGCCGAC+CGG 0.590945 6:-24832555 None:intergenic
TACCTTTCATGTGCAAACAC+AGG 0.597392 6:-24831470 None:intergenic
ACCATGAGAACCAAAACCGT+TGG 0.597638 6:+24826310 MsG0680031699.01.T01:exon
TGGAAAATATAGACAATACA+AGG 0.599857 6:+24832379 MsG0680031699.01.T01:CDS
AAGCCGTGTGTGTATTGCAT+TGG 0.600783 6:+24826654 MsG0680031699.01.T01:CDS
GCGATCGGGAGCACATATGC+CGG 0.610976 6:+24832536 MsG0680031699.01.T01:CDS
ACCAGTGTTGAAAGAACGAA+TGG 0.618296 6:-24826367 None:intergenic
CTGTTAGAAATGGTGATGGA+TGG 0.620170 6:+24832465 MsG0680031699.01.T01:CDS
AAACCCGTGCTCTCTCCCAA+TGG 0.622311 6:-24832270 None:intergenic
AGACCTGTTAGAAATGGTGA+TGG 0.628565 6:+24832461 MsG0680031699.01.T01:CDS
GACGCCGAAGGATGTTGGCG+AGG 0.629659 6:+24826884 MsG0680031699.01.T01:CDS
TGATGCATTCACCACCAAAG+AGG 0.630981 6:+24832104 MsG0680031699.01.T01:CDS
TGTTGAGAGTCCGAATCCGG+CGG 0.631477 6:+24826746 MsG0680031699.01.T01:CDS
GGCGGATTGAAGAAGAGGAT+AGG 0.632863 6:+24832320 MsG0680031699.01.T01:CDS
GCGGCTATTTGAATGGAGAA+GGG 0.635538 6:-24826180 None:intergenic
TCTGACCCATCACCACGCAA+TGG 0.638701 6:-24831311 None:intergenic
AGACTGGAACAAAGAAATGT+GGG 0.639374 6:+24832417 MsG0680031699.01.T01:CDS
GAAAGATAGATTCTTCCAGA+AGG 0.640993 6:-24832953 None:intergenic
AATTAGGGTTGATTAACGAA+CGG 0.647083 6:-24826342 None:intergenic
TGCCCTAAGTCATAGAGATG+CGG 0.647721 6:-24826199 None:intergenic
CCAGTTGTCGGAATCAGCTG+AGG 0.654012 6:-24831368 None:intergenic
TTCAGCAGATACTCTCGAGT+AGG 0.654168 6:-24832236 None:intergenic
GGGTGTCCATTCCGACTGAG+AGG 0.661322 6:+24832437 MsG0680031699.01.T01:CDS
ATCATTCAAAGATCAGACAA+TGG 0.661996 6:+24832299 MsG0680031699.01.T01:CDS
TGGAAAGTGAACGTAGTGTG+TGG 0.664110 6:+24832485 MsG0680031699.01.T01:CDS
TGACCAATGCAATACACACA+CGG 0.674183 6:-24826657 None:intergenic
TCGGGAGCACATATGCCGGT+CGG 0.680903 6:+24832540 MsG0680031699.01.T01:CDS
TGAATCATAAAGTTGTATGG+CGG 0.697778 6:-24831281 None:intergenic
ATTCAAAGATCAGACAATGG+CGG 0.698505 6:+24832302 MsG0680031699.01.T01:CDS
GCTATTTGAATGGAGAAGGG+AGG 0.699762 6:-24826177 None:intergenic
TCATGAAGATGAATGTAGTG+AGG 0.706412 6:+24826677 MsG0680031699.01.T01:CDS
ATTCACACTAGTCCATTGCG+TGG 0.708834 6:+24831299 MsG0680031699.01.T01:CDS
AAGTGTGCAGAGTGATACCG+GGG 0.743726 6:-24830005 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTTTA+AGG + Chr6:24832140-24832159 MsG0680031699.01.T01:intron 0.0%
!! TTGAAAAATTAAATAAGAAA+TGG + Chr6:24830245-24830264 MsG0680031699.01.T01:intron 10.0%
!!! ATAGAAATTTTGAATTTTTA+GGG + Chr6:24827026-24827045 MsG0680031699.01.T01:intron 10.0%
!!! TATAGAAATTTTGAATTTTT+AGG + Chr6:24827025-24827044 MsG0680031699.01.T01:intron 10.0%
!!! TTATGTTTAGAATAAAATAA+AGG + Chr6:24828272-24828291 MsG0680031699.01.T01:intron 10.0%
!! AAATAAATGTCAAGATATAA+TGG - Chr6:24831193-24831212 None:intergenic 15.0%
!! ATTTATATTTATACAGAACA+AGG - Chr6:24829653-24829672 None:intergenic 15.0%
!! GAATATAGTTGTATTATATT+TGG + Chr6:24830291-24830310 MsG0680031699.01.T01:intron 15.0%
!! TTAATTTATCTATCATTACA+TGG + Chr6:24831786-24831805 MsG0680031699.01.T01:intron 15.0%
!!! GTTTATAATTGTTGTTTTAT+AGG + Chr6:24827048-24827067 MsG0680031699.01.T01:intron 15.0%
!!! TATAATTGTTATTTGACTTT+GGG + Chr6:24829494-24829513 MsG0680031699.01.T01:intron 15.0%
!!! TTATAATTGTTATTTGACTT+TGG + Chr6:24829493-24829512 MsG0680031699.01.T01:intron 15.0%
!!! TTGATTTTATTAATCTTTGA+AGG + Chr6:24829737-24829756 MsG0680031699.01.T01:intron 15.0%
!! AAAAACGAGAATAAATATAG+TGG + Chr6:24830799-24830818 MsG0680031699.01.T01:intron 20.0%
!! ACACTGAATACAAATAAAAA+AGG - Chr6:24829142-24829161 None:intergenic 20.0%
!! AGAATTAGAAATGGAAAATT+CGG + Chr6:24832718-24832737 MsG0680031699.01.T01:CDS 20.0%
!! AGATAAAAAATGTTTCATTG+TGG - Chr6:24827234-24827253 None:intergenic 20.0%
!! ATTGTGAAAAATAAATCCTT+TGG + Chr6:24828684-24828703 MsG0680031699.01.T01:intron 20.0%
!! ATTTAAATCCAGTAAAAATC+TGG - Chr6:24831874-24831893 None:intergenic 20.0%
!! ATTTAGACATGTAATATTGT+TGG + Chr6:24831731-24831750 MsG0680031699.01.T01:intron 20.0%
!! CACTGAATACAAATAAAAAA+GGG - Chr6:24829141-24829160 None:intergenic 20.0%
!! CTTTGAATGATAAATTGAAA+TGG - Chr6:24830519-24830538 None:intergenic 20.0%
!! TTAGGAATTATAGTATAACA+CGG + Chr6:24830349-24830368 MsG0680031699.01.T01:intron 20.0%
!! TTCTAGATTAGAATTAGAAA+TGG + Chr6:24832709-24832728 MsG0680031699.01.T01:CDS 20.0%
!! TTGTGAAAAATAAATCCTTT+GGG + Chr6:24828685-24828704 MsG0680031699.01.T01:intron 20.0%
!! TTTAAATCCAGTAAAAATCT+GGG - Chr6:24831873-24831892 None:intergenic 20.0%
!!! ACTTAAAAGTAGTTTTTCAA+TGG + Chr6:24828315-24828334 MsG0680031699.01.T01:intron 20.0%
!!! ATAGGACATAAATTTTGATT+AGG + Chr6:24830331-24830350 MsG0680031699.01.T01:intron 20.0%
!!! ATATAGTGGAAGAAAATAAA+AGG + Chr6:24830813-24830832 MsG0680031699.01.T01:intron 20.0%
!!! GGTTTCTAAAATTTATGAAT+AGG - Chr6:24829039-24829058 None:intergenic 20.0%
!!! GTATTGTTGAATTTTTTTGA+AGG + Chr6:24832037-24832056 MsG0680031699.01.T01:intron 20.0%
!!! TATCTTGACATTTATTTTAC+AGG + Chr6:24831196-24831215 MsG0680031699.01.T01:intron 20.0%
!!! TATTTATTCTCGTTTTTTCA+CGG - Chr6:24830796-24830815 None:intergenic 20.0%
!!! TTGTATATGTGATTTTTGTA+AGG + Chr6:24828164-24828183 MsG0680031699.01.T01:intron 20.0%
!!! TTGTTGTTTTATAGGAAAAT+TGG + Chr6:24827056-24827075 MsG0680031699.01.T01:intron 20.0%
!!! TTTTGCATTTCAACATAAAT+AGG - Chr6:24830077-24830096 None:intergenic 20.0%
