AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017003.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017003.01.T02 MTR_3g098600 90.909 506 17 4 35 519 20 517 0.0 915
MsG0380017003.01.T02 MTR_8g100180 53.911 473 178 5 59 515 59 507 1.77e-170 491
MsG0380017003.01.T01 MTR_3g098600 90.909 506 17 4 35 519 20 517 0.0 915
MsG0380017003.01.T01 MTR_8g100180 53.911 473 178 5 59 515 59 507 3.60e-168 490
MsG0380017003.01.T01 MTR_3g099260 47.967 123 57 2 495 616 44 160 2.35e-30 117
MsG0380017003.01.T01 MTR_3g100280 33.071 127 81 3 518 640 163 289 1.78e-16 83.6
MsG0380017003.01.T01 MTR_3g100280 33.071 127 81 3 518 640 326 452 3.27e-16 82.8
MsG0380017003.01.T01 MTR_5g032090 32.540 126 81 3 518 639 314 439 1.27e-15 80.9
MsG0380017003.01.T01 MTR_3g100320 32.283 127 82 3 518 640 317 443 6.13e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017003.01.T02 AT5G50970 61.474 475 145 9 59 517 59 511 0.0 555
MsG0380017003.01.T02 AT5G19920 54.469 358 148 1 175 517 298 655 3.69e-135 406
MsG0380017003.01.T01 AT5G50970 61.474 475 145 9 59 517 59 511 0.0 553
MsG0380017003.01.T01 AT5G19920 54.469 358 148 1 175 517 298 655 5.98e-133 405
MsG0380017003.01.T01 AT5G10490 30.709 127 84 3 518 640 289 415 5.01e-15 79.0
MsG0380017003.01.T01 AT5G10490 30.709 127 84 3 518 640 317 443 5.54e-15 79.0
MsG0380017003.01.T01 AT5G10490 30.709 127 84 3 518 640 315 441 5.57e-15 79.0
MsG0380017003.01.T01 AT1G58200 28.421 190 117 6 458 639 266 444 9.80e-15 78.2
MsG0380017003.01.T01 AT1G58200 28.421 190 117 6 458 639 266 444 9.80e-15 78.2

Find 91 sgRNAs with CRISPR-Local

Find 892 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGGATTGTCTTGGTTTA+TGG 0.132763 3:+90551348 MsG0380017003.01.T01:three_prime_UTR
AGTAAAGAAAAGAATTTATT+TGG 0.151676 3:+90548580 MsG0380017003.01.T01:intron
CGGACAGAACTTCATGCTTT+TGG 0.187053 3:+90548173 MsG0380017003.01.T01:CDS
TTTATTTGGAACGGTAAATT+AGG 0.206467 3:+90548594 MsG0380017003.01.T01:intron
TTTGCTCTGAAAATGTTATT+TGG 0.263514 3:+90551394 MsG0380017003.01.T01:three_prime_UTR
AGGAGCAACCATGTGGCTTT+TGG 0.293560 3:-90551531 None:intergenic
CCAAGACAATCCCTTGGATT+TGG 0.316783 3:-90551341 None:intergenic
GAAAATAGAGAAAGCATAAA+AGG 0.317945 3:-90551666 None:intergenic
TGAGGCTTCACTGCTGCTAT+TGG 0.332562 3:+90551371 MsG0380017003.01.T01:three_prime_UTR
GCTCACCAGAAAAGAGTCTT+TGG 0.350080 3:+90548347 MsG0380017003.01.T01:CDS
ATATAAGATATAATCTTAAC+AGG 0.350592 3:+90548306 MsG0380017003.01.T01:CDS
TCTCAGTTAGATCAGTTTAC+CGG 0.355123 3:+90551117 MsG0380017003.01.T01:three_prime_UTR
CTCCTGGTACACAGACTATA+GGG 0.363363 3:+90549124 MsG0380017003.01.T01:CDS
TCAATATTCAGTTTCTCAAC+TGG 0.367640 3:-90548920 None:intergenic
ACAGAACACTTTACTTCATC+AGG 0.377058 3:-90548439 None:intergenic
AATTTCTCGATCAACTTCAT+AGG 0.389290 3:-90551025 None:intergenic
AGGCCTCGATGGCCTTCCTT+TGG 0.393394 3:+90551568 MsG0380017003.01.T01:three_prime_UTR
TCATTGTAGAGTATTCTAAC+TGG 0.403512 3:+90549030 MsG0380017003.01.T01:intron
TTATGAATGGAGAGATCGTT+AGG 0.415316 3:+90548825 MsG0380017003.01.T01:CDS
GATGGTCTTTATATAACATC+TGG 0.422463 3:+90548254 MsG0380017003.01.T01:CDS
GCTCCTCCACTTGTAGATAT+AGG 0.439919 3:+90551548 MsG0380017003.01.T01:three_prime_UTR
GCTCCTGGTACACAGACTAT+AGG 0.442977 3:+90549123 MsG0380017003.01.T01:CDS
TCTTCTGTTCGACTTATGAA+TGG 0.446080 3:+90548812 MsG0380017003.01.T01:CDS
GGATTGGTCTCTTTACTACA+TGG 0.448627 3:+90551611 MsG0380017003.01.T01:three_prime_UTR
ATGGAGTGGATCCTCTCTAA+TGG 0.455892 3:+90551471 MsG0380017003.01.T01:three_prime_UTR
TCAATGCTGGTGCAAAGATT+TGG 0.470312 3:+90551420 MsG0380017003.01.T01:three_prime_UTR
GATGTTATATAAAGACCATC+AGG 0.485540 3:-90548251 None:intergenic
GTTCACTTTGATGCCGCTCC+TGG 0.489159 3:+90549108 MsG0380017003.01.T01:CDS
ACCCCTATAGTCTGTGTACC+AGG 0.490389 3:-90549126 None:intergenic
AGAAAAGAATTTATTTGGAA+CGG 0.493523 3:+90548585 MsG0380017003.01.T01:intron
CTCAGTTAGATCAGTTTACC+GGG 0.498450 3:+90551118 MsG0380017003.01.T01:three_prime_UTR
CCAAATCCAAGGGATTGTCT+TGG 0.500983 3:+90551341 MsG0380017003.01.T01:three_prime_UTR
GAGACTGTAGTCCGAGGGAT+TGG 0.502001 3:+90551063 MsG0380017003.01.T01:three_prime_UTR
AACTGGAATGGCTGGCGTGT+TGG 0.502944 3:+90549047 MsG0380017003.01.T01:CDS
CAGCTCTGATTAATCAAGCT+TGG 0.504969 3:+90548225 MsG0380017003.01.T01:CDS
GTTTCTCAACTGGAATGTAA+AGG 0.505483 3:-90548910 None:intergenic
TATCATCTGATCTCAACATT+GGG 0.505917 3:+90548408 MsG0380017003.01.T01:CDS
TAATATGCCTGAGGATGTAC+AGG 0.506964 3:+90551253 MsG0380017003.01.T01:three_prime_UTR
ATATCATCTGATCTCAACAT+TGG 0.509338 3:+90548407 MsG0380017003.01.T01:CDS
ACATTGACATTTGTGTGGAT+TGG 0.513505 3:+90551595 MsG0380017003.01.T01:three_prime_UTR
TGTTATTTGGCAATCAATGC+TGG 0.524390 3:+90551407 MsG0380017003.01.T01:three_prime_UTR
GATTGTCTTGGTTTATGGTG+AGG 0.527670 3:+90551353 MsG0380017003.01.T01:three_prime_UTR
CTCAATGATGTCCAAATCCA+AGG 0.531628 3:+90551330 MsG0380017003.01.T01:three_prime_UTR
AAATGTCAATGTGGCTCCAA+AGG 0.532142 3:-90551584 None:intergenic
ACCGACAACATTGTGCAAAA+CGG 0.532161 3:+90548866 MsG0380017003.01.T01:CDS
AGAAATTTGACTGTAAATTG+TGG 0.533258 3:+90551041 MsG0380017003.01.T01:exon
ATATCAAATATGTGAATCAC+AGG 0.533530 3:-90548287 None:intergenic
AGTATTCTAACTGGAATGGC+TGG 0.533707 3:+90549039 MsG0380017003.01.T01:CDS
AGGATGTACAGGTGTTATCA+TGG 0.539714 3:+90551264 MsG0380017003.01.T01:three_prime_UTR
CGACTCGTTCCTTACCATGA+AGG 0.540033 3:+90550885 MsG0380017003.01.T01:CDS
TTGCAGCTTTGTATATGGAG+TGG 0.543085 3:+90551457 MsG0380017003.01.T01:three_prime_UTR
GGAAAGGCATGCTTAGATGT+TGG 0.543340 3:+90548630 MsG0380017003.01.T01:intron
TGCAAAACGGTACTCATGAC+GGG 0.547006 3:+90548879 MsG0380017003.01.T01:CDS
GATGATATAGATATGAGAAG+AGG 0.551317 3:-90548392 None:intergenic
GTCAATGTGGCTCCAAAGGA+AGG 0.551664 3:-90551580 None:intergenic
GTAGAGTATTCTAACTGGAA+TGG 0.554593 3:+90549035 MsG0380017003.01.T01:intron
GATAACACCTGTACATCCTC+AGG 0.560895 3:-90551260 None:intergenic
GTGCAAAACGGTACTCATGA+CGG 0.562549 3:+90548878 MsG0380017003.01.T01:CDS
TTGTGTTTGAAGCATTTGAA+AGG 0.566126 3:+90551194 MsG0380017003.01.T01:three_prime_UTR
GATTATTTGATATTAGATTG+AGG 0.569773 3:+90548150 MsG0380017003.01.T01:CDS
TTTGGAGAACTTAAAAGGTG+AGG 0.572537 3:-90551513 None:intergenic
TTGTGGAGACTGTAGTCCGA+GGG 0.573769 3:+90551058 MsG0380017003.01.T01:three_prime_UTR
CATAAACCAAGACAATCCCT+TGG 0.573780 3:-90551347 None:intergenic
AAAGAGTCTTTGGAGCCTTG+TGG 0.589884 3:+90548357 MsG0380017003.01.T01:CDS
TGTCGGTGAGCTTGTGCGTA+GGG 0.591794 3:-90548850 None:intergenic
TAAGTATTCATTATGTAAAG+CGG 0.592657 3:-90551094 None:intergenic
TCTACCACTGTCAAGGAACC+CGG 0.595519 3:-90551136 None:intergenic
TATGAATGGAGAGATCGTTA+GGG 0.603650 3:+90548826 MsG0380017003.01.T01:CDS
TCAATGATGTCCAAATCCAA+GGG 0.606069 3:+90551331 MsG0380017003.01.T01:three_prime_UTR
TTCTTAATAGTTAACTAACA+AGG 0.606712 3:-90551757 None:intergenic
AATCAAGCTTGGTCTCCTGA+TGG 0.607887 3:+90548236 MsG0380017003.01.T01:CDS
TTGTCGGTGAGCTTGTGCGT+AGG 0.608745 3:-90548851 None:intergenic
CTTGTAGATATAGGCCTCGA+TGG 0.609929 3:+90551557 MsG0380017003.01.T01:three_prime_UTR
TTATATAACATCTGGTTCAG+CGG 0.612784 3:+90548262 MsG0380017003.01.T01:CDS
GAGCCACATTGACATTTGTG+TGG 0.618520 3:+90551590 MsG0380017003.01.T01:three_prime_UTR
ACTGAATATTGACAAACTGA+AGG 0.623913 3:+90548931 MsG0380017003.01.T01:CDS
CAGAACACTTTACTTCATCA+GGG 0.627232 3:-90548438 None:intergenic
TAAGTTCTCCAAAAGCCACA+TGG 0.632535 3:+90551523 MsG0380017003.01.T01:three_prime_UTR
TCGAGGCCTATATCTACAAG+TGG 0.649058 3:-90551554 None:intergenic
AGGAATAGACTGAAGCCACA+AGG 0.650340 3:-90548372 None:intergenic
TCCTGGTACACAGACTATAG+GGG 0.654125 3:+90549125 MsG0380017003.01.T01:CDS
AGGCCTATATCTACAAGTGG+AGG 0.662830 3:-90551551 None:intergenic
TATAGTCTGTGTACCAGGAG+CGG 0.673197 3:-90549121 None:intergenic
GCTCCAAAGGAAGGCCATCG+AGG 0.682098 3:-90551571 None:intergenic
ATTGTGGAGACTGTAGTCCG+AGG 0.682547 3:+90551057 MsG0380017003.01.T01:three_prime_UTR
TTTACCGGGTTCCTTGACAG+TGG 0.685013 3:+90551132 MsG0380017003.01.T01:three_prime_UTR
GGGTATAGATAATATGCCTG+AGG 0.685848 3:+90551244 MsG0380017003.01.T01:three_prime_UTR
TATTTGATATTAGATTGAGG+CGG 0.699704 3:+90548153 MsG0380017003.01.T01:CDS
AATCCACACAAATGTCAATG+TGG 0.704285 3:-90551593 None:intergenic
AATAACAACACTAAACAAGG+AGG 0.720892 3:-90551688 None:intergenic
CAAGTGGAGGAGCAACCATG+TGG 0.733344 3:-90551538 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTGATTTTAATTTTTAA+TGG + Chr3:90540058-90540077 MsG0380017003.01.T01:intron 10.0%
!!! TTTTAATTTGATTTTAATGT+TGG + Chr3:90541432-90541451 MsG0380017003.01.T01:intron 10.0%
!! AAAATATGAATTAGATTATG+TGG - Chr3:90546486-90546505 None:intergenic 15.0%
!! AAAATTTAAACTTTGGATTT+AGG + Chr3:90546725-90546744 MsG0380017003.01.T01:intron 15.0%
!! AAATATGAATTAGATTATGT+GGG - Chr3:90546485-90546504 None:intergenic 15.0%
!! AAATTGGAATAAAATTAAAG+GGG + Chr3:90546675-90546694 MsG0380017003.01.T01:CDS 15.0%
!! AATCAATATTATTATCAAGT+AGG - Chr3:90547921-90547940 None:intergenic 15.0%
!! AATTTAAATATTCAGAAACA+AGG - Chr3:90543300-90543319 None:intergenic 15.0%
!! ACAAATTGGAATAAAATTAA+AGG + Chr3:90546673-90546692 MsG0380017003.01.T01:CDS 15.0%
!! ACTTAAAATCAAAAAAATTC+TGG + Chr3:90540676-90540695 MsG0380017003.01.T01:intron 15.0%
!! AGTAAAGAAAAGAATTTATT+TGG + Chr3:90548580-90548599 MsG0380017003.01.T01:intron 15.0%
!! ATAGTCAAAATACAATTAAA+TGG - Chr3:90546356-90546375 None:intergenic 15.0%
!! ATATAAGATATAATCTTAAC+AGG + Chr3:90548306-90548325 MsG0380017003.01.T01:CDS 15.0%
!! ATATTGAAAAGAAAAATTGT+GGG - Chr3:90542448-90542467 None:intergenic 15.0%
!! ATTAAGTAATTAATGGTAAA+GGG - Chr3:90542299-90542318 None:intergenic 15.0%
!! ATTATCCTTTATTAATGATA+TGG - Chr3:90542351-90542370 None:intergenic 15.0%
!! ATTTAAATATTCAGAAACAA+GGG - Chr3:90543299-90543318 None:intergenic 15.0%
!! ATTTATAGATTATAGGTATT+AGG + Chr3:90544080-90544099 MsG0380017003.01.T01:intron 15.0%
!! CAAATTGGAATAAAATTAAA+GGG + Chr3:90546674-90546693 MsG0380017003.01.T01:CDS 15.0%
!! CTGGTAATAATTTATAAAAA+TGG + Chr3:90544272-90544291 MsG0380017003.01.T01:intron 15.0%
!! TAATGAAATAATAGAGAAAA+TGG + Chr3:90543127-90543146 MsG0380017003.01.T01:intron 15.0%
!! TAGTCAAAATACAATTAAAT+GGG - Chr3:90546355-90546374 None:intergenic 15.0%
!! TATATTGAAAAGAAAAATTG+TGG - Chr3:90542449-90542468 None:intergenic 15.0%
!! TCTAAACCAATTAAAAAAAA+AGG - Chr3:90549186-90549205 None:intergenic 15.0%
!! TTAATTAATTTCACAAACTT+AGG - Chr3:90543339-90543358 None:intergenic 15.0%
!! TTATCCTTTATTAATGATAT+GGG - Chr3:90542350-90542369 None:intergenic 15.0%
!!! AAAAAACAATTTAGTTTGTT+TGG + Chr3:90542053-90542072 MsG0380017003.01.T01:intron 15.0%
!!! AAAGTTTAAATTTTATGTCA+GGG - Chr3:90546719-90546738 None:intergenic 15.0%
!!! AAATTAGGAAAATTTTGATT+GGG + Chr3:90548609-90548628 MsG0380017003.01.T01:intron 15.0%
!!! AGTTTTTTTTTCTTATATTG+CGG - Chr3:90541132-90541151 None:intergenic 15.0%
!!! ATTGGTAATAATGTAAATAA+TGG + Chr3:90543919-90543938 MsG0380017003.01.T01:intron 15.0%
!!! TAAATTAGGAAAATTTTGAT+TGG + Chr3:90548608-90548627 MsG0380017003.01.T01:intron 15.0%
!!! TAATTTAACATTTTTCTTAG+AGG - Chr3:90542531-90542550 None:intergenic 15.0%
