AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022855.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022855.01.T02 AT2G36740 59.710 345 130 3 14 351 9 351 1.83e-129 375
MsG0480022855.01.T02 AT2G36740 62.126 301 105 3 10 303 5 303 2.08e-116 341
MsG0480022855.01.T01 AT2G36740 59.710 345 130 3 14 351 9 351 1.83e-129 375
MsG0480022855.01.T01 AT2G36740 62.126 301 105 3 10 303 5 303 2.08e-116 341

Find 28 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTATATGATTCAGTTTC+TGG 0.127458 4:-77574625 MsG0480022855.01.T01:CDS
TATGATTCAGTTTCTGGATA+TGG 0.207235 4:-77574619 MsG0480022855.01.T01:CDS
CAATGGCTTCTTTCATGATT+TGG 0.245034 4:+77574391 None:intergenic
CTCTAGAAAAGAAACGAATA+TGG 0.304931 4:-77574650 MsG0480022855.01.T01:CDS
TTAACTTCAAATCTTTCTTA+AGG 0.305053 4:-77574216 MsG0480022855.01.T02:three_prime_UTR
TAACTTCAAATCTTTCTTAA+GGG 0.318251 4:-77574215 MsG0480022855.01.T02:three_prime_UTR
GAGGCCTGTTTCAGTAATCT+TGG 0.349648 4:-77574311 MsG0480022855.01.T01:three_prime_UTR
GTTGGGATTAAAATAGAAAC+AGG 0.376767 4:-77574340 MsG0480022855.01.T01:three_prime_UTR
AGGCCTGTTTCAGTAATCTT+GGG 0.383670 4:-77574310 MsG0480022855.01.T01:three_prime_UTR
CACGATTCAAACCTCAGGTT+GGG 0.438979 4:-77574357 MsG0480022855.01.T01:three_prime_UTR
AGACCCAAGATTACTGAAAC+AGG 0.443789 4:+77574307 None:intergenic
AAATAGAAACAGGGTATTTG+AGG 0.471877 4:-77574330 MsG0480022855.01.T01:three_prime_UTR
CACATGATCGGTCCTTGGCT+CGG 0.478772 4:-77574546 MsG0480022855.01.T01:CDS
CAGTAATCTTGGGTCTTCTG+TGG 0.507755 4:-77574300 MsG0480022855.01.T01:three_prime_UTR
TTCATCACGATTCAAACCTC+AGG 0.516830 4:-77574362 MsG0480022855.01.T01:three_prime_UTR
ACATCCACATGATCGGTCCT+TGG 0.525200 4:-77574551 MsG0480022855.01.T01:CDS
GAATCTTCATCCTCAAAAGT+AGG 0.528439 4:+77574511 None:intergenic
TCTAGAAAAGAAACGAATAT+GGG 0.542033 4:-77574649 MsG0480022855.01.T01:CDS
TCACGATTCAAACCTCAGGT+TGG 0.550303 4:-77574358 MsG0480022855.01.T01:three_prime_UTR
AAAATATACATCCACATGAT+CGG 0.556585 4:-77574558 MsG0480022855.01.T01:CDS
TAATGCATCGTTATTACAAG+AGG 0.577004 4:+77574428 None:intergenic
CGAGCCAAGGACCGATCATG+TGG 0.604117 4:+77574547 None:intergenic
ATCGTGATGAAGCACAGCAA+TGG 0.617402 4:+77574374 None:intergenic
AAGATTCTGACTAACTGCCT+TGG 0.625749 4:-77574495 MsG0480022855.01.T01:intron
AGAAAAGAAACGAATATGGG+AGG 0.647868 4:-77574646 MsG0480022855.01.T01:CDS
AATTCTACGAAACCGAGCCA+AGG 0.655235 4:+77574534 None:intergenic
AATGCATCGTTATTACAAGA+GGG 0.657409 4:+77574429 None:intergenic
TTGGGATTAAAATAGAAACA+GGG 0.733790 4:-77574339 MsG0480022855.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTTTTTTTTCTTTTTTT+TGG - Chr4:77575847-77575866 MsG0480022855.01.T01:intron 10.0%
!!! TATGATTTTAATTAAGAAAA+TGG + Chr4:77574412-77574431 None:intergenic 10.0%
!!! TTCTTTTTATTATTTTAATG+AGG + Chr4:77574337-77574356 None:intergenic 10.0%
!! TACTGTTATAAAAGAATATT+AGG + Chr4:77577950-77577969 None:intergenic 15.0%
!! TATAAAAGAAGACTAAAAAT+AGG + Chr4:77578946-77578965 None:intergenic 15.0%
!! TTATAAGAACAATTATAACT+AGG + Chr4:77578464-77578483 None:intergenic 15.0%
!! TTCAATACAAAAAAAATTGA+CGG - Chr4:77577275-77577294 MsG0480022855.01.T01:CDS 15.0%
!!! AAGAATATCTCTTTTAATAA+AGG - Chr4:77574512-77574531 MsG0480022855.01.T01:CDS 15.0%
!!! ATCATAAAAAGTTATCTTTT+TGG + Chr4:77578018-77578037 None:intergenic 15.0%
!!! CTAACTAATTTTTGTAAATT+CGG + Chr4:77576680-77576699 None:intergenic 15.0%
!!! GTTTAATTAGTTTAAAGTTA+GGG - Chr4:77577297-77577316 MsG0480022855.01.T01:CDS 15.0%
!!! TTTAATCTATTGTTGTTATA+AGG + Chr4:77575491-77575510 None:intergenic 15.0%
!! AAAAAAAAAAATAGTTCAGC+CGG - Chr4:77577740-77577759 MsG0480022855.01.T01:intron 20.0%
!! AAATATAGTGCTAGAATAAA+AGG + Chr4:77576340-77576359 None:intergenic 20.0%
!! AACTTAAATGCTTATCATAT+AGG + Chr4:77575768-77575787 None:intergenic 20.0%
!! AAGAATTTCTCTATTAAGTA+TGG + Chr4:77574259-77574278 None:intergenic 20.0%
!! AATATAGTGCTAGAATAAAA+GGG + Chr4:77576339-77576358 None:intergenic 20.0%
!! CGAATTTACAAAAATTAGTT+AGG - Chr4:77576678-77576697 MsG0480022855.01.T01:intron 20.0%
