AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043944.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043944.01.T01 MTR_8g045440 98.529 544 8 0 7 550 7 550 0.0 1092
MsG0880043944.01.T01 MTR_8g041740 92.463 544 40 1 7 550 7 549 0.0 998
MsG0880043944.01.T01 MTR_8g045463 88.949 552 49 3 1 550 1 542 0.0 960
MsG0880043944.01.T01 MTR_8g045470 88.949 552 49 3 1 550 1 542 0.0 960
MsG0880043944.01.T01 MTR_8g045440 98.237 397 7 0 7 403 7 403 0.0 803
MsG0880043944.01.T01 MTR_5g069620 71.429 84 24 0 38 121 8 91 1.03e-34 126
MsG0880043944.01.T01 MTR_7g086360 25.000 340 191 12 29 362 61 342 5.38e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043944.01.T01 AT3G21060 67.108 529 169 3 7 535 7 530 0.0 701
MsG0880043944.01.T01 AT2G43770 23.547 344 191 14 29 362 59 340 6.31e-13 70.5

Find 147 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGTGATTGAAGAATATT+TGG 0.157133 8:+33190368 MsG0880043944.01.T01:CDS
ATGATGGAAGCTGTGTTATT+TGG 0.213605 8:+33193395 MsG0880043944.01.T01:CDS
GCTACCACTTCTTCAGAAAA+TGG 0.241180 8:-33194755 None:intergenic
TTTATATTCATGCAGGTAAA+AGG 0.246231 8:+33194542 MsG0880043944.01.T01:intron
TCCTCGATCTCTTTGAAATC+AGG 0.297441 8:-33194393 None:intergenic
ATATATAAATATTATTGATT+TGG 0.298762 8:+33195347 MsG0880043944.01.T01:three_prime_UTR
AATGCTCTAACTTCATCTTT+TGG 0.301792 8:-33194012 None:intergenic
CTCACCATCACCACTGAAAC+AGG 0.303756 8:-33194160 None:intergenic
AAATATTCTTCAATCACTTC+TGG 0.306044 8:-33190366 None:intergenic
AGAGAAGGTGTTGGAGTTGC+AGG 0.309684 8:+33195091 MsG0880043944.01.T01:CDS
AAATCAATAATATTTATATA+TGG 0.314475 8:-33195345 None:intergenic
ATATCAGAGTCGCTGAAATT+AGG 0.314497 8:-33194617 None:intergenic
TGTGTGGCATAGTTTATATA+TGG 0.322659 8:+33194334 MsG0880043944.01.T01:CDS
GGTGATGGTGAGTGGGTTGT+TGG 0.322858 8:+33194171 MsG0880043944.01.T01:CDS
AATGTTATTAATTATGGTTT+TGG 0.326093 8:+33190314 None:intergenic
CCAGTTCTCAATGTACTCTT+TGG 0.342536 8:-33194358 None:intergenic
TGCCAAGCAGAGAGATGATT+TGG 0.342619 8:-33193629 None:intergenic
TGATGGTTTGCTAGAGTTTG+AGG 0.344638 8:-33195132 None:intergenic
AAAAGCCTGTCTTCCTGTTC+AGG 0.349780 8:-33194689 None:intergenic
TAGATAGTTCTTCGAAGATT+GGG 0.351030 8:+33194711 MsG0880043944.01.T01:CDS
GATGCCACGCTAAATCAATA+AGG 0.351990 8:-33194281 None:intergenic
ATCAACAAAAGATTTAGTTT+TGG 0.356149 8:-33195159 None:intergenic
CGTCGTGGTACCCTTCTTGC+TGG 0.363760 8:+33190423 MsG0880043944.01.T01:CDS
TTAGATAGTTCTTCGAAGAT+TGG 0.374218 8:+33194710 MsG0880043944.01.T01:CDS
TTTACTAGCTCGTCTTCATC+CGG 0.374685 8:+33193600 MsG0880043944.01.T01:CDS
TGATGGAAGCTGTGTTATTT+GGG 0.380302 8:+33193396 MsG0880043944.01.T01:CDS
GAGGACCTCGGTGATCTAAA+TGG 0.385971 8:+33194048 MsG0880043944.01.T01:CDS
GAACCCTTGTTGCGTGAGAC+AGG 0.398687 8:-33193748 None:intergenic
TGTTCAATATTCTCAGATGT+TGG 0.399633 8:-33195414 None:intergenic
GTTCAATATTCTCAGATGTT+GGG 0.400602 8:-33195413 None:intergenic
CGTGGCATGGTTCCTATCTC+TGG 0.405425 8:+33193889 MsG0880043944.01.T01:CDS
ACACTTTGACCAACAGATAC+TGG 0.418196 8:-33193479 None:intergenic
CATTCCCGATGTTCCTGAAC+AGG 0.418512 8:+33194676 MsG0880043944.01.T01:CDS
GTGTTTAAGTCAACAATCAT+TGG 0.420732 8:-33193670 None:intergenic
GGGCTTCCTTAGGCCCTTCA+AGG 0.426153 8:-33194260 None:intergenic
CTTGTAATTGACAGTAAAGA+TGG 0.434768 8:+33193859 MsG0880043944.01.T01:CDS
ACATCGGGAATGGGAGATAC+TGG 0.437003 8:-33194665 None:intergenic
ACTACTGAACCACCAGAGAT+AGG 0.439225 8:-33193901 None:intergenic
TTGTTGCGTGAGACAGGGTT+TGG 0.440027 8:-33193742 None:intergenic
TTACTAGCTCGTCTTCATCC+GGG 0.444533 8:+33193601 MsG0880043944.01.T01:CDS
GGGATGTCTTGAGTGGTAAA+AGG 0.450323 8:+33193548 MsG0880043944.01.T01:CDS
CTCCAAATCATCTCTCTGCT+TGG 0.452595 8:+33193627 MsG0880043944.01.T01:CDS
GATGAAGACGAGCTAGTAAA+GGG 0.459913 8:-33193597 None:intergenic
TCTGAAGAAGTGGTAGCAAA+TGG 0.462090 8:+33194761 MsG0880043944.01.T01:CDS
CTGTTCAGGAACATCGGGAA+TGG 0.462989 8:-33194675 None:intergenic
AAATGAGGAGTATGTGGAGC+GGG 0.463206 8:+33194416 MsG0880043944.01.T01:CDS
GATGGTGAGTGGGTTGTTGG+TGG 0.464886 8:+33194174 MsG0880043944.01.T01:CDS
AGAGAAACAGACACAACAAT+TGG 0.468488 8:-33194312 None:intergenic
CATGCCTCAAGTCCACTTGA+AGG 0.471872 8:+33194797 MsG0880043944.01.T01:CDS
GAGAGCACAAGATTTACATA+TGG 0.478073 8:+33194211 MsG0880043944.01.T01:CDS
TCTTCCTGTTCAGGAACATC+GGG 0.478248 8:-33194680 None:intergenic
GAATCAGCTGGCTGCAATGA+TGG 0.479058 8:+33193379 MsG0880043944.01.T01:intron
CATCTTGTGAAAATCCTTGA+AGG 0.482006 8:+33194246 MsG0880043944.01.T01:CDS
CCAAAGAGTACATTGAGAAC+TGG 0.483830 8:+33194358 MsG0880043944.01.T01:CDS
GTATGGAAACCTGGTTTATG+TGG 0.490370 8:+33193816 MsG0880043944.01.T01:CDS
ATGCAATCACGAAGGTGCAC+TGG 0.494469 8:+33194130 MsG0880043944.01.T01:CDS
GTGTGGCATAGTTTATATAT+GGG 0.499239 8:+33194335 MsG0880043944.01.T01:CDS
TTGAAGAATATTTGGAACAT+GGG 0.501031 8:+33190376 MsG0880043944.01.T01:CDS
TGTTCAGGAACATCGGGAAT+GGG 0.501740 8:-33194674 None:intergenic
TCACATACATTATCAGTGTC+AGG 0.503744 8:-33194459 None:intergenic
GACACAACAATTGGACGTAC+AGG 0.508623 8:-33194303 None:intergenic
CGAGGAAAATGAGGAGTATG+TGG 0.510864 8:+33194410 MsG0880043944.01.T01:CDS
TGAAGAACATTGTATTCAGC+AGG 0.511366 8:+33193923 MsG0880043944.01.T01:CDS
ATGCCACGCTAAATCAATAA+GGG 0.511908 8:-33194280 None:intergenic
GTGATTTATACCAGCAAGAA+GGG 0.516411 8:-33190433 None:intergenic
AACATTGTATTCAGCAGGAA+TGG 0.517859 8:+33193928 MsG0880043944.01.T01:CDS
GAGACAGGGTTTGGTCCACT+TGG 0.523067 8:-33193733 None:intergenic
TCACGCAACAAGGGTTCTGA+TGG 0.523362 8:+33193754 MsG0880043944.01.T01:CDS
