AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007441.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007441.01.T01 MTR_2g025490 95.327 214 4 2 1 214 1 208 8.72e-145 402
MsG0280007441.01.T01 MTR_3g054230 45.679 162 59 6 1 161 1 134 1.49e-30 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007441.01.T01 AT4G22320 51.464 239 82 10 1 210 1 234 4.23e-58 183
MsG0280007441.01.T01 AT4G22320 51.250 240 82 10 1 210 1 235 5.66e-58 183
MsG0280007441.01.T01 AT5G55210 43.704 135 61 5 1 131 1 124 1.40e-24 95.5

Find 67 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAGTTTGGATTTGAGTT+TGG 0.236449 2:-15507557 MsG0280007441.01.T01:CDS
CCAAACTTTCATTGAGATCT+TGG 0.239878 2:+15507569 None:intergenic
TCTCTAGAGAGAGAAATAAA+AGG 0.274793 2:-15513433 MsG0280007441.01.T01:five_prime_UTR
GCAATTGAATCAGCCTCTAT+TGG 0.282241 2:+15508808 None:intergenic
CATTACCGTTGGCGTTGTTC+TGG 0.285973 2:+15513053 None:intergenic
ATCCAAAGTCTCATTCTTGC+TGG 0.301781 2:+15508774 None:intergenic
ATTGGGACATCATTTATATC+AGG 0.312687 2:+15508745 None:intergenic
TTGTTCTGGCTTTGAGTAAT+AGG 0.314463 2:+15513067 None:intergenic
CCAAGATCTCAATGAAAGTT+TGG 0.320577 2:-15507569 MsG0280007441.01.T01:CDS
GAAAGTTTGGATTTGAGTTT+GGG 0.321986 2:-15507556 MsG0280007441.01.T01:CDS
ATTCGCGTTGTTGTTGTTGT+TGG 0.338349 2:+15513153 None:intergenic
TCACTGGACCGGTTAGAAAA+TGG 0.346625 2:-15513222 MsG0280007441.01.T01:CDS
TTAGAAAATGGAAGAAGAAA+TGG 0.362214 2:-15513210 MsG0280007441.01.T01:CDS
GGAAGGAGTTGGGGCCCGAC+TGG 0.365432 2:-15513281 MsG0280007441.01.T01:CDS
TTTACCTCGCTTTCTTCCAT+TGG 0.399400 2:+15508727 None:intergenic
GAAGGAGTTGGGGCCCGACT+GGG 0.403600 2:-15513280 MsG0280007441.01.T01:CDS
TAGTTAAGATGGAAGGAGTT+GGG 0.405924 2:-15513291 MsG0280007441.01.T01:exon
ATCTGTTTAGTTAGTTAAGA+TGG 0.406788 2:-15513302 MsG0280007441.01.T01:exon
AACCGTTGCTGGTCCGTAAC+GGG 0.407053 2:+15513246 None:intergenic
AAGGAGTTGGGGCCCGACTG+GGG 0.435265 2:-15513279 MsG0280007441.01.T01:CDS
TTACCTCGCTTTCTTCCATT+GGG 0.437105 2:+15508728 None:intergenic
GGTCCAGTGAAAACCGTTGC+TGG 0.440517 2:+15513235 None:intergenic
GGTCGAGGACCGCCCCAGTC+GGG 0.446534 2:+15513267 None:intergenic
TGCTGGTCCGTAACGGGTCG+AGG 0.449954 2:+15513252 None:intergenic
TAATGGAAATGGTAGTGTTA+AGG 0.450864 2:-15513035 MsG0280007441.01.T01:CDS
TAAGGATGCGGCGGTGGAGC+CGG 0.460006 2:-15513017 MsG0280007441.01.T01:CDS
TTAGTTAAGATGGAAGGAGT+TGG 0.465864 2:-15513292 MsG0280007441.01.T01:exon
GGACTTTATATTTCAGCCTC+AGG 0.466784 2:-15507611 MsG0280007441.01.T01:CDS
CTCTAGAGAGAGAAATAAAA+GGG 0.467546 2:-15513432 MsG0280007441.01.T01:five_prime_UTR
AACGCCAACGGTAATGGAAA+TGG 0.469248 2:-15513046 MsG0280007441.01.T01:CDS
CGCCGCGGTGGCTCTTCCAC+CGG 0.473021 2:+15512998 None:intergenic
AAAGTCTCATTCTTGCTGGT+TGG 0.473240 2:+15508778 None:intergenic
TAGAGGTGGATCGGAGTAAT+CGG 0.474960 2:-15513332 MsG0280007441.01.T01:five_prime_UTR
GGGCGGTCCTCGACCCGTTA+CGG 0.475450 2:-15513259 MsG0280007441.01.T01:CDS
GCGAATCAAAATCACGTTAA+CGG 0.479665 2:-15513136 MsG0280007441.01.T01:CDS
CAGAACAACGCCAACGGTAA+TGG 0.484308 2:-15513052 MsG0280007441.01.T01:CDS
TAGAAAATGGAAGAAGAAAT+GGG 0.486866 2:-15513209 MsG0280007441.01.T01:CDS
AACCAGCAAGAATGAGACTT+TGG 0.493904 2:-15508776 MsG0280007441.01.T01:CDS
AGAAGATGAGGTTACCGAAA+AGG 0.495946 2:-15508848 MsG0280007441.01.T01:CDS
GCGCAAGTTTAAATATGTTC+CGG 0.503111 2:-15512978 MsG0280007441.01.T01:intron
GGGTCGAGGACCGCCCCAGT+CGG 0.506478 2:+15513266 None:intergenic
TAGTGTTAAGGATGCGGCGG+TGG 0.519864 2:-15513023 MsG0280007441.01.T01:CDS
GGATGCGGCGGTGGAGCCGG+TGG 0.522408 2:-15513014 MsG0280007441.01.T01:CDS
GTTTAGTTAGTTAAGATGGA+AGG 0.523466 2:-15513298 MsG0280007441.01.T01:exon
TATCATTGTTAGAGGTGGAT+CGG 0.529797 2:-15513341 MsG0280007441.01.T01:five_prime_UTR
ACTACCATTTCCATTACCGT+TGG 0.537906 2:+15513042 None:intergenic
AGATGAATCTAATCCAATAG+AGG 0.542007 2:-15508821 MsG0280007441.01.T01:CDS
AAACCGTTGCTGGTCCGTAA+CGG 0.561604 2:+15513245 None:intergenic
AACGGTAGTAACGGTAATAA+CGG 0.562113 2:-15513118 MsG0280007441.01.T01:CDS
GACCCGTTACGGACCAGCAA+CGG 0.575760 2:-15513248 MsG0280007441.01.T01:CDS
TTGAGTTACTGACCATCTGT+AGG 0.578623 2:+15507484 None:intergenic
TATTTAAACTTGCGCCGCGG+TGG 0.581873 2:+15512986 None:intergenic
GAGTTGGGGCCCGACTGGGG+CGG 0.583534 2:-15513276 MsG0280007441.01.T01:CDS
AGTTAAGATGGAAGGAGTTG+GGG 0.584907 2:-15513290 MsG0280007441.01.T01:exon
TGATATAAATGATGTCCCAA+TGG 0.590965 2:-15508743 MsG0280007441.01.T01:CDS
AAATGGTAGTGTTAAGGATG+CGG 0.594445 2:-15513029 MsG0280007441.01.T01:CDS
AAAACTAATCAACCTACAGA+TGG 0.605067 2:-15507496 MsG0280007441.01.T01:CDS
GAATTCGATGAAGAAGATGA+AGG 0.610260 2:+15513175 None:intergenic
AATCACGTTAACGGTAGTAA+CGG 0.610526 2:-15513127 MsG0280007441.01.T01:CDS
AAACGAGGCTACAGAAGATG+AGG 0.611248 2:-15508860 MsG0280007441.01.T01:CDS
TGGTAGTGTTAAGGATGCGG+CGG 0.652841 2:-15513026 MsG0280007441.01.T01:CDS
GGTGGATCGGAGTAATCGGA+AGG 0.653485 2:-15513328 MsG0280007441.01.T01:five_prime_UTR
CAAAGCCAGAACAACGCCAA+CGG 0.656094 2:-15513058 MsG0280007441.01.T01:CDS
GATGTAGGTTGCTGTACTAG+AGG 0.677780 2:-15508890 MsG0280007441.01.T01:intron