!! CTTATTTCAATAATCTTTCT+GGG + Chr4:77575563-77575582 None:intergenic 20.0%
!! GAAGAAAATCTTATCTAATT+TGG - Chr4:77575052-77575071 MsG0480022855.01.T01:intron 20.0%
!! TAACTTCAAATCTTTCTTAA+GGG - Chr4:77579185-77579204 MsG0480022855.01.T01:five_prime_UTR 20.0%
!! TAATTCAATAACATCATAGT+GGG + Chr4:77578131-77578150 None:intergenic 20.0%
!! TACAAAAATTAGTTAGGTTT+AGG - Chr4:77576684-77576703 MsG0480022855.01.T01:intron 20.0%
!! TTAACTTCAAATCTTTCTTA+AGG - Chr4:77579184-77579203 MsG0480022855.01.T01:five_prime_UTR 20.0%
!! TTATTTCAATAATCTTTCTG+GGG + Chr4:77575562-77575581 None:intergenic 20.0%
!!! AAAATTGATGATAATGATGA+CGG - Chr4:77575086-77575105 MsG0480022855.01.T01:intron 20.0%
!!! AAATATAAAAGCATTCATGT+GGG - Chr4:77578582-77578601 MsG0480022855.01.T01:CDS 20.0%
!!! AACATGTGTCATTTTTTAAT+TGG - Chr4:77574451-77574470 MsG0480022855.01.T01:intron 20.0%
!!! ACTAAGTGTTTTAGATAATT+AGG - Chr4:77576968-77576987 MsG0480022855.01.T01:intron 20.0%
!!! ATTAGTTTATAGACAATAAC+TGG - Chr4:77576495-77576514 MsG0480022855.01.T01:intron 20.0%
!!! ATTTTTGTAAATTCGGTATT+TGG + Chr4:77576673-77576692 None:intergenic 20.0%
!!! CTAAGTGTTTTAGATAATTA+GGG - Chr4:77576969-77576988 MsG0480022855.01.T01:intron 20.0%
!!! CTTGTAATTGATTTTAATTG+GGG - Chr4:77578694-77578713 MsG0480022855.01.T01:CDS 20.0%
!!! CTTTTAAAATAATTCGACAA+CGG - Chr4:77577872-77577891 MsG0480022855.01.T01:intron 20.0%
!!! GCTTGTAATTGATTTTAATT+GGG - Chr4:77578693-77578712 MsG0480022855.01.T01:CDS 20.0%
!!! GGTTTAATTAGTTTAAAGTT+AGG - Chr4:77577296-77577315 MsG0480022855.01.T01:CDS 20.0%
!!! GTAAAACTTTTTCTACTTAA+AGG + Chr4:77577088-77577107 None:intergenic 20.0%
!!! TAAATATAAAAGCATTCATG+TGG - Chr4:77578581-77578600 MsG0480022855.01.T01:CDS 20.0%
!!! TCATCATTATCATCAATTTT+GGG + Chr4:77575086-77575105 None:intergenic 20.0%
!!! TGCTTGTAATTGATTTTAAT+TGG - Chr4:77578692-77578711 MsG0480022855.01.T01:CDS 20.0%
!!! TTTATTCTAGCACTATATTT+TGG - Chr4:77576340-77576359 MsG0480022855.01.T01:intron 20.0%
!!! TTTTTATCAAAAAATGAGCA+GGG + Chr4:77579147-77579166 None:intergenic 20.0%
! AAAAGAAGACTAAAAATAGG+AGG + Chr4:77578943-77578962 None:intergenic 25.0%
! AAAATATACATCCACATGAT+CGG - Chr4:77578842-77578861 MsG0480022855.01.T01:five_prime_UTR 25.0%
! AAATTAGTTAGGTTTAGGAA+AGG - Chr4:77576689-77576708 MsG0480022855.01.T01:intron 25.0%
! AAGCATAATTGAAACATCAA+AGG + Chr4:77576025-77576044 None:intergenic 25.0%
! AATAAGCTTATAACAGCTTA+TGG - Chr4:77575577-77575596 MsG0480022855.01.T01:intron 25.0%
! AATGAATAAAAAGAAGCGAT+TGG - Chr4:77574989-77575008 MsG0480022855.01.T01:intron 25.0%
! AATGACGAAACAATTTCTTT+GGG + Chr4:77576439-77576458 None:intergenic 25.0%
! AATTATGAACTTGAGGAATT+TGG - Chr4:77576058-77576077 MsG0480022855.01.T01:intron 25.0%
! AATTCAATAACATCATAGTG+GGG + Chr4:77578130-77578149 None:intergenic 25.0%
! ACAGATTGCTATATGTAAAA+TGG + Chr4:77576229-77576248 None:intergenic 25.0%
! AGGATTAAACACAATTTCAT+GGG + Chr4:77578444-77578463 None:intergenic 25.0%
! ATACACTACATATCACAAAA+TGG - Chr4:77576155-77576174 MsG0480022855.01.T01:intron 25.0%
! ATGTAATATATTCCGTTTCT+TGG - Chr4:77576382-77576401 MsG0480022855.01.T01:intron 25.0%
! ATGTATAGTAAACAATGAGT+AGG - Chr4:77576731-77576750 MsG0480022855.01.T01:intron 25.0%
! CTTAACAGAATCTATGTAAA+TGG - Chr4:77575669-77575688 MsG0480022855.01.T01:intron 25.0%
! GAATTCGTTAGAGAAAAAAT+TGG - Chr4:77577246-77577265 MsG0480022855.01.T01:CDS 25.0%
! GAGTGTAAGAATAATATGTT+GGG - Chr4:77574476-77574495 MsG0480022855.01.T01:intron 25.0%
! GCTTATTTCAATAATCTTTC+TGG + Chr4:77575564-77575583 None:intergenic 25.0%
! GTAATTCAATAACATCATAG+TGG + Chr4:77578132-77578151 None:intergenic 25.0%
! TAAGATTTGCAACTATGTAT+GGG - Chr4:77577118-77577137 MsG0480022855.01.T01:CDS 25.0%
! TAATAAAGGAATATGAGAGT+GGG - Chr4:77574526-77574545 MsG0480022855.01.T01:CDS 25.0%
! TACATAGATTCTGTTAAGAT+TGG + Chr4:77575667-77575686 None:intergenic 25.0%
! TAGGATTAAACACAATTTCA+TGG + Chr4:77578445-77578464 None:intergenic 25.0%
! TCTAGAAAAGAAACGAATAT+GGG - Chr4:77578751-77578770 MsG0480022855.01.T01:CDS 25.0%