!!! TTTTTGTTGCTTTTAGTAAT+AGG + Chr6:24826907-24826926 MsG0680031699.01.T01:CDS 20.0%
! AACAAGATTAACTATGGTAA+AGG + Chr6:24828740-24828759 MsG0680031699.01.T01:intron 25.0%
! AATGACAAATTACATGAAAC+AGG - Chr6:24829710-24829729 None:intergenic 25.0%
! AATGTCTGTAATATGTCTTT+CGG - Chr6:24832620-24832639 None:intergenic 25.0%
! ACAAATAAAAAAGGGAATGA+AGG - Chr6:24829133-24829152 None:intergenic 25.0%
! AGTATATGAATAACGTGAAA+AGG - Chr6:24831762-24831781 None:intergenic 25.0%
! ATCAGAAATATGTGAATGTT+AGG + Chr6:24830627-24830646 MsG0680031699.01.T01:intron 25.0%
! ATTTATGAATAGGTCCTAAT+TGG - Chr6:24829029-24829048 None:intergenic 25.0%
! CAAAAGTTTATCAAGTGTTA+TGG + Chr6:24831896-24831915 MsG0680031699.01.T01:intron 25.0%
! CATAGTTTCGAGAAAAAAAT+AGG - Chr6:24830583-24830602 None:intergenic 25.0%
! CTTGACATCAAATAATCAAA+TGG + Chr6:24831641-24831660 MsG0680031699.01.T01:intron 25.0%
! GAAATCAATGTTATCAATAG+CGG - Chr6:24829263-24829282 None:intergenic 25.0%
! GTGATAATAATTTCAGAAAG+TGG + Chr6:24827665-24827684 MsG0680031699.01.T01:intron 25.0%
! TAAGCTATGATTTATGATCT+AGG + Chr6:24829466-24829485 MsG0680031699.01.T01:intron 25.0%
! TAATAGACATTGGAATTATG+AGG + Chr6:24831011-24831030 MsG0680031699.01.T01:intron 25.0%
! TCAGAAATATGTGAATGTTA+GGG + Chr6:24830628-24830647 MsG0680031699.01.T01:intron 25.0%
! TCATAATTCCAATGTCTATT+AGG - Chr6:24831012-24831031 None:intergenic 25.0%
! TGGAAAATATAGACAATACA+AGG + Chr6:24832379-24832398 MsG0680031699.01.T01:CDS 25.0%
! TGTGATAATTTCTTCTTTCA+GGG - Chr6:24828896-24828915 None:intergenic 25.0%
! TGTTATTCAGTTACATTTGA+AGG - Chr6:24830401-24830420 None:intergenic 25.0%
! TTACCAACTATATATACATG+TGG + Chr6:24831128-24831147 MsG0680031699.01.T01:intron 25.0%
! TTACCACATGTATATATAGT+TGG - Chr6:24831134-24831153 None:intergenic 25.0%
! TTAGCATCTTGATTGAAATA+TGG + Chr6:24831695-24831714 MsG0680031699.01.T01:intron 25.0%
! TTATTTGATGTCAAGAACTT+AGG - Chr6:24831636-24831655 None:intergenic 25.0%
!! AAAGTACCATTGCAAAAAAA+TGG - Chr6:24832821-24832840 None:intergenic 25.0%
!! AGATAAGAACTTTTACAACA+AGG - Chr6:24829314-24829333 None:intergenic 25.0%
!! AGATGCTAGATCTTTTATAA+GGG + Chr6:24830190-24830209 MsG0680031699.01.T01:intron 25.0%
!! CATAACACTTGATAAACTTT+TGG - Chr6:24831898-24831917 None:intergenic 25.0%
!! GATAAGAACTTTTACAACAA+GGG - Chr6:24829313-24829332 None:intergenic 25.0%
!! TAGATGCTAGATCTTTTATA+AGG + Chr6:24830189-24830208 MsG0680031699.01.T01:intron 25.0%
!! TGAAAGGTATGAAATTTACT+CGG + Chr6:24831484-24831503 MsG0680031699.01.T01:intron 25.0%
!! TTCACGGATTAATAAACATA+GGG - Chr6:24830780-24830799 None:intergenic 25.0%
!! TTTCACGGATTAATAAACAT+AGG - Chr6:24830781-24830800 None:intergenic 25.0%
!!! AAAAAGCATCATAAAACTTC+TGG + Chr6:24830744-24830763 MsG0680031699.01.T01:intron 25.0%
!!! AAGGATTTTTTTTATCAGAC+AGG + Chr6:24829870-24829889 MsG0680031699.01.T01:CDS 25.0%
!!! AAGTTTTGAGATTTGGTTTT+TGG + Chr6:24831956-24831975 MsG0680031699.01.T01:intron 25.0%
!!! AGGATTTTTTTTATCAGACA+GGG + Chr6:24829871-24829890 MsG0680031699.01.T01:CDS 25.0%
!!! CATAAATTTTAGAAACCGAA+TGG + Chr6:24829042-24829061 MsG0680031699.01.T01:intron 25.0%
!!! GTTTCTGAGAGTTTATTTTA+AGG + Chr6:24832010-24832029 MsG0680031699.01.T01:intron 25.0%
!!! TACTTTCCATTTTTTTGCAA+TGG + Chr6:24832812-24832831 MsG0680031699.01.T01:three_prime_UTR 25.0%
!!! TCTCTTTAAGTTTTGAGATT+TGG + Chr6:24831949-24831968 MsG0680031699.01.T01:intron 25.0%
!!! TTCATTTCCTTTTGAGATAT+GGG + Chr6:24829977-24829996 MsG0680031699.01.T01:CDS 25.0%
AAAGAACGAATGGTGAATTA+GGG - Chr6:24826360-24826379 None:intergenic 30.0%
AAGATTAACTATGGTAAAGG+AGG + Chr6:24828743-24828762 MsG0680031699.01.T01:intron 30.0%
AAGTAAGCCTTCAATATAAG+TGG + Chr6:24828855-24828874 MsG0680031699.01.T01:intron 30.0%
AATATGCATGTTTGCCAATT+AGG + Chr6:24829012-24829031 MsG0680031699.01.T01:intron 30.0%
AATCCTTCATATTTCCAAGA+CGG - Chr6:24829857-24829876 None:intergenic 30.0%
AATGAAAGTGAATGTGATAC+TGG + Chr6:24827091-24827110 MsG0680031699.01.T01:intron 30.0%
AATTCGGCATAGATTAAAAG+TGG + Chr6:24832734-24832753 MsG0680031699.01.T01:exon 30.0%
ACAATGCACACAATTGATAA+TGG + Chr6:24828495-24828514 MsG0680031699.01.T01:intron 30.0%
AGAAATATGTGAATGTTAGG+GGG + Chr6:24830630-24830649 MsG0680031699.01.T01:intron 30.0%
AGACTATGAAATTGTGTAGT+TGG + Chr6:24827275-24827294 MsG0680031699.01.T01:intron 30.0%
AGATAAAACGAAGAAAGCTT+CGG + Chr6:24826587-24826606 MsG0680031699.01.T01:CDS 30.0%
AGCACAGTCAATTAAAACTA+AGG - Chr6:24832775-24832794 None:intergenic 30.0%
AGTAAGCCTTCAATATAAGT+GGG + Chr6:24828856-24828875 MsG0680031699.01.T01:intron 30.0%
AGTAATACTCATTGACCATT+CGG - Chr6:24829060-24829079 None:intergenic 30.0%
ATAGTTAATCTTGTTCGAGA+TGG - Chr6:24828735-24828754 None:intergenic 30.0%
ATATGAATAACGTGAAAAGG+AGG - Chr6:24831759-24831778 None:intergenic 30.0%
ATCATTCAAAGATCAGACAA+TGG + Chr6:24832299-24832318 MsG0680031699.01.T01:CDS 30.0%
ATCTCGAACAAGATTAACTA+TGG + Chr6:24828734-24828753 MsG0680031699.01.T01:intron 30.0%
ATGAAATAATTCAGCAGTCT+AGG + Chr6:24830600-24830619 MsG0680031699.01.T01:intron 30.0%
ATTAAGAAAATAAGTCCCAG+AGG - Chr6:24828958-24828977 None:intergenic 30.0%
ATTCAAACCAGATACATTGT+CGG - Chr6:24827409-24827428 None:intergenic 30.0%
CAAAAATCTGCTATGTTAGA+TGG - Chr6:24829235-24829254 None:intergenic 30.0%
CAGAAATATGTGAATGTTAG+GGG + Chr6:24830629-24830648 MsG0680031699.01.T01:intron 30.0%
CTATAATCCACAATCTTAGT+TGG - Chr6:24832084-24832103 None:intergenic 30.0%