TGTCCCAATGGAAGAAAGCG+AGG 0.691638 2:-15508731 MsG0280007441.01.T01:intron
AGCCGGTGGAAGAGCCACCG+CGG 0.703301 2:-15513000 MsG0280007441.01.T01:CDS
ACATATTTAAACTTGCGCCG+CGG 0.746093 2:+15512983 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTATTGAAAAATAATT+TGG + Chr2:15509242-15509261 None:intergenic 10.0%
!! CTAATAATGATTAAAAAAAT+TGG - Chr2:15508567-15508586 MsG0280007441.01.T01:intron 10.0%
!!! GTTTTTTAAAAGAAAAAAAT+TGG + Chr2:15507549-15507568 None:intergenic 10.0%
!!! TTCTTTATTTATCTTTTTAT+TGG - Chr2:15507995-15508014 MsG0280007441.01.T01:intron 10.0%
!! AAAGAAAAAAATTGGATATT+TGG + Chr2:15507541-15507560 None:intergenic 15.0%
!! AATTATTAAATGATTTATCG+TGG + Chr2:15511904-15511923 None:intergenic 15.0%
!! TACATAATAAAGGTAATAAA+AGG + Chr2:15513287-15513306 None:intergenic 15.0%
!! TCAAATATTGTAAAAGAAAA+TGG + Chr2:15512826-15512845 None:intergenic 15.0%
!! TTAAAAACAAAATCATTTGA+CGG + Chr2:15509678-15509697 None:intergenic 15.0%
!! TTTATTGGATTTGAATATTA+TGG - Chr2:15508010-15508029 MsG0280007441.01.T01:intron 15.0%
!!! AAAAATTTTATCATTGTTAG+AGG - Chr2:15507575-15507594 MsG0280007441.01.T01:CDS 15.0%
!!! AAATTTTAGAAAATTGAAAC+AGG - Chr2:15512994-15513013 MsG0280007441.01.T01:CDS 15.0%
!!! ATATGTTTTCTTAAACTAAA+TGG - Chr2:15512547-15512566 MsG0280007441.01.T01:intron 15.0%
!!! ATGATTTTGTTTTTAAACAA+TGG - Chr2:15509682-15509701 MsG0280007441.01.T01:intron 15.0%
!!! ATGATTTTTTGTTTAAGAAA+TGG - Chr2:15510068-15510087 MsG0280007441.01.T01:intron 15.0%
!!! TATTTTTTATTTCAAGTGTT+TGG - Chr2:15508642-15508661 MsG0280007441.01.T01:intron 15.0%
!!! TCTAACAATGATAAAATTTT+TGG + Chr2:15507576-15507595 None:intergenic 15.0%
!!! TTTATTTTAAATTGCTAACA+AGG + Chr2:15512971-15512990 None:intergenic 15.0%
!!! TTTCTTTTTAAAAGTTTGAA+TGG - Chr2:15512416-15512435 MsG0280007441.01.T01:intron 15.0%
!!! TTTGTTTTCTAAAAAATAGT+CGG - Chr2:15510979-15510998 MsG0280007441.01.T01:intron 15.0%
!!! TTTTTAATATATCTTTAGGA+TGG - Chr2:15509320-15509339 MsG0280007441.01.T01:intron 15.0%
!! ACGAAATAAAGTTAACTAAT+GGG - Chr2:15510165-15510184 MsG0280007441.01.T01:intron 20.0%
!! ATAATACATTAAGAAAGTTG+AGG + Chr2:15512683-15512702 None:intergenic 20.0%
!! CTATATTCTCTTATATTGAT+TGG + Chr2:15512786-15512805 None:intergenic 20.0%
!! CTATTAGTTATTAAAAAGAG+TGG - Chr2:15509841-15509860 MsG0280007441.01.T01:intron 20.0%
!! GATTAAAAAAATTGGTGAAA+AGG - Chr2:15508575-15508594 MsG0280007441.01.T01:intron 20.0%
!! GCTCAATAAAAAAACTAAAT+GGG - Chr2:15513079-15513098 MsG0280007441.01.T01:CDS 20.0%
!! TAAATATGATAAATGCAAGT+TGG - Chr2:15508982-15509001 MsG0280007441.01.T01:intron 20.0%
!! TACCTTTATTATGTATAATG+AGG - Chr2:15513292-15513311 MsG0280007441.01.T01:exon 20.0%
!! TACGAAATAAAGTTAACTAA+TGG - Chr2:15510164-15510183 MsG0280007441.01.T01:intron 20.0%
!! TATTAAAAAGAGTGGTAAAA+CGG - Chr2:15509849-15509868 MsG0280007441.01.T01:intron 20.0%
!! TCATATAACTTTACAATACT+AGG - Chr2:15511408-15511427 MsG0280007441.01.T01:intron 20.0%
!! TGCTCAATAAAAAAACTAAA+TGG - Chr2:15513078-15513097 MsG0280007441.01.T01:CDS 20.0%
!!! AAAACTACCACAATTTTTTA+TGG + Chr2:15508934-15508953 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+CGG - Chr2:15508240-15508259 MsG0280007441.01.T01:intron 20.0%
!!! AAACTACCACAATTTTTTAT+GGG + Chr2:15508933-15508952 None:intergenic 20.0%
!!! ACACTTCAATTATCTTTTAA+TGG - Chr2:15509733-15509752 MsG0280007441.01.T01:intron 20.0%
!!! ATTGGCAAACAATAATTTTT+TGG - Chr2:15510762-15510781 MsG0280007441.01.T01:intron 20.0%
!!! GAATTAGCATTGATATTTTA+TGG - Chr2:15508158-15508177 MsG0280007441.01.T01:intron 20.0%
!!! GTTAATTGTTTGCATTTTTA+TGG - Chr2:15508452-15508471 MsG0280007441.01.T01:intron 20.0%
!!! TAAAAGATAATTGAAGTGTT+AGG + Chr2:15509732-15509751 None:intergenic 20.0%
!!! TATAGGTACAAATTAGTTTT+TGG - Chr2:15509977-15509996 MsG0280007441.01.T01:intron 20.0%
!!! TTACATTCTGGAAAAATTTA+TGG + Chr2:15512270-15512289 None:intergenic 20.0%
!!! TTACTGACAAAAGTTTTTTT+TGG + Chr2:15512599-15512618 None:intergenic 20.0%
!!! TTTTATAGGATGAATTCATA+GGG - Chr2:15508116-15508135 MsG0280007441.01.T01:intron 20.0%
!!! TTTTTAAAAGTTTGAATGGT+GGG - Chr2:15512420-15512439 MsG0280007441.01.T01:intron 20.0%
! AATAACACTTATGTTGGAAA+TGG - Chr2:15511295-15511314 MsG0280007441.01.T01:intron 25.0%
! ACAGAAACACGATAAATAAA+TGG + Chr2:15512746-15512765 None:intergenic 25.0%
! ACAGAATATTCCATTATGTT+CGG + Chr2:15511070-15511089 None:intergenic 25.0%
! AGAATTCCCATAAAAAATTG+TGG - Chr2:15508924-15508943 MsG0280007441.01.T01:intron 25.0%
! ATCTGTTTAGTTAGTTAAGA+TGG - Chr2:15507622-15507641 MsG0280007441.01.T01:intron 25.0%
! CAGAAACACGATAAATAAAT+GGG + Chr2:15512745-15512764 None:intergenic 25.0%
! CTTTACACGTAAATTAGAAT+GGG + Chr2:15511165-15511184 None:intergenic 25.0%
! GATTCAAAAATTGACAACTA+TGG + Chr2:15511390-15511409 None:intergenic 25.0%
! GTCCTCATTATACATAATAA+AGG + Chr2:15513297-15513316 None:intergenic 25.0%
! TAAACATGAAGTAAATGAAG+AGG + Chr2:15512233-15512252 None:intergenic 25.0%
! TAGAAAATGGAAGAAGAAAT+GGG - Chr2:15507715-15507734 MsG0280007441.01.T01:intron 25.0%
! TAGATAAAACACATTCTATG+AGG + Chr2:15509824-15509843 None:intergenic 25.0%