! TGAATCACAGAAAAAGATAT+TGG + Chr4:77575261-77575280 None:intergenic 25.0%
! TGAGTGTAAGAATAATATGT+TGG - Chr4:77574475-77574494 MsG0480022855.01.T01:intron 25.0%
! TTAATAAAGGAATATGAGAG+TGG - Chr4:77574525-77574544 MsG0480022855.01.T01:CDS 25.0%
! TTGGGATTAAAATAGAAACA+GGG - Chr4:77579061-77579080 MsG0480022855.01.T01:intron 25.0%
! TTGTACCTCAAATATTGTTA+AGG - Chr4:77577787-77577806 MsG0480022855.01.T01:intron 25.0%
!! AGTATGGTTAATAGTCATTT+TGG + Chr4:77574243-77574262 None:intergenic 25.0%
!! ATCTTTTTCTGTGATTCATT+AGG - Chr4:77575263-77575282 MsG0480022855.01.T01:intron 25.0%
!! CTTTTTATCAAAAAATGAGC+AGG + Chr4:77579148-77579167 None:intergenic 25.0%
!! GTCATCATTATCATCAATTT+TGG + Chr4:77575087-77575106 None:intergenic 25.0%
!! TAACAATATTTGAGGTACAA+TGG + Chr4:77577787-77577806 None:intergenic 25.0%
!! TAATTAGTGTGAATGAGTTT+TGG + Chr4:77574868-77574887 None:intergenic 25.0%
!! TAATTCTTCTTGATTTTCTC+AGG - Chr4:77574923-77574942 MsG0480022855.01.T01:intron 25.0%
!! TATCTAAAACACTTAGTTGT+GGG + Chr4:77576965-77576984 None:intergenic 25.0%
!! TCTTTTTCTGTGATTCATTA+GGG - Chr4:77575264-77575283 MsG0480022855.01.T01:intron 25.0%
!! TGATGTTTCAATTATGCTTT+TGG - Chr4:77576026-77576045 MsG0480022855.01.T01:intron 25.0%
!! TTATCTAAAACACTTAGTTG+TGG + Chr4:77576966-77576985 None:intergenic 25.0%
!!! AGCAATCTGTTTATTTTTTC+AGG - Chr4:77576239-77576258 MsG0480022855.01.T01:intron 25.0%
!!! ATGAGGTGTTAGATTTTAAT+TGG + Chr4:77574320-77574339 None:intergenic 25.0%
!!! GTGTTAGATTTTAATTGGTT+GGG + Chr4:77574315-77574334 None:intergenic 25.0%
AAGTTTACTTGCAATCAAGA+AGG + Chr4:77577903-77577922 None:intergenic 30.0%
AATGCATCGTTATTACAAGA+GGG + Chr4:77578974-77578993 None:intergenic 30.0%
ACATAGTTGCAAATCTTACT+AGG + Chr4:77577116-77577135 None:intergenic 30.0%
ACTACATATCACAAAATGGT+TGG - Chr4:77576159-77576178 MsG0480022855.01.T01:intron 30.0%
ATAGTAAACAATGAGTAGGA+AGG - Chr4:77576735-77576754 MsG0480022855.01.T01:intron 30.0%
ATTGTTGGATAGCTAATGAT+GGG - Chr4:77578327-77578346 MsG0480022855.01.T01:CDS 30.0%
CAAAGAAATTGTTTCGTCAT+TGG - Chr4:77576438-77576457 MsG0480022855.01.T01:intron 30.0%
CAAGTAAACTTTCTCTGAAT+GGG - Chr4:77577912-77577931 MsG0480022855.01.T01:intron 30.0%
CAATGACGAAACAATTTCTT+TGG + Chr4:77576440-77576459 None:intergenic 30.0%
CTATCTTGAAAAACAGCTTA+TGG + Chr4:77575432-77575451 None:intergenic 30.0%
GAAAACTAAAACAAACAAGC+AGG + Chr4:77575995-77576014 None:intergenic 30.0%
GAACTCCTTAACAATATTTG+AGG + Chr4:77577795-77577814 None:intergenic 30.0%
GAACTTTATGAACCAAGAAA+CGG + Chr4:77576397-77576416 None:intergenic 30.0%
GAGTTAGTACATTAGTACAA+TGG - Chr4:77574609-77574628 MsG0480022855.01.T01:CDS 30.0%
GGTCAATATTAGAATACACT+TGG - Chr4:77575947-77575966 MsG0480022855.01.T01:intron 30.0%
GTAAGATTTGCAACTATGTA+TGG - Chr4:77577117-77577136 MsG0480022855.01.T01:CDS 30.0%
GTGCATAAAACTGTCTTTAA+TGG - Chr4:77576125-77576144 MsG0480022855.01.T01:intron 30.0%
GTTAATGTGATTCACTTCAT+AGG - Chr4:77577971-77577990 MsG0480022855.01.T01:intron 30.0%
GTTGGGATTAAAATAGAAAC+AGG - Chr4:77579060-77579079 MsG0480022855.01.T01:intron 30.0%
TAATGCATCGTTATTACAAG+AGG + Chr4:77578975-77578994 None:intergenic 30.0%
TAGACAATAACTGGAATAAC+TGG - Chr4:77576504-77576523 MsG0480022855.01.T01:intron 30.0%
TATTGTTGGATAGCTAATGA+TGG - Chr4:77578326-77578345 MsG0480022855.01.T01:CDS 30.0%
TCAACAAGATGAATTGTTCT+GGG - Chr4:77574738-77574757 MsG0480022855.01.T01:intron 30.0%
TCACATCAATACATCAAGAA+AGG + Chr4:77577681-77577700 None:intergenic 30.0%
TCTGAAAAGCTAGAGAAATT+GGG + Chr4:77578385-77578404 None:intergenic 30.0%
TGACATTATAACAAGTGCTA+AGG - Chr4:77576597-77576616 MsG0480022855.01.T01:intron 30.0%
TGGTTAATGATAGTAGGATT+AGG - Chr4:77578608-77578627 MsG0480022855.01.T01:CDS 30.0%
TTAGTACATTAGTACAATGG+AGG - Chr4:77574612-77574631 MsG0480022855.01.T01:CDS 30.0%
TTATAATCCAACTGAACTAC+TGG + Chr4:77577721-77577740 None:intergenic 30.0%
TTCAACAAGATGAATTGTTC+TGG - Chr4:77574737-77574756 MsG0480022855.01.T01:intron 30.0%
! AAATAGAAACAGGGTATTTG+AGG - Chr4:77579070-77579089 MsG0480022855.01.T01:intron 30.0%