AAATCAATAAGGGCTTCCTT+AGG 0.523475 8:-33194270 None:intergenic
AATATTCTCAGATGTTGGGT+TGG 0.525077 8:-33195409 None:intergenic
GGATGAAGACGAGCTAGTAA+AGG 0.525546 8:-33193598 None:intergenic
CAAAGAGATCGAGGAAAATG+AGG 0.531580 8:+33194401 MsG0880043944.01.T01:CDS
AACTCCAACACCTTCTCTGA+TGG 0.531649 8:-33195086 None:intergenic
GTCTTCCTGTTCAGGAACAT+CGG 0.532676 8:-33194681 None:intergenic
ATTGAAGAATATTTGGAACA+TGG 0.536169 8:+33190375 MsG0880043944.01.T01:CDS
TTAATATACAGCAAGACCAT+TGG 0.540125 8:+33195456 MsG0880043944.01.T01:three_prime_UTR
CTCCCATCACCAGTATCTGT+TGG 0.544928 8:+33193470 MsG0880043944.01.T01:CDS
GTTTCAGTGGTGATGGTGAG+TGG 0.544950 8:+33194163 MsG0880043944.01.T01:CDS
CAAGCAGAGAGATGATTTGG+AGG 0.545050 8:-33193626 None:intergenic
TTTCAGTGGTGATGGTGAGT+GGG 0.548952 8:+33194164 MsG0880043944.01.T01:CDS
ATGTTCCTGAACAGGAAGAC+AGG 0.551829 8:+33194684 MsG0880043944.01.T01:CDS
AGAGCACAAGATTTACATAT+GGG 0.555323 8:+33194212 MsG0880043944.01.T01:CDS
AGTGATTTATACCAGCAAGA+AGG 0.555383 8:-33190434 None:intergenic
TGACCAACAGATACTGGTGA+TGG 0.555644 8:-33193473 None:intergenic
GAAAATCCTTGAAGGGCCTA+AGG 0.556664 8:+33194254 MsG0880043944.01.T01:CDS
AACCCTTGTTGCGTGAGACA+GGG 0.563354 8:-33193747 None:intergenic
GTTGAGAAGTTGAAGGCTGC+AGG 0.565739 8:+33194072 MsG0880043944.01.T01:CDS
GTTGTGTCTGTTTCTCTGTG+TGG 0.566133 8:+33194318 MsG0880043944.01.T01:CDS
TACTAGCTCGTCTTCATCCG+GGG 0.567258 8:+33193602 MsG0880043944.01.T01:CDS
CTTCAAGTGGACTTGAGGCA+TGG 0.571372 8:-33194796 None:intergenic
AGATAGTTCTTCGAAGATTG+GGG 0.573049 8:+33194712 MsG0880043944.01.T01:CDS
AAACCCTGTCTCACGCAACA+AGG 0.574516 8:+33193744 MsG0880043944.01.T01:CDS
ATTGGGGACAGCAATAACTC+TGG 0.576784 8:+33194728 MsG0880043944.01.T01:CDS
TGGAAGGCACCCTGTTTCAG+TGG 0.579970 8:+33194150 MsG0880043944.01.T01:CDS
ATTTACATATGGGATAGAGC+TGG 0.580981 8:+33194222 MsG0880043944.01.T01:CDS
TCTGCTGTCATTCATCAGAC+AGG 0.583056 8:-33195217 None:intergenic
ATTACCTTCAAGTGGACTTG+AGG 0.584311 8:-33194801 None:intergenic
ATTATTTACAGATGATGCTG+TGG 0.585458 8:+33195037 MsG0880043944.01.T01:intron
GCACCCTGTTTCAGTGGTGA+TGG 0.586075 8:+33194156 MsG0880043944.01.T01:CDS
TCGAGTTTCCCACATAAACC+AGG 0.588345 8:-33193825 None:intergenic
AAATGGTGTTGAGAAGTTGA+AGG 0.591187 8:+33194065 MsG0880043944.01.T01:CDS
ATCTGATGTCAATGAAGATG+AGG 0.592161 8:+33194565 MsG0880043944.01.T01:CDS
GTTGGTGGTTCTGCTAGCAA+AGG 0.593351 8:+33194189 MsG0880043944.01.T01:CDS
GGCGTGACATTACCTTCAAG+TGG 0.593844 8:-33194809 None:intergenic
TGGGAACAAGAATTAAAAGA+AGG 0.594470 8:+33195057 MsG0880043944.01.T01:CDS
TTACTAAAACATGCAGCAGT+AGG 0.595182 8:-33193793 None:intergenic
AAATAAGTGCAACAAATGTG+TGG 0.597473 8:-33195489 None:intergenic
ATCTTGTGAAAATCCTTGAA+GGG 0.602213 8:+33194247 MsG0880043944.01.T01:CDS
ACATGCAGCAGTAGGTGTGA+AGG 0.605285 8:-33193785 None:intergenic
GAAACCATCAGAGAAGGTGT+TGG 0.608768 8:+33195082 MsG0880043944.01.T01:CDS
AGATGGTGAGGTGCGTGGCA+TGG 0.609126 8:+33193876 MsG0880043944.01.T01:CDS
TATGGAAACCTGGTTTATGT+GGG 0.609917 8:+33193817 MsG0880043944.01.T01:CDS
TCCTGATTTCAAAGAGATCG+AGG 0.611456 8:+33194392 MsG0880043944.01.T01:CDS
GGCATGGTTCCTATCTCTGG+TGG 0.613251 8:+33193892 MsG0880043944.01.T01:CDS
TGACAAGTCGTTATCCCTGT+GGG 0.614779 8:+33193528 MsG0880043944.01.T01:CDS
TACCACTCAAGACATCCCAC+AGG 0.615382 8:-33193543 None:intergenic
AACCCTGTCTCACGCAACAA+GGG 0.615851 8:+33193745 MsG0880043944.01.T01:CDS
AGAGATGATTTGGAGGACCC+CGG 0.619630 8:-33193619 None:intergenic
CAGCGACTCTGATATGTCTG+AGG 0.619753 8:+33194625 MsG0880043944.01.T01:CDS
TGACATTGTGACAGTCGAGA+AGG 0.620507 8:+33194592 MsG0880043944.01.T01:CDS
AAGGCGGAAACCATCAGAGA+AGG 0.621405 8:+33195076 MsG0880043944.01.T01:CDS
GACCAACAGATACTGGTGAT+GGG 0.623388 8:-33193472 None:intergenic
GATGTTGAAGATCCGTTGCA+AGG 0.623904 8:+33190336 MsG0880043944.01.T01:CDS
CTGACAAGTCGTTATCCCTG+TGG 0.627369 8:+33193527 MsG0880043944.01.T01:CDS
GTTTATGTGGGAAACTCGAA+AGG 0.631466 8:+33193829 MsG0880043944.01.T01:CDS
TGATTGCATCTTGAAACTCA+CGG 0.633891 8:-33194116 None:intergenic
ATCATTGGAGCACATGAGAG+AGG 0.635797 8:-33193655 None:intergenic
TCTGGAAAATCACCTTGCAA+CGG 0.637632 8:-33190348 None:intergenic
TTATTTACAGATGATGCTGT+GGG 0.638305 8:+33195038 MsG0880043944.01.T01:intron
TGTATTGCTTTCAATCGTCG+TGG 0.644491 8:+33190408 MsG0880043944.01.T01:CDS
GAACAAGAATTAAAAGAAGG+CGG 0.644668 8:+33195060 MsG0880043944.01.T01:CDS
TCCCTGTGGGATGTCTTGAG+TGG 0.645082 8:+33193541 MsG0880043944.01.T01:CDS
AAAATGAGGAGTATGTGGAG+CGG 0.646092 8:+33194415 MsG0880043944.01.T01:CDS
TCTGTCTCTGACAAACCAAG+TGG 0.648181 8:+33193718 MsG0880043944.01.T01:CDS
AAGCCCTTATTGATTTAGCG+TGG 0.655079 8:+33194277 MsG0880043944.01.T01:CDS
TGCAGCAGTAGGTGTGAAGG+AGG 0.657772 8:-33193782 None:intergenic
AATCACGAAGGTGCACTGGA+AGG 0.658692 8:+33194134 MsG0880043944.01.T01:CDS
TCACCATCACCACTGAAACA+GGG 0.666315 8:-33194159 None:intergenic
GCTGAACTGAACGAGGACCT+CGG 0.667278 8:+33194036 MsG0880043944.01.T01:CDS
AGTATCTGTTGGTCAAAGTG+TGG 0.668744 8:+33193481 MsG0880043944.01.T01:CDS
AGCATTAGCTGAACTGAACG+AGG 0.670935 8:+33194029 MsG0880043944.01.T01:CDS
ACCACTCAAGACATCCCACA+GGG 0.671936 8:-33193542 None:intergenic
AGTAAAGATGGTGAGGTGCG+TGG 0.690847 8:+33193871 MsG0880043944.01.T01:CDS
AATTGACAGTAAAGATGGTG+AGG 0.704790 8:+33193864 MsG0880043944.01.T01:CDS
ATGAAGACGAGCTAGTAAAG+GGG 0.710400 8:-33193596 None:intergenic
GTTTCAAGATGCAATCACGA+AGG 0.735993 8:+33194122 MsG0880043944.01.T01:CDS
CAACACCATTTAGATCACCG+AGG 0.780016 8:-33194053 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTATGTAAAATTTAAA+GGG + Chr8:33190865-33190884 MsG0880043944.01.T01:intron 10.0%