!!! TATTTTAATTTGTAACAAAC+AGG - Chr3:90541931-90541950 None:intergenic 15.0%
!!! TGATTTTAATTTTTAATGGA+TGG + Chr3:90540062-90540081 MsG0380017003.01.T01:intron 15.0%
!!! TTCAAATGTAAATTCTAAAA+TGG + Chr3:90545232-90545251 MsG0380017003.01.T01:intron 15.0%
!!! TTTTGTATTTCTTACAAAAT+AGG + Chr3:90541314-90541333 MsG0380017003.01.T01:intron 15.0%
!!! TTTTTATTTGTCTATAGATT+AGG + Chr3:90544123-90544142 MsG0380017003.01.T01:intron 15.0%
!!! TTTTTTTCTTTCAAAAAACA+AGG + Chr3:90541805-90541824 MsG0380017003.01.T01:intron 15.0%
!! AAAAACATAAGCTACAAAAA+TGG - Chr3:90548981-90549000 None:intergenic 20.0%
!! AAAAATAACAACACTAAACA+AGG - Chr3:90551694-90551713 None:intergenic 20.0%
!! AAAATAAAGCTATTTGTAGT+GGG + Chr3:90541772-90541791 MsG0380017003.01.T01:intron 20.0%
!! AAAGGAGATTAAGTAATTAA+TGG - Chr3:90542306-90542325 None:intergenic 20.0%
!! AATATAAGCTTAAACCAAAA+CGG - Chr3:90545267-90545286 None:intergenic 20.0%
!! AATATGATGAATCAATATCT+AGG + Chr3:90545149-90545168 MsG0380017003.01.T01:intron 20.0%
!! ACTCGTTAATAATGATTAAT+AGG + Chr3:90545002-90545021 MsG0380017003.01.T01:intron 20.0%
!! ACTTGAAAAAACAAACAAAA+TGG - Chr3:90546296-90546315 None:intergenic 20.0%
!! AGAAAAGAATTTATTTGGAA+CGG + Chr3:90548585-90548604 MsG0380017003.01.T01:intron 20.0%
!! AGATGTAATTTAGAAATCAT+AGG - Chr3:90550648-90550667 None:intergenic 20.0%
!! ATAAAACAGAAACTATGATT+TGG - Chr3:90550576-90550595 None:intergenic 20.0%
!! ATAAGAATTGAAAAAGACAT+TGG + Chr3:90543019-90543038 MsG0380017003.01.T01:intron 20.0%
!! ATATTTCGGATTATATAATC+CGG - Chr3:90540122-90540141 None:intergenic 20.0%
!! ATCATGTAACAGTAAATTAA+AGG + Chr3:90550696-90550715 MsG0380017003.01.T01:intron 20.0%
!! ATTGAAAAGAGAAATTGTAA+GGG - Chr3:90542384-90542403 None:intergenic 20.0%
!! CAATAAAAAATTTCACCATA+AGG - Chr3:90547619-90547638 None:intergenic 20.0%
!! CATAAATAGAATTTCTGTTA+TGG - Chr3:90542905-90542924 None:intergenic 20.0%
!! CATAACAGAAATTCTATTTA+TGG + Chr3:90542903-90542922 MsG0380017003.01.T01:intron 20.0%
!! CTGACATAAAATTTAAACTT+TGG + Chr3:90546718-90546737 MsG0380017003.01.T01:intron 20.0%
!! GACATTCATTTATAGATTAT+AGG + Chr3:90544073-90544092 MsG0380017003.01.T01:intron 20.0%
!! GATTAAGTAATTAATGGTAA+AGG - Chr3:90542300-90542319 None:intergenic 20.0%
!! GATTATTTGATATTAGATTG+AGG + Chr3:90548150-90548169 MsG0380017003.01.T01:CDS 20.0%
!! GGATACAACTATAAAAAAAA+TGG + Chr3:90542074-90542093 MsG0380017003.01.T01:intron 20.0%
!! GGTAAAATGAGAATTATAAA+AGG - Chr3:90545039-90545058 None:intergenic 20.0%
!! TAAGTATTCATTATGTAAAG+CGG - Chr3:90551097-90551116 None:intergenic 20.0%
!! TATTGAAAAGAGAAATTGTA+AGG - Chr3:90542385-90542404 None:intergenic 20.0%
!! TCATTTGAATTCAAATCATA+AGG + Chr3:90550533-90550552 MsG0380017003.01.T01:intron 20.0%
!! TGATTAAATGTAATGCATAT+GGG + Chr3:90544007-90544026 MsG0380017003.01.T01:intron 20.0%
!! TGTAGAAAATAAAAGCAAAA+AGG - Chr3:90547211-90547230 None:intergenic 20.0%
!! TGTATATTTACTTGGTATAT+TGG + Chr3:90544625-90544644 MsG0380017003.01.T01:intron 20.0%
!! TTCTTAATAGTTAACTAACA+AGG - Chr3:90551760-90551779 None:intergenic 20.0%
!! TTGATTAAATGTAATGCATA+TGG + Chr3:90544006-90544025 MsG0380017003.01.T01:intron 20.0%
!! TTTCCTTATTCTTTCTAATA+AGG + Chr3:90549211-90549230 MsG0380017003.01.T01:intron 20.0%
!!! ATATCTAGGCTTATAATTTT+AGG + Chr3:90545163-90545182 MsG0380017003.01.T01:intron 20.0%
!!! ATTGGAAACAAAAAGAATTT+TGG + Chr3:90547462-90547481 MsG0380017003.01.T01:intron 20.0%
!!! ATTTATTGACTATAGGTATT+AGG + Chr3:90543749-90543768 MsG0380017003.01.T01:intron 20.0%
!!! CAAAGTTTAAATTTTATGTC+AGG - Chr3:90546720-90546739 None:intergenic 20.0%
!!! GAAGAAATATTGATTTTAGT+TGG + Chr3:90548520-90548539 MsG0380017003.01.T01:intron 20.0%
!!! GATATTCATTTATTGACTAT+AGG + Chr3:90543742-90543761 MsG0380017003.01.T01:intron 20.0%
!!! GGGCTTTATATTTTATTTTA+GGG - Chr3:90542967-90542986 None:intergenic 20.0%
!!! GGTAATTTTGGAAAAAAATA+GGG + Chr3:90540740-90540759 MsG0380017003.01.T01:intron 20.0%
!!! GTTTTGTTTGGATTAATTTT+TGG + Chr3:90544145-90544164 MsG0380017003.01.T01:intron 20.0%
!!! GTTTTTGAAAAATTGAAATG+TGG + Chr3:90544506-90544525 MsG0380017003.01.T01:intron 20.0%
!!! TAAGCAAAAATCTACTTTTT+AGG - Chr3:90548717-90548736 None:intergenic 20.0%
!!! TAATTTTTAATGGATGGATT+CGG + Chr3:90540068-90540087 MsG0380017003.01.T01:intron 20.0%
!!! TATCTAGGCTTATAATTTTA+GGG + Chr3:90545164-90545183 MsG0380017003.01.T01:intron 20.0%
!!! TATTTTTTAAGCTTTTGATG+TGG - Chr3:90540495-90540514 None:intergenic 20.0%
!!! TCTCGTTTTTTTTTGTTTTA+GGG + Chr3:90547288-90547307 MsG0380017003.01.T01:intron 20.0%
!!! TCTCTATCAATTTTTATTAG+AGG + Chr3:90545960-90545979 MsG0380017003.01.T01:intron 20.0%
!!! TCTTTTGTAATATATGTTTC+TGG + Chr3:90545625-90545644 MsG0380017003.01.T01:intron 20.0%
!!! TGTCTTTTAATTGGAAAAAA+TGG + Chr3:90547550-90547569 MsG0380017003.01.T01:intron 20.0%
!!! TTATTTTATTTCATAAACGC+TGG + Chr3:90545525-90545544 MsG0380017003.01.T01:intron 20.0%
!!! TTTTAACATCTCTAGATTAT+GGG + Chr3:90541905-90541924 MsG0380017003.01.T01:intron 20.0%
!!! TTTTAAGTTTTCTATTGTTG+TGG - Chr3:90540664-90540683 None:intergenic 20.0%
!!! TTTTATTGACGAAGAAAATT+GGG - Chr3:90539529-90539548 None:intergenic 20.0%
!!! TTTTCCCATATCATTAATAA+AGG + Chr3:90542343-90542362 MsG0380017003.01.T01:intron 20.0%
!!! TTTTTAACATCTCTAGATTA+TGG + Chr3:90541904-90541923 MsG0380017003.01.T01:intron 20.0%
!!! TTTTTATTGACGAAGAAAAT+TGG - Chr3:90539530-90539549 None:intergenic 20.0%
!!! TTTTTGCTTTTATTTTCTAC+AGG + Chr3:90547210-90547229 MsG0380017003.01.T01:intron 20.0%
!!! TTTTTGTTTGTCTCTTTATT+AGG + Chr3:90543791-90543810 MsG0380017003.01.T01:intron 20.0%
!!! TTTTTTAATTGGTTTAGAAC+CGG + Chr3:90549188-90549207 MsG0380017003.01.T01:intron 20.0%
! AAAAAATATCAATGCTTGGT+TGG + Chr3:90540507-90540526 MsG0380017003.01.T01:intron 25.0%
! AAAAAATGGAATCTCTATGA+AGG + Chr3:90547564-90547583 MsG0380017003.01.T01:intron 25.0%
! AAAAATGGAATCTCTATGAA+GGG + Chr3:90547565-90547584 MsG0380017003.01.T01:intron 25.0%
! AAAATAAAAGCTATTTGCAG+CGG + Chr3:90541712-90541731 MsG0380017003.01.T01:intron 25.0%
! AAAGGGACAAAAAGAAAATT+TGG + Chr3:90543716-90543735 MsG0380017003.01.T01:CDS 25.0%
! AAAGTATGTTCCTATCTTAA+AGG - Chr3:90547983-90548002 None:intergenic 25.0%
! AACAATAGAGTCATTTAAAC+TGG - Chr3:90544185-90544204 None:intergenic 25.0%
! AACCTAGTATCTTATAAAAC+AGG + Chr3:90550966-90550985 MsG0380017003.01.T01:intron 25.0%
! AACTAAATAATACCCAACAA+CGG - Chr3:90548086-90548105 None:intergenic 25.0%
! AAGAAAATAATCCAATTACC+TGG - Chr3:90544946-90544965 None:intergenic 25.0%
! AAGAAGCTAAAAGAATGAAA+AGG - Chr3:90542324-90542343 None:intergenic 25.0%
! AAGCAAAAAGGTTTAACAAA+TGG - Chr3:90547199-90547218 None:intergenic 25.0%
! AATAAAATATAAAGCCCCTT+TGG + Chr3:90542970-90542989 MsG0380017003.01.T01:intron 25.0%
! AATACTCATAGAAAACTCAA+TGG + Chr3:90541176-90541195 MsG0380017003.01.T01:intron 25.0%
! AATCAACAAATTCCTTCATA+TGG - Chr3:90540047-90540066 None:intergenic 25.0%
! AATTCAAATCATAAGGTGAA+GGG + Chr3:90550540-90550559 MsG0380017003.01.T01:intron 25.0%
! ACAATAGAGTCATTTAAACT+GGG - Chr3:90544184-90544203 None:intergenic 25.0%
! ACAATTTATATGCAATTGAC+AGG + Chr3:90546779-90546798 MsG0380017003.01.T01:intron 25.0%
! ACATGCTTAATATATGAAGT+GGG + Chr3:90546165-90546184 MsG0380017003.01.T01:intron 25.0%
! AGAAATTTGACTGTAAATTG+TGG + Chr3:90551041-90551060 MsG0380017003.01.T01:exon 25.0%
! AGATACGCTAGATATAAAAT+TGG + Chr3:90545829-90545848 MsG0380017003.01.T01:intron 25.0%
! AGATTGTTAGTTACAACTAT+AGG + Chr3:90546132-90546151 MsG0380017003.01.T01:intron 25.0%
! ATATCAAATATGTGAATCAC+AGG - Chr3:90548290-90548309 None:intergenic 25.0%
! ATCAAATTGCAGTTCAAATT+AGG + Chr3:90549290-90549309 MsG0380017003.01.T01:intron 25.0%
! ATGTATGTAGTCTTTATTCT+AGG - Chr3:90548679-90548698 None:intergenic 25.0%
! ATTAGAAAGAATAAGGAAAC+CGG - Chr3:90549210-90549229 None:intergenic 25.0%
! ATTAGAGACATTGTATATGT+AGG + Chr3:90542691-90542710 MsG0380017003.01.T01:intron 25.0%
! ATTATTGGTATTAATCGAAG+TGG + Chr3:90539993-90540012 MsG0380017003.01.T01:intron 25.0%
! CAAAATAAAGCTATTTGTAG+TGG + Chr3:90541771-90541790 MsG0380017003.01.T01:intron 25.0%
! CAAGAACATGAATAACAAAA+GGG - Chr3:90547872-90547891 None:intergenic 25.0%
! CACAAATATCAGTTACAAAT+TGG + Chr3:90546659-90546678 MsG0380017003.01.T01:CDS 25.0%
! CGATAGTAAAAGAACATAAA+TGG + Chr3:90541872-90541891 MsG0380017003.01.T01:intron 25.0%
! CTGATGATCTACAAAATAAT+AGG - Chr3:90546519-90546538 None:intergenic 25.0%
! CTTATAAGAACAATCTTACT+AGG - Chr3:90543867-90543886 None:intergenic 25.0%
! GAATACACTCTATTTAGATT+AGG + Chr3:90549952-90549971 MsG0380017003.01.T01:intron 25.0%
! GACTTATAATAAAATCCAGA+GGG + Chr3:90542495-90542514 MsG0380017003.01.T01:intron 25.0%
! GATACGCTAGATATAAAATT+GGG + Chr3:90545830-90545849 MsG0380017003.01.T01:intron 25.0%
! GATTGGTAAACTTTATAAGT+TGG - Chr3:90545196-90545215 None:intergenic 25.0%
! GCAAGCATATTATATGATAT+GGG - Chr3:90546026-90546045 None:intergenic 25.0%
! GCTTAAAAAATATCAATGCT+TGG + Chr3:90540503-90540522 MsG0380017003.01.T01:intron 25.0%
! GTGAAAGAATACTATATGAT+AGG - Chr3:90539284-90539303 None:intergenic 25.0%
! TAATTTCAAAACCAGTAAAC+TGG + Chr3:90549156-90549175 MsG0380017003.01.T01:intron 25.0%
! TACATGCTTAATATATGAAG+TGG + Chr3:90546164-90546183 MsG0380017003.01.T01:intron 25.0%
! TACTTATTTATCTTGCAGTT+CGG + Chr3:90541569-90541588 MsG0380017003.01.T01:intron 25.0%
! TATAAAAGAAAGTTGTAGCT+AGG + Chr3:90545418-90545437 MsG0380017003.01.T01:intron 25.0%
! TATAGTTGTAACTAACAATC+TGG - Chr3:90546133-90546152 None:intergenic 25.0%
! TATTTGATATTAGATTGAGG+CGG + Chr3:90548153-90548172 MsG0380017003.01.T01:CDS 25.0%
! TCATTCTGGATTATAAAATC+CGG + Chr3:90540706-90540725 MsG0380017003.01.T01:intron 25.0%
! TGAATCTGTAATAAAGAATG+TGG + Chr3:90539358-90539377 MsG0380017003.01.T01:intron 25.0%
! TGCAAGCATATTATATGATA+TGG - Chr3:90546027-90546046 None:intergenic 25.0%
! TGTAATTTAGAAATCATAGG+AGG - Chr3:90550645-90550664 None:intergenic 25.0%
! TGTTGATGTTGTATTAATGT+CGG + Chr3:90544387-90544406 MsG0380017003.01.T01:intron 25.0%
! TTAGAGACATTGTATATGTA+GGG + Chr3:90542692-90542711 MsG0380017003.01.T01:intron 25.0%
! TTCTATTCTACATTGAATTC+AGG + Chr3:90547947-90547966 MsG0380017003.01.T01:intron 25.0%
! TTTATTGACGAAGAAAATTG+GGG - Chr3:90539528-90539547 None:intergenic 25.0%
!! AAAGTCCATCAATTTTTGAT+GGG - Chr3:90550036-90550055 None:intergenic 25.0%
!! AAATGGTTGAGATATTTTGT+TGG + Chr3:90540314-90540333 MsG0380017003.01.T01:intron 25.0%
!! AATGGTTGAGATATTTTGTT+GGG + Chr3:90540315-90540334 MsG0380017003.01.T01:intron 25.0%
!! ACAATTCGGATTTTATAATC+CGG + Chr3:90540218-90540237 MsG0380017003.01.T01:intron 25.0%
!! ATCCTGTTTTATAAGATACT+AGG - Chr3:90550971-90550990 None:intergenic 25.0%
!! ATGGATTAAATTGTATTCGT+GGG + Chr3:90539419-90539438 MsG0380017003.01.T01:intron 25.0%
!! ATGTTGCATCAAATTTTTGT+AGG + Chr3:90548498-90548517 MsG0380017003.01.T01:intron 25.0%
!! ATTGAGTTTTCTATGAGTAT+TGG - Chr3:90541177-90541196 None:intergenic 25.0%
!! ATTGATAATTCCCTTAACAT+GGG - Chr3:90546835-90546854 None:intergenic 25.0%