! TCTGGAAAAATTTATGGTAT+TGG + Chr2:15512264-15512283 None:intergenic 25.0%
! TGTTTAATACATCTTTAGCA+TGG - Chr2:15510572-15510591 MsG0280007441.01.T01:intron 25.0%
! TTAGAAAATGGAAGAAGAAA+TGG - Chr2:15507714-15507733 MsG0280007441.01.T01:intron 25.0%
! TTGATATTGCTAATCCTTTA+AGG + Chr2:15510716-15510735 None:intergenic 25.0%
! TTTCCAAATGACAAAAGTTT+AGG - Chr2:15508693-15508712 MsG0280007441.01.T01:intron 25.0%
! TTTGATAAGTGTGTTAAACA+AGG + Chr2:15511250-15511269 None:intergenic 25.0%
!! AAGATACTAAAATGTCCTTT+TGG - Chr2:15508666-15508685 MsG0280007441.01.T01:intron 25.0%
!! AATGTTTTCCAAAAGTAATC+AGG - Chr2:15513018-15513037 MsG0280007441.01.T01:CDS 25.0%
!! AATTCAAGTTTAAACTCTGA+AGG + Chr2:15508291-15508310 None:intergenic 25.0%
!! AATTGATAATTAACTGACCA+AGG - Chr2:15508475-15508494 MsG0280007441.01.T01:intron 25.0%
!! AATTTTATCATTGTTAGAGG+TGG - Chr2:15507578-15507597 MsG0280007441.01.T01:CDS 25.0%
!! ATAATTGAAGTGTTAGGTTT+AGG + Chr2:15509726-15509745 None:intergenic 25.0%
!! GTTTTATAGGATGAATTCAT+AGG - Chr2:15508115-15508134 MsG0280007441.01.T01:intron 25.0%
!! TTTAGGAACAAATTCGTTTT+TGG - Chr2:15508710-15508729 MsG0280007441.01.T01:intron 25.0%
!! TTTTAAATGTGTCCAAGAAA+TGG + Chr2:15512479-15512498 None:intergenic 25.0%
!!! AGAAGTTTCTATCTTTTTCA+TGG - Chr2:15512380-15512399 MsG0280007441.01.T01:intron 25.0%
!!! AGACTTTTAGAACATCAATT+TGG + Chr2:15510820-15510839 None:intergenic 25.0%
!!! AGTTTAGTTTAGGGTTTTAT+AGG - Chr2:15508102-15508121 MsG0280007441.01.T01:intron 25.0%
!!! ATATGTTTTTTCTTGGTAGA+TGG + Chr2:15511218-15511237 None:intergenic 25.0%
!!! ATATTCTGTTTTGTTCTCTT+TGG - Chr2:15511081-15511100 MsG0280007441.01.T01:intron 25.0%
!!! CTTTTTAAAAGTTTGAATGG+TGG - Chr2:15512419-15512438 MsG0280007441.01.T01:intron 25.0%
!!! GAATTTTTTATCGAAGTGTT+CGG - Chr2:15509909-15509928 MsG0280007441.01.T01:intron 25.0%
!!! GGTTTTATGAGTTTAGTTTA+GGG - Chr2:15508093-15508112 MsG0280007441.01.T01:intron 25.0%
!!! TTAGTTTTTGGTTAACTTTG+TGG - Chr2:15509989-15510008 MsG0280007441.01.T01:intron 25.0%
!!! TTGGCTATTTTAATGTTAAG+TGG - Chr2:15510781-15510800 MsG0280007441.01.T01:intron 25.0%
!!! TTGTTTTTGTAGTTAGAATC+AGG - Chr2:15512341-15512360 MsG0280007441.01.T01:intron 25.0%
AAAACTAATCAACCTACAGA+TGG - Chr2:15513428-15513447 MsG0280007441.01.T01:five_prime_UTR 30.0%
AAAGGAAGATAAGTAGTGTA+AGG - Chr2:15508593-15508612 MsG0280007441.01.T01:intron 30.0%
AAATCATCTACAATAAACGC+AGG - Chr2:15510235-15510254 MsG0280007441.01.T01:intron 30.0%
AACAGAAACACAAACATGTT+TGG + Chr2:15508435-15508454 None:intergenic 30.0%
AATACCATGTACAACAATCT+TGG + Chr2:15509776-15509795 None:intergenic 30.0%
AATCAACTTCATGACATTTG+AGG + Chr2:15509462-15509481 None:intergenic 30.0%
ACAAAATTACTGAAGAGTGA+AGG + Chr2:15511808-15511827 None:intergenic 30.0%
ACAAAGTCTAATGGAAAAAG+AGG - Chr2:15510443-15510462 MsG0280007441.01.T01:intron 30.0%
ACACTCTTATTCTCATTCTT+TGG + Chr2:15510350-15510369 None:intergenic 30.0%
ACATTTGAGGACTAAATTGA+GGG + Chr2:15509449-15509468 None:intergenic 30.0%
ACTGATAGGATTTCAAATTG+AGG - Chr2:15509636-15509655 MsG0280007441.01.T01:intron 30.0%
AGAGTGATATGAATGTAAAG+TGG + Chr2:15508403-15508422 None:intergenic 30.0%
AGATGAATCTAATCCAATAG+AGG - Chr2:15512103-15512122 MsG0280007441.01.T01:intron 30.0%
AGGATTTCAAATTGAGGTAT+TGG - Chr2:15509642-15509661 MsG0280007441.01.T01:intron 30.0%
AGGGTTTACAGTTAATTGTA+CGG + Chr2:15509430-15509449 None:intergenic 30.0%
AGTTTGATGAAACTAGAATC+GGG - Chr2:15508769-15508788 MsG0280007441.01.T01:CDS 30.0%
ATAACCATATACCAACACAA+CGG + Chr2:15510551-15510570 None:intergenic 30.0%
ATAAGTGTGTTAAACAAGGA+TGG + Chr2:15511246-15511265 None:intergenic 30.0%
ATACATTAAGAAAGTTGAGG+AGG + Chr2:15512680-15512699 None:intergenic 30.0%
ATATACCATGTTCAGTAGTA+TGG - Chr2:15511967-15511986 MsG0280007441.01.T01:intron 30.0%
ATGGAAAAAGAGGATCTATT+TGG - Chr2:15509198-15509217 MsG0280007441.01.T01:intron 30.0%
ATGGGAACTCATACAAAAAA+TGG - Chr2:15510183-15510202 MsG0280007441.01.T01:intron 30.0%
ATTCTATGAGGTAAATCTAC+GGG + Chr2:15509812-15509831 None:intergenic 30.0%
ATTGGGACATCATTTATATC+AGG + Chr2:15512182-15512201 None:intergenic 30.0%
ATTGGTAAACAAGAAGTTCT+GGG - Chr2:15509479-15509498 MsG0280007441.01.T01:intron 30.0%
CAAAAAAAGTTTACCCAAGA+TGG + Chr2:15510606-15510625 None:intergenic 30.0%
CAGAGTTTAAACTTGAATTC+AGG - Chr2:15508292-15508311 MsG0280007441.01.T01:intron 30.0%
CAGTTTGATGAAACTAGAAT+CGG - Chr2:15508768-15508787 MsG0280007441.01.T01:CDS 30.0%
CATTCTATGAGGTAAATCTA+CGG + Chr2:15509813-15509832 None:intergenic 30.0%
CTGTTGTTCATCGTATTTAT+TGG - Chr2:15508498-15508517 MsG0280007441.01.T01:intron 30.0%
GAAAATGGTGTGAAAAATGT+TGG + Chr2:15512811-15512830 None:intergenic 30.0%
GCATTGTAATTGAACATTAC+CGG + Chr2:15507968-15507987 None:intergenic 30.0%
GCTTTACACGTAAATTAGAA+TGG + Chr2:15511166-15511185 None:intergenic 30.0%
GTAAAAATCACGTTTAGACT+CGG + Chr2:15508329-15508348 None:intergenic 30.0%
GTATTATGTCTGATGCATTA+GGG - Chr2:15512696-15512715 MsG0280007441.01.T01:intron 30.0%
GTGAACTCATCTATAAACAA+GGG - Chr2:15511641-15511660 MsG0280007441.01.T01:intron 30.0%
GTTTAGTTAGTTAAGATGGA+AGG - Chr2:15507626-15507645 MsG0280007441.01.T01:intron 30.0%