! AACATTTTCAGACCATAATC+AGG + Chr4:77575833-77575852 None:intergenic 30.0%
! ATTCTTTCATCATCGTTTTG+TGG + Chr4:77574972-77574991 None:intergenic 30.0%
! CGTATTTGGAGTTTACTAAA+GGG - Chr4:77576267-77576286 MsG0480022855.01.T01:intron 30.0%
! CTCTAGAAAAGAAACGAATA+TGG - Chr4:77578750-77578769 MsG0480022855.01.T01:CDS 30.0%
! GCAGTTGAACATAAATGTTT+TGG - Chr4:77576621-77576640 MsG0480022855.01.T01:intron 30.0%
! GTATTTGGAGTTTACTAAAG+GGG - Chr4:77576268-77576287 MsG0480022855.01.T01:intron 30.0%
! TACATAGAATTTTCTGATGC+CGG + Chr4:77577492-77577511 None:intergenic 30.0%
! TATGATTCAGTTTCTGGATA+TGG - Chr4:77578781-77578800 MsG0480022855.01.T01:intron 30.0%
! TCATTATCATCAATTTTGGG+AGG + Chr4:77575083-77575102 None:intergenic 30.0%
! TCGTATTTGGAGTTTACTAA+AGG - Chr4:77576266-77576285 MsG0480022855.01.T01:intron 30.0%
! TGAGAAGAATTTAAAGTACC+CGG - Chr4:77577470-77577489 MsG0480022855.01.T01:intron 30.0%
! TTCAGATGGTATCATTTTAC+TGG - Chr4:77576564-77576583 MsG0480022855.01.T01:intron 30.0%
!! ATGTTGGTAACTCTTACAAA+TGG - Chr4:77577403-77577422 MsG0480022855.01.T01:intron 30.0%
!! TGCATTTAGTTTGGTTGTAT+TGG - Chr4:77576197-77576216 MsG0480022855.01.T01:intron 30.0%
!! TGTTGGTAACTCTTACAAAT+GGG - Chr4:77577404-77577423 MsG0480022855.01.T01:intron 30.0%
!!! ATAAATGTTTTGGAGACCAA+GGG - Chr4:77576631-77576650 MsG0480022855.01.T01:intron 30.0%
!!! GGTGTTAGATTTTAATTGGT+TGG + Chr4:77574316-77574335 None:intergenic 30.0%
!!! TTTTTCAGGTTGTTCGTATT+TGG - Chr4:77576253-77576272 MsG0480022855.01.T01:intron 30.0%
!!! TTTTTTTTTTCCTTCTGCAG+TGG - Chr4:77578061-77578080 MsG0480022855.01.T01:intron 30.0%
AAACAACAAGAACAACAACC+AGG - Chr4:77575121-77575140 MsG0480022855.01.T01:intron 35.0%
AAACCAGTAATAACGCAAAC+AGG + Chr4:77577642-77577661 None:intergenic 35.0%
AAGTGTTAACACTGAACAGA+AGG - Chr4:77574571-77574590 MsG0480022855.01.T01:CDS 35.0%
AAGTTAGGGTAGCTACTATA+TGG - Chr4:77577311-77577330 MsG0480022855.01.T01:CDS 35.0%
AATAACTGGACACATTCCAA+AGG - Chr4:77576518-77576537 MsG0480022855.01.T01:intron 35.0%
ACAACCAAACTAAATGCACA+TGG + Chr4:77576195-77576214 None:intergenic 35.0%
ACAATGGAGGAAAAGAATTC+AGG - Chr4:77574625-77574644 MsG0480022855.01.T01:CDS 35.0%
AGAAAAGAAACGAATATGGG+AGG - Chr4:77578754-77578773 MsG0480022855.01.T01:CDS 35.0%
AGATAGCTTATGCTTCTGTT+TGG - Chr4:77575446-77575465 MsG0480022855.01.T01:intron 35.0%
ATAATATGCGAGGTTGAAGA+TGG - Chr4:77577379-77577398 MsG0480022855.01.T01:intron 35.0%
ATAGACAAAGGGAAATCTTC+CGG + Chr4:77577762-77577781 None:intergenic 35.0%
ATGTATGGGTCAGAAATGTT+GGG - Chr4:77577132-77577151 MsG0480022855.01.T01:CDS 35.0%
CAACAAGATGAATTGTTCTG+GGG - Chr4:77574739-77574758 MsG0480022855.01.T01:intron 35.0%
CAATGGCTTCTTTCATGATT+TGG + Chr4:77579012-77579031 None:intergenic 35.0%
CATTCCATGTGCATTTAGTT+TGG - Chr4:77576188-77576207 MsG0480022855.01.T01:intron 35.0%
CTGCAGAAATTATGAACTTG+AGG - Chr4:77576051-77576070 MsG0480022855.01.T01:intron 35.0%
CTTAAGATGACATGGTTCAT+TGG + Chr4:77578208-77578227 None:intergenic 35.0%
CTTATAACAGCTTATGGACA+TGG - Chr4:77575583-77575602 MsG0480022855.01.T01:intron 35.0%
CTTTCCTTCTTAAGATGACA+TGG + Chr4:77578216-77578235 None:intergenic 35.0%
GAATCTTCATCCTCAAAAGT+AGG + Chr4:77578892-77578911 None:intergenic 35.0%
GATATTGGAGATAACCTTGT+AGG + Chr4:77575246-77575265 None:intergenic 35.0%
GCAAGTAAACTTTCTCTGAA+TGG - Chr4:77577911-77577930 MsG0480022855.01.T01:intron 35.0%
GCAATCATGAGCATAAATGA+TGG - Chr4:77577164-77577183 MsG0480022855.01.T01:intron 35.0%
GGAGGAAAAAAAAATCACCA+AGG + Chr4:77578925-77578944 None:intergenic 35.0%
GGCTTATATGATTCAGTTTC+TGG - Chr4:77578775-77578794 MsG0480022855.01.T01:CDS 35.0%
GGGTCTATCTTACAAAAGAA+AGG - Chr4:77576989-77577008 MsG0480022855.01.T01:intron 35.0%
GGGTGTAAAAATGATGTGTT+GGG + Chr4:77574295-77574314 None:intergenic 35.0%
GGTTTGATCTAATGTTCCAT+AGG - Chr4:77578082-77578101 MsG0480022855.01.T01:intron 35.0%
GTAACTCTTACAAATGGGTA+GGG - Chr4:77577409-77577428 MsG0480022855.01.T01:intron 35.0%
GTACAATGGCTATAGACAAA+GGG + Chr4:77577773-77577792 None:intergenic 35.0%