CTCACAAAACAACTAATACA+GGG - Chr6:24830153-24830172 None:intergenic 30.0%
GACACTTCTAATATGAAAGT+AGG + Chr6:24829398-24829417 MsG0680031699.01.T01:intron 30.0%
GAGTCTATCAAAAACGTTTA+AGG + Chr6:24827854-24827873 MsG0680031699.01.T01:intron 30.0%
GGTTAATGAAAACGATGAAT+GGG - Chr6:24826414-24826433 None:intergenic 30.0%
GTAAAGATATGTTCCTTAGT+GGG + Chr6:24828643-24828662 MsG0680031699.01.T01:intron 30.0%
GTGTGAATCATAAAGTTGTA+TGG - Chr6:24831287-24831306 None:intergenic 30.0%
GTGTGATAATTTCTTCTTTC+AGG - Chr6:24828897-24828916 None:intergenic 30.0%
TAGATTAAAAGTGGAACATC+TGG + Chr6:24832743-24832762 MsG0680031699.01.T01:exon 30.0%
TAGTAATAGGATCAGAGAAT+TGG + Chr6:24826920-24826939 MsG0680031699.01.T01:CDS 30.0%
TAGTTAATCTTGTTCGAGAT+GGG - Chr6:24828734-24828753 None:intergenic 30.0%
TATCTGGACATGACTTTAAT+TGG + Chr6:24827747-24827766 MsG0680031699.01.T01:intron 30.0%
TATTTGTGACATTCAACTTG+AGG + Chr6:24829902-24829921 MsG0680031699.01.T01:CDS 30.0%
TCAGAATTCAATTACCTCTT+TGG - Chr6:24832121-24832140 None:intergenic 30.0%
TCGTATCACACATGATTTAA+AGG + Chr6:24830127-24830146 MsG0680031699.01.T01:intron 30.0%
TCTCACAAAACAACTAATAC+AGG - Chr6:24830154-24830173 None:intergenic 30.0%
TGAATCATAAAGTTGTATGG+CGG - Chr6:24831284-24831303 None:intergenic 30.0%
TGAGTCTATCAAATATGTTC+AGG + Chr6:24826950-24826969 MsG0680031699.01.T01:CDS 30.0%
TGTAAAGATATGTTCCTTAG+TGG + Chr6:24828642-24828661 MsG0680031699.01.T01:intron 30.0%
TTTACCGAAAATCAACTGTT+TGG + Chr6:24826541-24826560 MsG0680031699.01.T01:CDS 30.0%
TTTAGACAATAACCTCCAAA+CGG - Chr6:24831163-24831182 None:intergenic 30.0%
TTTATCAAGTGTTATGGCAT+TGG + Chr6:24831902-24831921 MsG0680031699.01.T01:intron 30.0%
TTTGGAGGTTATTGTCTAAA+AGG + Chr6:24831163-24831182 MsG0680031699.01.T01:intron 30.0%
! AAAAGACATCTTTCTAAGAG+TGG - Chr6:24831249-24831268 None:intergenic 30.0%
! AAGGAAAACAACTGTGATTT+TGG + Chr6:24832343-24832362 MsG0680031699.01.T01:CDS 30.0%
! AATCAACTGTTTGGAATGAA+TGG + Chr6:24826550-24826569 MsG0680031699.01.T01:CDS 30.0%
! AATGTAGTGAGGAGATTTTT+AGG + Chr6:24826688-24826707 MsG0680031699.01.T01:CDS 30.0%
! AATTAGGGTTGATTAACGAA+CGG - Chr6:24826345-24826364 None:intergenic 30.0%
! ACGTTTTTGATAGACTCAAA+AGG - Chr6:24827851-24827870 None:intergenic 30.0%
! AGGAAAACAACTGTGATTTT+GGG + Chr6:24832344-24832363 MsG0680031699.01.T01:CDS 30.0%
! ATCAACTGTTTGGAATGAAT+GGG + Chr6:24826551-24826570 MsG0680031699.01.T01:CDS 30.0%
! ATCTTCCTACTTCTTTTCAT+TGG + Chr6:24829941-24829960 MsG0680031699.01.T01:CDS 30.0%
! ATGTAGTGAGGAGATTTTTA+GGG + Chr6:24826689-24826708 MsG0680031699.01.T01:CDS 30.0%
! CATCTAACATAGCAGATTTT+TGG + Chr6:24829233-24829252 MsG0680031699.01.T01:intron 30.0%
! CTTGATTGAAATATGGACTA+TGG + Chr6:24831702-24831721 MsG0680031699.01.T01:intron 30.0%
! GAAACATTGTTTGGAACAAT+TGG - Chr6:24829831-24829850 None:intergenic 30.0%
! GATTTTCGGTAAATTGGATT+TGG - Chr6:24826534-24826553 None:intergenic 30.0%
! GGCATTGGAATTTAAATTCT+GGG + Chr6:24831917-24831936 MsG0680031699.01.T01:intron 30.0%
! TATATGTGTAAGTGTTGTGT+CGG + Chr6:24827705-24827724 MsG0680031699.01.T01:intron 30.0%
! TATGTGAGCTTGAATCTTTT+TGG + Chr6:24829345-24829364 MsG0680031699.01.T01:intron 30.0%
! TGAGATTTTTCTCTCTTGTT+TGG + Chr6:24828366-24828385 MsG0680031699.01.T01:intron 30.0%
! TGGCATTGGAATTTAAATTC+TGG + Chr6:24831916-24831935 MsG0680031699.01.T01:intron 30.0%
! TTTTTATCTGACCAGAGAAT+AGG + Chr6:24827245-24827264 MsG0680031699.01.T01:intron 30.0%
!! ACAGTTGATTTTCGGTAAAT+TGG - Chr6:24826540-24826559 None:intergenic 30.0%
!! ACTTTAATTGGAAGTGTCAA+TGG + Chr6:24827759-24827778 MsG0680031699.01.T01:intron 30.0%
!! CATTCCAAACAGTTGATTTT+CGG - Chr6:24826548-24826567 None:intergenic 30.0%
!! TTGAAGGTGTTTAAAAACCA+TGG + Chr6:24829753-24829772 MsG0680031699.01.T01:intron 30.0%
!!! CTATCAGTTTTGAAATTGTG+TGG + Chr6:24827562-24827581 MsG0680031699.01.T01:intron 30.0%
!!! CTATCTGTTTTGAAATTGTG+AGG + Chr6:24827440-24827459 MsG0680031699.01.T01:intron 30.0%
!!! CTTCATTTCCTTTTGAGATA+TGG + Chr6:24829976-24829995 MsG0680031699.01.T01:CDS 30.0%
!!! TATGTTCAGGTTTGTTTTTG+TGG + Chr6:24826963-24826982 MsG0680031699.01.T01:intron 30.0%
!!! TCTGAGAGTTTATTTTAAGG+TGG + Chr6:24832013-24832032 MsG0680031699.01.T01:intron 30.0%
AAAAACCATGGTGAAAAAGC+TGG + Chr6:24829765-24829784 MsG0680031699.01.T01:CDS 35.0%
AAAGGAAATGAAGCAGCAAA+CGG - Chr6:24829969-24829988 None:intergenic 35.0%
AACACAACATAACACAATCC+AGG - Chr6:24830458-24830477 None:intergenic 35.0%
AAGAAAGCTTCGGACTTTAA+GGG + Chr6:24826597-24826616 MsG0680031699.01.T01:CDS 35.0%
AAGACTGGAACAAAGAAATG+TGG + Chr6:24832416-24832435 MsG0680031699.01.T01:CDS 35.0%
AAGTAATTGAAACTGCGATC+GGG + Chr6:24832522-24832541 MsG0680031699.01.T01:CDS 35.0%
AATGGTAGACATCAATCCTA+AGG - Chr6:24828114-24828133 None:intergenic 35.0%
ACAACCCTAATCTTCCAATT+CGG - Chr6:24826729-24826748 None:intergenic 35.0%
ACATGGCAATAATTAGCAAG+AGG + Chr6:24830952-24830971 MsG0680031699.01.T01:intron 35.0%
AGACTGGAACAAAGAAATGT+GGG + Chr6:24832417-24832436 MsG0680031699.01.T01:CDS 35.0%
AGCATCATAAAACTTCTGGT+TGG + Chr6:24830748-24830767 MsG0680031699.01.T01:intron 35.0%
AGCATGTTGGATATACAAGT+AGG + Chr6:24828067-24828086 MsG0680031699.01.T01:intron 35.0%
ATAACCCCCACTTATATTGA+AGG - Chr6:24828865-24828884 None:intergenic 35.0%
ATACAAGTAGGAAGAATGTG+CGG + Chr6:24828079-24828098 MsG0680031699.01.T01:intron 35.0%