!! GAAAATAGAGAAAGCATAAA+AGG - Chr3:90551669-90551688 None:intergenic 25.0%
!! GCTTTGAATTGCATAAAAAA+TGG + Chr3:90540297-90540316 MsG0380017003.01.T01:intron 25.0%
!! TATGGATTAACCAAGAAAAT+AGG - Chr3:90540029-90540048 None:intergenic 25.0%
!! TTTATTTGGAACGGTAAATT+AGG + Chr3:90548594-90548613 MsG0380017003.01.T01:intron 25.0%
!! TTTCATCTTTTACATACTGA+AGG - Chr3:90539483-90539502 None:intergenic 25.0%
!! TTTTTCCAATTAAAAGACAC+AGG - Chr3:90547549-90547568 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + Chr3:90548727-90548746 MsG0380017003.01.T01:intron 25.0%
!!! AAAACAGGATGATGTTTTTT+TGG + Chr3:90550981-90551000 MsG0380017003.01.T01:intron 25.0%
!!! ATGTAGTTGTCTTTTTTATG+CGG + Chr3:90547698-90547717 MsG0380017003.01.T01:intron 25.0%
!!! CTACAAATAGCTTTATTTTG+AGG - Chr3:90541771-90541790 None:intergenic 25.0%
!!! CTCAGTAAGAATGTTTTTAT+AGG + Chr3:90544209-90544228 MsG0380017003.01.T01:intron 25.0%
!!! GGGGCTTTATATTTTATTTT+AGG - Chr3:90542968-90542987 None:intergenic 25.0%
!!! GGGTAATTTTGGAAAAAAAT+AGG + Chr3:90540739-90540758 MsG0380017003.01.T01:intron 25.0%
!!! GGTGAACCTTTTTTTTTAAT+TGG + Chr3:90549177-90549196 MsG0380017003.01.T01:intron 25.0%
!!! GTATTTTTGGAATTTTTGCA+GGG - Chr3:90539617-90539636 None:intergenic 25.0%
!!! GTCTCGTTTTTTTTTGTTTT+AGG + Chr3:90547287-90547306 MsG0380017003.01.T01:intron 25.0%
!!! TAACTACTTTTCTTTCTATC+AGG + Chr3:90548108-90548127 MsG0380017003.01.T01:intron 25.0%
!!! TCTATAGATTAGGTTTTGTT+TGG + Chr3:90544133-90544152 MsG0380017003.01.T01:intron 25.0%
!!! TCTCTTTATTAGGTTTTGTT+TGG + Chr3:90543801-90543820 MsG0380017003.01.T01:intron 25.0%
!!! TGGATTTAGGTTTCTTTTAT+TGG + Chr3:90546738-90546757 MsG0380017003.01.T01:intron 25.0%
!!! TTACTTCTTTTTCAGAACAT+AGG + Chr3:90548776-90548795 MsG0380017003.01.T01:intron 25.0%
!!! TTGGAACTTTGAAATTTTGT+GGG + Chr3:90548539-90548558 MsG0380017003.01.T01:intron 25.0%
!!! TTGTTTCTGGAAAAAAGTAT+TGG - Chr3:90540277-90540296 None:intergenic 25.0%
!!! TTTGCTCTGAAAATGTTATT+TGG + Chr3:90551394-90551413 MsG0380017003.01.T01:three_prime_UTR 25.0%
!!! TTTGTCCAGATTTTAAAATC+CGG - Chr3:90539655-90539674 None:intergenic 25.0%
!!! TTTTTTCTTATATTGCGGTT+TGG - Chr3:90541127-90541146 None:intergenic 25.0%
!!! TTTTTTTCCAAAATTACCCT+CGG - Chr3:90540738-90540757 None:intergenic 25.0%
!!! TTTTTTTTACACGAATTGAG+AGG + Chr3:90551220-90551239 MsG0380017003.01.T01:three_prime_UTR 25.0%
AAAAGATTCAGAATCCAAAC+TGG + Chr3:90543391-90543410 MsG0380017003.01.T01:CDS 30.0%
AAATAGAGTGTATTCCACTT+TGG - Chr3:90549947-90549966 None:intergenic 30.0%
AACGAATTACCTAGTTAAGT+AGG - Chr3:90544326-90544345 None:intergenic 30.0%
AAGAAATGTATGAGATGACA+CGG - Chr3:90546328-90546347 None:intergenic 30.0%
AAGAGAATGTGAAAGATTTG+TGG - Chr3:90550284-90550303 None:intergenic 30.0%
AAGAGATATTCATACAACAG+AGG - Chr3:90545329-90545348 None:intergenic 30.0%
AATAACAACACTAAACAAGG+AGG - Chr3:90551691-90551710 None:intergenic 30.0%
AATATTCAGAAACAAGGGTT+TGG - Chr3:90543294-90543313 None:intergenic 30.0%
AATTTCTCGATCAACTTCAT+AGG - Chr3:90551028-90551047 None:intergenic 30.0%
ACAAATCTTTCACATTCTCT+TGG + Chr3:90550283-90550302 MsG0380017003.01.T01:intron 30.0%
ACCAATAATCAATCTTCTAG+TGG - Chr3:90539982-90540001 None:intergenic 30.0%
ACGAATTACCTAGTTAAGTA+GGG - Chr3:90544325-90544344 None:intergenic 30.0%
ACTCTATTTAGATTAGGCAA+GGG + Chr3:90549958-90549977 MsG0380017003.01.T01:intron 30.0%
ACTGAATATTGACAAACTGA+AGG + Chr3:90548931-90548950 MsG0380017003.01.T01:CDS 30.0%
ACTTGTTTATGGTTCAAACA+GGG + Chr3:90547150-90547169 MsG0380017003.01.T01:CDS 30.0%
AGAATTGAAAAAGACATTGG+CGG + Chr3:90543022-90543041 MsG0380017003.01.T01:intron 30.0%
AGAGAATGTGAAAGATTTGT+GGG - Chr3:90550283-90550302 None:intergenic 30.0%
AGATAAATAAGTATGCGGTT+TGG - Chr3:90541562-90541581 None:intergenic 30.0%
AGCATATTATATGATATGGG+AGG - Chr3:90546023-90546042 None:intergenic 30.0%
ATAACTAACCCTACTTAACT+AGG + Chr3:90544314-90544333 MsG0380017003.01.T01:intron 30.0%
ATAGATCAGCAAAATGTTGA+AGG + Chr3:90543686-90543705 MsG0380017003.01.T01:CDS 30.0%
ATATCATCTGATCTCAACAT+TGG + Chr3:90548407-90548426 MsG0380017003.01.T01:CDS 30.0%
ATCAAGGAACTATTCTCAAT+CGG - Chr3:90550255-90550274 None:intergenic 30.0%
ATCCAAGCTAATTTCATTGA+CGG + Chr3:90550819-90550838 MsG0380017003.01.T01:intron 30.0%
ATGAATTAGATTATGTGGGT+GGG - Chr3:90546481-90546500 None:intergenic 30.0%
ATGGTTCAAAAGTTTAGGTA+AGG + Chr3:90539137-90539156 MsG0380017003.01.T01:CDS 30.0%
ATTCAAATCATAAGGTGAAG+GGG + Chr3:90550541-90550560 MsG0380017003.01.T01:intron 30.0%
CAGTAAAAATTCCATTAGAG+AGG - Chr3:90551485-90551504 None:intergenic 30.0%
CATGTTAAGGGAATTATCAA+TGG + Chr3:90546834-90546853 MsG0380017003.01.T01:CDS 30.0%
CCAAGAACATGAATAACAAA+AGG - Chr3:90547873-90547892 None:intergenic 30.0%
CGACTTATAATAAAATCCAG+AGG + Chr3:90542494-90542513 MsG0380017003.01.T01:intron 30.0%
CGCATTAGAAAAACGATAAA+TGG + Chr3:90542577-90542596 MsG0380017003.01.T01:intron 30.0%
CTAGATATAAAATTGGGAAC+GGG + Chr3:90545836-90545855 MsG0380017003.01.T01:intron 30.0%
CTATATGATAGGAATGTGAT+CGG - Chr3:90539273-90539292 None:intergenic 30.0%
CTGCAAGATAAATAAGTATG+CGG - Chr3:90541567-90541586 None:intergenic 30.0%
GAATTCAAATCATAAGGTGA+AGG + Chr3:90550539-90550558 MsG0380017003.01.T01:intron 30.0%
GAGGTCAAATGTTATTAACA+GGG + Chr3:90545099-90545118 MsG0380017003.01.T01:intron 30.0%
GATGATATAGATATGAGAAG+AGG - Chr3:90548395-90548414 None:intergenic 30.0%
GATGGTCTTTATATAACATC+TGG + Chr3:90548254-90548273 MsG0380017003.01.T01:CDS 30.0%
GATGTTATATAAAGACCATC+AGG - Chr3:90548254-90548273 None:intergenic 30.0%
GCATATTATATGATATGGGA+GGG - Chr3:90546022-90546041 None:intergenic 30.0%
GCTAGATATAAAATTGGGAA+CGG + Chr3:90545835-90545854 MsG0380017003.01.T01:intron 30.0%
GGAATAAAATTAAAGGGGTA+TGG + Chr3:90546680-90546699 MsG0380017003.01.T01:intron 30.0%
GTATTAAAGGAATCAATTCC+TGG - Chr3:90544806-90544825 None:intergenic 30.0%
GTTATTGTTCAAACCACTAA+AGG - Chr3:90545589-90545608 None:intergenic 30.0%
GTTTAAATTTCTGCAATCCA+TGG - Chr3:90547241-90547260 None:intergenic 30.0%
TAAAGGATCATGTACAGTTA+AGG + Chr3:90550713-90550732 MsG0380017003.01.T01:intron 30.0%
TAAATTTGGTCTACGTAGTT+GGG + Chr3:90541356-90541375 MsG0380017003.01.T01:intron 30.0%
TAATCCGGAATGTGATTATA+TGG + Chr3:90540233-90540252 MsG0380017003.01.T01:intron 30.0%
TACACATGGTTCAAAAGTTT+AGG + Chr3:90539132-90539151 MsG0380017003.01.T01:CDS 30.0%
TAGATATAAAATTGGGAACG+GGG + Chr3:90545837-90545856 MsG0380017003.01.T01:intron 30.0%
TAGATCAGCAAAATGTTGAA+GGG + Chr3:90543687-90543706 MsG0380017003.01.T01:CDS 30.0%
TATCATCTGATCTCAACATT+GGG + Chr3:90548408-90548427 MsG0380017003.01.T01:CDS 30.0%
TATGAATTAGATTATGTGGG+TGG - Chr3:90546482-90546501 None:intergenic 30.0%
TATTACAGATTCAACAAGCT+AGG - Chr3:90539351-90539370 None:intergenic 30.0%
TCAAATTAATTACGAGTCGA+GGG + Chr3:90540862-90540881 MsG0380017003.01.T01:intron 30.0%
TCAATATTCAGTTTCTCAAC+TGG - Chr3:90548923-90548942 None:intergenic 30.0%
TCATCATGAAGATGATTGAA+GGG + Chr3:90540625-90540644 MsG0380017003.01.T01:intron 30.0%
TCCACTAGAAGATTGATTAT+TGG + Chr3:90539978-90539997 MsG0380017003.01.T01:intron 30.0%
TCCATGTATAGAAAAGGAAA+AGG - Chr3:90547659-90547678 None:intergenic 30.0%
TGAAGGTAAAATAGTGTTTC+TGG + Chr3:90550902-90550921 MsG0380017003.01.T01:intron 30.0%
TGATCTACAAAATAATAGGC+AGG - Chr3:90546515-90546534 None:intergenic 30.0%
TGGCTCTTTGTATATTTACT+TGG + Chr3:90544617-90544636 MsG0380017003.01.T01:intron 30.0%
TTAAATTTGGTCTACGTAGT+TGG + Chr3:90541355-90541374 MsG0380017003.01.T01:intron 30.0%
TTATGTACTACTTGAACTCT+TGG + Chr3:90541269-90541288 MsG0380017003.01.T01:intron 30.0%
TTCATCATGAAGATGATTGA+AGG + Chr3:90540624-90540643 MsG0380017003.01.T01:intron 30.0%
TTCTTATAATATACACCCTC+CGG - Chr3:90548749-90548768 None:intergenic 30.0%
TTCTTCTGCCTTATAAACAT+GGG + Chr3:90547736-90547755 MsG0380017003.01.T01:intron 30.0%
TTCTTGGTTAATCCATATGA+AGG + Chr3:90540032-90540051 MsG0380017003.01.T01:intron 30.0%
TTTCTTCTGCCTTATAAACA+TGG + Chr3:90547735-90547754 MsG0380017003.01.T01:intron 30.0%
TTTGTCAAGAAAAGAGAGAT+AGG + Chr3:90548001-90548020 MsG0380017003.01.T01:intron 30.0%
! AAACTTTTGAACCATGTGTA+GGG - Chr3:90539132-90539151 None:intergenic 30.0%
! AACTCAGATGATGATGATAA+TGG + Chr3:90543449-90543468 MsG0380017003.01.T01:CDS 30.0%
! AACTTGTTTATGGTTCAAAC+AGG + Chr3:90547149-90547168 MsG0380017003.01.T01:CDS 30.0%
! AAGTCTCATTCCTATTTTCT+TGG + Chr3:90540016-90540035 MsG0380017003.01.T01:intron 30.0%
! AATGGAAGTTTTTACCGTTT+TGG + Chr3:90545250-90545269 MsG0380017003.01.T01:intron 30.0%
! ACGCCTTATTAGAAAGAATA+AGG - Chr3:90549217-90549236 None:intergenic 30.0%
! ACTATTTTACCTTCATGGTA+AGG - Chr3:90550897-90550916 None:intergenic 30.0%
! ACTCGTAATTAATTTGAGAG+CGG - Chr3:90540859-90540878 None:intergenic 30.0%
! AGAATATTTGGGTTTGATGT+TGG + Chr3:90547053-90547072 MsG0380017003.01.T01:CDS 30.0%
! ATTCTGGAAAAACATCATTC+TGG + Chr3:90540692-90540711 MsG0380017003.01.T01:intron 30.0%
! CATTGATAATTCCCTTAACA+TGG - Chr3:90546836-90546855 None:intergenic 30.0%
! CTCTCTAATGGAATTTTTAC+TGG + Chr3:90551483-90551502 MsG0380017003.01.T01:three_prime_UTR 30.0%
! CTGAAAAGTTTTTCACCAAA+GGG - Chr3:90542988-90543007 None:intergenic 30.0%
! GAAAACTGTTTTCAACAGAT+TGG - Chr3:90549769-90549788 None:intergenic 30.0%
! GAAACACTATTTTACCTTCA+TGG - Chr3:90550902-90550921 None:intergenic 30.0%
! GAAAGTCCATCAATTTTTGA+TGG - Chr3:90550037-90550056 None:intergenic 30.0%
! GAAGAAAATGACCTGATTTT+TGG - Chr3:90543261-90543280 None:intergenic 30.0%
! GAATTTGATGGTTTACTAGT+TGG + Chr3:90539862-90539881 MsG0380017003.01.T01:intron 30.0%
! GTTCTTAATTTGAGAGCAAT+GGG - Chr3:90540907-90540926 None:intergenic 30.0%
! GTTTTCTATTGTTGTGGAAT+TGG - Chr3:90540658-90540677 None:intergenic 30.0%
! TAAACTTTTGAACCATGTGT+AGG - Chr3:90539133-90539152 None:intergenic 30.0%
! TCAATGAAATTAGCTTGGAT+TGG - Chr3:90550819-90550838 None:intergenic 30.0%
! TCATTGTAGAGTATTCTAAC+TGG + Chr3:90549030-90549049 MsG0380017003.01.T01:intron 30.0%
! TCCTTTTCCTTTTCTATACA+TGG + Chr3:90547655-90547674 MsG0380017003.01.T01:intron 30.0%
! TCGTCAATAAAAAGCATGAT+GGG + Chr3:90539537-90539556 MsG0380017003.01.T01:intron 30.0%
! TGAAAAGTTTTTCACCAAAG+GGG - Chr3:90542987-90543006 None:intergenic 30.0%
! TGAGCTTTTATAGATTGTGA+CGG - Chr3:90548332-90548351 None:intergenic 30.0%
! TTATATAACATCTGGTTCAG+CGG + Chr3:90548262-90548281 MsG0380017003.01.T01:CDS 30.0%
! TTCGTCAATAAAAAGCATGA+TGG + Chr3:90539536-90539555 MsG0380017003.01.T01:intron 30.0%
! TTGATAATTCCCTTAACATG+GGG - Chr3:90546834-90546853 None:intergenic 30.0%
! TTGTGTTTGAAGCATTTGAA+AGG + Chr3:90551194-90551213 MsG0380017003.01.T01:three_prime_UTR 30.0%
! TTGTTATTCATGTTCTTGGT+TGG + Chr3:90547874-90547893 MsG0380017003.01.T01:intron 30.0%
! TTTTATTAGAGGAATACCCT+AGG + Chr3:90545971-90545990 MsG0380017003.01.T01:intron 30.0%
! TTTTGTATGCAACATCCTTA+TGG + Chr3:90547601-90547620 MsG0380017003.01.T01:intron 30.0%
! TTTTTATGCGGATGACATTT+GGG + Chr3:90547710-90547729 MsG0380017003.01.T01:intron 30.0%
! TTTTTGCCTGCGTTTAAATT+TGG + Chr3:90541342-90541361 MsG0380017003.01.T01:intron 30.0%
!! AATTGTTCTAGAGAGTTCTA+AGG - Chr3:90546103-90546122 None:intergenic 30.0%