!! TTGTATTATGTAAAATTTAA+AGG + Chr8:33190864-33190883 MsG0880043944.01.T01:intron 10.0%
!!! AAATTTGATTTTTTATCTTA+GGG + Chr8:33190559-33190578 MsG0880043944.01.T01:intron 10.0%
!!! TTTTTTTTTTAAAAACTTCT+TGG + Chr8:33192149-33192168 MsG0880043944.01.T01:intron 10.0%
!! CTTAAAACTTTACTTTATAA+TGG + Chr8:33191302-33191321 MsG0880043944.01.T01:intron 15.0%
!! GTTTATTTCAAAAAATCATT+AGG + Chr8:33192946-33192965 MsG0880043944.01.T01:intron 15.0%
!! TAATAATGAACTTTGATTAT+TGG + Chr8:33192224-33192243 MsG0880043944.01.T01:intron 15.0%
!!! AAATTCTAGCATTTTAATTT+GGG + Chr8:33191801-33191820 MsG0880043944.01.T01:intron 15.0%
!!! AATATATTTATTTTCCTAGT+GGG + Chr8:33193143-33193162 MsG0880043944.01.T01:intron 15.0%
!!! CAAATTTGATTTTTTATCTT+AGG + Chr8:33190558-33190577 MsG0880043944.01.T01:intron 15.0%
!!! GTATTTAATTTGTATATGTA+AGG + Chr8:33192444-33192463 MsG0880043944.01.T01:intron 15.0%
!!! GTGTTTTTTATTTTATTTCA+GGG + Chr8:33190700-33190719 MsG0880043944.01.T01:intron 15.0%
!!! TAAATTCTAGCATTTTAATT+TGG + Chr8:33191800-33191819 MsG0880043944.01.T01:intron 15.0%
!!! TAATATATTTATTTTCCTAG+TGG + Chr8:33193142-33193161 MsG0880043944.01.T01:intron 15.0%
!!! TGTGTTTTTTATTTTATTTC+AGG + Chr8:33190699-33190718 MsG0880043944.01.T01:intron 15.0%
!!! TGTTTTTTATTTTATTTCAG+GGG + Chr8:33190701-33190720 MsG0880043944.01.T01:intron 15.0%
!!! TTTTTTGAAATAAACAAAGT+TGG - Chr8:33192941-33192960 None:intergenic 15.0%
!! AACAGTTCAATTGAAAAATA+GGG - Chr8:33194878-33194897 None:intergenic 20.0%
!! AAGCTATTACTTTACTATAA+TGG + Chr8:33192186-33192205 MsG0880043944.01.T01:intron 20.0%
!! CATCCAGTAAAAATAATATT+TGG - Chr8:33190633-33190652 None:intergenic 20.0%
!! TAAAATTATAAGGTTATTCG+AGG + Chr8:33190741-33190760 MsG0880043944.01.T01:intron 20.0%
!! TATAGTAAAGTAATAGCTTA+GGG - Chr8:33192185-33192204 None:intergenic 20.0%
!! TATGGAAAGTAAAAAGATAT+TGG + Chr8:33192866-33192885 MsG0880043944.01.T01:intron 20.0%
!! TGAAAAATAACAAAAGATCA+TGG - Chr8:33191934-33191953 None:intergenic 20.0%
!! TTATAGTAAAGTAATAGCTT+AGG - Chr8:33192186-33192205 None:intergenic 20.0%
!! TTTCAAACCAACATAAAAAA+GGG - Chr8:33190773-33190792 None:intergenic 20.0%
!!! AATATTATTTTTACTGGATG+TGG + Chr8:33190633-33190652 MsG0880043944.01.T01:intron 20.0%
!!! AGTGATATCAAATTTTTTGA+TGG - Chr8:33190994-33191013 None:intergenic 20.0%
!!! ATCAACAAAAGATTTAGTTT+TGG - Chr8:33195162-33195181 None:intergenic 20.0%
!!! TTATACTCAGATACTTTTTA+TGG - Chr8:33193125-33193144 None:intergenic 20.0%
!!! TTCTTTTCTTTTCCATTTTA+TGG + Chr8:33194508-33194527 MsG0880043944.01.T01:intron 20.0%
!!! TTGCCAAATATTATTTTTAC+TGG + Chr8:33190627-33190646 MsG0880043944.01.T01:intron 20.0%
!!! TTTGTCTTTTTATCATAAAC+CGG - Chr8:33190542-33190561 None:intergenic 20.0%
!!! TTTTCAAACCAACATAAAAA+AGG - Chr8:33190774-33190793 None:intergenic 20.0%
!!! TTTTTTTAAAAACTTCTTGG+TGG + Chr8:33192152-33192171 MsG0880043944.01.T01:intron 20.0%
! AAAATTTGATATCACTGTGA+CGG + Chr8:33190998-33191017 MsG0880043944.01.T01:intron 25.0%
! AAATATTCTTCAATCACTTC+TGG - Chr8:33190369-33190388 None:intergenic 25.0%
! AACAAACACAATATTCAGTA+AGG - Chr8:33191523-33191542 None:intergenic 25.0%
! ACAAACACAATATTCAGTAA+GGG - Chr8:33191522-33191541 None:intergenic 25.0%
! ACATAGATCTTACACAATAT+TGG + Chr8:33192421-33192440 MsG0880043944.01.T01:intron 25.0%
! AGAAGTGATTGAAGAATATT+TGG + Chr8:33190368-33190387 MsG0880043944.01.T01:CDS 25.0%
! ATGAAGAATCCAAAATTACA+CGG + Chr8:33190664-33190683 MsG0880043944.01.T01:intron 25.0%
! ATTTGATAAATTGAATCAGC+TGG + Chr8:33193367-33193386 MsG0880043944.01.T01:intron 25.0%
! CAAATAAAAAACAGTGTGAA+TGG - Chr8:33191277-33191296 None:intergenic 25.0%
! CAACAGTTCAATTGAAAAAT+AGG - Chr8:33194879-33194898 None:intergenic 25.0%
! CATAGATCTTACACAATATT+GGG + Chr8:33192422-33192441 MsG0880043944.01.T01:intron 25.0%
! TCATCTGTAAATAATGTTGA+AGG - Chr8:33195032-33195051 None:intergenic 25.0%
! TCATTGCATTACAATAGAAT+TGG - Chr8:33192800-33192819 None:intergenic 25.0%
! TCTATATCACATTGATACTA+GGG + Chr8:33192721-33192740 MsG0880043944.01.T01:intron 25.0%
! TTTATATTCATGCAGGTAAA+AGG + Chr8:33194542-33194561 MsG0880043944.01.T01:intron 25.0%
!! ATAGTTTTCTGTATGATATC+CGG + Chr8:33192698-33192717 MsG0880043944.01.T01:intron 25.0%
!! ATTGAAGAATATTTGGAACA+TGG + Chr8:33190375-33190394 MsG0880043944.01.T01:CDS 25.0%
!! TCCAACATTTTTCCTAATTA+GGG - Chr8:33192482-33192501 None:intergenic 25.0%
!! TGTTACAAGCATATTTTGTA+TGG - Chr8:33194833-33194852 None:intergenic 25.0%
!! TTGAAGAATATTTGGAACAT+GGG + Chr8:33190376-33190395 MsG0880043944.01.T01:CDS 25.0%
!! TTGCTATTGATATGATTGTA+TGG + Chr8:33192848-33192867 MsG0880043944.01.T01:intron 25.0%
!!! AAATTTAAAGGGTTTTATCG+AGG + Chr8:33190876-33190895 MsG0880043944.01.T01:intron 25.0%
!!! ATAACCTTATAATTTTAGCG+AGG - Chr8:33190738-33190757 None:intergenic 25.0%
!!! CATTCACACTGTTTTTTATT+TGG + Chr8:33191275-33191294 MsG0880043944.01.T01:intron 25.0%
!!! TTCATTAAACTTTGAAGTAG+TGG + Chr8:33192328-33192347 MsG0880043944.01.T01:intron 25.0%
AACCAAGTTTATATTCATGC+AGG + Chr8:33194535-33194554 MsG0880043944.01.T01:intron 30.0%
ACTTGGTTAAGACCATAAAA+TGG - Chr8:33194523-33194542 None:intergenic 30.0%
AGAGCACAAGATTTACATAT+GGG + Chr8:33194212-33194231 MsG0880043944.01.T01:CDS 30.0%
AGGGGGAAAAAAAAAAAAAG+AGG + Chr8:33191607-33191626 MsG0880043944.01.T01:intron 30.0%
AGTATCAATGTGATATAGAC+CGG - Chr8:33192720-33192739 None:intergenic 30.0%
ATCTATGTGTTCATGAAGAA+CGG - Chr8:33192409-33192428 None:intergenic 30.0%