TAAGTGTGTTAAACAAGGAT+GGG + Chr2:15511245-15511264 None:intergenic 30.0%
TACATAAAAAAGACCGTTGA+AGG + Chr2:15511330-15511349 None:intergenic 30.0%
TATACCATGTTCAGTAGTAT+GGG - Chr2:15511968-15511987 MsG0280007441.01.T01:intron 30.0%
TATCTTTACATAGTGGTTTG+TGG - Chr2:15510414-15510433 MsG0280007441.01.T01:intron 30.0%
TATTATGTCTGATGCATTAG+GGG - Chr2:15512697-15512716 MsG0280007441.01.T01:intron 30.0%
TCAAATGTCATGAATCTGAT+TGG - Chr2:15510744-15510763 MsG0280007441.01.T01:intron 30.0%
TGAAACAATAACAGAGGAAA+AGG + Chr2:15513055-15513074 None:intergenic 30.0%
TGAACTCATCTATAAACAAG+GGG - Chr2:15511642-15511661 MsG0280007441.01.T01:intron 30.0%
TGATATAAATGATGTCCCAA+TGG - Chr2:15512181-15512200 MsG0280007441.01.T01:intron 30.0%
TGATCAACAAATGTGTTTGA+GGG + Chr2:15511354-15511373 None:intergenic 30.0%
TGGATGCTGATATATATGTT+TGG - Chr2:15508178-15508197 MsG0280007441.01.T01:intron 30.0%
TGGGAAAATAACACTTATGT+TGG - Chr2:15511289-15511308 MsG0280007441.01.T01:intron 30.0%
TGGGAAATGAAGTTTAAAAG+TGG + Chr2:15511146-15511165 None:intergenic 30.0%
TGTATTATGTCTGATGCATT+AGG - Chr2:15512695-15512714 MsG0280007441.01.T01:intron 30.0%
TGTGAACTCATCTATAAACA+AGG - Chr2:15511640-15511659 MsG0280007441.01.T01:intron 30.0%
TTAAATTGCTAACAAGGAGA+TGG + Chr2:15512965-15512984 None:intergenic 30.0%
TTTGACAACTGTTTGAAGAT+TGG - Chr2:15512638-15512657 MsG0280007441.01.T01:intron 30.0%
! AAAATTGTGGTAGTTTTCGT+AGG - Chr2:15508937-15508956 MsG0280007441.01.T01:intron 30.0%
! AACTATGTCCTGATTACTTT+TGG + Chr2:15513029-15513048 None:intergenic 30.0%
! AAGAATGAGAATAAGAGTGT+TGG - Chr2:15510350-15510369 MsG0280007441.01.T01:intron 30.0%
! AAGGATTCTTTTTGTGGAAA+TGG - Chr2:15509126-15509145 MsG0280007441.01.T01:intron 30.0%
! AGATTCATCTTCAACCTTTT+CGG + Chr2:15512093-15512112 None:intergenic 30.0%
! ATACCAAAATGCCTTTTTGT+CGG - Chr2:15509936-15509955 MsG0280007441.01.T01:intron 30.0%
! ATCCTTTAAGGACTAAATTG+AGG + Chr2:15510704-15510723 None:intergenic 30.0%
! CTCTAGAGAGAGAAATAAAA+GGG - Chr2:15507492-15507511 MsG0280007441.01.T01:CDS 30.0%
! GAAAGTTTGGATTTGAGTTT+GGG - Chr2:15513368-15513387 MsG0280007441.01.T01:five_prime_UTR 30.0%
! GTCGGTTCTATTGTTATATT+AGG - Chr2:15509373-15509392 MsG0280007441.01.T01:intron 30.0%
! GTTATTGTCTTTATTTCGTG+TGG - Chr2:15510511-15510530 MsG0280007441.01.T01:intron 30.0%
! GTTCCTAAACTTTTGTCATT+TGG + Chr2:15508699-15508718 None:intergenic 30.0%
! TAATGGAAATGGTAGTGTTA+AGG - Chr2:15507889-15507908 MsG0280007441.01.T01:intron 30.0%
! TAGACTTTGGACAAGTTTTA+TGG - Chr2:15513115-15513134 MsG0280007441.01.T01:CDS 30.0%
! TCAAATGTCATGAAGTTGAT+TGG - Chr2:15509461-15509480 MsG0280007441.01.T01:intron 30.0%
! TCCCTTTTATCAATCTAAGT+CGG + Chr2:15512320-15512339 None:intergenic 30.0%
! TCCTTTAAGGACTAAATTGA+GGG + Chr2:15510703-15510722 None:intergenic 30.0%
! TCTCTAGAGAGAGAAATAAA+AGG - Chr2:15507491-15507510 MsG0280007441.01.T01:CDS 30.0%
! TGAAAGTTTGGATTTGAGTT+TGG - Chr2:15513367-15513386 MsG0280007441.01.T01:five_prime_UTR 30.0%
! TTCTTCTTCCATTTTCTAAC+CGG + Chr2:15507713-15507732 None:intergenic 30.0%
! TTCTTTTTGTGGAAATGGAA+AGG - Chr2:15509131-15509150 MsG0280007441.01.T01:intron 30.0%
!! CTCATCTTCTTCTTTTTAAG+TGG - Chr2:15507831-15507850 MsG0280007441.01.T01:intron 30.0%
!! GGGTTTTATGAGTTTAGTTT+AGG - Chr2:15508092-15508111 MsG0280007441.01.T01:intron 30.0%
!! GTTTTGATGAAACTAGAATC+AGG - Chr2:15510037-15510056 MsG0280007441.01.T01:intron 30.0%
!! TTGATGTTCTAAAAGTCTTG+AGG - Chr2:15510822-15510841 MsG0280007441.01.T01:intron 30.0%
!!! AAGGATTATTTTGGTGGAAA+TGG - Chr2:15510381-15510400 MsG0280007441.01.T01:intron 30.0%
!!! ACATAAGTGTTATTTTCCCA+AGG + Chr2:15511289-15511308 None:intergenic 30.0%
!!! CATAAGTGTTATTTTCCCAA+GGG + Chr2:15511288-15511307 None:intergenic 30.0%
!!! GGGACATATATGTTTTTTCT+TGG + Chr2:15511225-15511244 None:intergenic 30.0%
!!! TACGTTTTGATTCCACTAAA+TGG + Chr2:15511123-15511142 None:intergenic 30.0%
!!! TGTTATTTTCTTTGTTCGTG+TGG - Chr2:15509260-15509279 MsG0280007441.01.T01:intron 30.0%
!!! TTATTTTGGTGGAAATGGAA+AGG - Chr2:15510386-15510405 MsG0280007441.01.T01:intron 30.0%
!!! TTCGTTTTTGGTTAACTTTG+TGG - Chr2:15508722-15508741 MsG0280007441.01.T01:intron 30.0%
AAAAGTCTTGAGGATCAGAA+TGG - Chr2:15510832-15510851 MsG0280007441.01.T01:intron 35.0%
AAAATCTCGAGGATCAGAAT+GGG - Chr2:15509539-15509558 MsG0280007441.01.T01:intron 35.0%
AAAGTCTTGAGGATCAGAAT+GGG - Chr2:15510833-15510852 MsG0280007441.01.T01:intron 35.0%
AACGGTAGTAACGGTAATAA+CGG - Chr2:15507806-15507825 MsG0280007441.01.T01:intron 35.0%
AACTCAAAAAGTTGCTTCTG+TGG - Chr2:15511446-15511465 MsG0280007441.01.T01:intron 35.0%
AATCACGTTAACGGTAGTAA+CGG - Chr2:15507797-15507816 MsG0280007441.01.T01:intron 35.0%
AATGTACCGAGATGGAAATA+TGG - Chr2:15508841-15508860 MsG0280007441.01.T01:CDS 35.0%
AATTACTGAAGAGTGAAGGA+TGG + Chr2:15511804-15511823 None:intergenic 35.0%
ACAACTGTGAGGTTAATGAT+TGG + Chr2:15511585-15511604 None:intergenic 35.0%
ACAACTGTTTGAAGATTGGA+GGG - Chr2:15512642-15512661 MsG0280007441.01.T01:intron 35.0%
ACCCTCAATTTAGTCCTTAA+AGG - Chr2:15510699-15510718 MsG0280007441.01.T01:intron 35.0%