GTTCTTCTAAACAATATCCC+AGG - Chr4:77575611-77575630 MsG0480022855.01.T01:intron 35.0%
TAAACACAATTTCATGGGTG+TGG + Chr4:77578439-77578458 None:intergenic 35.0%
TAACTCTTACAAATGGGTAG+GGG - Chr4:77577410-77577429 MsG0480022855.01.T01:intron 35.0%
TATGTATGGGTCAGAAATGT+TGG - Chr4:77577131-77577150 MsG0480022855.01.T01:CDS 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + Chr4:77576860-77576879 None:intergenic 35.0%
TGAACCATGTCATCTTAAGA+AGG - Chr4:77578209-77578228 MsG0480022855.01.T01:CDS 35.0%
TGAGCATAAATGATGGTTGT+AGG - Chr4:77577171-77577190 MsG0480022855.01.T01:intron 35.0%
TGGGTGTAAAAATGATGTGT+TGG + Chr4:77574296-77574315 None:intergenic 35.0%
TGTATTTGTGCTCATCTAGT+GGG - Chr4:77575352-77575371 MsG0480022855.01.T01:intron 35.0%
TGTGATATGTAGTGTATCTG+TGG + Chr4:77576152-77576171 None:intergenic 35.0%
TTAGTTAGGTTTAGGAAAGG+AGG - Chr4:77576692-77576711 MsG0480022855.01.T01:intron 35.0%
TTCAACCTCGCATATTATGA+AGG + Chr4:77577377-77577396 None:intergenic 35.0%
TTCCAAACAACACCTGATTA+TGG - Chr4:77575818-77575837 MsG0480022855.01.T01:intron 35.0%
TTGAAGTAGAGAAATGCTTC+AGG - Chr4:77577050-77577069 MsG0480022855.01.T01:intron 35.0%
TTGATCTAATGTTCCATAGG+AGG - Chr4:77578085-77578104 MsG0480022855.01.T01:intron 35.0%
TTGATTACCAGTAGTTCAGT+TGG - Chr4:77577711-77577730 MsG0480022855.01.T01:intron 35.0%
! AAAGCTTCTTTTGTAGCGTA+TGG + Chr4:77577856-77577875 None:intergenic 35.0%
! ACATAGAATTTTCTGATGCC+GGG + Chr4:77577491-77577510 None:intergenic 35.0%
! AGCATTTAAGTTAGAAGCAC+TGG - Chr4:77575776-77575795 MsG0480022855.01.T01:intron 35.0%
! CATTGTCGATCTCTTTTTCT+TGG + Chr4:77578815-77578834 None:intergenic 35.0%
! CTCTGAAAAGCTAGAGAAAT+TGG + Chr4:77578386-77578405 None:intergenic 35.0%
!! GGTTAATAGTCATTTTGGTG+TGG + Chr4:77574238-77574257 None:intergenic 35.0%
!! TCGTAGAATTCCTACTTTTG+AGG - Chr4:77578879-77578898 MsG0480022855.01.T01:intron 35.0%
!! TTTCTTAGTCTTGAAGTCCA+GGG - Chr4:77578296-77578315 MsG0480022855.01.T01:CDS 35.0%
!!! CATAAATGTTTTGGAGACCA+AGG - Chr4:77576630-77576649 MsG0480022855.01.T01:intron 35.0%
!!! TCTATTTTAATCCCAACCTG+AGG + Chr4:77579057-77579076 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - Chr4:77576859-77576878 MsG0480022855.01.T01:intron 35.0%
!!! TTTTCTTAGTCTTGAAGTCC+AGG - Chr4:77578295-77578314 MsG0480022855.01.T01:CDS 35.0%
AACTCTTACAAATGGGTAGG+GGG - Chr4:77577411-77577430 MsG0480022855.01.T01:intron 40.0%
AAGAAGCGATTGGTATATCC+TGG - Chr4:77574999-77575018 MsG0480022855.01.T01:intron 40.0%
AAGATTCTGACTAACTGCCT+TGG - Chr4:77578905-77578924 MsG0480022855.01.T01:intron 40.0%
AAGCTAGAGAAATTGGGTGA+AGG + Chr4:77578379-77578398 None:intergenic 40.0%
AAGGAGTTCTCTCTTGATAC+AGG - Chr4:77577806-77577825 MsG0480022855.01.T01:intron 40.0%
ACAACTCAAGAGAAATCCCT+TGG + Chr4:77576650-77576669 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + Chr4:77576866-77576885 None:intergenic 40.0%
ACATGCCTTCATAATATGCG+AGG - Chr4:77577369-77577388 MsG0480022855.01.T01:intron 40.0%
AGAAGCGATTGGTATATCCT+GGG - Chr4:77575000-77575019 MsG0480022855.01.T01:intron 40.0%
AGACCCAAGATTACTGAAAC+AGG + Chr4:77579096-77579115 None:intergenic 40.0%
AGGCCTGTTTCAGTAATCTT+GGG - Chr4:77579090-77579109 MsG0480022855.01.T01:intron 40.0%
AGTAATAAGGAAGAAAGGCG+AGG - Chr4:77575877-77575896 MsG0480022855.01.T01:intron 40.0%
AGTTACGTCTTGGTCGAAAT+CGG + Chr4:77574839-77574858 None:intergenic 40.0%
ATAACGCAAACAGGTTGTTC+TGG + Chr4:77577633-77577652 None:intergenic 40.0%
ATCTACTAGCATAAGCACCT+GGG + Chr4:77575631-77575650 None:intergenic 40.0%
ATGATGGTTGTAGGAATGAG+TGG - Chr4:77577180-77577199 MsG0480022855.01.T01:intron 40.0%
ATGCGAAGGAGGTAATGATT+AGG - Chr4:77575150-77575169 MsG0480022855.01.T01:intron 40.0%
ATGTCCCACAATATCCAAAC+AGG - Chr4:77577022-77577041 MsG0480022855.01.T01:intron 40.0%
CAACCTGTTTGCGTTATTAC+TGG - Chr4:77577636-77577655 MsG0480022855.01.T01:intron 40.0%
CAGCCAGTAATAAGGAAGAA+AGG - Chr4:77575872-77575891 MsG0480022855.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + Chr4:77576865-77576884 None:intergenic 40.0%