ATCTTGTGAAAATCCTTGAA+GGG + Chr8:33194247-33194266 MsG0880043944.01.T01:CDS 30.0%
ATTATTTACAGATGATGCTG+TGG + Chr8:33195037-33195056 MsG0880043944.01.T01:intron 30.0%
CTTCACATTGTATAGAATTG+TGG + Chr8:33190924-33190943 MsG0880043944.01.T01:intron 30.0%
CTTGTAATTGACAGTAAAGA+TGG + Chr8:33193859-33193878 MsG0880043944.01.T01:CDS 30.0%
GAACAAGAATTAAAAGAAGG+CGG + Chr8:33195060-33195079 MsG0880043944.01.T01:CDS 30.0%
GAAGAAACCTAAACTCATAA+CGG - Chr8:33194917-33194936 None:intergenic 30.0%
GTCTATATCACATTGATACT+AGG + Chr8:33192720-33192739 MsG0880043944.01.T01:intron 30.0%
GTGTGGCATAGTTTATATAT+GGG + Chr8:33194335-33194354 MsG0880043944.01.T01:CDS 30.0%
GTGTTTAAGTCAACAATCAT+TGG - Chr8:33193673-33193692 None:intergenic 30.0%
GTTCAATATTCTCAGATGTT+GGG - Chr8:33195416-33195435 None:intergenic 30.0%
GTTTGAACCATTTGAAAACT+CGG + Chr8:33191032-33191051 MsG0880043944.01.T01:intron 30.0%
TAATGTATGTGAGCGTTATA+TGG + Chr8:33194470-33194489 MsG0880043944.01.T01:intron 30.0%
TACCTGCATGAATATAAACT+TGG - Chr8:33194540-33194559 None:intergenic 30.0%
TAGATAGTTCTTCGAAGATT+GGG + Chr8:33194711-33194730 MsG0880043944.01.T01:CDS 30.0%
TATAGCCATAAATCTGCAAT+TGG - Chr8:33192513-33192532 None:intergenic 30.0%
TATAGCTGTATAGTGTGTAA+CGG - Chr8:33192359-33192378 None:intergenic 30.0%
TGAAGAATCCAAAATTACAC+GGG + Chr8:33190665-33190684 MsG0880043944.01.T01:intron 30.0%
TGGGAACAAGAATTAAAAGA+AGG + Chr8:33195057-33195076 MsG0880043944.01.T01:CDS 30.0%
TGTGTGGCATAGTTTATATA+TGG + Chr8:33194334-33194353 MsG0880043944.01.T01:CDS 30.0%
TGTGTTGCATGTAATCTATT+TGG + Chr8:33193068-33193087 MsG0880043944.01.T01:intron 30.0%
TGTTCAATATTCTCAGATGT+TGG - Chr8:33195417-33195436 None:intergenic 30.0%
TTAATATACAGCAAGACCAT+TGG + Chr8:33195456-33195475 MsG0880043944.01.T01:three_prime_UTR 30.0%
TTAGATAGTTCTTCGAAGAT+TGG + Chr8:33194710-33194729 MsG0880043944.01.T01:CDS 30.0%
TTATTCCTTGTAGCAAATAG+CGG + Chr8:33191138-33191157 MsG0880043944.01.T01:intron 30.0%
TTATTTACAGATGATGCTGT+GGG + Chr8:33195038-33195057 MsG0880043944.01.T01:intron 30.0%
TTGTATATGTAAGGTCGATT+TGG + Chr8:33192453-33192472 MsG0880043944.01.T01:intron 30.0%
TTTGAACCATTTGAAAACTC+GGG + Chr8:33191033-33191052 MsG0880043944.01.T01:intron 30.0%
! AATGCTCTAACTTCATCTTT+TGG - Chr8:33194015-33194034 None:intergenic 30.0%
! ATTTCAGGTGTAGTATTAGT+GGG + Chr8:33193171-33193190 MsG0880043944.01.T01:intron 30.0%
! CAAGAATGACAATAAGTTGA+GGG - Chr8:33192113-33192132 None:intergenic 30.0%
! CTCCAACATTTTTCCTAATT+AGG - Chr8:33192483-33192502 None:intergenic 30.0%
! TATACCTTTATCCTGTTTTC+TGG + Chr8:33192773-33192792 MsG0880043944.01.T01:intron 30.0%
! TCAAATTCTGAGAACAACAT+GGG - Chr8:33194940-33194959 None:intergenic 30.0%
! TTAGCAAATTTTCATCAGGT+GGG + Chr8:33195316-33195335 MsG0880043944.01.T01:three_prime_UTR 30.0%
! TTCAAATTCTGAGAACAACA+TGG - Chr8:33194941-33194960 None:intergenic 30.0%
! TTGCTTAGCAAATTTTCATC+AGG + Chr8:33195312-33195331 MsG0880043944.01.T01:three_prime_UTR 30.0%
! TTTTAGTAAGTATGGAAACC+TGG + Chr8:33193807-33193826 MsG0880043944.01.T01:CDS 30.0%
!! AAAGATATTGGTTCTGTCAA+TGG + Chr8:33192878-33192897 MsG0880043944.01.T01:intron 30.0%
!! AATAACTTGAGGGCATATTT+TGG - Chr8:33191253-33191272 None:intergenic 30.0%
!! AATGAAGTCTGCTGATTTAA+GGG + Chr8:33191588-33191607 MsG0880043944.01.T01:intron 30.0%
!! TAATGAAGTCTGCTGATTTA+AGG + Chr8:33191587-33191606 MsG0880043944.01.T01:intron 30.0%
!! TTTGTGCTGGTTTGAAAAAA+TGG + Chr8:33190474-33190493 MsG0880043944.01.T01:intron 30.0%
!!! GATTTAGTTTTGGTTCTTGA+TGG - Chr8:33195152-33195171 None:intergenic 30.0%
!!! GTATTAGCCCTTTTTTATGT+TGG + Chr8:33190763-33190782 MsG0880043944.01.T01:intron 30.0%
!!! TATTTGGGATTTTGAAGTCA+GGG + Chr8:33193411-33193430 MsG0880043944.01.T01:CDS 30.0%
!!! TTATTTGGGATTTTGAAGTC+AGG + Chr8:33193410-33193429 MsG0880043944.01.T01:CDS 30.0%
AAAAACACACCAAAATGGGT+AGG - Chr8:33191371-33191390 None:intergenic 35.0%
AAAGTAATAGCTTAGGGACA+AGG - Chr8:33192179-33192198 None:intergenic 35.0%
AAATCAATAAGGGCTTCCTT+AGG - Chr8:33194273-33194292 None:intergenic 35.0%
AACATTGTATTCAGCAGGAA+TGG + Chr8:33193928-33193947 MsG0880043944.01.T01:CDS 35.0%
AACTGTTGAAACACTTTGTG+AGG + Chr8:33194891-33194910 MsG0880043944.01.T01:intron 35.0%
AAGTGCATGAAGGAAATACA+AGG - Chr8:33191546-33191565 None:intergenic 35.0%
AAGTTGGATTATCGTAAACG+AGG - Chr8:33192925-33192944 None:intergenic 35.0%
AATATTCTCAGATGTTGGGT+TGG - Chr8:33195412-33195431 None:intergenic 35.0%
AATTGACAGTAAAGATGGTG+AGG + Chr8:33193864-33193883 MsG0880043944.01.T01:CDS 35.0%
ACAGGAAAAACACACCAAAA+TGG - Chr8:33191376-33191395 None:intergenic 35.0%
AGATAGTTCTTCGAAGATTG+GGG + Chr8:33194712-33194731 MsG0880043944.01.T01:CDS 35.0%
AGCTTGAATCTAGACTTGAT+TGG + Chr8:33191665-33191684 MsG0880043944.01.T01:intron 35.0%
AGTAACATGAGTGAGAAAGT+TGG - Chr8:33193345-33193364 None:intergenic 35.0%
AGTGATTTATACCAGCAAGA+AGG - Chr8:33190437-33190456 None:intergenic 35.0%
ATAATGTAGTAACACACGCA+TGG - Chr8:33192293-33192312 None:intergenic 35.0%
ATAGAATTGGACCAGAAAAC+AGG - Chr8:33192787-33192806 None:intergenic 35.0%
ATATCAGAGTCGCTGAAATT+AGG - Chr8:33194620-33194639 None:intergenic 35.0%
ATCTGATGTCAATGAAGATG+AGG + Chr8:33194565-33194584 MsG0880043944.01.T01:CDS 35.0%
ATGAGACCTTACAAGGTAAT+TGG - Chr8:33192601-33192620 None:intergenic 35.0%
ATGCCACGCTAAATCAATAA+GGG - Chr8:33194283-33194302 None:intergenic 35.0%
ATTTACATATGGGATAGAGC+TGG + Chr8:33194222-33194241 MsG0880043944.01.T01:CDS 35.0%
CAACTTATTGTCATTCTTGC+TGG + Chr8:33192114-33192133 MsG0880043944.01.T01:intron 35.0%
CACAATATTCAGTAAGGGAA+AGG - Chr8:33191517-33191536 None:intergenic 35.0%