ATAGATAAACCCTGTTAGGT+TGG + Chr6:24828035-24828054 MsG0680031699.01.T01:intron 35.0%
ATCACACAAACACTATGCAT+CGG - Chr6:24828800-24828819 None:intergenic 35.0%
ATCCTTCATATTTCCAAGAC+GGG - Chr6:24829856-24829875 None:intergenic 35.0%
ATGAACCGAATTGGAAGATT+AGG + Chr6:24826721-24826740 MsG0680031699.01.T01:CDS 35.0%
ATGGTAAAGGAGGATGTATA+GGG + Chr6:24828753-24828772 MsG0680031699.01.T01:intron 35.0%
ATGTGGTAATTTCTTCCGTT+TGG + Chr6:24831145-24831164 MsG0680031699.01.T01:intron 35.0%
ATTCAAAGATCAGACAATGG+CGG + Chr6:24832302-24832321 MsG0680031699.01.T01:CDS 35.0%
ATTCTTCCAGAAGGAGATTT+GGG - Chr6:24832947-24832966 None:intergenic 35.0%
ATTTGGATCTTCTTCCTCAT+CGG - Chr6:24826517-24826536 None:intergenic 35.0%
CATTCTCATAGTCAAATCCT+GGG + Chr6:24829801-24829820 MsG0680031699.01.T01:CDS 35.0%
CCATGAATTGGATGATGAAA+TGG + Chr6:24830028-24830047 MsG0680031699.01.T01:CDS 35.0%
CCATTTCATCATCCAATTCA+TGG - Chr6:24830031-24830050 None:intergenic 35.0%
CGTATAATACGAATCCTAGT+AGG + Chr6:24826628-24826647 MsG0680031699.01.T01:CDS 35.0%
CTCTCAAATGCACCTAAATA+GGG - Chr6:24831603-24831622 None:intergenic 35.0%
CTTGATAGATAAACCCTGTT+AGG + Chr6:24828031-24828050 MsG0680031699.01.T01:intron 35.0%
GAAAGAACGAATGGTGAATT+AGG - Chr6:24826361-24826380 None:intergenic 35.0%
GAAAGATAGATTCTTCCAGA+AGG - Chr6:24832956-24832975 None:intergenic 35.0%
GAAATGGTGTTTGAATGTCA+TGG + Chr6:24830261-24830280 MsG0680031699.01.T01:intron 35.0%
GAAGTAATTGAAACTGCGAT+CGG + Chr6:24832521-24832540 MsG0680031699.01.T01:CDS 35.0%
GAATTCAATTACCTCTTTGG+TGG - Chr6:24832118-24832137 None:intergenic 35.0%
GATATTAGTCCTTGTTCACT+TGG + Chr6:24828390-24828409 MsG0680031699.01.T01:intron 35.0%
GCAAAAAGGGGTGAAAATTA+GGG - Chr6:24826488-24826507 None:intergenic 35.0%
GCACTTGATAAATAAACCCT+AGG + Chr6:24827792-24827811 MsG0680031699.01.T01:intron 35.0%
GGGTTAATGAAAACGATGAA+TGG - Chr6:24826415-24826434 None:intergenic 35.0%
GTAAGCCTTCAATATAAGTG+GGG + Chr6:24828857-24828876 MsG0680031699.01.T01:intron 35.0%
GTTAGTTAAGTAAAGCCTCT+GGG + Chr6:24828940-24828959 MsG0680031699.01.T01:intron 35.0%
TAAGCCTTCAATATAAGTGG+GGG + Chr6:24828858-24828877 MsG0680031699.01.T01:intron 35.0%
TAATCCACAATCTTAGTTGG+AGG - Chr6:24832081-24832100 None:intergenic 35.0%
TATGGTAAAGGAGGATGTAT+AGG + Chr6:24828752-24828771 MsG0680031699.01.T01:intron 35.0%
TCAGTTGTTAGTATTGTGTC+TGG - Chr6:24827140-24827159 None:intergenic 35.0%
TCATGAAGATGAATGTAGTG+AGG + Chr6:24826677-24826696 MsG0680031699.01.T01:CDS 35.0%
TCATTCTCATAGTCAAATCC+TGG + Chr6:24829800-24829819 MsG0680031699.01.T01:CDS 35.0%
TCGCAGTTTCAATTACTTCA+TGG - Chr6:24832520-24832539 None:intergenic 35.0%
TCTCTCAAATGCACCTAAAT+AGG - Chr6:24831604-24831623 None:intergenic 35.0%
TGAACCGAATTGGAAGATTA+GGG + Chr6:24826722-24826741 MsG0680031699.01.T01:CDS 35.0%
TGCAAAAAGGGGTGAAAATT+AGG - Chr6:24826489-24826508 None:intergenic 35.0%
TGCATAAAAACTCTGAGCTA+TGG + Chr6:24830896-24830915 MsG0680031699.01.T01:intron 35.0%
TGTCCTATCCTGTATGATTA+AGG - Chr6:24830319-24830338 None:intergenic 35.0%
TGTTAGTTAAGTAAAGCCTC+TGG + Chr6:24828939-24828958 MsG0680031699.01.T01:intron 35.0%
TTCAAGGTGGACAAAACAAA+TGG - Chr6:24828132-24828151 None:intergenic 35.0%
TTCCAATTCGGTTCATCAAA+CGG - Chr6:24826717-24826736 None:intergenic 35.0%
TTCTCATGGTTGCGAAAAAT+TGG - Chr6:24826300-24826319 None:intergenic 35.0%
TTGTCTTCATCTATGAAGCA+CGG + Chr6:24827600-24827619 MsG0680031699.01.T01:intron 35.0%
TTTACCTCCAACTAAGATTG+TGG + Chr6:24832074-24832093 MsG0680031699.01.T01:CDS 35.0%
TTTCAATGGAGAATAGCCAT+AGG + Chr6:24828329-24828348 MsG0680031699.01.T01:intron 35.0%
! ATGAAATTGTGTAGTTGGTG+TGG + Chr6:24827280-24827299 MsG0680031699.01.T01:intron 35.0%
! ATTTAGGGCCTAATAGACAT+TGG + Chr6:24831001-24831020 MsG0680031699.01.T01:intron 35.0%
! ATTTTACAGGCACTTGATCT+TGG + Chr6:24831209-24831228 MsG0680031699.01.T01:intron 35.0%
! CAAGACTGTGATGCATTTTA+TGG - Chr6:24830552-24830571 None:intergenic 35.0%
! CAGCAGACAAGTTTGAAATT+AGG - Chr6:24831513-24831532 None:intergenic 35.0%
! GCATCATAAAACTTCTGGTT+GGG + Chr6:24830749-24830768 MsG0680031699.01.T01:intron 35.0%
! TAATTTTCACCCCTTTTTGC+AGG + Chr6:24826488-24826507 MsG0680031699.01.T01:intron 35.0%
! TTGAGCTATAGACACAGTTT+TGG + Chr6:24831082-24831101 MsG0680031699.01.T01:intron 35.0%
! TTTGAAATTGTGAGGTTGGT+GGG + Chr6:24827448-24827467 MsG0680031699.01.T01:intron 35.0%
!! ATTTGGTGCCTTAATCATAC+AGG + Chr6:24830308-24830327 MsG0680031699.01.T01:intron 35.0%
!! CACAATTGATAATGGATGTG+TGG + Chr6:24828503-24828522 MsG0680031699.01.T01:intron 35.0%
!! GTAGTCGAACTTTTTCTAGT+TGG + Chr6:24828553-24828572 MsG0680031699.01.T01:intron 35.0%
!! TAATGGATGTGTGGTCATTT+TGG + Chr6:24828512-24828531 MsG0680031699.01.T01:intron 35.0%
!! TTTTGAGGAGTTTGGATGAT+GGG + Chr6:24826769-24826788 MsG0680031699.01.T01:CDS 35.0%
!!! ATCTAGAACGTTTTAGCTGT+TGG - Chr6:24832697-24832716 None:intergenic 35.0%
!!! ATGTGTGGTCATTTTGGAAT+AGG + Chr6:24828518-24828537 MsG0680031699.01.T01:intron 35.0%
!!! CAGTTTTGAAATTGTGTGGT+TGG + Chr6:24827566-24827585 MsG0680031699.01.T01:intron 35.0%
!!! CTGTTTTGAAATTGTGAGGT+TGG + Chr6:24827444-24827463 MsG0680031699.01.T01:intron 35.0%
!!! GAATCTTTTTGGCTGCTTTA+CGG + Chr6:24829356-24829375 MsG0680031699.01.T01:intron 35.0%
!!! TGAATTTTTTTGAAGGCGCA+TGG + Chr6:24832044-24832063 MsG0680031699.01.T01:intron 35.0%