CATCAAGAAAGGCTCTTACT+TGG + Chr4:77577670-77577689 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + Chr4:77576834-77576853 None:intergenic 40.0%
CTGAAACAAAGCCTATACCA+AGG + Chr4:77576549-77576568 None:intergenic 40.0%
CTGTAAGAGCTATTGCATGA+GGG - Chr4:77578551-77578570 MsG0480022855.01.T01:intron 40.0%
CTGTCCTGTTTGGATATTGT+GGG + Chr4:77577029-77577048 None:intergenic 40.0%
GAGTACCCACAACTAAGTAA+GGG - Chr4:77576760-77576779 MsG0480022855.01.T01:intron 40.0%
GCTCTCACAAATAATCTCAC+AGG + Chr4:77575385-77575404 None:intergenic 40.0%
GGAGAAGAAAATGTCACAAG+AGG - Chr4:77575898-77575917 MsG0480022855.01.T01:intron 40.0%
GGTAACTCTTACAAATGGGT+AGG - Chr4:77577408-77577427 MsG0480022855.01.T01:intron 40.0%
GGTACAATGGCTATAGACAA+AGG + Chr4:77577774-77577793 None:intergenic 40.0%
GTGTATTTGTGCTCATCTAG+TGG - Chr4:77575351-77575370 MsG0480022855.01.T01:intron 40.0%
GTTGTTGTCATGTGACTGTA+AGG + Chr4:77576910-77576929 None:intergenic 40.0%
TATCTACTAGCATAAGCACC+TGG + Chr4:77575632-77575651 None:intergenic 40.0%
TCGCCTTTCTTCCTTATTAC+TGG + Chr4:77575878-77575897 None:intergenic 40.0%
TGTAAGAGCTATTGCATGAG+GGG - Chr4:77578552-77578571 MsG0480022855.01.T01:intron 40.0%
TGTAGGAATGAGTGGAGTAT+GGG - Chr4:77577188-77577207 MsG0480022855.01.T01:intron 40.0%
TTAGATCAAACCACTGCAGA+AGG + Chr4:77578074-77578093 None:intergenic 40.0%
TTAGGTTTAGGAAAGGAGGA+TGG - Chr4:77576696-77576715 MsG0480022855.01.T01:intron 40.0%
TTCATCACGATTCAAACCTC+AGG - Chr4:77579038-77579057 MsG0480022855.01.T01:intron 40.0%
TTGTAGGAATGAGTGGAGTA+TGG - Chr4:77577187-77577206 MsG0480022855.01.T01:intron 40.0%
! AACATCATAGTGGGGAAAAC+TGG + Chr4:77578122-77578141 None:intergenic 40.0%
! AGAGTACCCACAACTAAGTA+AGG - Chr4:77576759-77576778 MsG0480022855.01.T01:intron 40.0%
! CATATTATGAAGGCATGTGG+TGG + Chr4:77577367-77577386 None:intergenic 40.0%
! GGGAGTTGGTTAATGATAGT+AGG - Chr4:77578602-77578621 MsG0480022855.01.T01:CDS 40.0%
! GTCGATCTCTTTTTCTTGGT+TGG + Chr4:77578811-77578830 None:intergenic 40.0%
! GTTTTGTGGCTGTTCTTCAT+CGG + Chr4:77574958-77574977 None:intergenic 40.0%
! TCGCATATTATGAAGGCATG+TGG + Chr4:77577370-77577389 None:intergenic 40.0%
! TTTTGTGGCTGTTCTTCATC+GGG + Chr4:77574957-77574976 None:intergenic 40.0%
!! AAAAGCATTCATGTGGGAGT+TGG - Chr4:77578588-77578607 MsG0480022855.01.T01:CDS 40.0%
!! CTTTTAGAAGCTGCTCAAAC+AGG - Chr4:77575926-77575945 MsG0480022855.01.T01:intron 40.0%
!! GACCATAATCAGGTGTTGTT+TGG + Chr4:77575823-77575842 None:intergenic 40.0%
!! GGGATTATTTTGCAGCATTC+TGG - Chr4:77578714-77578733 MsG0480022855.01.T01:CDS 40.0%
!! GGTATAGGCTTTGTTTCAGA+TGG - Chr4:77576550-77576569 MsG0480022855.01.T01:intron 40.0%
!! TTACACAAGAGGCTGTTTCT+AGG - Chr4:77576870-77576889 MsG0480022855.01.T01:intron 40.0%
!!! TCTAGCTTTTCAGAGAGAGA+TGG - Chr4:77578391-77578410 MsG0480022855.01.T01:CDS 40.0%
!!! TTTTGGCTCAGCCAGTAATA+AGG - Chr4:77575864-77575883 MsG0480022855.01.T01:intron 40.0%
AAGAAAGGCTCTTACTTGGC+AGG + Chr4:77577666-77577685 None:intergenic 45.0%
AATTCTACGAAACCGAGCCA+AGG + Chr4:77578869-77578888 None:intergenic 45.0%
ACAACTAAGTAAGGGCAACC+CGG - Chr4:77576768-77576787 MsG0480022855.01.T01:intron 45.0%
ACATTCCAAAGGAAGGACCT+TGG - Chr4:77576529-77576548 MsG0480022855.01.T01:intron 45.0%
ACTGGACACATTCCAAAGGA+AGG - Chr4:77576522-77576541 MsG0480022855.01.T01:intron 45.0%
AGCTCTCAAAGCAACCTACA+AGG - Chr4:77575229-77575248 MsG0480022855.01.T01:intron 45.0%
ATCGTGATGAAGCACAGCAA+TGG + Chr4:77579029-77579048 None:intergenic 45.0%
CAAAGGAAGGACCTTGGTAT+AGG - Chr4:77576535-77576554 MsG0480022855.01.T01:intron 45.0%
CACGATTCAAACCTCAGGTT+GGG - Chr4:77579043-77579062 MsG0480022855.01.T01:intron 45.0%
CAGTAATCTTGGGTCTTCTG+TGG - Chr4:77579100-77579119 MsG0480022855.01.T01:intron 45.0%
CCAAGAAGAAGCTGAAATCG+CGG - Chr4:77574801-77574820 MsG0480022855.01.T01:intron 45.0%
CCACAATATCCAAACAGGAC+AGG - Chr4:77577027-77577046 MsG0480022855.01.T01:intron 45.0%
CCTGTCCTGTTTGGATATTG+TGG + Chr4:77577030-77577049 None:intergenic 45.0%
CTACTTCAACCTGTCCTGTT+TGG + Chr4:77577039-77577058 None:intergenic 45.0%