!! ATTGTTCTAGAGAGTTCTAA+GGG - Chr3:90546102-90546121 None:intergenic 30.0%
!! GATGGATTAAATTGTATTCG+TGG + Chr3:90539418-90539437 MsG0380017003.01.T01:intron 30.0%
!! GTATTTTGCAGCTTTGTATA+TGG + Chr3:90551452-90551471 MsG0380017003.01.T01:three_prime_UTR 30.0%
!! TTGTTTTGCCCATGTTTATA+AGG - Chr3:90547747-90547766 None:intergenic 30.0%
!! TTTGATTTGAGGAAGAAGAT+GGG - Chr3:90539740-90539759 None:intergenic 30.0%
!!! AATGACCTGATTTTTGGTAT+AGG - Chr3:90543255-90543274 None:intergenic 30.0%
!!! AGGAAAATTTTGATTGGGAA+AGG + Chr3:90548614-90548633 MsG0380017003.01.T01:intron 30.0%
!!! AGGCTTATAATTTTAGGGTA+TGG + Chr3:90545169-90545188 MsG0380017003.01.T01:intron 30.0%
!!! CCTTTTGTTATTCATGTTCT+TGG + Chr3:90547870-90547889 MsG0380017003.01.T01:intron 30.0%
!!! GGCTTATAATTTTAGGGTAT+GGG + Chr3:90545170-90545189 MsG0380017003.01.T01:intron 30.0%
!!! GGTATTTTTGGAATTTTTGC+AGG - Chr3:90539618-90539637 None:intergenic 30.0%
!!! GGTTTTTGTTGTTTGTTAGT+TGG + Chr3:90539910-90539929 MsG0380017003.01.T01:intron 30.0%
!!! GGTTTTTTATTGGATTGGTT+CGG - Chr3:90540971-90540990 None:intergenic 30.0%
!!! GTTGGAACTTTGAAATTTTG+TGG + Chr3:90548538-90548557 MsG0380017003.01.T01:intron 30.0%
!!! TATTTTAGGGTCTTGTTAAC+CGG - Chr3:90542954-90542973 None:intergenic 30.0%
!!! TCTGATCATTGCTACTTTTT+AGG + Chr3:90545675-90545694 MsG0380017003.01.T01:intron 30.0%
!!! TTCTCTTTGGTTTTCATATC+CGG + Chr3:90544683-90544702 MsG0380017003.01.T01:intron 30.0%
!!! TTCTTTTTCAGAACATAGGA+TGG + Chr3:90548780-90548799 MsG0380017003.01.T01:intron 30.0%
!!! TTTGCGGTTTTTTATTGGAT+TGG - Chr3:90540976-90540995 None:intergenic 30.0%
!!! TTTTTTATGCGGATGACATT+TGG + Chr3:90547709-90547728 MsG0380017003.01.T01:intron 30.0%
AAAAAGATCTACCACTGTCA+AGG - Chr3:90551146-90551165 None:intergenic 35.0%
AAAAAGGTTCACCAGTTTAC+TGG - Chr3:90549170-90549189 None:intergenic 35.0%
AAACAGCAAAAAACCGCATT+TGG + Chr3:90541014-90541033 MsG0380017003.01.T01:intron 35.0%
AAAGCTTATCTGAACTGAAC+TGG + Chr3:90544597-90544616 MsG0380017003.01.T01:intron 35.0%
AACACTCACTGGTATAATGT+TGG + Chr3:90539098-90539117 MsG0380017003.01.T01:CDS 35.0%
AACCTTGGATACTTAGATAC+AGG - Chr3:90544657-90544676 None:intergenic 35.0%
AAGTAGCCATAACTCTATCA+CGG - Chr3:90539182-90539201 None:intergenic 35.0%
AAGTGGAAATAGGATCAACA+TGG - Chr3:90548039-90548058 None:intergenic 35.0%
AATCAACCTCTAATGAGAAG+CGG - Chr3:90542183-90542202 None:intergenic 35.0%
AATCCACACAAATGTCAATG+TGG - Chr3:90551596-90551615 None:intergenic 35.0%
AATGCTTGGATTATTGACAC+AGG - Chr3:90549476-90549495 None:intergenic 35.0%
AATGTTGAAGGGAAGGATAA+AGG + Chr3:90543698-90543717 MsG0380017003.01.T01:CDS 35.0%
ACAAAGCCTTTGTTAGAGAA+TGG - Chr3:90539775-90539794 None:intergenic 35.0%
ACAGAACACTTTACTTCATC+AGG - Chr3:90548442-90548461 None:intergenic 35.0%
ACAGGTGTGAGATAATAGAA+TGG - Chr3:90547531-90547550 None:intergenic 35.0%
ACATTGACATTTGTGTGGAT+TGG + Chr3:90551595-90551614 MsG0380017003.01.T01:three_prime_UTR 35.0%
ACCAAGAGTTCAACAAATCA+AGG - Chr3:90550226-90550245 None:intergenic 35.0%
ACCAATCAAGATAGAATGAG+AGG + Chr3:90545209-90545228 MsG0380017003.01.T01:intron 35.0%
ACCTATGAACTTCAGTGAAT+TGG + Chr3:90547444-90547463 MsG0380017003.01.T01:intron 35.0%
ACCTCTCATTCTATCTTGAT+TGG - Chr3:90545213-90545232 None:intergenic 35.0%
ACGGGGTGATTTACATATTT+CGG - Chr3:90540136-90540155 None:intergenic 35.0%
ACTAAAGAGTAGCAACAGTT+TGG - Chr3:90539806-90539825 None:intergenic 35.0%
ACTCTCGTCCTTATATTGAA+GGG - Chr3:90547816-90547835 None:intergenic 35.0%
ACTTTCAACAAATCGCAGAA+AGG - Chr3:90544980-90544999 None:intergenic 35.0%
AGAACGTGTGAAATTCTTAG+AGG + Chr3:90546803-90546822 MsG0380017003.01.T01:CDS 35.0%
AGGGTGAAAAATGATGTTTC+CGG + Chr3:90540171-90540190 MsG0380017003.01.T01:intron 35.0%
AGGTAAGGATAATGCTATTG+AGG + Chr3:90539152-90539171 MsG0380017003.01.T01:CDS 35.0%
ATAAAAATTTCCCTTCGTGC+GGG - Chr3:90550453-90550472 None:intergenic 35.0%
ATAGCAGAGGCAAAATTGTT+GGG - Chr3:90549660-90549679 None:intergenic 35.0%
ATATGTAGGGTTCGAACTTT+AGG + Chr3:90542705-90542724 MsG0380017003.01.T01:intron 35.0%
ATCACTCAGGTTCAACTAAA+AGG - Chr3:90550497-90550516 None:intergenic 35.0%
ATCTTTCACATTCTCTTGGT+AGG + Chr3:90550287-90550306 MsG0380017003.01.T01:intron 35.0%
ATGTTGAAGGGAAGGATAAA+GGG + Chr3:90543699-90543718 MsG0380017003.01.T01:CDS 35.0%
ATTCAGCACCAACAAAAAGA+TGG - Chr3:90548467-90548486 None:intergenic 35.0%
ATTCGTCAAATCTAGAGGAT+TGG - Chr3:90550383-90550402 None:intergenic 35.0%
CAAATTCCTTACTGTACTTG+TGG - Chr3:90550111-90550130 None:intergenic 35.0%
CAACAGTAAAAAGCCAATAC+CGG - Chr3:90544705-90544724 None:intergenic 35.0%
CAAGAATTAGCCACTAAAGA+TGG - Chr3:90549365-90549384 None:intergenic 35.0%
CAAGACCCATCAAAAATTGA+TGG + Chr3:90550028-90550047 MsG0380017003.01.T01:intron 35.0%
CACTCTATTTAGATTAGGCA+AGG + Chr3:90549957-90549976 MsG0380017003.01.T01:intron 35.0%
CAGAACACTTTACTTCATCA+GGG - Chr3:90548441-90548460 None:intergenic 35.0%
CAGAGAGTAGAAGTTGTTAA+AGG - Chr3:90546231-90546250 None:intergenic 35.0%
CCGTTGAAAGTCAACAAATA+GGG + Chr3:90540152-90540171 MsG0380017003.01.T01:intron 35.0%
CGAGGTCAAATGTTATTAAC+AGG + Chr3:90545098-90545117 MsG0380017003.01.T01:intron 35.0%
CGGCAATAGAAGAAAAATCT+TGG - Chr3:90548066-90548085 None:intergenic 35.0%
CTACAAAATAATAGGCAGGA+TGG - Chr3:90546511-90546530 None:intergenic 35.0%
CTCAAATTAATTACGAGTCG+AGG + Chr3:90540861-90540880 MsG0380017003.01.T01:intron 35.0%
GAAATAAGTACTCCAACACT+AGG - Chr3:90540359-90540378 None:intergenic 35.0%
GAAATATTAGGATGTCCTGT+TGG - Chr3:90549404-90549423 None:intergenic 35.0%
GAACGTTCATTCCTATCAAT+TGG - Chr3:90543512-90543531 None:intergenic 35.0%
GAACTATTCTCAATCGGTAA+TGG - Chr3:90550249-90550268 None:intergenic 35.0%
GAGAATGCAAGTGTGATATT+GGG - Chr3:90550089-90550108 None:intergenic 35.0%
GATAAAAATTTCCCTTCGTG+CGG - Chr3:90550454-90550473 None:intergenic 35.0%
GATCGAATAGTCCAATTGAT+AGG + Chr3:90543498-90543517 MsG0380017003.01.T01:CDS 35.0%
GATGAACTCTTGCGTATTAA+AGG - Chr3:90544819-90544838 None:intergenic 35.0%
GCACATTCCATGTATAGAAA+AGG - Chr3:90547665-90547684 None:intergenic 35.0%
GCTTAATATATGAAGTGGGA+GGG + Chr3:90546169-90546188 MsG0380017003.01.T01:intron 35.0%
GGAAGAAATTGGAAGAGAAA+AGG - Chr3:90539718-90539737 None:intergenic 35.0%
GGACAAAATCGATATGACAA+GGG + Chr3:90539668-90539687 MsG0380017003.01.T01:intron 35.0%
GGTGGTACTAAAGAATTTGA+TGG + Chr3:90539850-90539869 MsG0380017003.01.T01:intron 35.0%
GTTTCTCAACTGGAATGTAA+AGG - Chr3:90548913-90548932 None:intergenic 35.0%
TAAAGAATGTGGTGTGACAT+AGG + Chr3:90539369-90539388 MsG0380017003.01.T01:intron 35.0%
TACAATTCAAAACGAGTCGA+GGG + Chr3:90540810-90540829 MsG0380017003.01.T01:intron 35.0%
TACGTAGTTGGGAATATTGT+TGG + Chr3:90541367-90541386 MsG0380017003.01.T01:intron 35.0%
TACTCTCGTCCTTATATTGA+AGG - Chr3:90547817-90547836 None:intergenic 35.0%
TATCTCGAGGAAAGGAAAAA+CGG - Chr3:90549900-90549919 None:intergenic 35.0%
TATGAATGGAGAGATCGTTA+GGG + Chr3:90548826-90548845 MsG0380017003.01.T01:CDS 35.0%
TATGCCCTGATTTATCTTTC+TGG + Chr3:90545754-90545773 MsG0380017003.01.T01:intron 35.0%
TCAACAAATCAAGGCAGAAT+TGG - Chr3:90550217-90550236 None:intergenic 35.0%
TCAATGATGTCCAAATCCAA+GGG + Chr3:90551331-90551350 MsG0380017003.01.T01:three_prime_UTR 35.0%
TCACTGGTATAATGTTGGAA+GGG + Chr3:90539103-90539122 MsG0380017003.01.T01:CDS 35.0%
TCAGTATATACTGCTGATAG+TGG + Chr3:90546631-90546650 MsG0380017003.01.T01:CDS 35.0%
TCATAGGTAACTTGAGCAAT+TGG - Chr3:90547432-90547451 None:intergenic 35.0%
TCCAATTCACTGAAGTTCAT+AGG - Chr3:90547448-90547467 None:intergenic 35.0%
TCCGGAATGTGTAAAATATC+CGG - Chr3:90540104-90540123 None:intergenic 35.0%
TCCTCCATATAATCACATTC+CGG - Chr3:90540240-90540259 None:intergenic 35.0%
TCTCAGTTAGATCAGTTTAC+CGG + Chr3:90551117-90551136 MsG0380017003.01.T01:three_prime_UTR 35.0%
TCTTCTGTTCGACTTATGAA+TGG + Chr3:90548812-90548831 MsG0380017003.01.T01:CDS 35.0%
TCTTGCCTATACCAAAAATC+AGG + Chr3:90543247-90543266 MsG0380017003.01.T01:intron 35.0%
TGAATTCAAATGACAACCCA+GGG - Chr3:90550526-90550545 None:intergenic 35.0%
TGACAGGTAAACAAAATGCT+TGG - Chr3:90549490-90549509 None:intergenic 35.0%
TGAGTAGATTCAACACTCTT+AGG + Chr3:90539889-90539908 MsG0380017003.01.T01:intron 35.0%
TGCTTAATATATGAAGTGGG+AGG + Chr3:90546168-90546187 MsG0380017003.01.T01:intron 35.0%
TGGAATGTAAAACTCTTGTG+TGG - Chr3:90549434-90549453 None:intergenic 35.0%
TGGAATGTGCTTGAAATAGT+AGG + Chr3:90547675-90547694 MsG0380017003.01.T01:intron 35.0%
TGGACAAAATCGATATGACA+AGG + Chr3:90539667-90539686 MsG0380017003.01.T01:intron 35.0%
TGGATTCGGATTACATAATC+CGG + Chr3:90540082-90540101 MsG0380017003.01.T01:intron 35.0%
TGTTGGGAAGAATAAATCCT+TGG + Chr3:90540331-90540350 MsG0380017003.01.T01:intron 35.0%
TGTTTCCGGATTACATAATC+CGG + Chr3:90540185-90540204 MsG0380017003.01.T01:intron 35.0%
TGTTTGCCATTCTCTAACAA+AGG + Chr3:90539766-90539785 MsG0380017003.01.T01:intron 35.0%
TTACAATTCAAAACGAGTCG+AGG + Chr3:90540809-90540828 MsG0380017003.01.T01:intron 35.0%
TTACTGTTGTCTTTGTCTCA+AGG + Chr3:90544716-90544735 MsG0380017003.01.T01:intron 35.0%
TTATGAATGGAGAGATCGTT+AGG + Chr3:90548825-90548844 MsG0380017003.01.T01:CDS 35.0%
TTGAATTCAAATGACAACCC+AGG - Chr3:90550527-90550546 None:intergenic 35.0%
TTGTTAGAGAATGGCAAACA+GGG - Chr3:90539766-90539785 None:intergenic 35.0%
TTTCTTCTATTGCCGTTGTT+GGG + Chr3:90548071-90548090 MsG0380017003.01.T01:intron 35.0%
TTTGGAGAACTTAAAAGGTG+AGG - Chr3:90551516-90551535 None:intergenic 35.0%
TTTGTTAGAGAATGGCAAAC+AGG - Chr3:90539767-90539786 None:intergenic 35.0%
! AACAATTTTGCCTCTGCTAT+GGG + Chr3:90549660-90549679 MsG0380017003.01.T01:intron 35.0%
! AACAGATTGGTTATCCTGAA+TGG - Chr3:90549756-90549775 None:intergenic 35.0%
! AAGGAACGAGTCGTAATTTT+TGG - Chr3:90550878-90550897 None:intergenic 35.0%
! ATAAACAAGTTGAAGTCGAC+CGG - Chr3:90547140-90547159 None:intergenic 35.0%
! CCTGAAAAGTTTTTCACCAA+AGG - Chr3:90542989-90543008 None:intergenic 35.0%
! CCTTTGGTGAAAAACTTTTC+AGG + Chr3:90542986-90543005 MsG0380017003.01.T01:intron 35.0%
! GAAGACACATGTTTTGTAAC+TGG + Chr3:90546876-90546895 MsG0380017003.01.T01:CDS 35.0%
! GAGAGTATGTTCAATTGTTG+TGG + Chr3:90547830-90547849 MsG0380017003.01.T01:intron 35.0%
! GGTTCTTAATTTGAGAGCAA+TGG - Chr3:90540908-90540927 None:intergenic 35.0%
! GTAATTAATTTGAGAGCGGT+GGG - Chr3:90540855-90540874 None:intergenic 35.0%
! GTAGAGTATTCTAACTGGAA+TGG + Chr3:90549035-90549054 MsG0380017003.01.T01:intron 35.0%
! GTTGTCGTTACAATTGGTTT+CGG - Chr3:90541658-90541677 None:intergenic 35.0%
! GTTTTACATTCCATGTCATG+TGG + Chr3:90549441-90549460 MsG0380017003.01.T01:intron 35.0%
! TAAAAAGCATGATGGGACAA+TGG + Chr3:90539544-90539563 MsG0380017003.01.T01:intron 35.0%
! TATACTGGCTAGATGTTCAA+TGG - Chr3:90550600-90550619 None:intergenic 35.0%
! TCACACCTGTGTCTTTTAAT+TGG + Chr3:90547541-90547560 MsG0380017003.01.T01:intron 35.0%
! TCCGGATATTTTACACATTC+CGG + Chr3:90540100-90540119 MsG0380017003.01.T01:intron 35.0%
! TCTCTATTTTCAATCCTCCA+GGG + Chr3:90549327-90549346 MsG0380017003.01.T01:intron 35.0%
! TGCAATTCAAAGCTTGTTTC+TGG - Chr3:90540290-90540309 None:intergenic 35.0%