CACTATACAGCTATAGCATT+TGG + Chr8:33192364-33192383 MsG0880043944.01.T01:intron 35.0%
CAGACCTCGCTAAAATTATA+AGG + Chr8:33190731-33190750 MsG0880043944.01.T01:intron 35.0%
CAGGAAAAACACACCAAAAT+GGG - Chr8:33191375-33191394 None:intergenic 35.0%
CATCTTGTGAAAATCCTTGA+AGG + Chr8:33194246-33194265 MsG0880043944.01.T01:CDS 35.0%
CGACTGCTACAAATGATATT+CGG - Chr8:33192059-33192078 None:intergenic 35.0%
GACAAATCACCAAAAGGTTT+AGG - Chr8:33193039-33193058 None:intergenic 35.0%
GATTGCCAATTGCAGATTTA+TGG + Chr8:33192505-33192524 MsG0880043944.01.T01:intron 35.0%
GCAAGAATGACAATAAGTTG+AGG - Chr8:33192114-33192133 None:intergenic 35.0%
GCCCTAATTAGGAAAAATGT+TGG + Chr8:33192478-33192497 MsG0880043944.01.T01:intron 35.0%
GTGATTTATACCAGCAAGAA+GGG - Chr8:33190436-33190455 None:intergenic 35.0%
TAGTTGGTCAGGAAAGAAAT+AGG + Chr8:33190829-33190848 MsG0880043944.01.T01:intron 35.0%
TATACAGCTATAGCATTTGG+TGG + Chr8:33192367-33192386 MsG0880043944.01.T01:intron 35.0%
TATGGAAACCTGGTTTATGT+GGG + Chr8:33193817-33193836 MsG0880043944.01.T01:CDS 35.0%
TATTCCTCTGCTATGCTATT+TGG - Chr8:33191191-33191210 None:intergenic 35.0%
TCACAAGAACTTCACTATAG+CGG - Chr8:33191227-33191246 None:intergenic 35.0%
TCACATACATTATCAGTGTC+AGG - Chr8:33194462-33194481 None:intergenic 35.0%
TCTCCACACAAAAATTTACC+AGG - Chr8:33191879-33191898 None:intergenic 35.0%
TGAAGAACATTGTATTCAGC+AGG + Chr8:33193923-33193942 MsG0880043944.01.T01:CDS 35.0%
TGATTGCATCTTGAAACTCA+CGG - Chr8:33194119-33194138 None:intergenic 35.0%
TGTGAATGGCAATAACTTGA+GGG - Chr8:33191263-33191282 None:intergenic 35.0%
TTACAAGGTAATTGGACTCT+GGG - Chr8:33192593-33192612 None:intergenic 35.0%
TTACTAAAACATGCAGCAGT+AGG - Chr8:33193796-33193815 None:intergenic 35.0%
! AAATGGTGTTGAGAAGTTGA+AGG + Chr8:33194065-33194084 MsG0880043944.01.T01:CDS 35.0%
! AACAGAGAGTATGCCTAATT+TGG - Chr8:33192543-33192562 None:intergenic 35.0%
! AAGGTTTGAAGTGTATAAGG+AGG + Chr8:33192637-33192656 MsG0880043944.01.T01:intron 35.0%
! AGGTTTGAAGTGTATAAGGA+GGG + Chr8:33192638-33192657 MsG0880043944.01.T01:intron 35.0%
! ATGATGGAAGCTGTGTTATT+TGG + Chr8:33193395-33193414 MsG0880043944.01.T01:CDS 35.0%
! CAAATTCTGAGAACAACATG+GGG - Chr8:33194939-33194958 None:intergenic 35.0%
! CAATAAGTTGAGGGCAAATT+TGG - Chr8:33192104-33192123 None:intergenic 35.0%
! CTTAGCAAATTTTCATCAGG+TGG + Chr8:33195315-33195334 MsG0880043944.01.T01:three_prime_UTR 35.0%
! GAGAGCACAAGATTTACATA+TGG + Chr8:33194211-33194230 MsG0880043944.01.T01:CDS 35.0%
! GATTTCAGGTGTAGTATTAG+TGG + Chr8:33193170-33193189 MsG0880043944.01.T01:intron 35.0%
! GCTATAGTTGATGCCAAATT+AGG + Chr8:33192527-33192546 MsG0880043944.01.T01:intron 35.0%
! GTCAAGGTTTGAAGTGTATA+AGG + Chr8:33192634-33192653 MsG0880043944.01.T01:intron 35.0%
! TGTCAACTACCTAAACCTTT+TGG + Chr8:33193027-33193046 MsG0880043944.01.T01:intron 35.0%
! TTAGTGGGTGTATATCTTTC+TGG + Chr8:33193186-33193205 MsG0880043944.01.T01:intron 35.0%
!! AGAAAAAAGCACCCACAAAT+TGG - Chr8:33191445-33191464 None:intergenic 35.0%
!! ATCACCATTTTCTGAAGAAG+TGG + Chr8:33194751-33194770 MsG0880043944.01.T01:CDS 35.0%
!! ATGAAGTCTGCTGATTTAAG+GGG + Chr8:33191589-33191608 MsG0880043944.01.T01:intron 35.0%
!! TCCACTTAGATTTGGTTCTT+GGG + Chr8:33191405-33191424 MsG0880043944.01.T01:intron 35.0%
!! TCTTTTGTTGATGAGAGCAA+TGG + Chr8:33195170-33195189 MsG0880043944.01.T01:CDS 35.0%
!! TGATGGAAGCTGTGTTATTT+GGG + Chr8:33193396-33193415 MsG0880043944.01.T01:CDS 35.0%
!!! ATTTGGGATTTTGAAGTCAG+GGG + Chr8:33193412-33193431 MsG0880043944.01.T01:CDS 35.0%
!!! GCTGCATGTTTTAGTAAGTA+TGG + Chr8:33193799-33193818 MsG0880043944.01.T01:CDS 35.0%
ACACTTTGACCAACAGATAC+TGG - Chr8:33193482-33193501 None:intergenic 40.0%
ACCTGAAATCTAATCCCACT+AGG - Chr8:33193160-33193179 None:intergenic 40.0%
AGAATCCAAAATTACACGGG+TGG + Chr8:33190668-33190687 MsG0880043944.01.T01:intron 40.0%
AGTATCTGTTGGTCAAAGTG+TGG + Chr8:33193481-33193500 MsG0880043944.01.T01:CDS 40.0%
ATGAAGACGAGCTAGTAAAG+GGG - Chr8:33193599-33193618 None:intergenic 40.0%
ATGTGCACTTTGCAAGTCTT+GGG + Chr8:33191470-33191489 MsG0880043944.01.T01:intron 40.0%
ATGTGGTGTCCACTTAGATT+TGG + Chr8:33191397-33191416 MsG0880043944.01.T01:intron 40.0%
ATTCGGACTGCTATGCTATT+TGG - Chr8:33192042-33192061 None:intergenic 40.0%
ATTTACCAGGCTGCTCTATT+TGG - Chr8:33191866-33191885 None:intergenic 40.0%
CAAAATACCCTTGCTCTAGT+TGG + Chr8:33190813-33190832 MsG0880043944.01.T01:intron 40.0%
CAAAGAGATCGAGGAAAATG+AGG + Chr8:33194401-33194420 MsG0880043944.01.T01:CDS 40.0%
CAGAGTCCAATTACCTTGTA+AGG + Chr8:33192592-33192611 MsG0880043944.01.T01:intron 40.0%
CATTTCTGCAGTTTCTGTCA+AGG + Chr8:33192618-33192637 MsG0880043944.01.T01:intron 40.0%
CCAGTTCTCAATGTACTCTT+TGG - Chr8:33194361-33194380 None:intergenic 40.0%
CTGTATAGTGTGTAACGGTA+AGG - Chr8:33192354-33192373 None:intergenic 40.0%
CTTACAAGGTAATTGGACTC+TGG - Chr8:33192594-33192613 None:intergenic 40.0%
GATGAAGACGAGCTAGTAAA+GGG - Chr8:33193600-33193619 None:intergenic 40.0%
GATGCCACGCTAAATCAATA+AGG - Chr8:33194284-33194303 None:intergenic 40.0%
GCCTATCTCTGTAGTCAAAA+CGG + Chr8:33191977-33191996 MsG0880043944.01.T01:intron 40.0%
GCTACCACTTCTTCAGAAAA+TGG - Chr8:33194758-33194777 None:intergenic 40.0%
GGGTTTCTGCTAATGATTGT+GGG + Chr8:33191053-33191072 MsG0880043944.01.T01:intron 40.0%
GTATGGAAACCTGGTTTATG+TGG + Chr8:33193816-33193835 MsG0880043944.01.T01:CDS 40.0%
GTGTGAATGGCAATAACTTG+AGG - Chr8:33191264-33191283 None:intergenic 40.0%
GTTTATGTGGGAAACTCGAA+AGG + Chr8:33193829-33193848 MsG0880043944.01.T01:CDS 40.0%