ATAAATGCAACAGGTCTACA+AGG - Chr2:15511721-15511740 MsG0280007441.01.T01:intron 35.0%
ATAACCATATACTGACACGA+TGG + Chr2:15509300-15509319 None:intergenic 35.0%
ATACCATGTTCAGTAGTATG+GGG - Chr2:15511969-15511988 MsG0280007441.01.T01:intron 35.0%
ATCAGAGACCAAATAGATCA+CGG + Chr2:15511834-15511853 None:intergenic 35.0%
ATGGAAATATGGATGCCTTA+CGG - Chr2:15508852-15508871 MsG0280007441.01.T01:CDS 35.0%
CAATTGTGATAGAGAGAAGA+TGG + Chr2:15512925-15512944 None:intergenic 35.0%
CCAAACTTTCATTGAGATCT+TGG + Chr2:15513358-15513377 None:intergenic 35.0%
CCAAGATCTCAATGAAAGTT+TGG - Chr2:15513355-15513374 MsG0280007441.01.T01:five_prime_UTR 35.0%
CTAACTAACTCAAATGCATC+AGG + Chr2:15509587-15509606 None:intergenic 35.0%
CTCTTCAGTAATCCATTTAG+TGG - Chr2:15511108-15511127 MsG0280007441.01.T01:intron 35.0%
CTGATCAACAAATGTGTTTG+AGG + Chr2:15511355-15511374 None:intergenic 35.0%
GAATGAGAATCCAACAGTAT+TGG - Chr2:15509095-15509114 MsG0280007441.01.T01:intron 35.0%
GAATTCGATGAAGAAGATGA+AGG + Chr2:15507752-15507771 None:intergenic 35.0%
GACATTTGAGGACTAAATTG+AGG + Chr2:15509450-15509469 None:intergenic 35.0%
GATCAACAAATGTGTTTGAG+GGG + Chr2:15511353-15511372 None:intergenic 35.0%
GATTGGTAAACAAGAAGTTC+TGG - Chr2:15509478-15509497 MsG0280007441.01.T01:intron 35.0%
GCGAATCAAAATCACGTTAA+CGG - Chr2:15507788-15507807 MsG0280007441.01.T01:intron 35.0%
GCGCAAGTTTAAATATGTTC+CGG - Chr2:15507946-15507965 MsG0280007441.01.T01:intron 35.0%
GGAACTCATACAAAAAATGG+CGG - Chr2:15510186-15510205 MsG0280007441.01.T01:intron 35.0%
GGAAGGATATCTTTACATAG+TGG - Chr2:15510407-15510426 MsG0280007441.01.T01:intron 35.0%
GGATAAAGCTCATCAAAGTT+GGG + Chr2:15511755-15511774 None:intergenic 35.0%
GTCTGTTCTGTTGTTATATC+AGG - Chr2:15510625-15510644 MsG0280007441.01.T01:intron 35.0%
TAGTTAAGATGGAAGGAGTT+GGG - Chr2:15507633-15507652 MsG0280007441.01.T01:intron 35.0%
TATACCAAGACCGAACATAA+TGG - Chr2:15511057-15511076 MsG0280007441.01.T01:intron 35.0%
TATCATTGTTAGAGGTGGAT+CGG - Chr2:15507583-15507602 MsG0280007441.01.T01:CDS 35.0%
TATCTTTACACTGTGGTTTG+TGG - Chr2:15509159-15509178 MsG0280007441.01.T01:intron 35.0%
TATTCCATTATGTTCGGTCT+TGG + Chr2:15511064-15511083 None:intergenic 35.0%
TCAGAGTCTAATGGAAAAAG+AGG - Chr2:15509188-15509207 MsG0280007441.01.T01:intron 35.0%
TCTAACAAACACAAGTGCAT+CGG + Chr2:15510882-15510901 None:intergenic 35.0%
TGAGTACAATACAATGACAG+TGG - Chr2:15511503-15511522 MsG0280007441.01.T01:intron 35.0%
TGGATAAAGCTCATCAAAGT+TGG + Chr2:15511756-15511775 None:intergenic 35.0%
TGGCATCTATATTTCCATCT+CGG + Chr2:15510116-15510135 None:intergenic 35.0%
TGGTTAACTTTGTGGAACTA+GGG - Chr2:15508730-15508749 MsG0280007441.01.T01:intron 35.0%
TGGTTGTAGACAAAGTCTAA+TGG - Chr2:15510434-15510453 MsG0280007441.01.T01:intron 35.0%
TTAGTTAAGATGGAAGGAGT+TGG - Chr2:15507632-15507651 MsG0280007441.01.T01:intron 35.0%
TTGATGTTCTCAAAATCTCG+AGG - Chr2:15509528-15509547 MsG0280007441.01.T01:intron 35.0%
TTGGTTAACTTTGTGGAACT+AGG - Chr2:15508729-15508748 MsG0280007441.01.T01:intron 35.0%
TTTCCATTAGACTCTGACTA+TGG + Chr2:15509185-15509204 None:intergenic 35.0%
TTTGTACTCCGTGATCTATT+TGG - Chr2:15511823-15511842 MsG0280007441.01.T01:intron 35.0%
! AAATGGTAGTGTTAAGGATG+CGG - Chr2:15507895-15507914 MsG0280007441.01.T01:intron 35.0%
! AATGTAAAGTGGCTTGTGTT+TGG + Chr2:15508392-15508411 None:intergenic 35.0%
! AGTTTTCGTAGGATTGGATT+TGG - Chr2:15508948-15508967 MsG0280007441.01.T01:intron 35.0%
! GCAAGTTGAAACAATAACAG+AGG + Chr2:15513061-15513080 None:intergenic 35.0%
! GCCGACTTAGATTGATAAAA+GGG - Chr2:15512316-15512335 MsG0280007441.01.T01:intron 35.0%
! GTTTTTGTGAGGATAGGATT+TGG - Chr2:15510211-15510230 MsG0280007441.01.T01:intron 35.0%
! TATATGTTTGGTTCCACGTT+TGG - Chr2:15508190-15508209 MsG0280007441.01.T01:intron 35.0%
! TTTGCGAATGACAGAAGTAT+AGG - Chr2:15509960-15509979 MsG0280007441.01.T01:intron 35.0%
!! AAATTGAGGTATTGGCATGA+TGG - Chr2:15509650-15509669 MsG0280007441.01.T01:intron 35.0%
!! AATGAGAATAAGAGTGTTGG+AGG - Chr2:15510353-15510372 MsG0280007441.01.T01:intron 35.0%
!! ATGAGAATAAGAGTGTTGGA+GGG - Chr2:15510354-15510373 MsG0280007441.01.T01:intron 35.0%
!! ATGTTGCTTTCACCATTTCT+TGG - Chr2:15512464-15512483 MsG0280007441.01.T01:intron 35.0%
!! CGTTTTGATGCTGATAATCT+GGG - Chr2:15511927-15511946 MsG0280007441.01.T01:intron 35.0%
!! TCGTTTTGATGCTGATAATC+TGG - Chr2:15511926-15511945 MsG0280007441.01.T01:intron 35.0%
!! TGCCGACTTAGATTGATAAA+AGG - Chr2:15512315-15512334 MsG0280007441.01.T01:intron 35.0%
!! TGGTACTACTTGCTATAAGT+TGG - Chr2:15510009-15510028 MsG0280007441.01.T01:intron 35.0%
!! TTGTTCTGGCTTTGAGTAAT+AGG + Chr2:15507860-15507879 None:intergenic 35.0%
!!! CTGGGAAAAGCTTTTTTTGT+CGG - Chr2:15509355-15509374 MsG0280007441.01.T01:intron 35.0%
!!! GTTTTTTCTTGGTAGATGGA+AGG + Chr2:15511214-15511233 None:intergenic 35.0%
!!! TCGTCTGTCATTTTAGACTT+TGG - Chr2:15513102-15513121 MsG0280007441.01.T01:CDS 35.0%
AAAGTCTCATTCTTGCTGGT+TGG + Chr2:15512149-15512168 None:intergenic 40.0%
AAATCCTATCAGAGATGCAG+AGG + Chr2:15510923-15510942 None:intergenic 40.0%
AAATCCTATCAGTGATGCAG+CGG + Chr2:15509629-15509648 None:intergenic 40.0%
AAATCTCGAGGATCAGAATG+GGG - Chr2:15509540-15509559 MsG0280007441.01.T01:intron 40.0%