! TGTTATTTGGCAATCAATGC+TGG + Chr3:90551407-90551426 MsG0380017003.01.T01:three_prime_UTR 35.0%
! TTCTCTATTTTCAATCCTCC+AGG + Chr3:90549326-90549345 MsG0380017003.01.T01:intron 35.0%
! TTCTGTCTCCATCTTTTTGT+TGG + Chr3:90548456-90548475 MsG0380017003.01.T01:intron 35.0%
! TTGATTTGAGGAAGAAGATG+GGG - Chr3:90539739-90539758 None:intergenic 35.0%
! TTGTCGTTACAATTGGTTTC+GGG - Chr3:90541657-90541676 None:intergenic 35.0%
! TTTTACACGAATTGAGAGGT+GGG + Chr3:90551224-90551243 MsG0380017003.01.T01:three_prime_UTR 35.0%
! TTTTATGAGACGACCTTTAG+TGG + Chr3:90545573-90545592 MsG0380017003.01.T01:intron 35.0%
! TTTTCTTCTATTGCCGTTGT+TGG + Chr3:90548070-90548089 MsG0380017003.01.T01:intron 35.0%
! TTTTTACACGAATTGAGAGG+TGG + Chr3:90551223-90551242 MsG0380017003.01.T01:three_prime_UTR 35.0%
! TTTTTCCTTTCCTCGAGATA+TGG + Chr3:90549900-90549919 MsG0380017003.01.T01:intron 35.0%
!! AAAATCCGGAAAGCATTAAC+AGG - Chr3:90539641-90539660 None:intergenic 35.0%
!! AAATCCGGAAAGCATTAACA+GGG - Chr3:90539640-90539659 None:intergenic 35.0%
!! AATAAGTATGCGGTTTGGTT+TGG - Chr3:90541557-90541576 None:intergenic 35.0%
!! ACATAGTGTGCCTTTAAGAT+AGG + Chr3:90547970-90547989 MsG0380017003.01.T01:intron 35.0%
!! AGAAAAATCTTGGTGTCAAG+TGG - Chr3:90548056-90548075 None:intergenic 35.0%
!! ATATATGCAGCTTGATGATG+CGG + Chr3:90543358-90543377 MsG0380017003.01.T01:intron 35.0%
!! CCCTATTTGTTGACTTTCAA+CGG - Chr3:90540155-90540174 None:intergenic 35.0%
!! CCTATTTGTTGACTTTCAAC+GGG - Chr3:90540154-90540173 None:intergenic 35.0%
!! CTATTTGTTGACTTTCAACG+GGG - Chr3:90540153-90540172 None:intergenic 35.0%
!! CTTTGTCTCAAGGTTGATTT+TGG + Chr3:90544726-90544745 MsG0380017003.01.T01:intron 35.0%
!! GGTCTTGATGATGCTTTATA+TGG - Chr3:90550015-90550034 None:intergenic 35.0%
!! GTTTGATTTGAGGAAGAAGA+TGG - Chr3:90539741-90539760 None:intergenic 35.0%
!! TCTTATATTGCGGTTTGGTT+TGG - Chr3:90541122-90541141 None:intergenic 35.0%
!! TGGCTTTTGGAGAACTTAAA+AGG - Chr3:90551521-90551540 None:intergenic 35.0%
!! TTGGTTTTCATATCCGGTAT+TGG + Chr3:90544689-90544708 MsG0380017003.01.T01:intron 35.0%
!! TTGTTCTAGAGAGTTCTAAG+GGG - Chr3:90546101-90546120 None:intergenic 35.0%
!!! AATGCGGTTTTTTGCTGTTT+CGG - Chr3:90541014-90541033 None:intergenic 35.0%
!!! AGCATTAACAGGGGTATTTT+TGG - Chr3:90539630-90539649 None:intergenic 35.0%
!!! GATTTTTGGTATAGGCAAGA+CGG - Chr3:90543247-90543266 None:intergenic 35.0%
!!! GCTTTCCGGATTTTAAAATC+TGG + Chr3:90539647-90539666 MsG0380017003.01.T01:intron 35.0%
!!! TTGGATTTTGAAACACTCAC+TGG + Chr3:90539087-90539106 MsG0380017003.01.T01:CDS 35.0%
AAAAACGGGCAGAAGTTGTT+GGG - Chr3:90549885-90549904 None:intergenic 40.0%
AAAACGAGTCGAGGGTAATT+GGG + Chr3:90540818-90540837 MsG0380017003.01.T01:intron 40.0%
AAATCCTTGGAACCTAGTGT+TGG + Chr3:90540344-90540363 MsG0380017003.01.T01:intron 40.0%
AAATGTCAATGTGGCTCCAA+AGG - Chr3:90551587-90551606 None:intergenic 40.0%
AAGCAGATTGTGTTATCTGC+AGG + Chr3:90547020-90547039 MsG0380017003.01.T01:CDS 40.0%
AAGGAGAGAACTATGATGAG+TGG - Chr3:90550478-90550497 None:intergenic 40.0%
AATTACGAGTCGAGGGTAAT+TGG + Chr3:90540869-90540888 MsG0380017003.01.T01:intron 40.0%
ACAAAACATGTGTCTTCCCA+GGG - Chr3:90546873-90546892 None:intergenic 40.0%
ACAAACAAAGTTGACCATGG+TGG - Chr3:90550184-90550203 None:intergenic 40.0%
ACAAATCAAGGCAGAATTGG+CGG - Chr3:90550214-90550233 None:intergenic 40.0%
ACCGACAACATTGTGCAAAA+CGG + Chr3:90548866-90548885 MsG0380017003.01.T01:CDS 40.0%
AGAGTTAGATCCATATCTCG+AGG - Chr3:90549913-90549932 None:intergenic 40.0%
AGATTTGACGAATCCTTCGT+TGG + Chr3:90550390-90550409 MsG0380017003.01.T01:intron 40.0%
AGCCTGTATCTAAGTATCCA+AGG + Chr3:90544652-90544671 MsG0380017003.01.T01:intron 40.0%
AGTATTCTAACTGGAATGGC+TGG + Chr3:90549039-90549058 MsG0380017003.01.T01:CDS 40.0%
AGTGTAAGTGACAAGATGAC+AGG - Chr3:90549506-90549525 None:intergenic 40.0%
ATAAATCAGGGCATACCCTT+TGG - Chr3:90545749-90545768 None:intergenic 40.0%
ATACCCCTGTTAATGCTTTC+CGG + Chr3:90539633-90539652 MsG0380017003.01.T01:intron 40.0%
ATACTTCTTCGGTTAGTGGA+GGG + Chr3:90543645-90543664 MsG0380017003.01.T01:CDS 40.0%
ATAGTGCAAGAAACTTCACG+TGG - Chr3:90547372-90547391 None:intergenic 40.0%
ATCAGTAGAGTTAAGCAGAG+AGG - Chr3:90546542-90546561 None:intergenic 40.0%
ATCTCGAGGAAAGGAAAAAC+GGG - Chr3:90549899-90549918 None:intergenic 40.0%
ATTACGAGTCGAGGGTAATT+GGG + Chr3:90540870-90540889 MsG0380017003.01.T01:intron 40.0%
ATTGGTTATCCTGAATGGTG+GGG - Chr3:90549751-90549770 None:intergenic 40.0%
ATTTCATAAACGCTGGCGAT+TGG + Chr3:90545532-90545551 MsG0380017003.01.T01:intron 40.0%
ATTTGCCAATTCATCCCACA+GGG + Chr3:90550137-90550156 MsG0380017003.01.T01:intron 40.0%
CAAGGGATTGTCTTGGTTTA+TGG + Chr3:90551348-90551367 MsG0380017003.01.T01:three_prime_UTR 40.0%
CAAGGTTATGTGCTTCTCTT+TGG + Chr3:90544670-90544689 MsG0380017003.01.T01:intron 40.0%
CACCGTCAATGAAATTAGCT+TGG - Chr3:90550824-90550843 None:intergenic 40.0%
CATAAACCAAGACAATCCCT+TGG - Chr3:90551350-90551369 None:intergenic 40.0%
CATAGCAGAGGCAAAATTGT+TGG - Chr3:90549661-90549680 None:intergenic 40.0%
CATGGGCAAAACAAATGAGA+TGG + Chr3:90547753-90547772 MsG0380017003.01.T01:intron 40.0%
CATTCTCCACAAGTACAGTA+AGG + Chr3:90550102-90550121 MsG0380017003.01.T01:intron 40.0%
CCCGTTGAAAGTCAACAAAT+AGG + Chr3:90540151-90540170 MsG0380017003.01.T01:intron 40.0%
CCGAATTGTTTAACGCATTC+CGG - Chr3:90540207-90540226 None:intergenic 40.0%
CCGGAATGCGTTAAACAATT+CGG + Chr3:90540204-90540223 MsG0380017003.01.T01:intron 40.0%
CCTAAACATCATGTCTACTG+AGG - Chr3:90546414-90546433 None:intergenic 40.0%
CCTCAGTAGACATGATGTTT+AGG + Chr3:90546411-90546430 MsG0380017003.01.T01:intron 40.0%
CGCAAAAAGCTGATCATTAG+CGG - Chr3:90544922-90544941 None:intergenic 40.0%
CGTAGACCAAATTTAAACGC+AGG - Chr3:90541351-90541370 None:intergenic 40.0%
CTACTCTGTGAGATAAGACT+TGG + Chr3:90543971-90543990 MsG0380017003.01.T01:intron 40.0%
CTCAATGATGTCCAAATCCA+AGG + Chr3:90551330-90551349 MsG0380017003.01.T01:three_prime_UTR 40.0%
CTCACTGGTATAATGTTGGA+AGG + Chr3:90539102-90539121 MsG0380017003.01.T01:CDS 40.0%
CTCAGTTAGATCAGTTTACC+GGG + Chr3:90551118-90551137 MsG0380017003.01.T01:three_prime_UTR 40.0%
CTCATTCAGCACAAGAGTTA+TGG - Chr3:90540419-90540438 None:intergenic 40.0%
CTCTCGTCCTTATATTGAAG+GGG - Chr3:90547815-90547834 None:intergenic 40.0%
CTGTTACACCGAAGATTTCA+CGG + Chr3:90543576-90543595 MsG0380017003.01.T01:CDS 40.0%
CTTATCTCACAGAGTAGAGT+CGG - Chr3:90543968-90543987 None:intergenic 40.0%
CTTCATGATGAACCAACATC+AGG - Chr3:90540616-90540635 None:intergenic 40.0%
CTTCATTCTTCTGCTGTCAT+GGG + Chr3:90546978-90546997 MsG0380017003.01.T01:CDS 40.0%
CTTCTAGTGGAGCAAAAGTT+AGG - Chr3:90539969-90539988 None:intergenic 40.0%
CTTCTTTCCTCTATCACTGA+TGG + Chr3:90546382-90546401 MsG0380017003.01.T01:intron 40.0%
GAAGAAACCATCAGTGATAG+AGG - Chr3:90546392-90546411 None:intergenic 40.0%
GAAGAAGATGGGGAAGAAAT+TGG - Chr3:90539729-90539748 None:intergenic 40.0%
GAAGGATTCGTCAAATCTAG+AGG - Chr3:90550388-90550407 None:intergenic 40.0%
GAATACATCCGAACCAAATG+CGG - Chr3:90541030-90541049 None:intergenic 40.0%
GAATGAAGATTCCTGTGCAA+TGG - Chr3:90546966-90546985 None:intergenic 40.0%
GAATGTGAAAGATTTGTGGG+AGG - Chr3:90550280-90550299 None:intergenic 40.0%
GAGTTATGGCTACTTCTGAA+TGG + Chr3:90539187-90539206 MsG0380017003.01.T01:CDS 40.0%
GATTGTCTTGGTTTATGGTG+AGG + Chr3:90551353-90551372 MsG0380017003.01.T01:three_prime_UTR 40.0%
GCAAAAAACCGCATTTGGTT+CGG + Chr3:90541019-90541038 MsG0380017003.01.T01:intron 40.0%
GCAAAAAGCTGATCATTAGC+GGG - Chr3:90544921-90544940 None:intergenic 40.0%
GCATACCTGGTTGTATATAC+TGG - Chr3:90550615-90550634 None:intergenic 40.0%
GCATTCCGGATTATGTAATC+CGG - Chr3:90540193-90540212 None:intergenic 40.0%
GGAGAATGCAAGTGTGATAT+TGG - Chr3:90550090-90550109 None:intergenic 40.0%
GGCAAAACAAATGAGATGGT+TGG + Chr3:90547757-90547776 MsG0380017003.01.T01:intron 40.0%
GGCACCAGAAAGATAAATCA+GGG - Chr3:90545761-90545780 None:intergenic 40.0%
GGGTATAGATAATATGCCTG+AGG + Chr3:90551244-90551263 MsG0380017003.01.T01:three_prime_UTR 40.0%
GGTGTGAGATAATAGAATGG+TGG - Chr3:90547528-90547547 None:intergenic 40.0%
GTCTGAATAGCACGTTCTAA+CGG - Chr3:90543057-90543076 None:intergenic 40.0%
GTGAGAAACACAGTAGACAA+GGG - Chr3:90540556-90540575 None:intergenic 40.0%
GTGAGATAATAGAATGGTGG+CGG - Chr3:90547525-90547544 None:intergenic 40.0%
GTGCAGACAGGAGAATATTT+GGG + Chr3:90547042-90547061 MsG0380017003.01.T01:CDS 40.0%
GTGTGATATTGGGAAAAAGC+TGG - Chr3:90550079-90550098 None:intergenic 40.0%
GTTAGTTGGACCATAACTTG+AGG + Chr3:90539924-90539943 MsG0380017003.01.T01:intron 40.0%
GTTCATACTTCTTCGGTTAG+TGG + Chr3:90543641-90543660 MsG0380017003.01.T01:CDS 40.0%
TAAGGGGATAACTAACTGAC+AGG - Chr3:90546085-90546104 None:intergenic 40.0%
TAAGTTCTCCAAAAGCCACA+TGG + Chr3:90551523-90551542 MsG0380017003.01.T01:three_prime_UTR 40.0%
TAATATGCCTGAGGATGTAC+AGG + Chr3:90551253-90551272 MsG0380017003.01.T01:three_prime_UTR 40.0%
TACAAAACATGTGTCTTCCC+AGG - Chr3:90546874-90546893 None:intergenic 40.0%
TACATTCCATGTCATGTGGT+TGG + Chr3:90549445-90549464 MsG0380017003.01.T01:intron 40.0%
TAGATCCATATCTCGAGGAA+AGG - Chr3:90549908-90549927 None:intergenic 40.0%
TAGCAGAGGCAAAATTGTTG+GGG - Chr3:90549659-90549678 None:intergenic 40.0%
TAGTGCAAGAAACTTCACGT+GGG - Chr3:90547371-90547390 None:intergenic 40.0%
TAGTGGAGCAAAAGTTAGGT+CGG - Chr3:90539965-90539984 None:intergenic 40.0%
TATCGCTGATCCATCTTTAG+TGG + Chr3:90549352-90549371 MsG0380017003.01.T01:intron 40.0%
TATGATAGGAATGTGATCGG+AGG - Chr3:90539270-90539289 None:intergenic 40.0%
TATTTGCCAATTCATCCCAC+AGG + Chr3:90550136-90550155 MsG0380017003.01.T01:intron 40.0%
TCAATGCTGGTGCAAAGATT+TGG + Chr3:90551420-90551439 MsG0380017003.01.T01:three_prime_UTR 40.0%
TCAGAAACAAGGGTTTGGAT+TGG - Chr3:90543289-90543308 None:intergenic 40.0%
TCAGACGTCATACAAAACAC+TGG + Chr3:90544253-90544272 MsG0380017003.01.T01:intron 40.0%
TCAGCAAAATGTTGAAGGGA+AGG + Chr3:90543691-90543710 MsG0380017003.01.T01:CDS 40.0%
TCCACTAGCATAAACAGCAT+TGG + Chr3:90549627-90549646 MsG0380017003.01.T01:intron 40.0%
TCCAGAACAAAAAGAACACC+AGG + Chr3:90544785-90544804 MsG0380017003.01.T01:intron 40.0%
TCCGGAATGTGATTATATGG+AGG + Chr3:90540236-90540255 MsG0380017003.01.T01:intron 40.0%
TCGACAAACAAAGTTGACCA+TGG - Chr3:90550187-90550206 None:intergenic 40.0%
TCTAGCCAGTATATACAACC+AGG + Chr3:90550607-90550626 MsG0380017003.01.T01:intron 40.0%
TCTCCGATTAATCTTCCTCT+CGG - Chr3:90541683-90541702 None:intergenic 40.0%
TCTCGTCCTTATATTGAAGG+GGG - Chr3:90547814-90547833 None:intergenic 40.0%
TCTGAATAGCACGTTCTAAC+GGG - Chr3:90543056-90543075 None:intergenic 40.0%
TCTTCATTCTTCTGCTGTCA+TGG + Chr3:90546977-90546996 MsG0380017003.01.T01:CDS 40.0%
TCTTTCTTCTTGCACCAAAG+TGG + Chr3:90549930-90549949 MsG0380017003.01.T01:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + Chr3:90548731-90548750 MsG0380017003.01.T01:intron 40.0%
TGGCACCAGAAAGATAAATC+AGG - Chr3:90545762-90545781 None:intergenic 40.0%
TGTGAGAAACACAGTAGACA+AGG - Chr3:90540557-90540576 None:intergenic 40.0%
TGTTAGAGAATGGCAAACAG+GGG - Chr3:90539765-90539784 None:intergenic 40.0%