GTTTCAAGATGCAATCACGA+AGG + Chr8:33194122-33194141 MsG0880043944.01.T01:CDS 40.0%
TATGTGTTCATGAAGAACGG+CGG - Chr8:33192406-33192425 None:intergenic 40.0%
TCCTAGTGGGATTAGATTTC+AGG + Chr8:33193156-33193175 MsG0880043944.01.T01:intron 40.0%
TCCTGATTTCAAAGAGATCG+AGG + Chr8:33194392-33194411 MsG0880043944.01.T01:CDS 40.0%
TCTGAAGAAGTGGTAGCAAA+TGG + Chr8:33194761-33194780 MsG0880043944.01.T01:CDS 40.0%
TCTGGAAAATCACCTTGCAA+CGG - Chr8:33190351-33190370 None:intergenic 40.0%
TGCAGAAATGAGACCTTACA+AGG - Chr8:33192608-33192627 None:intergenic 40.0%
TGGACCAGAAAACAGGATAA+AGG - Chr8:33192780-33192799 None:intergenic 40.0%
TGTATTGCTTTCAATCGTCG+TGG + Chr8:33190408-33190427 MsG0880043944.01.T01:CDS 40.0%
TGTGAGCGTTATATGGTCAT+AGG + Chr8:33194477-33194496 MsG0880043944.01.T01:intron 40.0%
TTTACTAGCTCGTCTTCATC+CGG + Chr8:33193600-33193619 MsG0880043944.01.T01:CDS 40.0%
TTTGACTACAGAGATAGGCT+TGG - Chr8:33191976-33191995 None:intergenic 40.0%
! AAAATGAGGAGTATGTGGAG+CGG + Chr8:33194415-33194434 MsG0880043944.01.T01:CDS 40.0%
! AGATTCCACCCGTGTAATTT+TGG - Chr8:33190676-33190695 None:intergenic 40.0%
! AGCGGTTTTTGTCCAATTTG+TGG + Chr8:33191430-33191449 MsG0880043944.01.T01:intron 40.0%
! ATTACCTTCAAGTGGACTTG+AGG - Chr8:33194804-33194823 None:intergenic 40.0%
! CAGAAACCCGAGTTTTCAAA+TGG - Chr8:33191042-33191061 None:intergenic 40.0%
! CAGCCTGGTAAATTTTTGTG+TGG + Chr8:33191873-33191892 MsG0880043944.01.T01:intron 40.0%
! CCAAAGAGTACATTGAGAAC+TGG + Chr8:33194358-33194377 MsG0880043944.01.T01:CDS 40.0%
! GCGGTTTTTGTCCAATTTGT+GGG + Chr8:33191431-33191450 MsG0880043944.01.T01:intron 40.0%
! GCTCTAACTTCATCTTTTGG+TGG - Chr8:33194012-33194031 None:intergenic 40.0%
! GTGTGGATATCTTTTGCCAA+TGG - Chr8:33195475-33195494 None:intergenic 40.0%
! TTAGTGACCGATTTACACTG+CGG + Chr8:33190503-33190522 MsG0880043944.01.T01:intron 40.0%
!! AAGCCCTTATTGATTTAGCG+TGG + Chr8:33194277-33194296 MsG0880043944.01.T01:CDS 40.0%
!! GCTATAGCATTTGGTGGTTT+TGG + Chr8:33192373-33192392 MsG0880043944.01.T01:intron 40.0%
!! GTCCACTTAGATTTGGTTCT+TGG + Chr8:33191404-33191423 MsG0880043944.01.T01:intron 40.0%
!! TCCTCGATCTCTTTGAAATC+AGG - Chr8:33194396-33194415 None:intergenic 40.0%
!! TCGATTTGGTTGCCCTAATT+AGG + Chr8:33192467-33192486 MsG0880043944.01.T01:intron 40.0%
!! TGAAGTCTGCTGATTTAAGG+GGG + Chr8:33191590-33191609 MsG0880043944.01.T01:intron 40.0%
!! TGATGGTTTGCTAGAGTTTG+AGG - Chr8:33195135-33195154 None:intergenic 40.0%
!! TGGCTTTTTCCAATGACGAT+GGG + Chr8:33191767-33191786 MsG0880043944.01.T01:intron 40.0%
!!! CAACTAGAGCAAGGGTATTT+TGG - Chr8:33190815-33190834 None:intergenic 40.0%
!!! GCAGAGTGGATTAGGATTTT+CGG - Chr8:33192571-33192590 None:intergenic 40.0%
!!! TGCACAGCATTTTTTGTGCA+TGG + Chr8:33192016-33192035 MsG0880043944.01.T01:intron 40.0%
AAAAGCCTGTCTTCCTGTTC+AGG - Chr8:33194692-33194711 None:intergenic 45.0%
AAACTCAGTCTCGTAGCAGT+CGG - Chr8:33191698-33191717 None:intergenic 45.0%
AACACACCAAAATGGGTAGG+CGG - Chr8:33191368-33191387 None:intergenic 45.0%
AACTCCAACACCTTCTCTGA+TGG - Chr8:33195089-33195108 None:intergenic 45.0%
AATCCCATACCCGAGTATCA+AGG - Chr8:33192677-33192696 None:intergenic 45.0%
ACTACTGAACCACCAGAGAT+AGG - Chr8:33193904-33193923 None:intergenic 45.0%
ACTCCTTGATACTCGGGTAT+GGG + Chr8:33192671-33192690 MsG0880043944.01.T01:intron 45.0%
AGACCTCGCTCAAATTACAG+GGG - Chr8:33190601-33190620 None:intergenic 45.0%
AGCATTAGCTGAACTGAACG+AGG + Chr8:33194029-33194048 MsG0880043944.01.T01:CDS 45.0%
ATCATTGGAGCACATGAGAG+AGG - Chr8:33193658-33193677 None:intergenic 45.0%
ATGTTCCTGAACAGGAAGAC+AGG + Chr8:33194684-33194703 MsG0880043944.01.T01:CDS 45.0%
ATTGGGGACAGCAATAACTC+TGG + Chr8:33194728-33194747 MsG0880043944.01.T01:CDS 45.0%
CAAATTACAGGGGCTACTTG+AGG - Chr8:33190591-33190610 None:intergenic 45.0%
CAACACCATTTAGATCACCG+AGG - Chr8:33194056-33194075 None:intergenic 45.0%
CACTGTGACGGCAACAATAA+TGG + Chr8:33191010-33191029 MsG0880043944.01.T01:intron 45.0%
CACTTTGCAAGTCTTGGGAT+TGG + Chr8:33191475-33191494 MsG0880043944.01.T01:intron 45.0%
CAGACCTCGCTCAAATTACA+GGG - Chr8:33190602-33190621 None:intergenic 45.0%
CATGTGCACTTTGCAAGTCT+TGG + Chr8:33191469-33191488 MsG0880043944.01.T01:intron 45.0%
CATTCGACCGCAGTGTAAAT+CGG - Chr8:33190513-33190532 None:intergenic 45.0%
CGGGTTTCTGCTAATGATTG+TGG + Chr8:33191052-33191071 MsG0880043944.01.T01:intron 45.0%
CGTGCAGACAAATCACCAAA+AGG - Chr8:33193045-33193064 None:intergenic 45.0%
CTCCAAATCATCTCTCTGCT+TGG + Chr8:33193627-33193646 MsG0880043944.01.T01:CDS 45.0%
CTTCATGCACTTCTTGTGTG+TGG + Chr8:33191554-33191573 MsG0880043944.01.T01:intron 45.0%
GAAAATCCTTGAAGGGCCTA+AGG + Chr8:33194254-33194273 MsG0880043944.01.T01:CDS 45.0%
GACACAACAATTGGACGTAC+AGG - Chr8:33194306-33194325 None:intergenic 45.0%
GACCAACAGATACTGGTGAT+GGG - Chr8:33193475-33193494 None:intergenic 45.0%
GAGACTGAGTTTCATTGACG+CGG + Chr8:33191706-33191725 MsG0880043944.01.T01:intron 45.0%
GATGTTGAAGATCCGTTGCA+AGG + Chr8:33190336-33190355 MsG0880043944.01.T01:CDS 45.0%
GCCCAAGAACCAAATCTAAG+TGG - Chr8:33191409-33191428 None:intergenic 45.0%
GGATGAAGACGAGCTAGTAA+AGG - Chr8:33193601-33193620 None:intergenic 45.0%
GGGATGTCTTGAGTGGTAAA+AGG + Chr8:33193548-33193567 MsG0880043944.01.T01:CDS 45.0%
GTCAAAACGGCTGTAGATAG+TGG + Chr8:33191990-33192009 MsG0880043944.01.T01:intron 45.0%
GTCTTCCTGTTCAGGAACAT+CGG - Chr8:33194684-33194703 None:intergenic 45.0%
TCACCATCACCACTGAAACA+GGG - Chr8:33194162-33194181 None:intergenic 45.0%
TCAGACCTCGCTCAAATTAC+AGG - Chr8:33190603-33190622 None:intergenic 45.0%