AACCAGCAAGAATGAGACTT+TGG - Chr2:15512148-15512167 MsG0280007441.01.T01:intron 40.0%
AAGGCTGCAATAAATGCAAC+AGG - Chr2:15511712-15511731 MsG0280007441.01.T01:intron 40.0%
AATACGATGAACAACAGCCT+TGG + Chr2:15508495-15508514 None:intergenic 40.0%
AATCCCCATACTACTGAACA+TGG + Chr2:15511975-15511994 None:intergenic 40.0%
ACATATTTAAACTTGCGCCG+CGG + Chr2:15507944-15507963 None:intergenic 40.0%
ACTACCATTTCCATTACCGT+TGG + Chr2:15507885-15507904 None:intergenic 40.0%
ACTCATCTATAAACAAGGGG+CGG - Chr2:15511645-15511664 MsG0280007441.01.T01:intron 40.0%
ACTGTTGGATTCTCATTCTG+TGG + Chr2:15509093-15509112 None:intergenic 40.0%
AGAAGATGAGGTTACCGAAA+AGG - Chr2:15512076-15512095 MsG0280007441.01.T01:intron 40.0%
AGAGCAGTAGCTGAATGATA+TGG - Chr2:15511547-15511566 MsG0280007441.01.T01:intron 40.0%
AGGCATCCATATTTCCATCT+CGG + Chr2:15508850-15508869 None:intergenic 40.0%
AGTAAATGAAGAGGCAAGCA+AGG + Chr2:15512224-15512243 None:intergenic 40.0%
AGTTAAGATGGAAGGAGTTG+GGG - Chr2:15507634-15507653 MsG0280007441.01.T01:intron 40.0%
ATCATTCAGCTACTGCTCTT+GGG + Chr2:15511546-15511565 None:intergenic 40.0%
ATCCAAAGTCTCATTCTTGC+TGG + Chr2:15512153-15512172 None:intergenic 40.0%
ATGGAAATATAGATGCCACG+TGG - Chr2:15510118-15510137 MsG0280007441.01.T01:intron 40.0%
ATGTTAAGTGGCAGTAATCG+AGG - Chr2:15510793-15510812 MsG0280007441.01.T01:intron 40.0%
ATGTTCAGTAGTATGGGGAT+TGG - Chr2:15511974-15511993 MsG0280007441.01.T01:intron 40.0%
CAAAATCTCGAGGATCAGAA+TGG - Chr2:15509538-15509557 MsG0280007441.01.T01:intron 40.0%
CTAACAAACACAAGTGCATC+GGG + Chr2:15510881-15510900 None:intergenic 40.0%
CTGACCAAGATTGTTGTACA+TGG - Chr2:15509769-15509788 MsG0280007441.01.T01:intron 40.0%
CTGATCTATTCTGTTATGCC+TGG - Chr2:15511849-15511868 MsG0280007441.01.T01:intron 40.0%
GACAACTGTTTGAAGATTGG+AGG - Chr2:15512641-15512660 MsG0280007441.01.T01:intron 40.0%
GAGCAGTAGCTGAATGATAT+GGG - Chr2:15511548-15511567 MsG0280007441.01.T01:intron 40.0%
GAGCTGCAGTTATTACATTC+TGG + Chr2:15512282-15512301 None:intergenic 40.0%
GCAATTGAATCAGCCTCTAT+TGG + Chr2:15512119-15512138 None:intergenic 40.0%
GCTGTGAACTTCAATTGAGT+TGG + Chr2:15513235-15513254 None:intergenic 40.0%
GGACTTTATATTTCAGCCTC+AGG - Chr2:15513313-15513332 MsG0280007441.01.T01:five_prime_UTR 40.0%
GTAAATGAAGAGGCAAGCAA+GGG + Chr2:15512223-15512242 None:intergenic 40.0%
TACTGATCTATCCGTTGTGT+TGG - Chr2:15510537-15510556 MsG0280007441.01.T01:intron 40.0%
TATCATTCAGCTACTGCTCT+TGG + Chr2:15511547-15511566 None:intergenic 40.0%
TCATTTGGAAAGCTGCCAAA+AGG + Chr2:15508684-15508703 None:intergenic 40.0%
TCGTTTGATTCATGTAGTCG+AGG - Chr2:15508035-15508054 MsG0280007441.01.T01:intron 40.0%
TGAGATGCTAGATCCATCTA+TGG + Chr2:15511619-15511638 None:intergenic 40.0%
TGTGATAGAGAGAAGATGGA+AGG + Chr2:15512921-15512940 None:intergenic 40.0%
TGTTCAGTAGTATGGGGATT+GGG - Chr2:15511975-15511994 MsG0280007441.01.T01:intron 40.0%
TTACCTCGCTTTCTTCCATT+GGG + Chr2:15512199-15512218 None:intergenic 40.0%
TTTACCTCGCTTTCTTCCAT+TGG + Chr2:15512200-15512219 None:intergenic 40.0%
TTTGATGCTGATAATCTGGG+TGG - Chr2:15511930-15511949 MsG0280007441.01.T01:intron 40.0%
TTTGATTCATGTAGTCGAGG+TGG - Chr2:15508038-15508057 MsG0280007441.01.T01:intron 40.0%
TTTGGTGGAAATGGAAAGGA+AGG - Chr2:15510390-15510409 MsG0280007441.01.T01:intron 40.0%
! AAATGGCGGTAGTTTTTGTG+AGG - Chr2:15510200-15510219 MsG0280007441.01.T01:intron 40.0%
! AAGACGTGGTTGTTGTTGTT+CGG - Chr2:15508071-15508090 MsG0280007441.01.T01:intron 40.0%
! AATCTAAGTCGGCATTGAGT+TGG + Chr2:15512309-15512328 None:intergenic 40.0%
! ACATCAATTTGTTCCCTGAG+AGG + Chr2:15509515-15509534 None:intergenic 40.0%
! ACTACCTGATTTTTGTCCTG+AGG + Chr2:15513332-15513351 None:intergenic 40.0%
! ATTCGCGTTGTTGTTGTTGT+TGG + Chr2:15507774-15507793 None:intergenic 40.0%
! CTATCCGTTGTGTTGGTATA+TGG - Chr2:15510544-15510563 MsG0280007441.01.T01:intron 40.0%
! GAGAATCCAACAGTATTGGA+GGG - Chr2:15509099-15509118 MsG0280007441.01.T01:intron 40.0%
! GAGGGAGACAAGGATTATTT+TGG - Chr2:15510372-15510391 MsG0280007441.01.T01:intron 40.0%
! GGAAGCATATCTTTACACTG+TGG - Chr2:15509152-15509171 MsG0280007441.01.T01:intron 40.0%
! GGAGACAAGGATTCTTTTTG+TGG - Chr2:15509120-15509139 MsG0280007441.01.T01:intron 40.0%
! GTGAGTTGAACGATAAACTG+TGG + Chr2:15508353-15508372 None:intergenic 40.0%
! TCTGGACTATCTGATGATGT+AGG - Chr2:15512019-15512038 MsG0280007441.01.T01:intron 40.0%
! TGAGAATCCAACAGTATTGG+AGG - Chr2:15509098-15509117 MsG0280007441.01.T01:intron 40.0%
! TGTGGTAGTTTTCGTAGGAT+TGG - Chr2:15508942-15508961 MsG0280007441.01.T01:intron 40.0%
!! ACTTCAATTGAGTTGGTCAC+AGG + Chr2:15513228-15513247 None:intergenic 40.0%
!! AGGGTTTTAGTGTCTGAGAA+TGG - Chr2:15508135-15508154 MsG0280007441.01.T01:intron 40.0%
!! GGGTTTTAGTGTCTGAGAAT+GGG - Chr2:15508136-15508155 MsG0280007441.01.T01:intron 40.0%
!!! AAGCCGACAAAAAGGCATTT+TGG + Chr2:15509942-15509961 None:intergenic 40.0%
!!! GGAGACAAGGATTATTTTGG+TGG - Chr2:15510375-15510394 MsG0280007441.01.T01:intron 40.0%
!!! TTACCTTTTTCGACAGTGCT+CGG - Chr2:15511032-15511051 MsG0280007441.01.T01:intron 40.0%
AAACGAGGCTACAGAAGATG+AGG - Chr2:15512064-15512083 MsG0280007441.01.T01:intron 45.0%