TTGAGATGTGGTTGCTTGAT+TGG - Chr3:90544860-90544879 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + Chr3:90548730-90548749 MsG0380017003.01.T01:intron 40.0%
! AAAACTCTTGTGTGGACTGA+GGG - Chr3:90549426-90549445 None:intergenic 40.0%
! AAATCTAGAGGATTGGTGGA+CGG - Chr3:90550376-90550395 None:intergenic 40.0%
! ACCGTTTTGCACAATGTTGT+CGG - Chr3:90548870-90548889 None:intergenic 40.0%
! AGATTGGTTATCCTGAATGG+TGG - Chr3:90549753-90549772 None:intergenic 40.0%
! AGGATGTACAGGTGTTATCA+TGG + Chr3:90551264-90551283 MsG0380017003.01.T01:three_prime_UTR 40.0%
! ATTTTCTACAGGCTTTGCCA+TGG + Chr3:90547221-90547240 MsG0380017003.01.T01:intron 40.0%
! CAAAGAGAAGCACATAACCT+TGG - Chr3:90544672-90544691 None:intergenic 40.0%
! CAACAATTTTGCCTCTGCTA+TGG + Chr3:90549659-90549678 MsG0380017003.01.T01:intron 40.0%
! CAATCTTTTACTCAACCGCA+TGG + Chr3:90541054-90541073 MsG0380017003.01.T01:intron 40.0%
! CAATGCGGTTTGGATTTGAT+CGG - Chr3:90541494-90541513 None:intergenic 40.0%
! CAGCTCTGATTAATCAAGCT+TGG + Chr3:90548225-90548244 MsG0380017003.01.T01:CDS 40.0%
! CGTAATTAATTTGAGAGCGG+TGG - Chr3:90540856-90540875 None:intergenic 40.0%
! GACACATGTTTTGTAACTGG+TGG + Chr3:90546879-90546898 MsG0380017003.01.T01:CDS 40.0%
! GATTGGTTATCCTGAATGGT+GGG - Chr3:90549752-90549771 None:intergenic 40.0%
! GGACAGAACTTCATGCTTTT+GGG + Chr3:90548174-90548193 MsG0380017003.01.T01:CDS 40.0%
! GGTCGACTTCAACTTGTTTA+TGG + Chr3:90547139-90547158 MsG0380017003.01.T01:CDS 40.0%
! TAAAACTCTTGTGTGGACTG+AGG - Chr3:90549427-90549446 None:intergenic 40.0%
! TCCTGGTGTTCTTTTTGTTC+TGG - Chr3:90544789-90544808 None:intergenic 40.0%
! TCTTTTCATCTCCCAGCTTT+TGG + Chr3:90545063-90545082 MsG0380017003.01.T01:intron 40.0%
! TGGTAAAGGGTGTGATAGAA+AGG - Chr3:90542286-90542305 None:intergenic 40.0%
! TGTCGTTACAATTGGTTTCG+GGG - Chr3:90541656-90541675 None:intergenic 40.0%
! TGTGGACTGAGGGAAATATT+AGG - Chr3:90549416-90549435 None:intergenic 40.0%
! TTGCAGCTTTGTATATGGAG+TGG + Chr3:90551457-90551476 MsG0380017003.01.T01:three_prime_UTR 40.0%
! TTTAAAGTTAACCAGTGCCC+CGG + Chr3:90542796-90542815 MsG0380017003.01.T01:intron 40.0%
! TTTTACTCAACCGCATGGTT+TGG + Chr3:90541059-90541078 MsG0380017003.01.T01:intron 40.0%
!! AAACAGGGGTGTTTGATTTG+AGG - Chr3:90539751-90539770 None:intergenic 40.0%
!! AAATCCAAACCGCATTGGTT+TGG + Chr3:90541497-90541516 MsG0380017003.01.T01:intron 40.0%
!! AATCCGGAAAGCATTAACAG+GGG - Chr3:90539639-90539658 None:intergenic 40.0%
!! AATTTCATTGACGGTGTTGC+AGG + Chr3:90550828-90550847 MsG0380017003.01.T01:intron 40.0%
!! ACAAGAAAGCGAGGTTTTAG+AGG + Chr3:90543075-90543094 MsG0380017003.01.T01:intron 40.0%
!! ACAATCCATGTTGGTGTCAT+GGG - Chr3:90550352-90550371 None:intergenic 40.0%
!! AGAATAGAAGCACTCCAAAG+TGG - Chr3:90545782-90545801 None:intergenic 40.0%
!! GCATTTGGTTCGGATGTATT+CGG + Chr3:90541029-90541048 MsG0380017003.01.T01:intron 40.0%
!! GCCTTGATTTGTTGAACTCT+TGG + Chr3:90550222-90550241 MsG0380017003.01.T01:intron 40.0%
!! GGATTGGTCTCTTTACTACA+TGG + Chr3:90551611-90551630 MsG0380017003.01.T01:three_prime_UTR 40.0%
!! TACAATCCATGTTGGTGTCA+TGG - Chr3:90550353-90550372 None:intergenic 40.0%
!! TATTGCGGTTTGGTTTGGTT+TGG - Chr3:90541117-90541136 None:intergenic 40.0%
!! TCTTGGTGTCAAGTGGAAAT+AGG - Chr3:90548049-90548068 None:intergenic 40.0%
!! TTATCTTTCTGGTGCCACTT+TGG + Chr3:90545765-90545784 MsG0380017003.01.T01:intron 40.0%
!! TTCGTCGGTTCATACTTCTT+CGG + Chr3:90543634-90543653 MsG0380017003.01.T01:CDS 40.0%
!! TTTGCTGTTTCGGTTTGGAT+TGG - Chr3:90541004-90541023 None:intergenic 40.0%
!!! ATGGCATTGTTTTTATGCCC+TGG + Chr3:90546853-90546872 MsG0380017003.01.T01:CDS 40.0%
!!! CTCGGTTTGCGGTTTTTTAT+TGG - Chr3:90540981-90541000 None:intergenic 40.0%
!!! GGTTTTTTGCTGTTTCGGTT+TGG - Chr3:90541009-90541028 None:intergenic 40.0%
!!! TGGCATTGTTTTTATGCCCT+GGG + Chr3:90546854-90546873 MsG0380017003.01.T01:CDS 40.0%
AAAAGAGCCTGTTTCCTTCC+GGG - Chr3:90546612-90546631 None:intergenic 45.0%
AAATTACCCTCGGAGCTTTC+CGG - Chr3:90540728-90540747 None:intergenic 45.0%
AACCATCACACAACCAACGA+AGG - Chr3:90550406-90550425 None:intergenic 45.0%
AACCGACGAAACAGCTACTT+CGG - Chr3:90543624-90543643 None:intergenic 45.0%
AAGCAGAAGGAGCAACCATA+GGG - Chr3:90545919-90545938 None:intergenic 45.0%
AAGTTGAAGTCGACCGGATT+GGG - Chr3:90547134-90547153 None:intergenic 45.0%
AATCAAGCTTGGTCTCCTGA+TGG + Chr3:90548236-90548255 MsG0380017003.01.T01:CDS 45.0%
ACATCTCAAGTCAGCACAAG+AGG + Chr3:90544871-90544890 MsG0380017003.01.T01:CDS 45.0%
ACCGAAGATTTCACGGTCAT+CGG + Chr3:90543583-90543602 MsG0380017003.01.T01:CDS 45.0%
ACGGAGATTGTTAACTTCGC+GGG - Chr3:90543222-90543241 None:intergenic 45.0%
ACTTCTACTCTCTGAATGCG+AGG + Chr3:90546237-90546256 MsG0380017003.01.T01:intron 45.0%
AGAAGATATAGCTTGGCACC+CGG + Chr3:90546591-90546610 MsG0380017003.01.T01:CDS 45.0%
AGAATGTGGTGTGACATAGG+TGG + Chr3:90539372-90539391 MsG0380017003.01.T01:intron 45.0%
AGAGGAAAACATACTCCCTC+TGG - Chr3:90542513-90542532 None:intergenic 45.0%
AGATTCCTGTGCAATGGTCT+TGG - Chr3:90546960-90546979 None:intergenic 45.0%
AGATTTGTGGGAGGACATCA+AGG - Chr3:90550271-90550290 None:intergenic 45.0%
AGCAGGATGATGAGGACAAA+TGG + Chr3:90546931-90546950 MsG0380017003.01.T01:CDS 45.0%
AGGAATAGACTGAAGCCACA+AGG - Chr3:90548375-90548394 None:intergenic 45.0%
AGGAGGAATGTTAGCATACC+TGG - Chr3:90550628-90550647 None:intergenic 45.0%
AGGCCTATATCTACAAGTGG+AGG - Chr3:90551554-90551573 None:intergenic 45.0%
AGTGCAAGCACCTCAAGTTA+TGG - Chr3:90539937-90539956 None:intergenic 45.0%
AGTTCGCATCACAATAGCAG+CGG + Chr3:90540576-90540595 MsG0380017003.01.T01:intron 45.0%
ATAAAATCCGGAAAGCTCCG+AGG + Chr3:90540718-90540737 MsG0380017003.01.T01:intron 45.0%
ATACCATGCGCAGAATTGAC+AGG - Chr3:90540929-90540948 None:intergenic 45.0%
ATGGAGTGGATCCTCTCTAA+TGG + Chr3:90551471-90551490 MsG0380017003.01.T01:three_prime_UTR 45.0%
ATTCCATGTCATGTGGTTGG+AGG + Chr3:90549448-90549467 MsG0380017003.01.T01:intron 45.0%
ATTGTGCGTCCCAAAAACAG+AGG + Chr3:90546560-90546579 MsG0380017003.01.T01:CDS 45.0%
ATTTCACGGTCATCGGGAAA+AGG + Chr3:90543590-90543609 MsG0380017003.01.T01:CDS 45.0%
CAAAACGAGTCGAGGGTAAT+TGG + Chr3:90540817-90540836 MsG0380017003.01.T01:intron 45.0%
CAAACCAAACCAATGCGGTT+TGG - Chr3:90541504-90541523 None:intergenic 45.0%
CACATTCTCTTGGTAGGAGA+TGG + Chr3:90550293-90550312 MsG0380017003.01.T01:intron 45.0%
CATACTTCTTCGGTTAGTGG+AGG + Chr3:90543644-90543663 MsG0380017003.01.T01:CDS 45.0%
CATCCACCCCCTTCAATATA+AGG + Chr3:90547805-90547824 MsG0380017003.01.T01:intron 45.0%
CCAAATCCAAGGGATTGTCT+TGG + Chr3:90551341-90551360 MsG0380017003.01.T01:three_prime_UTR 45.0%
CCAAGACAATCCCTTGGATT+TGG - Chr3:90551344-90551363 None:intergenic 45.0%
CCACGCAACTACTGAATCAT+GGG - Chr3:90547783-90547802 None:intergenic 45.0%
CCTCCGAGAGGAAGATTAAT+CGG + Chr3:90541677-90541696 MsG0380017003.01.T01:intron 45.0%
CGAACCAAACCAAACCAATG+CGG - Chr3:90541509-90541528 None:intergenic 45.0%
CGATCAAATCCAAACCGCAT+TGG + Chr3:90541492-90541511 MsG0380017003.01.T01:intron 45.0%
CGGTAAAAATGCCAATCCCT+CGG - Chr3:90551077-90551096 None:intergenic 45.0%
CGTCAAATCTAGAGGATTGG+TGG - Chr3:90550380-90550399 None:intergenic 45.0%
CTATCTCGTTGACAAGCTTG+TGG - Chr3:90539230-90539249 None:intergenic 45.0%
CTCCTGGTACACAGACTATA+GGG + Chr3:90549124-90549143 MsG0380017003.01.T01:CDS 45.0%
CTTGTAGATATAGGCCTCGA+TGG + Chr3:90551557-90551576 MsG0380017003.01.T01:three_prime_UTR 45.0%
GAAAAACGGGCAGAAGTTGT+TGG - Chr3:90549886-90549905 None:intergenic 45.0%
GAAAAGAGCCTGTTTCCTTC+CGG - Chr3:90546613-90546632 None:intergenic 45.0%
GACGGAGATTGTTAACTTCG+CGG - Chr3:90543223-90543242 None:intergenic 45.0%
GAGAGCAATGGGATCTAACT+TGG - Chr3:90540896-90540915 None:intergenic 45.0%
GAGCCACATTGACATTTGTG+TGG + Chr3:90551590-90551609 MsG0380017003.01.T01:three_prime_UTR 45.0%
GATAACACCTGTACATCCTC+AGG - Chr3:90551263-90551282 None:intergenic 45.0%
GATGGCCAGAAGATATAGCT+TGG + Chr3:90546584-90546603 MsG0380017003.01.T01:CDS 45.0%
GCTAATTCTTGTTCACCGTC+TGG + Chr3:90549374-90549393 MsG0380017003.01.T01:intron 45.0%
GCTATTCAGACAAGAAAGCG+AGG + Chr3:90543066-90543085 MsG0380017003.01.T01:intron 45.0%
GCTCACCAGAAAAGAGTCTT+TGG + Chr3:90548347-90548366 MsG0380017003.01.T01:CDS 45.0%
GCTCCTCCACTTGTAGATAT+AGG + Chr3:90551548-90551567 MsG0380017003.01.T01:three_prime_UTR 45.0%
GCTGGGAGATGAAAAGAGAT+AGG - Chr3:90545060-90545079 None:intergenic 45.0%
GGTGCAGACAGGAGAATATT+TGG + Chr3:90547041-90547060 MsG0380017003.01.T01:CDS 45.0%
GTCAGCACAAGAGGAAATTG+CGG + Chr3:90544880-90544899 MsG0380017003.01.T01:CDS 45.0%
GTGCAAAACGGTACTCATGA+CGG + Chr3:90548878-90548897 MsG0380017003.01.T01:CDS 45.0%
GTTGTGTGATGGTTCCTTCT+AGG + Chr3:90550412-90550431 MsG0380017003.01.T01:intron 45.0%
TAAAATCCGGAAAGCTCCGA+GGG + Chr3:90540719-90540738 MsG0380017003.01.T01:intron 45.0%
TACTCCAACACTAGGTTCCA+AGG - Chr3:90540351-90540370 None:intergenic 45.0%
TATAGTCTGTGTACCAGGAG+CGG - Chr3:90549124-90549143 None:intergenic 45.0%
TCCTGGTACACAGACTATAG+GGG + Chr3:90549125-90549144 MsG0380017003.01.T01:CDS 45.0%
TCGAGGCCTATATCTACAAG+TGG - Chr3:90551557-90551576 None:intergenic 45.0%
TCGGAGGTTGTCGTTACAAT+TGG - Chr3:90541664-90541683 None:intergenic 45.0%
TCGGGGGAATAGTCATACTA+GGG - Chr3:90541639-90541658 None:intergenic 45.0%
TCTGGAAAGTCCAAGCCAAA+GGG + Chr3:90545731-90545750 MsG0380017003.01.T01:intron 45.0%
TGCAAAACGGTACTCATGAC+GGG + Chr3:90548879-90548898 MsG0380017003.01.T01:CDS 45.0%
TGTCGGACACTGATACATGT+CGG + Chr3:90544404-90544423 MsG0380017003.01.T01:intron 45.0%
TTAAAGTTAACCAGTGCCCC+GGG + Chr3:90542797-90542816 MsG0380017003.01.T01:intron 45.0%
TTCGGGGGAATAGTCATACT+AGG - Chr3:90541640-90541659 None:intergenic 45.0%
! AATTTTGCCTCTGCTATGGG+TGG + Chr3:90549663-90549682 MsG0380017003.01.T01:intron 45.0%
! ACTCTCTGAATGCGAGGTTT+TGG + Chr3:90546243-90546262 MsG0380017003.01.T01:intron 45.0%
! AGGCTCCAAAGACTCTTTTC+TGG - Chr3:90548355-90548374 None:intergenic 45.0%
! ATCCTTCGTTGGTTGTGTGA+TGG + Chr3:90550401-90550420 MsG0380017003.01.T01:intron 45.0%
! ATGATCAGCTTTTTGCGACC+AGG + Chr3:90544925-90544944 MsG0380017003.01.T01:CDS 45.0%
! ATGCTAGTGGATCTTGTGAG+CGG - Chr3:90549538-90549557 None:intergenic 45.0%
! ATGGTAAGTTGAAGACCCTG+TGG - Chr3:90550155-90550174 None:intergenic 45.0%
! CAGAACTTCATGCTTTTGGG+TGG + Chr3:90548177-90548196 MsG0380017003.01.T01:CDS 45.0%
! CGGACAGAACTTCATGCTTT+TGG + Chr3:90548173-90548192 MsG0380017003.01.T01:CDS 45.0%
! CTTTAGTGTTGCTGTACCAG+AGG + Chr3:90539819-90539838 MsG0380017003.01.T01:intron 45.0%
! GAAAGCTCCGAGGGTAATTT+TGG + Chr3:90540728-90540747 MsG0380017003.01.T01:intron 45.0%
! GAAATCTTCGGTGTAACAGC+AGG - Chr3:90543575-90543594 None:intergenic 45.0%
! GATAGAGAAGCATACTCACG+AGG - Chr3:90545462-90545481 None:intergenic 45.0%
! GCCAATGCTGTTTATGCTAG+TGG - Chr3:90549631-90549650 None:intergenic 45.0%
! GCTTTTTGCGACCAGGTAAT+TGG + Chr3:90544932-90544951 MsG0380017003.01.T01:intron 45.0%
! GGAAAGGCATGCTTAGATGT+TGG + Chr3:90548630-90548649 MsG0380017003.01.T01:intron 45.0%
! GGTGTCATGGGTGATGAATA+CGG - Chr3:90550340-90550359 None:intergenic 45.0%
! GTCGTTACAATTGGTTTCGG+GGG - Chr3:90541655-90541674 None:intergenic 45.0%