!!! TTTTGAAATTGTGAGGTTGG+TGG + Chr6:24827447-24827466 MsG0680031699.01.T01:intron 35.0%
AAACCAAATACCTCCCACTA+AGG - Chr6:24828659-24828678 None:intergenic 40.0%
AAGATATGTTCCTTAGTGGG+AGG + Chr6:24828646-24828665 MsG0680031699.01.T01:intron 40.0%
AAGGGGTGAAAATTAGGGTT+AGG - Chr6:24826483-24826502 None:intergenic 40.0%
AATCCAGGTTTACCACACAA+AGG - Chr6:24830443-24830462 None:intergenic 40.0%
ACAGATGCAACAGCTGAATT+TGG + Chr6:24830840-24830859 MsG0680031699.01.T01:intron 40.0%
ACCATTCGTTCTTTCAACAC+TGG + Chr6:24826366-24826385 MsG0680031699.01.T01:CDS 40.0%
AGAAAGCTTCGGACTTTAAG+GGG + Chr6:24826598-24826617 MsG0680031699.01.T01:CDS 40.0%
AGACCTGTTAGAAATGGTGA+TGG + Chr6:24832461-24832480 MsG0680031699.01.T01:CDS 40.0%
AGAGGAAGACCTGTTAGAAA+TGG + Chr6:24832455-24832474 MsG0680031699.01.T01:CDS 40.0%
AGGATGTATAGGGATACAAG+TGG + Chr6:24828763-24828782 MsG0680031699.01.T01:intron 40.0%
AGGGGTGAAAATTAGGGTTA+GGG - Chr6:24826482-24826501 None:intergenic 40.0%
ATACAGAACAAGGCAAGACT+AGG - Chr6:24829643-24829662 None:intergenic 40.0%
ATAGTGTTGCCAGCAAATAG+CGG - Chr6:24829209-24829228 None:intergenic 40.0%
CACTACTCTCACATTACCTA+TGG - Chr6:24828348-24828367 None:intergenic 40.0%
CAGATACATTGTCAATGTCG+CGG - Chr6:24827163-24827182 None:intergenic 40.0%
CATCCATCACCATTTCTAAC+AGG - Chr6:24832467-24832486 None:intergenic 40.0%
CATTACATGGATACGAGAAG+AGG + Chr6:24831799-24831818 MsG0680031699.01.T01:intron 40.0%
CGGAACCAATGAAAAGAAGT+AGG - Chr6:24829949-24829968 None:intergenic 40.0%
CTGTATGCGATGGACATTTA+GGG + Chr6:24830986-24831005 MsG0680031699.01.T01:intron 40.0%
CTTTACGGCTGTGTTTGTAT+GGG + Chr6:24829371-24829390 MsG0680031699.01.T01:intron 40.0%
GAAGAAAGCTTCGGACTTTA+AGG + Chr6:24826596-24826615 MsG0680031699.01.T01:CDS 40.0%
GATTCTTCCAGAAGGAGATT+TGG - Chr6:24832948-24832967 None:intergenic 40.0%
GATTGAAGAAGAGGATAGGA+AGG + Chr6:24832324-24832343 MsG0680031699.01.T01:CDS 40.0%
GGAACAACCCATATCTCAAA+AGG - Chr6:24829987-24830006 None:intergenic 40.0%
GGCACATGACAATTAGAACT+AGG - Chr6:24830380-24830399 None:intergenic 40.0%
GTCGCAATCAATATCATGTC+TGG - Chr6:24827629-24827648 None:intergenic 40.0%
GTCTCAAATCACCTATTCTC+TGG - Chr6:24827259-24827278 None:intergenic 40.0%
GTGAGACTAAGTCCCTATTT+AGG + Chr6:24831588-24831607 MsG0680031699.01.T01:intron 40.0%
GTGCCTTAATCATACAGGAT+AGG + Chr6:24830313-24830332 MsG0680031699.01.T01:intron 40.0%
GTTAGTATTGTGTCTGGTGT+CGG - Chr6:24827134-24827153 None:intergenic 40.0%
TAACAGGTGAACTCAGAACA+TGG + Chr6:24830935-24830954 MsG0680031699.01.T01:intron 40.0%
TACCTTTCATGTGCAAACAC+AGG - Chr6:24831473-24831492 None:intergenic 40.0%
TAGAGATGCGGCTATTTGAA+TGG - Chr6:24826190-24826209 None:intergenic 40.0%
TATATGTGTCAGTGTCGTGT+TGG + Chr6:24827939-24827958 MsG0680031699.01.T01:intron 40.0%
TCACACAAACACTATGCATC+GGG - Chr6:24828799-24828818 None:intergenic 40.0%
TCTGTTGCTCAAACAACCTA+GGG - Chr6:24827811-24827830 None:intergenic 40.0%
TGACCAATGCAATACACACA+CGG - Chr6:24826660-24826679 None:intergenic 40.0%
TGCATCACAGTCTTGAATCA+TGG + Chr6:24830557-24830576 MsG0680031699.01.T01:intron 40.0%
TGGCTTAGTGGAACTATTCT+AGG + Chr6:24828425-24828444 MsG0680031699.01.T01:intron 40.0%
TGGTAATTTCTTCCGTTTGG+AGG + Chr6:24831148-24831167 MsG0680031699.01.T01:intron 40.0%
TTATGACGGTTGTCTTCTTC+TGG + Chr6:24829682-24829701 MsG0680031699.01.T01:intron 40.0%
TTCCGTTTGATGAACCGAAT+TGG + Chr6:24826712-24826731 MsG0680031699.01.T01:CDS 40.0%
TTCCTGTGTTTGCACATGAA+AGG + Chr6:24831468-24831487 MsG0680031699.01.T01:CDS 40.0%
TTCTGTTGCTCAAACAACCT+AGG - Chr6:24827812-24827831 None:intergenic 40.0%
TTTACGGCTGTGTTTGTATG+GGG + Chr6:24829372-24829391 MsG0680031699.01.T01:intron 40.0%
! AAATAGCGGAAGCTACAAAG+TGG - Chr6:24829195-24829214 None:intergenic 40.0%
! ACCAGTGTTGAAAGAACGAA+TGG - Chr6:24826370-24826389 None:intergenic 40.0%
! CAAGGGACACAAAGTTTTCA+AGG - Chr6:24829296-24829315 None:intergenic 40.0%
! CGGATCTAATCTGAAGTATC+TGG + Chr6:24827731-24827750 MsG0680031699.01.T01:intron 40.0%
! GTTTTTATGCAGTTCCAGTC+AGG - Chr6:24830887-24830906 None:intergenic 40.0%
! TGTTTTGTCCACCTTGAACA+AGG + Chr6:24828134-24828153 MsG0680031699.01.T01:intron 40.0%
! TTGAAATTGTGTGGTTGGTG+TGG + Chr6:24827571-24827590 MsG0680031699.01.T01:intron 40.0%
!! CTGTTAGAAATGGTGATGGA+TGG + Chr6:24832465-24832484 MsG0680031699.01.T01:CDS 40.0%
!! TCATCGGTTTCCTGCAAAAA+GGG - Chr6:24826501-24826520 None:intergenic 40.0%
!! TCGAGAGTATCTGCTGAATT+GGG + Chr6:24832241-24832260 MsG0680031699.01.T01:CDS 40.0%
!! TTGAAATTGTGAGGTTGGTG+GGG + Chr6:24827449-24827468 MsG0680031699.01.T01:intron 40.0%
!! TTGGTAGCCCAGATTTTTAC+TGG + Chr6:24831863-24831882 MsG0680031699.01.T01:intron 40.0%
!! TTTGGATGATGGGTTTGTGT+TGG + Chr6:24826779-24826798 MsG0680031699.01.T01:CDS 40.0%
!!! ATTTTGGGTTGCGAAAGAAG+TGG + Chr6:24832359-24832378 MsG0680031699.01.T01:CDS 40.0%
!!! ATTTTTTTGAAGGCGCATGG+TGG + Chr6:24832047-24832066 MsG0680031699.01.T01:intron 40.0%
!!! GTTTTGAGGAGTTTGGATGA+TGG + Chr6:24826768-24826787 MsG0680031699.01.T01:CDS 40.0%
!!! TTTTTTTGAAGGCGCATGGT+GGG + Chr6:24832048-24832067 MsG0680031699.01.T01:intron 40.0%
AAAACCTCGCCAACATCCTT+CGG - Chr6:24826891-24826910 None:intergenic 45.0%
AAGCCGTGTGTGTATTGCAT+TGG + Chr6:24826654-24826673 MsG0680031699.01.T01:CDS 45.0%
AAGTGGCGAAGAGAAGTCTT+TGG + Chr6:24832565-24832584 MsG0680031699.01.T01:CDS 45.0%
ACAAGAGCCAACCTTGTTCA+AGG - Chr6:24828148-24828167 None:intergenic 45.0%