AAGATATGCTGGGAGCTGTA+AGG + Chr2:15511689-15511708 None:intergenic 45.0%
AATCTCGAGGATCAGAATGG+GGG - Chr2:15509541-15509560 MsG0280007441.01.T01:intron 45.0%
AATTCTTGCTGCTCCAAACG+TGG + Chr2:15508206-15508225 None:intergenic 45.0%
ACTAGAGGAGCAGAAAAACG+AGG - Chr2:15512049-15512068 MsG0280007441.01.T01:intron 45.0%
ACTGAAGAGTGAAGGATGGT+GGG + Chr2:15511800-15511819 None:intergenic 45.0%
AGACAAGTGCTACAACTGTG+AGG + Chr2:15511596-15511615 None:intergenic 45.0%
AGCTGAATGATATGGGTCTG+TGG - Chr2:15511555-15511574 MsG0280007441.01.T01:intron 45.0%
AGTTGCTTCTGTGGTAGACT+TGG - Chr2:15511455-15511474 MsG0280007441.01.T01:intron 45.0%
ATACCATCAATGCACCGAGA+TGG - Chr2:15510099-15510118 MsG0280007441.01.T01:intron 45.0%
ATGTAGTCGAGGTGGTTAGT+GGG - Chr2:15508046-15508065 MsG0280007441.01.T01:intron 45.0%
CAGCCTTGCAAAGATATGCT+GGG + Chr2:15511699-15511718 None:intergenic 45.0%
CATTCGCAAAGCCGACAAAA+AGG + Chr2:15509950-15509969 None:intergenic 45.0%
CTAGCATGAATGTACCGAGA+TGG - Chr2:15508833-15508852 MsG0280007441.01.T01:CDS 45.0%
CTCTCCATCGTGTCAGTATA+TGG - Chr2:15509293-15509312 MsG0280007441.01.T01:intron 45.0%
CTTCTGTGGTAGACTTGGAT+AGG - Chr2:15511460-15511479 MsG0280007441.01.T01:intron 45.0%
GATGTAGGTTGCTGTACTAG+AGG - Chr2:15512034-15512053 MsG0280007441.01.T01:intron 45.0%
GCAATGACATGGTTGCAATC+TGG - Chr2:15512001-15512020 MsG0280007441.01.T01:intron 45.0%
GGGCTATTTAATGCCTCTCA+GGG - Chr2:15509499-15509518 MsG0280007441.01.T01:intron 45.0%
GTAGCACTTGTCTCCATAGA+TGG - Chr2:15511603-15511622 MsG0280007441.01.T01:intron 45.0%
GTGGAACTAGGGCTATAAGT+TGG - Chr2:15508741-15508760 MsG0280007441.01.T01:CDS 45.0%
TACTGAAGAGTGAAGGATGG+TGG + Chr2:15511801-15511820 None:intergenic 45.0%
TACTGACACGATGGAGAGAT+CGG + Chr2:15509291-15509310 None:intergenic 45.0%
TAGAGGTGGATCGGAGTAAT+CGG - Chr2:15507592-15507611 MsG0280007441.01.T01:CDS 45.0%
TATAGATGCCACGTGGTGAA+AGG - Chr2:15510125-15510144 MsG0280007441.01.T01:intron 45.0%
TCACTGGACCGGTTAGAAAA+TGG - Chr2:15507702-15507721 MsG0280007441.01.T01:intron 45.0%
TCAGCCTCAGGACAAAAATC+AGG - Chr2:15513325-15513344 MsG0280007441.01.T01:five_prime_UTR 45.0%
TGGCCATAGTCAGAGTCTAA+TGG - Chr2:15509179-15509198 MsG0280007441.01.T01:intron 45.0%
TGGGCTATTTAATGCCTCTC+AGG - Chr2:15509498-15509517 MsG0280007441.01.T01:intron 45.0%
TGGTAGATGGAAGGAAGACA+TGG + Chr2:15511205-15511224 None:intergenic 45.0%
TTGTCTCCCTCCAATACTGT+TGG + Chr2:15509108-15509127 None:intergenic 45.0%
TTTGCCTCTGCATCTCTGAT+AGG - Chr2:15510916-15510935 MsG0280007441.01.T01:intron 45.0%
! AACAGTATTGGAGGGAGACA+AGG - Chr2:15509107-15509126 MsG0280007441.01.T01:intron 45.0%
! AGACGTGGTTGTTGTTGTTC+GGG - Chr2:15508072-15508091 MsG0280007441.01.T01:intron 45.0%
! ATGGCTTGTGCAACCTTCAA+CGG - Chr2:15511314-15511333 MsG0280007441.01.T01:intron 45.0%
! ATTTTCCCAAGGGAACACTG+AGG + Chr2:15511278-15511297 None:intergenic 45.0%
! CATGGATTGCTGACCATCTT+GGG - Chr2:15510590-15510609 MsG0280007441.01.T01:intron 45.0%
! CGAAGTTGACTTCAAGTTCC+AGG + Chr2:15511870-15511889 None:intergenic 45.0%
! GCGGTAGTTTTTGTGAGGAT+AGG - Chr2:15510205-15510224 MsG0280007441.01.T01:intron 45.0%
! GGAGCAGCAAGAATTGATTC+TGG - Chr2:15508211-15508230 MsG0280007441.01.T01:intron 45.0%
! TTTCCATCTCGGTGCATTGA+TGG + Chr2:15510105-15510124 None:intergenic 45.0%
!! AACGCCAACGGTAATGGAAA+TGG - Chr2:15507878-15507897 MsG0280007441.01.T01:intron 45.0%
!! AGGATGGATTGCTGATCATC+TGG - Chr2:15509336-15509355 MsG0280007441.01.T01:intron 45.0%
!! GCCATCATTCTGAGACGTTA+GGG - Chr2:15512719-15512738 MsG0280007441.01.T01:intron 45.0%
!! GGATGGATTGCTGATCATCT+GGG - Chr2:15509337-15509356 MsG0280007441.01.T01:intron 45.0%
!!! TTATTTTTTAATATATCTTT+AGG - Chr2:15509316-15509335 MsG0280007441.01.T01:intron 5.0%
AAACCGTTGCTGGTCCGTAA+CGG + Chr2:15507682-15507701 None:intergenic 50.0%
ACACTACCTCAGTGTTCCCT+TGG - Chr2:15511269-15511288 MsG0280007441.01.T01:intron 50.0%
ACTCAACACCTTTCACCACG+TGG + Chr2:15510136-15510155 None:intergenic 50.0%
CAAAGCCAGAACAACGCCAA+CGG - Chr2:15507866-15507885 MsG0280007441.01.T01:intron 50.0%
CACTACCTCAGTGTTCCCTT+GGG - Chr2:15511270-15511289 MsG0280007441.01.T01:intron 50.0%
CAGAACAACGCCAACGGTAA+TGG - Chr2:15507872-15507891 MsG0280007441.01.T01:intron 50.0%
CAGTAGTATGGGGATTGGGA+AGG - Chr2:15511979-15511998 MsG0280007441.01.T01:intron 50.0%
CATGTAGTCGAGGTGGTTAG+TGG - Chr2:15508045-15508064 MsG0280007441.01.T01:intron 50.0%
CATTACCGTTGGCGTTGTTC+TGG + Chr2:15507874-15507893 None:intergenic 50.0%
CTTTATCCAGCTCCAACGAG+GGG - Chr2:15511767-15511786 MsG0280007441.01.T01:intron 50.0%
GCAGCCTTGCAAAGATATGC+TGG + Chr2:15511700-15511719 None:intergenic 50.0%
GCCCTAACGTCTCAGAATGA+TGG + Chr2:15512723-15512742 None:intergenic 50.0%
GCTCCCAGCATATCTTTGCA+AGG - Chr2:15511693-15511712 MsG0280007441.01.T01:intron 50.0%
GCTTTATCCAGCTCCAACGA+GGG - Chr2:15511766-15511785 MsG0280007441.01.T01:intron 50.0%
GGATTGGGAAGGCAATGACA+TGG - Chr2:15511990-15512009 MsG0280007441.01.T01:intron 50.0%
GTGGTTAGTGGGATAAGACG+TGG - Chr2:15508057-15508076 MsG0280007441.01.T01:intron 50.0%