! GTGATCGTGCTGTTGTACTT+TGG + Chr3:90546904-90546923 MsG0380017003.01.T01:CDS 45.0%
! TGGTAAGTTGAAGACCCTGT+GGG - Chr3:90550154-90550173 None:intergenic 45.0%
! TGGTGGTCTTGAAGATGTGA+TGG + Chr3:90539400-90539419 MsG0380017003.01.T01:intron 45.0%
! TTCCGAAGTAGCTGTTTCGT+CGG + Chr3:90543619-90543638 MsG0380017003.01.T01:CDS 45.0%
! TTCTGGAAAGTCCAAGCCAA+AGG + Chr3:90545730-90545749 MsG0380017003.01.T01:intron 45.0%
! TTGCAGTGCTTTGGATGGAT+TGG + Chr3:90545702-90545721 MsG0380017003.01.T01:intron 45.0%
! TTGGATTTGATCGGTTGGTG+CGG - Chr3:90541485-90541504 None:intergenic 45.0%
! TTTGGGTTTGATGTTGGTGC+AGG + Chr3:90547059-90547078 MsG0380017003.01.T01:CDS 45.0%
!! AAAGAGTCTTTGGAGCCTTG+TGG + Chr3:90548357-90548376 MsG0380017003.01.T01:CDS 45.0%
!! CAAACCGCATTGGTTTGGTT+TGG + Chr3:90541502-90541521 MsG0380017003.01.T01:intron 45.0%
!! CGCATTGGTTTGGTTTGGTT+CGG + Chr3:90541507-90541526 MsG0380017003.01.T01:intron 45.0%
!! CGGTTTGGTTTGGTTTGGTT+CGG - Chr3:90541112-90541131 None:intergenic 45.0%
!! GTATGCGGTTTGGTTTGGTT+CGG - Chr3:90541552-90541571 None:intergenic 45.0%
!! TCTTGTGCTGACTTGAGATG+TGG - Chr3:90544872-90544891 None:intergenic 45.0%
!! TGGATGGATTGGTCAACTTC+TGG + Chr3:90545713-90545732 MsG0380017003.01.T01:intron 45.0%
!! TGGCCATCTCCTCTGTTTTT+GGG - Chr3:90546572-90546591 None:intergenic 45.0%
!! TGTTTCGGTTTGGATTGGCT+CGG - Chr3:90540999-90541018 None:intergenic 45.0%
!! TTAGGAGTGTTGCAGTGCTT+TGG + Chr3:90545693-90545712 MsG0380017003.01.T01:intron 45.0%
!! TTGGTTTGGTTTGGTTCGGT+TGG - Chr3:90541108-90541127 None:intergenic 45.0%
!! TTTGGTGCTTAACCAATGCC+CGG - Chr3:90542818-90542837 None:intergenic 45.0%
!!! AAATATATATTTTTAGAAAA+TGG - Chr3:90545385-90545404 None:intergenic 5.0%
!!! TGATAAAAATTTAATTTATT+TGG - Chr3:90542836-90542855 None:intergenic 5.0%
ACCCCTATAGTCTGTGTACC+AGG - Chr3:90549129-90549148 None:intergenic 50.0%
ACCTGAGTGATCACATTCCC+TGG + Chr3:90550506-90550525 MsG0380017003.01.T01:intron 50.0%
AGAGGAAGAGGACGACAAAG+AGG - Chr3:90549694-90549713 None:intergenic 50.0%
AGAGGACAAGCCCCATGTTA+AGG + Chr3:90546821-90546840 MsG0380017003.01.T01:CDS 50.0%
AGCTCTTGTGAGCTTGAGCT+AGG + Chr3:90546200-90546219 MsG0380017003.01.T01:intron 50.0%
AGCTTTCCAAGCAGCTCTTG+CGG - Chr3:90544583-90544602 None:intergenic 50.0%
ATACAACAGAGGCCTCGCAT+AGG - Chr3:90545318-90545337 None:intergenic 50.0%
ATTCCTTAACCAGTGCTCCG+GGG + Chr3:90542926-90542945 MsG0380017003.01.T01:intron 50.0%
ATTGTGGAGACTGTAGTCCG+AGG + Chr3:90551057-90551076 MsG0380017003.01.T01:three_prime_UTR 50.0%
CACTCAAATGGGAGGGTTGT+TGG + Chr3:90539068-90539087 MsG0380017003.01.T01:CDS 50.0%
CACTGACATCAGACACGCAT+TGG + Chr3:90543901-90543920 MsG0380017003.01.T01:intron 50.0%
CATCACCCATGACACCAACA+TGG + Chr3:90550344-90550363 MsG0380017003.01.T01:intron 50.0%
CCCATGATTCAGTAGTTGCG+TGG + Chr3:90547780-90547799 MsG0380017003.01.T01:intron 50.0%
CCCGATGACCGTGAAATCTT+CGG - Chr3:90543587-90543606 None:intergenic 50.0%
CCGAAGATTTCACGGTCATC+GGG + Chr3:90543584-90543603 MsG0380017003.01.T01:CDS 50.0%
CCGATTAATCTTCCTCTCGG+AGG - Chr3:90541680-90541699 None:intergenic 50.0%
CCTGAGTGATCACATTCCCT+GGG + Chr3:90550507-90550526 MsG0380017003.01.T01:intron 50.0%
CGACTCGTTCCTTACCATGA+AGG + Chr3:90550885-90550904 MsG0380017003.01.T01:CDS 50.0%
CGCAAATGGGGATTCCTAGA+AGG - Chr3:90550429-90550448 None:intergenic 50.0%
CGGGGGAATAGTCATACTAG+GGG - Chr3:90541638-90541657 None:intergenic 50.0%
CGTCCCAAAAACAGAGGAGA+TGG + Chr3:90546566-90546585 MsG0380017003.01.T01:CDS 50.0%
CGTCCTTATATTGAAGGGGG+TGG - Chr3:90547811-90547830 None:intergenic 50.0%
CTAGCATCAAGGCCTGATGT+TGG + Chr3:90540601-90540620 MsG0380017003.01.T01:intron 50.0%
CTTACCATAGCATGCCACCA+TGG + Chr3:90550167-90550186 MsG0380017003.01.T01:intron 50.0%
CTTCAGCCGCTTCTCATTAG+AGG + Chr3:90542174-90542193 MsG0380017003.01.T01:intron 50.0%
GAACCTGTCAATTCTGCGCA+TGG + Chr3:90540923-90540942 MsG0380017003.01.T01:intron 50.0%
GAAGACCCTGTGGGATGAAT+TGG - Chr3:90550145-90550164 None:intergenic 50.0%
GAAGCAGAAGGAGCAACCAT+AGG - Chr3:90545920-90545939 None:intergenic 50.0%
GAGGACAAGCCCCATGTTAA+GGG + Chr3:90546822-90546841 MsG0380017003.01.T01:CDS 50.0%
GAGGAGAAGAGAAACCTGGT+GGG - Chr3:90549717-90549736 None:intergenic 50.0%
GATCTTGTGAGCGGTCAGAA+AGG - Chr3:90549529-90549548 None:intergenic 50.0%
GATTCCTTAACCAGTGCTCC+GGG + Chr3:90542925-90542944 MsG0380017003.01.T01:intron 50.0%
GCAAACCGAACCAAACCATG+CGG - Chr3:90541072-90541091 None:intergenic 50.0%
GCCACGCAACTACTGAATCA+TGG - Chr3:90547784-90547803 None:intergenic 50.0%
GCTCCTGGTACACAGACTAT+AGG + Chr3:90549123-90549142 MsG0380017003.01.T01:CDS 50.0%
GCTGTACCAGAGGAACTTAC+TGG + Chr3:90539829-90539848 MsG0380017003.01.T01:intron 50.0%
GGATTCCTTAACCAGTGCTC+CGG + Chr3:90542924-90542943 MsG0380017003.01.T01:intron 50.0%
GGGTGCCAAGCTATATCTTC+TGG - Chr3:90546592-90546611 None:intergenic 50.0%
GTACCACCAGTAAGTTCCTC+TGG - Chr3:90539838-90539857 None:intergenic 50.0%
GTACCAGAGGAACTTACTGG+TGG + Chr3:90539832-90539851 MsG0380017003.01.T01:intron 50.0%
GTCAATGTGGCTCCAAAGGA+AGG - Chr3:90551583-90551602 None:intergenic 50.0%
GTCATGGGTGATGAATACGG+TGG - Chr3:90550337-90550356 None:intergenic 50.0%
GTCGGACACTGATACATGTC+GGG + Chr3:90544405-90544424 MsG0380017003.01.T01:intron 50.0%
GTGGACGGTACAATCCATGT+TGG - Chr3:90550361-90550380 None:intergenic 50.0%
GTGTGACATAGGTGGCAAGA+TGG + Chr3:90539380-90539399 MsG0380017003.01.T01:intron 50.0%
GTTTCTCTTCTCCTCGTGGT+CGG + Chr3:90549722-90549741 MsG0380017003.01.T01:intron 50.0%
TCAGCAGAAGCAGAAGCAGA+AGG - Chr3:90545932-90545951 None:intergenic 50.0%
TCTACCACTGTCAAGGAACC+CGG - Chr3:90551139-90551158 None:intergenic 50.0%
TCTGCGCATGGTATGACTGA+GGG + Chr3:90540935-90540954 MsG0380017003.01.T01:intron 50.0%
TGACATAGGTGGCAAGATGG+TGG + Chr3:90539383-90539402 MsG0380017003.01.T01:intron 50.0%
TGAGGCTTCACTGCTGCTAT+TGG + Chr3:90551371-90551390 MsG0380017003.01.T01:three_prime_UTR 50.0%
TGGTATAGGCAAGACGGTGA+CGG - Chr3:90543241-90543260 None:intergenic 50.0%
TGTCCTGTTGGACTTCCAGA+CGG - Chr3:90549392-90549411 None:intergenic 50.0%
TGTCTGTAGCGTACTCCCTA+TGG + Chr3:90545901-90545920 MsG0380017003.01.T01:intron 50.0%
TGTTATCTGCAGGTGCAGAC+AGG + Chr3:90547030-90547049 MsG0380017003.01.T01:CDS 50.0%
TGTTCATGCTGCAGTCGAAC+AGG - Chr3:90549802-90549821 None:intergenic 50.0%
TTCTGCGCATGGTATGACTG+AGG + Chr3:90540934-90540953 MsG0380017003.01.T01:intron 50.0%
TTGACCATGGTGGCATGCTA+TGG - Chr3:90550174-90550193 None:intergenic 50.0%
TTGTAACGACAACCTCCGAG+AGG + Chr3:90541665-90541684 MsG0380017003.01.T01:intron 50.0%
TTGTGGAGACTGTAGTCCGA+GGG + Chr3:90551058-90551077 MsG0380017003.01.T01:three_prime_UTR 50.0%
TTTACCGGGTTCCTTGACAG+TGG + Chr3:90551132-90551151 MsG0380017003.01.T01:three_prime_UTR 50.0%
! ACCAACAAGAATGCGCTGAC+TGG - Chr3:90549583-90549602 None:intergenic 50.0%
! AGGAGCAACCATGTGGCTTT+TGG - Chr3:90551534-90551553 None:intergenic 50.0%
! CAAGTTGAAGTCGACCGGAT+TGG - Chr3:90547135-90547154 None:intergenic 50.0%
! CATGAGTGTCGTTCCCAATC+CGG + Chr3:90547118-90547137 MsG0380017003.01.T01:CDS 50.0%
! CTGGCCATCTCCTCTGTTTT+TGG - Chr3:90546573-90546592 None:intergenic 50.0%
! GAGTGTTGCAGTGCTTTGGA+TGG + Chr3:90545697-90545716 MsG0380017003.01.T01:intron 50.0%
! GCGGTTTGGATTTGATCGGT+TGG - Chr3:90541490-90541509 None:intergenic 50.0%
! TTGGTGCTTAACCAATGCCC+GGG - Chr3:90542817-90542836 None:intergenic 50.0%
!! AGTCATACTAGGGGTGTTCG+CGG - Chr3:90541629-90541648 None:intergenic 50.0%
!! CCAACAAGAATGCGCTGACT+GGG - Chr3:90549582-90549601 None:intergenic 50.0%
!! CTCAACCGCATGGTTTGGTT+CGG + Chr3:90541064-90541083 MsG0380017003.01.T01:intron 50.0%
!! CTGAATGCGAGGTTTTGGTG+TGG + Chr3:90546248-90546267 MsG0380017003.01.T01:intron 50.0%
!! GCATGGTTTGGTTCGGTTTG+CGG + Chr3:90541071-90541090 MsG0380017003.01.T01:intron 50.0%
!! GGAGCACCGTGATAGAGTTA+TGG + Chr3:90539173-90539192 MsG0380017003.01.T01:CDS 50.0%
!! GTTTGGATTGGCTCGGTTTG+CGG - Chr3:90540992-90541011 None:intergenic 50.0%
!! TGGAAGGGTATCCCTACACA+TGG + Chr3:90539118-90539137 MsG0380017003.01.T01:CDS 50.0%
!!! TGCGGTTCGGTTCGATTTTG+AGG - Chr3:90541606-90541625 None:intergenic 50.0%
AAAATAGGGCGCGCGAGGAA+AGG + Chr3:90540754-90540773 MsG0380017003.01.T01:intron 55.0%
AAACCTGGTGGGAGAGGAAG+AGG - Chr3:90549706-90549725 None:intergenic 55.0%
AACTGGAATGGCTGGCGTGT+TGG + Chr3:90549047-90549066 MsG0380017003.01.T01:CDS 55.0%
ACCTCGAAGACGAGCCAGTT+TGG - Chr3:90543408-90543427 None:intergenic 55.0%
AGCTCGCATAAGCTCGACCT+AGG - Chr3:90545991-90546010 None:intergenic 55.0%
CAAGTGGAGGAGCAACCATG+TGG - Chr3:90551541-90551560 None:intergenic 55.0%
CCACGAGGAGAAGAGAAACC+TGG - Chr3:90549721-90549740 None:intergenic 55.0%
CCAGGTTTCTCTTCTCCTCG+TGG + Chr3:90549718-90549737 MsG0380017003.01.T01:intron 55.0%
CCCAGGGAATGTGATCACTC+AGG - Chr3:90550510-90550529 None:intergenic 55.0%
CCCAGTCAGCGCATTCTTGT+TGG + Chr3:90549579-90549598 MsG0380017003.01.T01:intron 55.0%
CGACTTGCGTACCATCCTTG+CGG - Chr3:90539456-90539475 None:intergenic 55.0%
CGAGGAGAAGAGAAACCTGG+TGG - Chr3:90549718-90549737 None:intergenic 55.0%
CGCAAGGATGGTACGCAAGT+CGG + Chr3:90539454-90539473 MsG0380017003.01.T01:intron 55.0%
CTGCGCATGGTATGACTGAG+GGG + Chr3:90540936-90540955 MsG0380017003.01.T01:intron 55.0%
GAAGAGAAACCTGGTGGGAG+AGG - Chr3:90549712-90549731 None:intergenic 55.0%
GACTTGCGTACCATCCTTGC+GGG - Chr3:90539455-90539474 None:intergenic 55.0%
GAGACTGTAGTCCGAGGGAT+TGG + Chr3:90551063-90551082 MsG0380017003.01.T01:three_prime_UTR 55.0%
GAGAGCGGTGGGATCTAACT+TGG - Chr3:90540844-90540863 None:intergenic 55.0%
GAGATGGTAGAGCGCAAGCT+CGG + Chr3:90550309-90550328 MsG0380017003.01.T01:intron 55.0%
GAGCCTCCAACCACATGACA+TGG - Chr3:90549454-90549473 None:intergenic 55.0%
GATATAGCTTGGCACCCGGA+AGG + Chr3:90546595-90546614 MsG0380017003.01.T01:CDS 55.0%
GATGGATCAGCGATACTCCC+TGG - Chr3:90549347-90549366 None:intergenic 55.0%
GCAAGGATGGTACGCAAGTC+GGG + Chr3:90539455-90539474 MsG0380017003.01.T01:intron 55.0%
GCCTTCTGCAGCCAAAAGCT+GGG - Chr3:90545077-90545096 None:intergenic 55.0%
GCTCGCATAAGCTCGACCTA+GGG - Chr3:90545990-90546009 None:intergenic 55.0%
GCTGGAGAAACAGCGAGAAG+AGG - Chr3:90550061-90550080 None:intergenic 55.0%
GGAAAAAAATAGGGCGCGCG+AGG + Chr3:90540749-90540768 MsG0380017003.01.T01:intron 55.0%
GGAAGAGGACGACAAAGAGG+CGG - Chr3:90549691-90549710 None:intergenic 55.0%
GGAAGCCAAGACCATTGCAC+AGG + Chr3:90546952-90546971 MsG0380017003.01.T01:CDS 55.0%
GTTCACTTTGATGCCGCTCC+TGG + Chr3:90549108-90549127 MsG0380017003.01.T01:CDS 55.0%
GTTCTTCCGCAAGAGCTGCT+TGG + Chr3:90544574-90544593 MsG0380017003.01.T01:intron 55.0%
TCACCGTCTGGAAGTCCAAC+AGG + Chr3:90549386-90549405 MsG0380017003.01.T01:intron 55.0%
TCAGGGCATACCCTTTGGCT+TGG - Chr3:90545744-90545763 None:intergenic 55.0%
TGCCTTCTGCAGCCAAAAGC+TGG - Chr3:90545078-90545097 None:intergenic 55.0%
TGGTGCTTAACCAATGCCCG+GGG - Chr3:90542816-90542835 None:intergenic 55.0%
TGTCGGTGAGCTTGTGCGTA+GGG - Chr3:90548853-90548872 None:intergenic 55.0%
TGTTGTACTTTGGCGCGAGC+AGG + Chr3:90546914-90546933 MsG0380017003.01.T01:CDS 55.0%
TTGTCGGTGAGCTTGTGCGT+AGG - Chr3:90548854-90548873 None:intergenic 55.0%