ACACACGGCTTATTCCTACT+AGG - Chr6:24826645-24826664 None:intergenic 45.0%
ACCATGAGAACCAAAACCGT+TGG + Chr6:24826310-24826329 MsG0680031699.01.T01:exon 45.0%
ACCTTGTTGCTGAGTGCTTA+AGG - Chr6:24828587-24828606 None:intergenic 45.0%
ACTTCCTACTTTCAGCAGCA+TGG - Chr6:24828623-24828642 None:intergenic 45.0%
AGAACAAGCTGTGGTGTAAC+AGG + Chr6:24830919-24830938 MsG0680031699.01.T01:intron 45.0%
AGAATCTTTGCAGCATCCTC+AGG - Chr6:24831434-24831453 None:intergenic 45.0%
AGACGGGCAGAAACATTGTT+TGG - Chr6:24829840-24829859 None:intergenic 45.0%
AGCCGCATCTCTATGACTTA+GGG + Chr6:24826197-24826216 MsG0680031699.01.T01:five_prime_UTR 45.0%
AGTGACACCGACAATGTATC+TGG + Chr6:24827399-24827418 MsG0680031699.01.T01:intron 45.0%
ATCAGTATCGTGTCTGGTGT+CGG - Chr6:24827379-24827398 None:intergenic 45.0%
ATCTCTCCCAAATCTCCTTC+TGG + Chr6:24832938-24832957 MsG0680031699.01.T01:three_prime_UTR 45.0%
ATGAGAACCAAAACCGTTGG+TGG + Chr6:24826313-24826332 MsG0680031699.01.T01:CDS 45.0%
ATTCACACTAGTCCATTGCG+TGG + Chr6:24831299-24831318 MsG0680031699.01.T01:CDS 45.0%
CAGTCAAGCCAAGACATTGT+TGG + Chr6:24831844-24831863 MsG0680031699.01.T01:intron 45.0%
CATTGAGAGTCCTGTGCATT+CGG + Chr6:24826845-24826864 MsG0680031699.01.T01:CDS 45.0%
CATTGCATGCCAAGTGAACA+AGG - Chr6:24828402-24828421 None:intergenic 45.0%
CCAAGCTCAAAACCAGTTGT+CGG - Chr6:24831383-24831402 None:intergenic 45.0%
CCTAAATGTCCATCGCATAC+AGG - Chr6:24830988-24831007 None:intergenic 45.0%
CCTGTATGCGATGGACATTT+AGG + Chr6:24830985-24831004 MsG0680031699.01.T01:intron 45.0%
CTCTGCACACTTCCATGAAT+TGG + Chr6:24830016-24830035 MsG0680031699.01.T01:CDS 45.0%
GATGCAACAGCTGAATTTGG+TGG + Chr6:24830843-24830862 MsG0680031699.01.T01:intron 45.0%
GCGGCTATTTGAATGGAGAA+GGG - Chr6:24826183-24826202 None:intergenic 45.0%
GCTATTTGAATGGAGAAGGG+AGG - Chr6:24826180-24826199 None:intergenic 45.0%
GCTTTACGGCTGTGTTTGTA+TGG + Chr6:24829370-24829389 MsG0680031699.01.T01:intron 45.0%
GTCACTATCAGTATCGTGTC+TGG - Chr6:24827385-24827404 None:intergenic 45.0%
GTGACTCTTTGTGTCAGCTT+AGG + Chr6:24831561-24831580 MsG0680031699.01.T01:intron 45.0%
GTGTGCATTGTTCGTCCTTA+AGG - Chr6:24828486-24828505 None:intergenic 45.0%
TAACAGGTCTTCCTCTCAGT+CGG - Chr6:24832451-24832470 None:intergenic 45.0%
TAAGCACTCAGCAACAAGGT+CGG + Chr6:24828587-24828606 MsG0680031699.01.T01:intron 45.0%
TAATATCACCCCATCGTGTC+TGG - Chr6:24827338-24827357 None:intergenic 45.0%
TAGCCGCATCTCTATGACTT+AGG + Chr6:24826196-24826215 MsG0680031699.01.T01:five_prime_UTR 45.0%
TCCACTCTACCAACCTAACA+GGG - Chr6:24828047-24828066 None:intergenic 45.0%
TCCTTAAGCACTCAGCAACA+AGG + Chr6:24828583-24828602 MsG0680031699.01.T01:intron 45.0%
TGATGCATTCACCACCAAAG+AGG + Chr6:24832104-24832123 MsG0680031699.01.T01:CDS 45.0%
TGCCCGTCTTGGAAATATGA+AGG + Chr6:24829851-24829870 MsG0680031699.01.T01:CDS 45.0%
TGCCCTAAGTCATAGAGATG+CGG - Chr6:24826202-24826221 None:intergenic 45.0%
TGCGGCTATTTGAATGGAGA+AGG - Chr6:24826184-24826203 None:intergenic 45.0%
TGGAAAGTGAACGTAGTGTG+TGG + Chr6:24832485-24832504 MsG0680031699.01.T01:CDS 45.0%
TGTCAATGTCCTGTATGCGA+TGG + Chr6:24830976-24830995 MsG0680031699.01.T01:intron 45.0%
TGTTCACTTGGCATGCAATG+AGG + Chr6:24828402-24828421 MsG0680031699.01.T01:intron 45.0%
TTACAGGCACTTGATCTTGG+AGG + Chr6:24831212-24831231 MsG0680031699.01.T01:intron 45.0%
TTCACACATCTGCCTTTGTG+TGG + Chr6:24830428-24830447 MsG0680031699.01.T01:intron 45.0%
TTCAGCAGATACTCTCGAGT+AGG - Chr6:24832239-24832258 None:intergenic 45.0%
TTCCACTCTACCAACCTAAC+AGG - Chr6:24828048-24828067 None:intergenic 45.0%
TTGTAGCTTCCGCTATTTGC+TGG + Chr6:24829197-24829216 MsG0680031699.01.T01:intron 45.0%
TTGTCCACCTTGAACAAGGT+TGG + Chr6:24828138-24828157 MsG0680031699.01.T01:intron 45.0%
! AACAATGTTTCTGCCCGTCT+TGG + Chr6:24829840-24829859 MsG0680031699.01.T01:CDS 45.0%
! CATCAATCCTGTTTTGCCTG+AGG + Chr6:24831415-24831434 MsG0680031699.01.T01:CDS 45.0%
! CTTTTTGCAGGAAACCGATG+AGG + Chr6:24826500-24826519 MsG0680031699.01.T01:intron 45.0%
! GATAGTGGCTAAGAGCATGA+TGG + Chr6:24830671-24830690 MsG0680031699.01.T01:intron 45.0%
! GTGATCGTTTTGCATCTCGA+AGG + Chr6:24828815-24828834 MsG0680031699.01.T01:intron 45.0%
! GTGCTTCACATCACTGACTA+TGG + Chr6:24829555-24829574 MsG0680031699.01.T01:intron 45.0%
! TCAGTGTCGTGTTGGTGTTT+GGG + Chr6:24827947-24827966 MsG0680031699.01.T01:intron 45.0%
! TGTAAGTGTTGTGTCGGTGT+CGG + Chr6:24827711-24827730 MsG0680031699.01.T01:intron 45.0%
! TTGAGATATGGGTTGTTCCC+CGG + Chr6:24829988-24830007 MsG0680031699.01.T01:CDS 45.0%
! TTGGTAGAGTGGAAGCATGT+TGG + Chr6:24828054-24828073 MsG0680031699.01.T01:intron 45.0%
!! ACAATGGCGGATTGAAGAAG+AGG + Chr6:24832315-24832334 MsG0680031699.01.T01:CDS 45.0%
!! CATCGGTTTCCTGCAAAAAG+GGG - Chr6:24826500-24826519 None:intergenic 45.0%
!! CTCATCGGTTTCCTGCAAAA+AGG - Chr6:24826502-24826521 None:intergenic 45.0%
!! CTCGAGAGTATCTGCTGAAT+TGG + Chr6:24832240-24832259 MsG0680031699.01.T01:CDS 45.0%
!! GATGATGGGTTTGTGTTGGA+TGG + Chr6:24826783-24826802 MsG0680031699.01.T01:CDS 45.0%
!! GTTCCTTAGTGGGAGGTATT+TGG + Chr6:24828653-24828672 MsG0680031699.01.T01:intron 45.0%
!!! ACCAACGGTTTTGGTTCTCA+TGG - Chr6:24826314-24826333 None:intergenic 45.0%
!!! ACTGGTTTTGAGCTTGGAAC+TGG + Chr6:24831386-24831405 MsG0680031699.01.T01:CDS 45.0%
!!! ATGGTGGTGAGGTTTTGGAT+GGG + Chr6:24826802-24826821 MsG0680031699.01.T01:CDS 45.0%