TCGAGTTTCCCACATAAACC+AGG - Chr8:33193828-33193847 None:intergenic 45.0%
TCTGCTGTCATTCATCAGAC+AGG - Chr8:33195220-33195239 None:intergenic 45.0%
TCTGTCTCTGACAAACCAAG+TGG + Chr8:33193718-33193737 MsG0880043944.01.T01:CDS 45.0%
TCTTCCTGTTCAGGAACATC+GGG - Chr8:33194683-33194702 None:intergenic 45.0%
TGACAAGTCGTTATCCCTGT+GGG + Chr8:33193528-33193547 MsG0880043944.01.T01:CDS 45.0%
TGACATTGTGACAGTCGAGA+AGG + Chr8:33194592-33194611 MsG0880043944.01.T01:CDS 45.0%
TGACCAACAGATACTGGTGA+TGG - Chr8:33193476-33193495 None:intergenic 45.0%
TGCCAAGCAGAGAGATGATT+TGG - Chr8:33193632-33193651 None:intergenic 45.0%
TGTATAAGGAGGGAGAGTCT+AGG + Chr8:33192648-33192667 MsG0880043944.01.T01:intron 45.0%
TGTGAGGCCGTTATGAGTTT+AGG + Chr8:33194907-33194926 MsG0880043944.01.T01:intron 45.0%
TGTTCAGGAACATCGGGAAT+GGG - Chr8:33194677-33194696 None:intergenic 45.0%
TTACTAGCTCGTCTTCATCC+GGG + Chr8:33193601-33193620 MsG0880043944.01.T01:CDS 45.0%
TTCCTGACCAACTAGAGCAA+GGG - Chr8:33190823-33190842 None:intergenic 45.0%
TTCTTCCAAATAGAGCAGCC+TGG + Chr8:33191858-33191877 MsG0880043944.01.T01:intron 45.0%
TTTCCTGACCAACTAGAGCA+AGG - Chr8:33190824-33190843 None:intergenic 45.0%
! AAATGAGGAGTATGTGGAGC+GGG + Chr8:33194416-33194435 MsG0880043944.01.T01:CDS 45.0%
! CAAGCAGAGAGATGATTTGG+AGG - Chr8:33193629-33193648 None:intergenic 45.0%
! CAATGGCATTGCTATTGCAG+AGG + Chr8:33191732-33191751 MsG0880043944.01.T01:intron 45.0%
! CACACACAAGAAGTGCATGA+AGG - Chr8:33191556-33191575 None:intergenic 45.0%
! CGAGGAAAATGAGGAGTATG+TGG + Chr8:33194410-33194429 MsG0880043944.01.T01:CDS 45.0%
! GAAACCATCAGAGAAGGTGT+TGG + Chr8:33195082-33195101 MsG0880043944.01.T01:CDS 45.0%
! GGTGTGTTTTTCCTGTGATG+TGG + Chr8:33191380-33191399 MsG0880043944.01.T01:intron 45.0%
! GTCTAGGACTCCTTGATACT+CGG + Chr8:33192664-33192683 MsG0880043944.01.T01:intron 45.0%
! TACAGCCGCTATTTGCTACA+AGG - Chr8:33191146-33191165 None:intergenic 45.0%
! TCTAGGACTCCTTGATACTC+GGG + Chr8:33192665-33192684 MsG0880043944.01.T01:intron 45.0%
!! AGATTTGGTTCTTGGGCTAG+CGG + Chr8:33191412-33191431 MsG0880043944.01.T01:intron 45.0%
!! CTGGCTTTTTCCAATGACGA+TGG + Chr8:33191766-33191785 MsG0880043944.01.T01:intron 45.0%
!! GCTTTTTCCAATGACGATGG+GGG + Chr8:33191769-33191788 MsG0880043944.01.T01:intron 45.0%
!! GGCTTTTTCCAATGACGATG+GGG + Chr8:33191768-33191787 MsG0880043944.01.T01:intron 45.0%
!! TGCAGAGGCATCATAATCTC+TGG + Chr8:33191747-33191766 MsG0880043944.01.T01:intron 45.0%
!! TTTCAGTGGTGATGGTGAGT+GGG + Chr8:33194164-33194183 MsG0880043944.01.T01:CDS 45.0%
!!! GCCGTTTTGACTACAGAGAT+AGG - Chr8:33191981-33192000 None:intergenic 45.0%
!!! TCGCTCGCTTTTTTTTGTGC+TGG + Chr8:33190461-33190480 MsG0880043944.01.T01:intron 45.0%
!!! TGGGATTGGATGCTGTTTTG+TGG + Chr8:33191489-33191508 MsG0880043944.01.T01:intron 45.0%
!! AAATCAATAATATTTATATA+TGG - Chr8:33195348-33195367 None:intergenic 5.0%
!!! ATATATAAATATTATTGATT+TGG + Chr8:33195347-33195366 MsG0880043944.01.T01:three_prime_UTR 5.0%
AAACCCTGTCTCACGCAACA+AGG + Chr8:33193744-33193763 MsG0880043944.01.T01:CDS 50.0%
AACCCTGTCTCACGCAACAA+GGG + Chr8:33193745-33193764 MsG0880043944.01.T01:CDS 50.0%
AACCCTTGTTGCGTGAGACA+GGG - Chr8:33193750-33193769 None:intergenic 50.0%
AAGGCGGAAACCATCAGAGA+AGG + Chr8:33195076-33195095 MsG0880043944.01.T01:CDS 50.0%
ACATCGGGAATGGGAGATAC+TGG - Chr8:33194668-33194687 None:intergenic 50.0%
ACATGCAGCAGTAGGTGTGA+AGG - Chr8:33193788-33193807 None:intergenic 50.0%
ACCACTCAAGACATCCCACA+GGG - Chr8:33193545-33193564 None:intergenic 50.0%
AGTAAAGATGGTGAGGTGCG+TGG + Chr8:33193871-33193890 MsG0880043944.01.T01:CDS 50.0%
CAGCGACTCTGATATGTCTG+AGG + Chr8:33194625-33194644 MsG0880043944.01.T01:CDS 50.0%
CATGCCTCAAGTCCACTTGA+AGG + Chr8:33194797-33194816 MsG0880043944.01.T01:CDS 50.0%
CATTCCCGATGTTCCTGAAC+AGG + Chr8:33194676-33194695 MsG0880043944.01.T01:CDS 50.0%
CTAAGTGGACACCACATCAC+AGG - Chr8:33191394-33191413 None:intergenic 50.0%
CTCACCATCACCACTGAAAC+AGG - Chr8:33194163-33194182 None:intergenic 50.0%
CTCCCATCACCAGTATCTGT+TGG + Chr8:33193470-33193489 MsG0880043944.01.T01:CDS 50.0%
CTGACAAGTCGTTATCCCTG+TGG + Chr8:33193527-33193546 MsG0880043944.01.T01:CDS 50.0%
CTGTTCAGGAACATCGGGAA+TGG - Chr8:33194678-33194697 None:intergenic 50.0%
GAATCAGCTGGCTGCAATGA+TGG + Chr8:33193379-33193398 MsG0880043944.01.T01:intron 50.0%
GACTCCTTGATACTCGGGTA+TGG + Chr8:33192670-33192689 MsG0880043944.01.T01:intron 50.0%
GAGGACCTCGGTGATCTAAA+TGG + Chr8:33194048-33194067 MsG0880043944.01.T01:CDS 50.0%
GCAGCCAAATAGCATAGCAG+AGG + Chr8:33191184-33191203 MsG0880043944.01.T01:intron 50.0%
GGCGTGACATTACCTTCAAG+TGG - Chr8:33194812-33194831 None:intergenic 50.0%
GTTGAGAAGTTGAAGGCTGC+AGG + Chr8:33194072-33194091 MsG0880043944.01.T01:CDS 50.0%
TAATTGGACTCTGGGCAGAG+TGG - Chr8:33192585-33192604 None:intergenic 50.0%
TACCACTCAAGACATCCCAC+AGG - Chr8:33193546-33193565 None:intergenic 50.0%
TACCCTTGCTCTAGTTGGTC+AGG + Chr8:33190818-33190837 MsG0880043944.01.T01:intron 50.0%
TACTAGCTCGTCTTCATCCG+GGG + Chr8:33193602-33193621 MsG0880043944.01.T01:CDS 50.0%
TAGCCCCTGTAATTTGAGCG+AGG + Chr8:33190595-33190614 MsG0880043944.01.T01:intron 50.0%
TTGTTGCGTGAGACAGGGTT+TGG - Chr8:33193745-33193764 None:intergenic 50.0%
TTTCATTGACGCGGCTGCAA+TGG + Chr8:33191715-33191734 MsG0880043944.01.T01:intron 50.0%
! AATCACGAAGGTGCACTGGA+AGG + Chr8:33194134-33194153 MsG0880043944.01.T01:CDS 50.0%
! AGAGATGATTTGGAGGACCC+CGG - Chr8:33193622-33193641 None:intergenic 50.0%
! ATGCAATCACGAAGGTGCAC+TGG + Chr8:33194130-33194149 MsG0880043944.01.T01:CDS 50.0%