CTATACCAAGGTCCTTCCTT+TGG + Chr4:77576537-77576556 None:intergenic 45.0%
GAATGGCTTCTCTTTCAGCT+TGG + Chr4:77575205-77575224 None:intergenic 45.0%
GAGATCGAATCTTCTACTGC+TGG - Chr4:77574657-77574676 MsG0480022855.01.T01:CDS 45.0%
GAGGCCTGTTTCAGTAATCT+TGG - Chr4:77579089-77579108 MsG0480022855.01.T01:intron 45.0%
GATGCTCAACTTGCGTCATT+TGG - Chr4:77578252-77578271 MsG0480022855.01.T01:CDS 45.0%
GCGTACAATACACCAAATGG+TGG + Chr4:77576835-77576854 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + Chr4:77576838-77576857 None:intergenic 45.0%
GCTGTAAGAGCTATTGCATG+AGG - Chr4:77578550-77578569 MsG0480022855.01.T01:intron 45.0%
GGTTGCCCTTACTTAGTTGT+GGG + Chr4:77576768-77576787 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+CGG + Chr4:77576904-77576923 None:intergenic 45.0%
GTTTAGGAAAGGAGGATGGA+TGG - Chr4:77576700-77576719 MsG0480022855.01.T01:intron 45.0%
TACAGCTTGACGTGTAGAGT+TGG + Chr4:77578536-77578555 None:intergenic 45.0%
TCACGATTCAAACCTCAGGT+TGG - Chr4:77579042-77579061 MsG0480022855.01.T01:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG + Chr4:77576903-77576922 None:intergenic 45.0%
TCCAACAATAGTATGTGCCC+TGG + Chr4:77578316-77578335 None:intergenic 45.0%
TCCAGGGCACATACTATTGT+TGG - Chr4:77578312-77578331 MsG0480022855.01.T01:CDS 45.0%
TTCAGCTTGGCGAACAATGA+CGG + Chr4:77575192-77575211 None:intergenic 45.0%
TTGGAGAGAGAGTTACGTCT+TGG + Chr4:77574849-77574868 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr4:77577553-77577572 None:intergenic 45.0%
! ACACTTAGTTGTGGGTACTG+AGG + Chr4:77576957-77576976 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr4:77577554-77577573 None:intergenic 45.0%
!! ACTTAGTTGTGGGTACTGAG+GGG + Chr4:77576955-77576974 None:intergenic 45.0%
!! AGATGAATTGTTCTGGGGTC+AGG - Chr4:77574744-77574763 MsG0480022855.01.T01:intron 45.0%
!! ATTTTGGTGTGGTGTAACCC+GGG + Chr4:77574227-77574246 None:intergenic 45.0%
!! CACTTAGTTGTGGGTACTGA+GGG + Chr4:77576956-77576975 None:intergenic 45.0%
!! CATTTTGGTGTGGTGTAACC+CGG + Chr4:77574228-77574247 None:intergenic 45.0%
ACATCCACATGATCGGTCCT+TGG - Chr4:77578849-77578868 MsG0480022855.01.T01:five_prime_UTR 50.0%
ATATCCTGGGAAGGCGACAT+TGG - Chr4:77575013-77575032 MsG0480022855.01.T01:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr4:77576926-77576945 MsG0480022855.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr4:77577552-77577571 MsG0480022855.01.T01:intron 50.0%
CCGCGATTTCAGCTTCTTCT+TGG + Chr4:77574804-77574823 None:intergenic 50.0%
CGAGGTTGAAGATGGCATGT+TGG - Chr4:77577387-77577406 MsG0480022855.01.T01:intron 50.0%
CGCACATTCTTGAGACGTTG+TGG + Chr4:77576315-77576334 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr4:77577549-77577568 None:intergenic 50.0%
GCGATTGGTATATCCTGGGA+AGG - Chr4:77575004-77575023 MsG0480022855.01.T01:intron 50.0%
GGGTTGCCCTTACTTAGTTG+TGG + Chr4:77576769-77576788 None:intergenic 50.0%
GGTACCGTGATCCAAAGACT+GGG - Chr4:77577827-77577846 MsG0480022855.01.T01:intron 50.0%
GTGGGCATACTGAGATGGAT+AGG - Chr4:77577215-77577234 MsG0480022855.01.T01:intron 50.0%
TATAGCCGACCCCACTTAGT+GGG - Chr4:77577541-77577560 MsG0480022855.01.T01:intron 50.0%
TTACGCCCGAACCTTCTCTT+GGG + Chr4:77574553-77574572 None:intergenic 50.0%
TTATAGCCGACCCCACTTAG+TGG - Chr4:77577540-77577559 MsG0480022855.01.T01:intron 50.0%
! AGGTACCGTGATCCAAAGAC+TGG - Chr4:77577826-77577845 MsG0480022855.01.T01:intron 50.0%
! ATTGGGTGAAGGCACATGCA+TGG + Chr4:77578368-77578387 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr4:77577555-77577574 None:intergenic 50.0%
! GCGAACAATGACGGAAGTTC+TGG + Chr4:77575183-77575202 None:intergenic 50.0%
! GGTACTGTGCCGATACGATA+CGG + Chr4:77574206-77574225 None:intergenic 50.0%
! GTACTGTGCCGATACGATAC+GGG + Chr4:77574205-77574224 None:intergenic 50.0%
! TATCGTATCGGCACAGTACC+CGG - Chr4:77574206-77574225 MsG0480022855.01.T02:three_prime_UTR 50.0%
!! TGCTTTGAGAGCTTCGCGAA+TGG + Chr4:77575222-77575241 None:intergenic 50.0%
!!! GGAGCGAGTTTTAGCTAGAG+AGG - Chr4:77576079-77576098 MsG0480022855.01.T01:intron 50.0%