! CGCGAGGAAAGGCATAGGAT+GGG + Chr3:90540765-90540784 MsG0380017003.01.T01:intron 55.0%
! TAGCAGCGGCTCTAGCATCA+AGG + Chr3:90540590-90540609 MsG0380017003.01.T01:intron 55.0%
! TCTGCTGTCATGGGTGTTGC+TGG + Chr3:90546987-90547006 MsG0380017003.01.T01:CDS 55.0%
!! TCCAAACTGGCTCGTCTTCG+AGG + Chr3:90543404-90543423 MsG0380017003.01.T01:CDS 55.0%
!! TCCCAGCTTTTGGCTGCAGA+AGG + Chr3:90545073-90545092 MsG0380017003.01.T01:intron 55.0%
!! TTTTGGCTGCAGAAGGCACG+AGG + Chr3:90545080-90545099 MsG0380017003.01.T01:intron 55.0%
AGGCCTCGATGGCCTTCCTT+TGG + Chr3:90551568-90551587 MsG0380017003.01.T01:three_prime_UTR 60.0%
AGGGCGCGTGAGAAGACAGT+AGG - Chr3:90539598-90539617 None:intergenic 60.0%
CACGTGCAAGCGGAGCAAGA+GGG - Chr3:90549855-90549874 None:intergenic 60.0%
CCATTTGCGTCCCGCACGAA+GGG + Chr3:90550440-90550459 MsG0380017003.01.T01:intron 60.0%
CCTTCGTGCGGGACGCAAAT+GGG - Chr3:90550442-90550461 None:intergenic 60.0%
CGATGTTACGCCCGCAAGGA+TGG + Chr3:90539442-90539461 MsG0380017003.01.T01:intron 60.0%
CGCGTGAGAAGACAGTAGGG+TGG - Chr3:90539594-90539613 None:intergenic 60.0%
CTTCGTGCGGGACGCAAATG+GGG - Chr3:90550441-90550460 None:intergenic 60.0%
CTTGGCACCCGGAAGGAAAC+AGG + Chr3:90546602-90546621 MsG0380017003.01.T01:CDS 60.0%
GCTCCAAAGGAAGGCCATCG+AGG - Chr3:90551574-90551593 None:intergenic 60.0%
GGATCAGCGATACTCCCTGG+AGG - Chr3:90549344-90549363 None:intergenic 60.0%
GGGCGCGTGAGAAGACAGTA+GGG - Chr3:90539597-90539616 None:intergenic 60.0%
TTAACCAATGCCCGGGGCAC+TGG - Chr3:90542810-90542829 None:intergenic 60.0%
TTAACCAGTGCCCCGGGCAT+TGG + Chr3:90542803-90542822 MsG0380017003.01.T01:intron 60.0%
TTGGCGCGAGCAGGATGATG+AGG + Chr3:90546923-90546942 MsG0380017003.01.T01:CDS 60.0%
! AGGCTATGACGCACTGACGC+AGG + Chr3:90544229-90544248 MsG0380017003.01.T01:intron 60.0%
! GCGCGAGGAAAGGCATAGGA+TGG + Chr3:90540764-90540783 MsG0380017003.01.T01:intron 60.0%
!! ATGGTGGCGGTCAAGTAGCG+TGG - Chr3:90547512-90547531 None:intergenic 60.0%
!! GGGTTTGCTGCACGTGCAAG+CGG - Chr3:90549865-90549884 None:intergenic 60.0%
!! GGTCTTGTTAACCGGTGCCC+CGG - Chr3:90542946-90542965 None:intergenic 60.0%
!! TACTAGGGGTGTTCGCGGTG+CGG - Chr3:90541624-90541643 None:intergenic 60.0%
!! TGGTGGCGGTCAAGTAGCGT+GGG - Chr3:90547511-90547530 None:intergenic 60.0%
CCCATTTGCGTCCCGCACGA+AGG + Chr3:90550439-90550458 MsG0380017003.01.T01:intron 65.0%
CCCTTCGTGCGGGACGCAAA+TGG - Chr3:90550443-90550462 None:intergenic 65.0%
CGTCCTCTTCCTCTCCCACC+AGG + Chr3:90549700-90549719 MsG0380017003.01.T01:intron 65.0%
GCACGTGCAAGCGGAGCAAG+AGG - Chr3:90549856-90549875 None:intergenic 65.0%
GCCTCGCATAGGCAGTCGTG+CGG - Chr3:90545307-90545326 None:intergenic 65.0%
GGTCGGTCTCCCCACCATTC+AGG + Chr3:90549739-90549758 MsG0380017003.01.T01:intron 65.0%
TAACCAGTGCTCCGGGGCAC+CGG + Chr3:90542932-90542951 MsG0380017003.01.T01:intron 65.0%
TCCGCACGACTGCCTATGCG+AGG + Chr3:90545303-90545322 MsG0380017003.01.T01:intron 65.0%
TGGGCGATGTTACGCCCGCA+AGG + Chr3:90539438-90539457 MsG0380017003.01.T01:intron 65.0%
!! GTGCCCCGGAGCACTGGTTA+AGG - Chr3:90542932-90542951 None:intergenic 65.0%
GGCGGAGCCACCCATAGCAG+AGG - Chr3:90549673-90549692 None:intergenic 70.0%
TAACCGGTGCCCCGGAGCAC+TGG - Chr3:90542938-90542957 None:intergenic 70.0%
TGGTGGGGAGACCGACCACG+AGG - Chr3:90549736-90549755 None:intergenic 70.0%
! GGGCGCGCGAGGAAAGGCAT+AGG + Chr3:90540760-90540779 MsG0380017003.01.T01:intron 70.0%
! GGGGTGTTCGCGGTGCGGTT+CGG - Chr3:90541619-90541638 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 90539063 90551790 90539063 ID=MsG0380017003.01;Name=MsG0380017003.01
Chr3 mRNA 90539063 90551790 90539063 ID=MsG0380017003.01.T01;Parent=MsG0380017003.01;Name=MsG0380017003.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0.77|0.9|1|0.66|0.5|10|740|648
Chr3 exon 90548130 90548448 90548130 ID=MsG0380017003.01.T01:exon:3390;Parent=MsG0380017003.01.T01
Chr3 exon 90548791 90548952 90548791 ID=MsG0380017003.01.T01:exon:3391;Parent=MsG0380017003.01.T01
Chr3 exon 90549039 90549146 90549039 ID=MsG0380017003.01.T01:exon:3392;Parent=MsG0380017003.01.T01
Chr3 exon 90550850 90550906 90550850 ID=MsG0380017003.01.T01:exon:3393;Parent=MsG0380017003.01.T01
Chr3 exon 90550988 90551790 90550988 ID=MsG0380017003.01.T01:exon:3394;Parent=MsG0380017003.01.T01
Chr3 CDS 90539063 90539236 90539063 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90543368 90543737 90543368 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90544790 90544946 90544790 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90546531 90546696 90546531 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90546801 90547171 90546801 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90548130 90548448 90548130 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90548791 90548952 90548791 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90549039 90549146 90549039 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90550850 90550906 90550850 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 CDS 90550988 90551050 90550988 ID=MsG0380017003.01.T01:cds;Parent=MsG0380017003.01.T01
Chr3 three_prime_UTR 90551051 90551790 90551051 ID=MsG0380017003.01.T01:three_prime_utr;Parent=MsG0380017003.01.T01
Chr3 mRNA 90539063 90548670 90539063 ID=MsG0380017003.01.T02;Parent=MsG0380017003.01;Name=MsG0380017003.01.T02;_AED=0.49;_eAED=0.54;_QI=0|0.6|0.83|1|1|1|6|219|519
Chr3 exon 90548130 90548670 90548130 ID=MsG0380017003.01.T02:exon:3395;Parent=MsG0380017003.01.T02
Chr3 CDS 90539063 90539236 90539063 ID=MsG0380017003.01.T02:cds;Parent=MsG0380017003.01.T02
Chr3 CDS 90543368 90543737 90543368 ID=MsG0380017003.01.T02:cds;Parent=MsG0380017003.01.T02
Chr3 CDS 90544790 90544946 90544790 ID=MsG0380017003.01.T02:cds;Parent=MsG0380017003.01.T02
Chr3 CDS 90546531 90546696 90546531 ID=MsG0380017003.01.T02:cds;Parent=MsG0380017003.01.T02
Chr3 CDS 90546801 90547171 90546801 ID=MsG0380017003.01.T02:cds;Parent=MsG0380017003.01.T02
Chr3 CDS 90548130 90548451 90548130 ID=MsG0380017003.01.T02:cds;Parent=MsG0380017003.01.T02
Chr3 three_prime_UTR 90548452 90548670 90548452 ID=MsG0380017003.01.T02:three_prime_utr;Parent=MsG0380017003.01.T02
Gene Sequence

>MsG0380017003.01.T02

ATGAGCACTCAAATGGGAGGGTTGTTGGATTTTGAAACACTCACTGGTATAATGTTGGAAGGGTATCCCTACACATGGTTCAAAAGTTTAGGTAAGGATAATGCTATTGAGGAGCACCGTGATAGAGTTATGGCTACTTCTGAATGGTTTGATCAGTTTCTCAACCACAAGCTTCTTGATGATGCGGAAAAGAGATTAAAAGATTCAGAATCCAAACTGGCTCGTCTTCGAGGTCAAACAACTAAAAAAATAACTAACTCAGATGATGATGATAATGGAATTGTAGCTGTCAAGAAAGAGCGTAGATCGAATAGTCCAATTGATAGGAATGAACGTTCTTATAAAAGTAATAAGCAATCTAAAACTGAACTTGTTATTCCTGCTGTTACACCGAAGATTTCACGGTCATCGGGAAAAGGTTCTGTTTCCGAAGTAGCTGTTTCGTCGGTTCATACTTCTTCGGTTAGTGGAGGGAAATCAGATAAGTCGAAAATAGATCAGCAAAATGTTGAAGGGAAGGATAAAGGGACAAAAAGAAAATTTGAACAAAAAGAACACCAGGAATTGATTCCTTTAATACGCAAGAGTTCATCAAAGAAATTAGTACACTGCCAATCAAGCAACCACATCTCAAGTCAGCACAAGAGGAAATTGCGGAGTATTGCTTTGTGTCCCGCTAATGATCAGCTTTTTGCGACCAGATCATCAGCCTCTCTGCTTAACTCTACTGATTGTGCGTCCCAAAAACAGAGGAGATGGCCAGAAGATATAGCTTGGCACCCGGAAGGAAACAGGCTCTTTTCAGTATATACTGCTGATAGTGGAGACTCACAAATATCAGTTACAAATTGGAATAAAATTAAAGGGGTAGAACGTGTGAAATTCTTAGAGGACAAGCCCCATGTTAAGGGAATTATCAATGGCATTGTTTTTATGCCCTGGGAAGACACATGTTTTGTAACTGGTGGAAGTGATCGTGCTGTTGTACTTTGGCGCGAGCAGGATGATGAGGACAAATGGAAGCCAAGACCATTGCACAGGAATCTTCATTCTTCTGCTGTCATGGGTGTTGCTGGTATGCAGCAGAAGCAGATTGTGTTATCTGCAGGTGCAGACAGGAGAATATTTGGGTTTGATGTTGGTGCAGGAAGAGCAGAGTTCACTCATCAGATTGATAGTAAATGCATGAGTGTCGTTCCCAATCCGGTCGACTTCAACTTGTTTATGGTTCAAACAGGGACTCTTGAGAAGCAGCTTCGATTATTTGATATTAGATTGAGGCGGACAGAACTTCATGCTTTTGGGTGGAAACAAGAAAGCAGTGAATCTCAATCAGCTCTGATTAATCAAGCTTGGTCTCCTGATGGTCTTTATATAACATCTGGTTCAGCGGATCCTGTGATTCACATATTTGATATAAGATATAATCTTAACAGGCCGTCACAATCTATAAAAGCTCACCAGAAAAGAGTCTTTGGAGCCTTGTGGCTTCAGTCTATTCCTCTTCTCATATCTATATCATCTGATCTCAACATTGGGTTGCACACCCTGATGAAGTAA

>MsG0380017003.01.T01

ATGAGCACTCAAATGGGAGGGTTGTTGGATTTTGAAACACTCACTGGTATAATGTTGGAAGGGTATCCCTACACATGGTTCAAAAGTTTAGGTAAGGATAATGCTATTGAGGAGCACCGTGATAGAGTTATGGCTACTTCTGAATGGTTTGATCAGTTTCTCAACCACAAGCTTCTTGATGATGCGGAAAAGAGATTAAAAGATTCAGAATCCAAACTGGCTCGTCTTCGAGGTCAAACAACTAAAAAAATAACTAACTCAGATGATGATGATAATGGAATTGTAGCTGTCAAGAAAGAGCGTAGATCGAATAGTCCAATTGATAGGAATGAACGTTCTTATAAAAGTAATAAGCAATCTAAAACTGAACTTGTTATTCCTGCTGTTACACCGAAGATTTCACGGTCATCGGGAAAAGGTTCTGTTTCCGAAGTAGCTGTTTCGTCGGTTCATACTTCTTCGGTTAGTGGAGGGAAATCAGATAAGTCGAAAATAGATCAGCAAAATGTTGAAGGGAAGGATAAAGGGACAAAAAGAAAATTTGAACAAAAAGAACACCAGGAATTGATTCCTTTAATACGCAAGAGTTCATCAAAGAAATTAGTACACTGCCAATCAAGCAACCACATCTCAAGTCAGCACAAGAGGAAATTGCGGAGTATTGCTTTGTGTCCCGCTAATGATCAGCTTTTTGCGACCAGATCATCAGCCTCTCTGCTTAACTCTACTGATTGTGCGTCCCAAAAACAGAGGAGATGGCCAGAAGATATAGCTTGGCACCCGGAAGGAAACAGGCTCTTTTCAGTATATACTGCTGATAGTGGAGACTCACAAATATCAGTTACAAATTGGAATAAAATTAAAGGGGTAGAACGTGTGAAATTCTTAGAGGACAAGCCCCATGTTAAGGGAATTATCAATGGCATTGTTTTTATGCCCTGGGAAGACACATGTTTTGTAACTGGTGGAAGTGATCGTGCTGTTGTACTTTGGCGCGAGCAGGATGATGAGGACAAATGGAAGCCAAGACCATTGCACAGGAATCTTCATTCTTCTGCTGTCATGGGTGTTGCTGGTATGCAGCAGAAGCAGATTGTGTTATCTGCAGGTGCAGACAGGAGAATATTTGGGTTTGATGTTGGTGCAGGAAGAGCAGAGTTCACTCATCAGATTGATAGTAAATGCATGAGTGTCGTTCCCAATCCGGTCGACTTCAACTTGTTTATGGTTCAAACAGGGACTCTTGAGAAGCAGCTTCGATTATTTGATATTAGATTGAGGCGGACAGAACTTCATGCTTTTGGGTGGAAACAAGAAAGCAGTGAATCTCAATCAGCTCTGATTAATCAAGCTTGGTCTCCTGATGGTCTTTATATAACATCTGGTTCAGCGGATCCTGTGATTCACATATTTGATATAAGATATAATCTTAACAGGCCGTCACAATCTATAAAAGCTCACCAGAAAAGAGTCTTTGGAGCCTTGTGGCTTCAGTCTATTCCTCTTCTCATATCTATATCATCTGATCTCAACATTGGGTTGCACACCCTGATGAAGAACATAGGATGGTTCTCATCATCTTCTGTTCGACTTATGAATGGAGAGATCGTTAGGGTCCCTACGCACAAGCTCACCGACAACATTGTGCAAAACGGTACTCATGACGGGCATATGAACCTTTACATTCCAGTTGAGAAACTGAATATTGACAAACTGAAGAGTATTCTAACTGGAATGGCTGGCGTGTTGGCTAACTGCTCTCACGTGTTGCAAGACAAACATAGAAGAGTTCACTTTGATGCCGCTCCTGGTACACAGACTATAGGGGTACTGATCGACTGCTATCTCAATACCAAAAATTACGACTCGTTCCTTACCATGAAGGATGATGTTTTTTTGGAGCTTATCGATGTAATCAACACCTATGAAGTTGATCGAGAAATTTGA

Protein sequence

>MsG0380017003.01.T02

MSTQMGGLLDFETLTGIMLEGYPYTWFKSLGKDNAIEEHRDRVMATSEWFDQFLNHKLLDDAEKRLKDSESKLARLRGQTTKKITNSDDDDNGIVAVKKERRSNSPIDRNERSYKSNKQSKTELVIPAVTPKISRSSGKGSVSEVAVSSVHTSSVSGGKSDKSKIDQQNVEGKDKGTKRKFEQKEHQELIPLIRKSSSKKLVHCQSSNHISSQHKRKLRSIALCPANDQLFATRSSASLLNSTDCASQKQRRWPEDIAWHPEGNRLFSVYTADSGDSQISVTNWNKIKGVERVKFLEDKPHVKGIINGIVFMPWEDTCFVTGGSDRAVVLWREQDDEDKWKPRPLHRNLHSSAVMGVAGMQQKQIVLSAGADRRIFGFDVGAGRAEFTHQIDSKCMSVVPNPVDFNLFMVQTGTLEKQLRLFDIRLRRTELHAFGWKQESSESQSALINQAWSPDGLYITSGSADPVIHIFDIRYNLNRPSQSIKAHQKRVFGALWLQSIPLLISISSDLNIGLHTLMK*

>MsG0380017003.01.T01

MSTQMGGLLDFETLTGIMLEGYPYTWFKSLGKDNAIEEHRDRVMATSEWFDQFLNHKLLDDAEKRLKDSESKLARLRGQTTKKITNSDDDDNGIVAVKKERRSNSPIDRNERSYKSNKQSKTELVIPAVTPKISRSSGKGSVSEVAVSSVHTSSVSGGKSDKSKIDQQNVEGKDKGTKRKFEQKEHQELIPLIRKSSSKKLVHCQSSNHISSQHKRKLRSIALCPANDQLFATRSSASLLNSTDCASQKQRRWPEDIAWHPEGNRLFSVYTADSGDSQISVTNWNKIKGVERVKFLEDKPHVKGIINGIVFMPWEDTCFVTGGSDRAVVLWREQDDEDKWKPRPLHRNLHSSAVMGVAGMQQKQIVLSAGADRRIFGFDVGAGRAEFTHQIDSKCMSVVPNPVDFNLFMVQTGTLEKQLRLFDIRLRRTELHAFGWKQESSESQSALINQAWSPDGLYITSGSADPVIHIFDIRYNLNRPSQSIKAHQKRVFGALWLQSIPLLISISSDLNIGLHTLMKNIGWFSSSSVRLMNGEIVRVPTHKLTDNIVQNGTHDGHMNLYIPVEKLNIDKLKSILTGMAGVLANCSHVLQDKHRRVHFDAAPGTQTIGVLIDCYLNTKNYDSFLTMKDDVFLELIDVINTYEVDREI*