TATGGATGCCTTACGGTGAG+CGG - Chr2:15508859-15508878 MsG0280007441.01.T01:CDS 50.0%
TATTTAAACTTGCGCCGCGG+TGG + Chr2:15507941-15507960 None:intergenic 50.0%
TGACATGTTCGGTTGCTCTC+TGG - Chr2:15508251-15508270 MsG0280007441.01.T01:intron 50.0%
TGTCCCAATGGAAGAAAGCG+AGG - Chr2:15512193-15512212 MsG0280007441.01.T01:intron 50.0%
TTAGCCGCTGCATCACTGAT+AGG - Chr2:15509622-15509641 MsG0280007441.01.T01:intron 50.0%
TTTATCCAGCTCCAACGAGG+GGG - Chr2:15511768-15511787 MsG0280007441.01.T01:intron 50.0%
! AGCAACGGTTTTCACTGGAC+CGG - Chr2:15507691-15507710 MsG0280007441.01.T01:intron 50.0%
! AGCTTTATCCAGCTCCAACG+AGG - Chr2:15511765-15511784 MsG0280007441.01.T01:intron 50.0%
! ATGCCGAGCACTGTCGAAAA+AGG + Chr2:15511038-15511057 None:intergenic 50.0%
! GCATGGATTGCTGACCATCT+TGG - Chr2:15510589-15510608 MsG0280007441.01.T01:intron 50.0%
! TGGTAGTGTTAAGGATGCGG+CGG - Chr2:15507898-15507917 MsG0280007441.01.T01:intron 50.0%
!! AAGAGTGTTGGAGGGAGACA+AGG - Chr2:15510362-15510381 MsG0280007441.01.T01:intron 50.0%
!! GGCCATCATTCTGAGACGTT+AGG - Chr2:15512718-15512737 MsG0280007441.01.T01:intron 50.0%
!! GTGAAAGGTGTTGAGTGCTG+TGG - Chr2:15510140-15510159 MsG0280007441.01.T01:intron 50.0%
AACCGTTGCTGGTCCGTAAC+GGG + Chr2:15507681-15507700 None:intergenic 55.0%
GGTCCAGTGAAAACCGTTGC+TGG + Chr2:15507692-15507711 None:intergenic 55.0%
GGTGGATCGGAGTAATCGGA+AGG - Chr2:15507596-15507615 MsG0280007441.01.T01:CDS 55.0%
TAGTGTTAAGGATGCGGCGG+TGG - Chr2:15507901-15507920 MsG0280007441.01.T01:intron 55.0%
! GCGTCGTGGTGCTGAGATAA+CGG - Chr2:15508892-15508911 MsG0280007441.01.T01:intron 55.0%
! GGACCAGCAACGGTTTTCAC+TGG - Chr2:15507686-15507705 MsG0280007441.01.T01:intron 55.0%
!! AGAGTGAAGGATGGTGGGAC+TGG + Chr2:15511795-15511814 None:intergenic 55.0%
!! GAGTGAAGGATGGTGGGACT+GGG + Chr2:15511794-15511813 None:intergenic 55.0%
GACAGACACCGCTCACCGTA+AGG + Chr2:15508870-15508889 None:intergenic 60.0%
GACCCGTTACGGACCAGCAA+CGG - Chr2:15507676-15507695 MsG0280007441.01.T01:intron 60.0%
AAGGAGTTGGGGCCCGACTG+GGG - Chr2:15507645-15507664 MsG0280007441.01.T01:intron 65.0%
GAAGGAGTTGGGGCCCGACT+GGG - Chr2:15507644-15507663 MsG0280007441.01.T01:intron 65.0%
TAAGGATGCGGCGGTGGAGC+CGG - Chr2:15507907-15507926 MsG0280007441.01.T01:intron 65.0%
!! TGCTGGTCCGTAACGGGTCG+AGG + Chr2:15507675-15507694 None:intergenic 65.0%
AGCCGGTGGAAGAGCCACCG+CGG - Chr2:15507924-15507943 MsG0280007441.01.T01:intron 70.0%
GGAAGGAGTTGGGGCCCGAC+TGG - Chr2:15507643-15507662 MsG0280007441.01.T01:intron 70.0%
GGGCGGTCCTCGACCCGTTA+CGG - Chr2:15507665-15507684 MsG0280007441.01.T01:intron 70.0%
! GCGGTGTCTGTCGAGCGTCG+TGG - Chr2:15508878-15508897 MsG0280007441.01.T01:CDS 70.0%
CGCCGCGGTGGCTCTTCCAC+CGG + Chr2:15507929-15507948 None:intergenic 75.0%
CTGGGCCCCCTCGTTGGAGC+TGG + Chr2:15511776-15511795 None:intergenic 75.0%
GAGTTGGGGCCCGACTGGGG+CGG - Chr2:15507648-15507667 MsG0280007441.01.T01:intron 75.0%
GGGTCGAGGACCGCCCCAGT+CGG + Chr2:15507661-15507680 None:intergenic 75.0%
GGTCGAGGACCGCCCCAGTC+GGG + Chr2:15507660-15507679 None:intergenic 75.0%
GTGGGACTGGGCCCCCTCGT+TGG + Chr2:15511782-15511801 None:intergenic 75.0%
! GGATGCGGCGGTGGAGCCGG+TGG - Chr2:15507910-15507929 MsG0280007441.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr2 gene 15507489 15513457 15507489 ID=MsG0280007441.01;Name=MsG0280007441.01
Chr2 mRNA 15507489 15513457 15507489 ID=MsG0280007441.01.T01;Parent=MsG0280007441.01;Name=MsG0280007441.01.T01;_AED=0.44;_eAED=0.45;_QI=152|0.5|0.66|1|0.5|0.66|3|0|214
Chr2 exon 15507489 15507632 15507489 ID=MsG0280007441.01.T01:exon:3367;Parent=MsG0280007441.01.T01
Chr2 exon 15508732 15508905 15508732 ID=MsG0280007441.01.T01:exon:3366;Parent=MsG0280007441.01.T01
Chr2 exon 15512979 15513457 15512979 ID=MsG0280007441.01.T01:exon:3365;Parent=MsG0280007441.01.T01
Chr2 five_prime_UTR 15513306 15513457 15513306 ID=MsG0280007441.01.T01:five_prime_utr;Parent=MsG0280007441.01.T01
Chr2 CDS 15512979 15513305 15512979 ID=MsG0280007441.01.T01:cds;Parent=MsG0280007441.01.T01
Chr2 CDS 15508732 15508905 15508732 ID=MsG0280007441.01.T01:cds;Parent=MsG0280007441.01.T01
Chr2 CDS 15507489 15507632 15507489 ID=MsG0280007441.01.T01:cds;Parent=MsG0280007441.01.T01
Gene Sequence

>MsG0280007441.01.T01

ATGGAAGGAGTTGGGGCCCGACTGGGGCGGTCCTCGACCCGTTACGGACCAGCAACGGTTTTCACTGGACCGGTTAGAAAATGGAAGAAGAAATGGGTTCATGTTTCACCTTCATCTTCTTCATCGAATTCCAACAACAACAACAACGCGAATCAAAATCACGTTAACGGTAGTAACGGTAATAACGGTTCTCATCTTCTTCTTTTTAAGTGGACTCCTATTACTCAAAGCCAGAACAACGCCAACGGTAATGGAAATGGTAGTGTTAAGGATGCGGCGGTGGAGCCGGTGGAAGAGCCACCGCGGCGCAAGTTTAAATATGTTCCGGTTGCTGTACTAGAGGAGCAGAAAAACGAGGCTACAGAAGATGAGGTTACCGAAAAGGTTGAAGATGAATCTAATCCAATAGAGGCTGATTCAATTGCAGCAGAACCAACCAGCAAGAATGAGACTTTGGATGAAAAACCTGATATAAATGATGTCCCAATGGAAGAAAGCGAGGACTTTATATTTCAGCCTCAGGACAAAAATCAGGTAGTACGCCAAGATCTCAATGAAAGTTTGGATTTGAGTTTGGGTTTGACATCACATGATGAAGATCAAGATTCTGATTCAAAAACTAATCAACCTACAGATGGTCAGTAA

Protein sequence

>MsG0280007441.01.T01

MEGVGARLGRSSTRYGPATVFTGPVRKWKKKWVHVSPSSSSSNSNNNNNANQNHVNGSNGNNGSHLLLFKWTPITQSQNNANGNGNGSVKDAAVEPVEEPPRRKFKYVPVAVLEEQKNEATEDEVTEKVEDESNPIEADSIAAEPTSKNETLDEKPDINDVPMEESEDFIFQPQDKNQVVRQDLNESLDLSLGLTSHDEDQDSDSKTNQPTDGQ*