!!! CTGGTTTTGAGCTTGGAACT+GGG + Chr6:24831387-24831406 MsG0680031699.01.T01:CDS 45.0%
!!! GAATGGGAGTGTCGTTTTGA+AGG - Chr6:24826398-24826417 None:intergenic 45.0%
!!! GTGAGGTTTTGGATGGGTTT+GGG + Chr6:24826808-24826827 MsG0680031699.01.T01:CDS 45.0%
!! AAAAAATTGAAAAAAAAATT+AGG - Chr6:24826436-24826455 None:intergenic 5.0%
!! AAAAATTGAAAAAAAAATTA+GGG - Chr6:24826435-24826454 None:intergenic 5.0%
!! TAAATATAAATATATTATGA+CGG + Chr6:24829668-24829687 MsG0680031699.01.T01:intron 5.0%
!!! TTCTATTAATTTTTATTTTT+AGG + Chr6:24832208-24832227 MsG0680031699.01.T01:intron 5.0%
AACAACTGCTCCGAATGCAC+AGG - Chr6:24826858-24826877 None:intergenic 50.0%
AAGTGTGCAGAGTGATACCG+GGG - Chr6:24830008-24830027 None:intergenic 50.0%
ACTAGTCCATTGCGTGGTGA+TGG + Chr6:24831305-24831324 MsG0680031699.01.T01:CDS 50.0%
AGAGCCAACCTTGTTCAAGG+TGG - Chr6:24828145-24828164 None:intergenic 50.0%
AGCACAGTGAGTCGTGATAG+TGG + Chr6:24830656-24830675 MsG0680031699.01.T01:intron 50.0%
AGCGTGGCTCAATTACTGAG+AGG - Chr6:24829107-24829126 None:intergenic 50.0%
AGTAGGAAGAATGTGCGGAG+TGG + Chr6:24828084-24828103 MsG0680031699.01.T01:intron 50.0%
CAAGGCTTGACATCACCCAA+AGG - Chr6:24828703-24828722 None:intergenic 50.0%
CAGAGCTGGCATACAGTCAT+TGG + Chr6:24831330-24831349 MsG0680031699.01.T01:CDS 50.0%
CATGCAATGAGGTGGCTTAG+TGG + Chr6:24828413-24828432 MsG0680031699.01.T01:intron 50.0%
CTAGTCCATTGCGTGGTGAT+GGG + Chr6:24831306-24831325 MsG0680031699.01.T01:CDS 50.0%
CTGAAATCGTGTCCAGACTC+CGG - Chr6:24827985-24828004 None:intergenic 50.0%
CTGCCTTTGTGTGGTAAACC+TGG + Chr6:24830437-24830456 MsG0680031699.01.T01:intron 50.0%
CTGGGCTACCAACAATGTCT+TGG - Chr6:24831855-24831874 None:intergenic 50.0%
GAAGTGTGCAGAGTGATACC+GGG - Chr6:24830009-24830028 None:intergenic 50.0%
GAGCTATGGAGAACAAGCTG+TGG + Chr6:24830910-24830929 MsG0680031699.01.T01:intron 50.0%
GATGCATTAGCTCGCAAGAC+TGG + Chr6:24832401-24832420 MsG0680031699.01.T01:CDS 50.0%
GATTTGACGCCGAAGGATGT+TGG + Chr6:24826879-24826898 MsG0680031699.01.T01:CDS 50.0%
GCTTCCTTGTTGCTGCCTTA+AGG + Chr6:24828468-24828487 MsG0680031699.01.T01:intron 50.0%
GGAACCATGCTGCTGAAAGT+AGG + Chr6:24828616-24828635 MsG0680031699.01.T01:intron 50.0%
GGTTGTTGAGAGTCCGAATC+CGG + Chr6:24826743-24826762 MsG0680031699.01.T01:CDS 50.0%
GTTCCAGTCAGGTCACCTAA+CGG - Chr6:24830876-24830895 None:intergenic 50.0%
GTTGTTGGATTTGACGCCGA+AGG + Chr6:24826872-24826891 MsG0680031699.01.T01:CDS 50.0%
TCACTTGGCATGCAATGAGG+TGG + Chr6:24828405-24828424 MsG0680031699.01.T01:intron 50.0%
TCCAAACTCCTCAAAACCGC+CGG - Chr6:24826765-24826784 None:intergenic 50.0%
TCGTCCTTAAGGCAGCAACA+AGG - Chr6:24828475-24828494 None:intergenic 50.0%
TGAATTGGGCACGAGCCATT+GGG + Chr6:24832255-24832274 MsG0680031699.01.T01:CDS 50.0%
TGTGCATTCGGAGCAGTTGT+TGG + Chr6:24826857-24826876 MsG0680031699.01.T01:CDS 50.0%
TGTGCGGAGTGGTATACCTT+AGG + Chr6:24828095-24828114 MsG0680031699.01.T01:intron 50.0%
TTGGAACAATTGGCAAGCCC+AGG - Chr6:24829821-24829840 None:intergenic 50.0%
! GATGGGTTTGTGTTGGATGG+TGG + Chr6:24826786-24826805 MsG0680031699.01.T01:CDS 50.0%
! GGAAGTGTGCAGAGTGATAC+CGG - Chr6:24830010-24830029 None:intergenic 50.0%
! GTCAGTGTCGTGTTGGTGTT+TGG + Chr6:24827946-24827965 MsG0680031699.01.T01:intron 50.0%
! GTTTGTGTTGGATGGTGGTG+AGG + Chr6:24826791-24826810 MsG0680031699.01.T01:CDS 50.0%
! TCGTGTTGGTGTTTGGGCAT+TGG + Chr6:24827953-24827972 MsG0680031699.01.T01:intron 50.0%
! TGTCTGGTGTCAGTGCTTCA+TGG - Chr6:24827322-24827341 None:intergenic 50.0%
! TTTGGTGGTCACAGTCCGTT+AGG + Chr6:24830858-24830877 MsG0680031699.01.T01:intron 50.0%
!! ACCCTGTTAGGTTGGTAGAG+TGG + Chr6:24828043-24828062 MsG0680031699.01.T01:intron 50.0%
!! GGCGGATTGAAGAAGAGGAT+AGG + Chr6:24832320-24832339 MsG0680031699.01.T01:CDS 50.0%
!! GTTGGATGGTGGTGAGGTTT+TGG + Chr6:24826797-24826816 MsG0680031699.01.T01:CDS 50.0%
!!! CCGACAACTGGTTTTGAGCT+TGG + Chr6:24831380-24831399 MsG0680031699.01.T01:CDS 50.0%
!!! CTGCACCAGCTTTTTCACCA+TGG - Chr6:24829773-24829792 None:intergenic 50.0%
!!! GATGGTGGTGAGGTTTTGGA+TGG + Chr6:24826801-24826820 MsG0680031699.01.T01:CDS 50.0%
!!! GGTGAGGTTTTGGATGGGTT+TGG + Chr6:24826807-24826826 MsG0680031699.01.T01:CDS 50.0%
AAACCCGTGCTCTCTCCCAA+TGG - Chr6:24832273-24832292 None:intergenic 55.0%
AAGGGAATGAAGGCAGAGCG+TGG - Chr6:24829123-24829142 None:intergenic 55.0%
ACATATGCCGGTCGGCTAAG+TGG + Chr6:24832548-24832567 MsG0680031699.01.T01:CDS 55.0%
AGTCCGTTAGGTGACCTGAC+TGG + Chr6:24830870-24830889 MsG0680031699.01.T01:intron 55.0%
CACTGACACCAGACACGATG+GGG + Chr6:24827327-24827346 MsG0680031699.01.T01:intron 55.0%
CCAGTTGTCGGAATCAGCTG+AGG - Chr6:24831371-24831390 None:intergenic 55.0%
CTCCTCAAAACCGCCGGATT+CGG - Chr6:24826759-24826778 None:intergenic 55.0%
CTGAATTGGGCACGAGCCAT+TGG + Chr6:24832254-24832273 MsG0680031699.01.T01:CDS 55.0%
GCAGCATCCTCAGGCAAAAC+AGG - Chr6:24831425-24831444 None:intergenic 55.0%
GGTCTTCCTCTCAGTCGGAA+TGG - Chr6:24832446-24832465 None:intergenic 55.0%
TCTGACCCATCACCACGCAA+TGG - Chr6:24831314-24831333 None:intergenic 55.0%
TGTTGAGAGTCCGAATCCGG+CGG + Chr6:24826746-24826765 MsG0680031699.01.T01:CDS 55.0%
! CAGCAACAAGGTCGGCTTAG+TGG + Chr6:24828595-24828614 MsG0680031699.01.T01:intron 55.0%
! CCTCAGCTGATTCCGACAAC+TGG + Chr6:24831368-24831387 MsG0680031699.01.T01:CDS 55.0%
! GCACTGACACCAGACACGAT+GGG + Chr6:24827326-24827345 MsG0680031699.01.T01:intron 55.0%