! CTTCAAGTGGACTTGAGGCA+TGG - Chr8:33194799-33194818 None:intergenic 50.0%
! TCACGCAACAAGGGTTCTGA+TGG + Chr8:33193754-33193773 MsG0880043944.01.T01:CDS 50.0%
! TGAGAACCGCCTACCCATTT+TGG + Chr8:33191359-33191378 MsG0880043944.01.T01:intron 50.0%
!! AGAGAAGGTGTTGGAGTTGC+AGG + Chr8:33195091-33195110 MsG0880043944.01.T01:CDS 50.0%
!! GTTGGTGGTTCTGCTAGCAA+AGG + Chr8:33194189-33194208 MsG0880043944.01.T01:CDS 50.0%
!! GTTTCAGTGGTGATGGTGAG+TGG + Chr8:33194163-33194182 MsG0880043944.01.T01:CDS 50.0%
ACACAGACCCCCATCGTCAT+TGG - Chr8:33191779-33191798 None:intergenic 55.0%
CAATCGCAGTGGCGTTGCAA+TGG + Chr8:33190963-33190982 MsG0880043944.01.T01:intron 55.0%
CGTGGCATGGTTCCTATCTC+TGG + Chr8:33193889-33193908 MsG0880043944.01.T01:CDS 55.0%
GAACCCTTGTTGCGTGAGAC+AGG - Chr8:33193751-33193770 None:intergenic 55.0%
GCACCCTGTTTCAGTGGTGA+TGG + Chr8:33194156-33194175 MsG0880043944.01.T01:CDS 55.0%
GCTGAACTGAACGAGGACCT+CGG + Chr8:33194036-33194055 MsG0880043944.01.T01:CDS 55.0%
GGCATGGTTCCTATCTCTGG+TGG + Chr8:33193892-33193911 MsG0880043944.01.T01:CDS 55.0%
TCCCTGTGGGATGTCTTGAG+TGG + Chr8:33193541-33193560 MsG0880043944.01.T01:CDS 55.0%
TGATGCGTGTGCAATCGCAG+TGG + Chr8:33190952-33190971 MsG0880043944.01.T01:intron 55.0%
TGCAGCAGTAGGTGTGAAGG+AGG - Chr8:33193785-33193804 None:intergenic 55.0%
! GACTCTGGGCAGAGTGGATT+AGG - Chr8:33192579-33192598 None:intergenic 55.0%
! GAGACAGGGTTTGGTCCACT+TGG - Chr8:33193736-33193755 None:intergenic 55.0%
!! GATGGTGAGTGGGTTGTTGG+TGG + Chr8:33194174-33194193 MsG0880043944.01.T01:CDS 55.0%
!! GGTGATGGTGAGTGGGTTGT+TGG + Chr8:33194171-33194190 MsG0880043944.01.T01:CDS 55.0%
!! TGGAAGGCACCCTGTTTCAG+TGG + Chr8:33194150-33194169 MsG0880043944.01.T01:CDS 55.0%
AGATGGTGAGGTGCGTGGCA+TGG + Chr8:33193876-33193895 MsG0880043944.01.T01:CDS 60.0%
CGTCGTGGTACCCTTCTTGC+TGG + Chr8:33190423-33190442 MsG0880043944.01.T01:CDS 60.0%
CTGCGGTCGAATGATGCAGC+CGG + Chr8:33190520-33190539 MsG0880043944.01.T01:intron 60.0%
GGGCTTCCTTAGGCCCTTCA+AGG - Chr8:33194263-33194282 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 33190327 33195500 33190327 ID=MsG0880043944.01;Name=MsG0880043944.01
Chr8 mRNA 33190327 33195500 33190327 ID=MsG0880043944.01.T01;Parent=MsG0880043944.01;Name=MsG0880043944.01.T01;_AED=0.33;_eAED=0.33;_QI=0|1|0.75|1|1|1|4|268|550
Chr8 exon 33190327 33190444 33190327 ID=MsG0880043944.01.T01:exon:9940;Parent=MsG0880043944.01.T01
Chr8 exon 33193386 33194473 33193386 ID=MsG0880043944.01.T01:exon:9941;Parent=MsG0880043944.01.T01
Chr8 exon 33194557 33194818 33194557 ID=MsG0880043944.01.T01:exon:9942;Parent=MsG0880043944.01.T01
Chr8 exon 33195048 33195500 33195048 ID=MsG0880043944.01.T01:exon:9943;Parent=MsG0880043944.01.T01
Chr8 CDS 33190327 33190444 33190327 ID=MsG0880043944.01.T01:cds;Parent=MsG0880043944.01.T01
Chr8 CDS 33193386 33194473 33193386 ID=MsG0880043944.01.T01:cds;Parent=MsG0880043944.01.T01
Chr8 CDS 33194557 33194818 33194557 ID=MsG0880043944.01.T01:cds;Parent=MsG0880043944.01.T01
Chr8 CDS 33195048 33195232 33195048 ID=MsG0880043944.01.T01:cds;Parent=MsG0880043944.01.T01
Chr8 three_prime_UTR 33195233 33195500 33195233 ID=MsG0880043944.01.T01:three_prime_utr;Parent=MsG0880043944.01.T01
Gene Sequence

>MsG0880043944.01.T01

ATGGTTTTGGATGTTGAAGATCCGTTGCAAGGTGATTTTCCAGAAGTGATTGAAGAATATTTGGAACATGGGATTATGAAATGTATTGCTTTCAATCGTCGTGGTACCCTTCTTGCTGCTGGCTGCAATGATGGAAGCTGTGTTATTTGGGATTTTGAAGTCAGGGGCGTTGCTAAAGAGCTTCGAGATAATGAATGCTGTTCTCCCATCACCAGTATCTGTTGGTCAAAGTGTGGTAATCGAATTCTTGCATCTGCTGCTGACAAGTCGTTATCCCTGTGGGATGTCTTGAGTGGTAAAAGGATAAAAAGAATAGTTTTGCAGCAAACCCCTTTACTAGCTCGTCTTCATCCGGGGTCCTCCAAATCATCTCTCTGCTTGGCATGTCCTCTCTCATGTGCTCCAATGATTGTTGACTTAAACACTGAAAATACAACTTATCTTCAAGTTTCTGTCTCTGACAAACCAAGTGGACCAAACCCTGTCTCACGCAACAAGGGTTCTGATGGAAGTACCTCCTTCACACCTACTGCTGCATGTTTTAGTAAGTATGGAAACCTGGTTTATGTGGGAAACTCGAAAGGTGAAATTCTTGTAATTGACAGTAAAGATGGTGAGGTGCGTGGCATGGTTCCTATCTCTGGTGGTTCAGTAGTGAAGAACATTGTATTCAGCAGGAATGGACAGTATCTTCTAACAAACTCAAATGATCGAGTAATCAGAATCTATGAAAATCTTCTTCCACCAAAAGATGAAGTTAGAGCATTAGCTGAACTGAACGAGGACCTCGGTGATCTAAATGGTGTTGAGAAGTTGAAGGCTGCAGGATCAAAGTGTTTAACTTTGTTCCGTGAGTTTCAAGATGCAATCACGAAGGTGCACTGGAAGGCACCCTGTTTCAGTGGTGATGGTGAGTGGGTTGTTGGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACATATGGGATAGAGCTGGACATCTTGTGAAAATCCTTGAAGGGCCTAAGGAAGCCCTTATTGATTTAGCGTGGCATCCTGTACGTCCAATTGTTGTGTCTGTTTCTCTGTGTGGCATAGTTTATATATGGGCCAAAGAGTACATTGAGAACTGGAGTGCTTTTGCTCCTGATTTCAAAGAGATCGAGGAAAATGAGGAGTATGTGGAGCGGGAAGATGAATTTGATTTGAATCCTGACACTGATAATGTAAAAGGATCTGATGTCAATGAAGATGAGGACGTTGACATTGTGACAGTCGAGAAGGATCCTAATTTCAGCGACTCTGATATGTCTGAGGAAGAGCTACGTTATCTACCAGTATCTCCCATTCCCGATGTTCCTGAACAGGAAGACAGGCTTTTAGATAGTTCTTCGAAGATTGGGGACAGCAATAACTCTGGATCACCATTTTCTGAAGAAGTGGTAGCAAATGGACACATGATGAGCCATGCCTCAAGTCCACTTGAAGATGATGCTGTGGGAACAAGAATTAAAAGAAGGCGGAAACCATCAGAGAAGGTGTTGGAGTTGCAGGCTGAAAGAGTCAATAAAACCTCAAACTCTAGCAAACCATCAAGAACCAAAACTAAATCTTTTGTTGATGAGAGCAATGGTAATGATTTTTATTATGATGATGACCTGTCTGATGAATGA
Protein sequence

>MsG0880043944.01.T01

MVLDVEDPLQGDFPEVIEEYLEHGIMKCIAFNRRGTLLAAGCNDGSCVIWDFEVRGVAKELRDNECCSPITSICWSKCGNRILASAADKSLSLWDVLSGKRIKRIVLQQTPLLARLHPGSSKSSLCLACPLSCAPMIVDLNTENTTYLQVSVSDKPSGPNPVSRNKGSDGSTSFTPTAACFSKYGNLVYVGNSKGEILVIDSKDGEVRGMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEVRALAELNEDLGDLNGVEKLKAAGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLCGIVYIWAKEYIENWSAFAPDFKEIEENEEYVEREDEFDLNPDTDNVKGSDVNEDEDVDIVTVEKDPNFSDSDMSEEELRYLPVSPIPDVPEQEDRLLDSSSKIGDSNNSGSPFSEEVVANGHMMSHASSPLEDDAVGTRIKRRRKPSEKVLELQAERVNKTSNSSKPSRTKTKSFVDESNGNDFYYDDDLSDE*