! GCGTTTGCCACCAACGGTTT+TGG - Chr6:24826323-24826342 None:intergenic 55.0%
!! AGCACTGACACCAGACACGA+TGG + Chr6:24827325-24827344 MsG0680031699.01.T01:intron 55.0%
!! TCGAGATGGGCTGAGCAACA+AGG - Chr6:24828721-24828740 None:intergenic 55.0%
!!! TCCGGCGGTTTTGAGGAGTT+TGG + Chr6:24826761-24826780 MsG0680031699.01.T01:CDS 55.0%
CGAACGGCGTTTGCCACCAA+CGG - Chr6:24826329-24826348 None:intergenic 60.0%
CGAGCCATTGGGAGAGAGCA+CGG + Chr6:24832266-24832285 MsG0680031699.01.T01:CDS 60.0%
CTCTTCGCCACTTAGCCGAC+CGG - Chr6:24832558-24832577 None:intergenic 60.0%
GGGTGTCCATTCCGACTGAG+AGG + Chr6:24832437-24832456 MsG0680031699.01.T01:CDS 60.0%
! GAGCCATTGGGAGAGAGCAC+GGG + Chr6:24832267-24832286 MsG0680031699.01.T01:CDS 60.0%
! GCGATCGGGAGCACATATGC+CGG + Chr6:24832536-24832555 MsG0680031699.01.T01:CDS 60.0%
! GTCCGAATCCGGCGGTTTTG+AGG + Chr6:24826754-24826773 MsG0680031699.01.T01:CDS 60.0%
! TCGGGAGCACATATGCCGGT+CGG + Chr6:24832540-24832559 MsG0680031699.01.T01:CDS 60.0%
!! GTTTGGGCATTGGCATGCGC+CGG + Chr6:24827963-24827982 MsG0680031699.01.T01:intron 60.0%
CATTGGCATGCGCCGGAGTC+TGG + Chr6:24827970-24827989 MsG0680031699.01.T01:intron 65.0%
GACGCCGAAGGATGTTGGCG+AGG + Chr6:24826884-24826903 MsG0680031699.01.T01:CDS 65.0%
!! GCGTGGTGATGGGTCAGAGC+TGG + Chr6:24831316-24831335 MsG0680031699.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 24826155 24832979 24826155 ID=MsG0680031699.01;Name=MsG0680031699.01
Chr6 mRNA 24826155 24832979 24826155 ID=MsG0680031699.01.T01;Parent=MsG0680031699.01;Name=MsG0680031699.01.T01;_AED=0.35;_eAED=0.35;_QI=158|1|1|1|1|1|6|234|560
Chr6 exon 24826155 24826387 24826155 ID=MsG0680031699.01.T01:exon:15337;Parent=MsG0680031699.01.T01
Chr6 exon 24826510 24826971 24826510 ID=MsG0680031699.01.T01:exon:15338;Parent=MsG0680031699.01.T01
Chr6 exon 24829759 24830049 24829759 ID=MsG0680031699.01.T01:exon:15339;Parent=MsG0680031699.01.T01
Chr6 exon 24831218 24831489 24831218 ID=MsG0680031699.01.T01:exon:15340;Parent=MsG0680031699.01.T01
Chr6 exon 24832059 24832125 24832059 ID=MsG0680031699.01.T01:exon:15341;Parent=MsG0680031699.01.T01
Chr6 exon 24832230 24832979 24832230 ID=MsG0680031699.01.T01:exon:15342;Parent=MsG0680031699.01.T01
Chr6 five_prime_UTR 24826155 24826312 24826155 ID=MsG0680031699.01.T01:five_prime_utr;Parent=MsG0680031699.01.T01
Chr6 CDS 24826313 24826387 24826313 ID=MsG0680031699.01.T01:cds;Parent=MsG0680031699.01.T01
Chr6 CDS 24826510 24826971 24826510 ID=MsG0680031699.01.T01:cds;Parent=MsG0680031699.01.T01
Chr6 CDS 24829759 24830049 24829759 ID=MsG0680031699.01.T01:cds;Parent=MsG0680031699.01.T01
Chr6 CDS 24831218 24831489 24831218 ID=MsG0680031699.01.T01:cds;Parent=MsG0680031699.01.T01
Chr6 CDS 24832059 24832125 24832059 ID=MsG0680031699.01.T01:cds;Parent=MsG0680031699.01.T01
Chr6 CDS 24832230 24832745 24832230 ID=MsG0680031699.01.T01:cds;Parent=MsG0680031699.01.T01
Chr6 three_prime_UTR 24832746 24832979 24832746 ID=MsG0680031699.01.T01:three_prime_utr;Parent=MsG0680031699.01.T01
Gene Sequence

>MsG0680031699.01.T01

ATGAGAACCAAAACCGTTGGTGGCAAACGCCGTTCGTTAATCAACCCTAATTCACCATTCGTTCTTTCAACACTGGAAACCGATGAGGAAGAAGATCCAAATCCAATTTACCGAAAATCAACTGTTTGGAATGAATGGGTTATCTTCAAGCAAGATAAAACGAAGAAAGCTTCGGACTTTAAGGGGAAATCGACGTATAATACGAATCCTAGTAGGAATAAGCCGTGTGTGTATTGCATTGGTCATGAAGATGAATGTAGTGAGGAGATTTTTAGGGTTCCGTTTGATGAACCGAATTGGAAGATTAGGGTTGTTGAGAGTCCGAATCCGGCGGTTTTGAGGAGTTTGGATGATGGGTTTGTGTTGGATGGTGGTGAGGTTTTGGATGGGTTTGGGATTCATGATGTTGTCATTGAGAGTCCTGTGCATTCGGAGCAGTTGTTGGATTTGACGCCGAAGGATGTTGGCGAGGTTTTTGTTGCTTTTAGTAATAGGATCAGAGAATTGGTTCATCTTGAGTCTATCAAATATGTTCAGGTGTTTAAAAACCATGGTGAAAAAGCTGGTGCAGCAATGAGTCATTCTCATAGTCAAATCCTGGGCTTGCCAATTGTTCCAAACAATGTTTCTGCCCGTCTTGGAAATATGAAGGATTTTTTTTATCAGACAGGGAAGTGCTGTATTTGTGACATTCAACTTGAGGATCTTTTGATTGATTCATCTTCCTACTTCTTTTCATTGGTTCCGTTTGCTGCTTCATTTCCTTTTGAGATATGGGTTGTTCCCCGGTATCACTCTGCACACTTCCATGAATTGGATGATGAAATGGCACTTGATCTTGGAGGTTTGATGAGAACCACTCTTAGAAAGATGTCTTTTCAATTGAACAATCCGCCATACAACTTTATGATTCACACTAGTCCATTGCGTGGTGATGGGTCAGAGCTGGCATACAGTCATTGGTTTATACAGATAATACCTCAGCTGATTCCGACAACTGGTTTTGAGCTTGGAACTGGGTCTCACATCAATCCTGTTTTGCCTGAGGATGCTGCAAAGATTCTAAGAGAAGTGATTGTTCCTGTGTTTGCACATGAAAGGCGCATGGTGGGATTTTTACCTCCAACTAAGATTGTGGATTATAGTGATGCATTCACCACCAAAGAGGTGTTTCCTACTCGAGAGTATCTGCTGAATTGGGCACGAGCCATTGGGAGAGAGCACGGGTTTACTGTTATCATTCAAAGATCAGACAATGGCGGATTGAAGAAGAGGATAGGAAGGAAAACAACTGTGATTTTGGGTTGCGAAAGAAGTGGAAAATATAGACAATACAAGGATGCATTAGCTCGCAAGACTGGAACAAAGAAATGTGGGTGTCCATTCCGACTGAGAGGAAGACCTGTTAGAAATGGTGATGGATGGAAAGTGAACGTAGTGTGTGGATTTCACAACCATGAAGTAATTGAAACTGCGATCGGGAGCACATATGCCGGTCGGCTAAGTGGCGAAGAGAAGTCTTTGGTCGATGATCTGACAAGAAGCAATTACAAACCGAAAGACATATTACAGACATTGAAAGAACGTAATGAAGAGAATCTCACTTCTATCAAGCAGATTTATAATTTGCGCCAACAGCTAAAACGTTCTAGATTAGAATTAGAAATGGAAAATTCGGCATAG

Protein sequence

>MsG0680031699.01.T01

MRTKTVGGKRRSLINPNSPFVLSTLETDEEEDPNPIYRKSTVWNEWVIFKQDKTKKASDFKGKSTYNTNPSRNKPCVYCIGHEDECSEEIFRVPFDEPNWKIRVVESPNPAVLRSLDDGFVLDGGEVLDGFGIHDVVIESPVHSEQLLDLTPKDVGEVFVAFSNRIRELVHLESIKYVQVFKNHGEKAGAAMSHSHSQILGLPIVPNNVSARLGNMKDFFYQTGKCCICDIQLEDLLIDSSSYFFSLVPFAASFPFEIWVVPRYHSAHFHELDDEMALDLGGLMRTTLRKMSFQLNNPPYNFMIHTSPLRGDGSELAYSHWFIQIIPQLIPTTGFELGTGSHINPVLPEDAAKILREVIVPVFAHERRMVGFLPPTKIVDYSDAFTTKEVFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQYKDALARKTGTKKCGCPFRLRGRPVRNGDGWKVNVVCGFHNHEVIETAIGSTYAGRLSGEEKSLVDDLTRSNYKPKDILQTLKERNEENLTSIKQIYNLRQQLKRSRLELEMENSA*