CAACCAGGACGATGATGCGA+AGG - Chr4:77575136-77575155 MsG0480022855.01.T01:intron 55.0%
CACATGATCGGTCCTTGGCT+CGG - Chr4:77578854-77578873 MsG0480022855.01.T01:five_prime_UTR 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr4:77577547-77577566 MsG0480022855.01.T01:intron 55.0%
CTTACGCCCGAACCTTCTCT+TGG + Chr4:77574554-77574573 None:intergenic 55.0%
GACGAGTGGGCATACTGAGA+TGG - Chr4:77577210-77577229 MsG0480022855.01.T01:intron 55.0%
GAGTGGAGTATGGGACGAGT+GGG - Chr4:77577197-77577216 MsG0480022855.01.T01:intron 55.0%
GCAGCCCAGTCTTTGGATCA+CGG + Chr4:77577834-77577853 None:intergenic 55.0%
GGCTGTTCTTCATCGGGTTC+AGG + Chr4:77574951-77574970 None:intergenic 55.0%
GGTCTGCAGTCATCCTCCTA+TGG + Chr4:77578101-77578120 None:intergenic 55.0%
TACGCCCGAACCTTCTCTTG+GGG + Chr4:77574552-77574571 None:intergenic 55.0%
TGAGTGGAGTATGGGACGAG+TGG - Chr4:77577196-77577215 MsG0480022855.01.T01:intron 55.0%
TTAGCCAATGTCGCCTTCCC+AGG + Chr4:77575020-77575039 None:intergenic 55.0%
! ATCGTATCGGCACAGTACCC+GGG - Chr4:77574207-77574226 MsG0480022855.01.T02:three_prime_UTR 55.0%
!! TGGGTACTGAGGGGTAACCT+TGG + Chr4:77576946-77576965 None:intergenic 55.0%
ACTGAAGCTCCCGCATACGC+AGG - Chr4:77576794-77576813 MsG0480022855.01.T01:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + Chr4:77576937-77576956 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + Chr4:77576790-77576809 None:intergenic 60.0%
CAGGAAGGGGTCCCACCATT+TGG - Chr4:77576820-77576839 MsG0480022855.01.T01:intron 60.0%
CATACGCAGGGTCCAGGAAG+GGG - Chr4:77576807-77576826 MsG0480022855.01.T01:intron 60.0%
CCAGGACGATGATGCGAAGG+AGG - Chr4:77575139-77575158 MsG0480022855.01.T01:intron 60.0%
CCTCCTTCGCATCATCGTCC+TGG + Chr4:77575142-77575161 None:intergenic 60.0%
CGAGCCAAGGACCGATCATG+TGG + Chr4:77578856-77578875 None:intergenic 60.0%
CGTGCATCTCGAGCGACAAG+AGG - Chr4:77574682-77574701 MsG0480022855.01.T01:intron 60.0%
CTGAAGCTCCCGCATACGCA+GGG - Chr4:77576795-77576814 MsG0480022855.01.T01:intron 60.0%
CTTCCTGGACCCTGCGTATG+CGG + Chr4:77576807-77576826 None:intergenic 60.0%
GCATACGCAGGGTCCAGGAA+GGG - Chr4:77576806-77576825 MsG0480022855.01.T01:intron 60.0%
GCGTATGGCAGCCCAGTCTT+TGG + Chr4:77577841-77577860 None:intergenic 60.0%
GTGGGCCCCAAGAGAAGGTT+CGG - Chr4:77574544-77574563 MsG0480022855.01.T01:CDS 60.0%
TGAGAGTGGGCCCCAAGAGA+AGG - Chr4:77574539-77574558 MsG0480022855.01.T01:CDS 60.0%
TGGGCCCCAAGAGAAGGTTC+GGG - Chr4:77574545-77574564 MsG0480022855.01.T01:CDS 60.0%
TTCCTGGACCCTGCGTATGC+GGG + Chr4:77576806-77576825 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+TGG + Chr4:77576822-77576841 None:intergenic 60.0%
CGCATACGCAGGGTCCAGGA+AGG - Chr4:77576805-77576824 MsG0480022855.01.T01:intron 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + Chr4:77576789-77576808 None:intergenic 65.0%
CTCCCGCATACGCAGGGTCC+AGG - Chr4:77576801-77576820 MsG0480022855.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 77574199 77579223 77574199 ID=MsG0480022855.01;Name=MsG0480022855.01
Chr4 mRNA 77574219 77579223 77574219 ID=MsG0480022855.01.T01;Parent=MsG0480022855.01;Name=MsG0480022855.01.T01;_AED=0.36;_eAED=0.36;_QI=149|1|1|1|0.77|0.6|10|205|363
Chr4 exon 77574219 77574415 77574219 ID=MsG0480022855.01.T01:exon:11126;Parent=MsG0480022855.01.T01
Chr4 exon 77574496 77574693 77574496 ID=MsG0480022855.01.T01:exon:11125;Parent=MsG0480022855.01.T01
Chr4 five_prime_UTR 77579171 77579223 77579171 ID=MsG0480022855.01.T01:five_prime_utr;Parent=MsG0480022855.01.T01
Chr4 five_prime_UTR 77578795 77578890 77578795 ID=MsG0480022855.01.T01:five_prime_utr;Parent=MsG0480022855.01.T01
Chr4 CDS 77578570 77578794 77578570 ID=MsG0480022855.01.T01:cds;Parent=MsG0480022855.01.T01
Chr4 CDS 77578172 77578477 77578172 ID=MsG0480022855.01.T01:cds;Parent=MsG0480022855.01.T01
Chr4 CDS 77577475 77577547 77577475 ID=MsG0480022855.01.T01:cds;Parent=MsG0480022855.01.T01
Chr4 CDS 77577246 77577365 77577246 ID=MsG0480022855.01.T01:cds;Parent=MsG0480022855.01.T01
Chr4 CDS 77577093 77577161 77577093 ID=MsG0480022855.01.T01:cds;Parent=MsG0480022855.01.T01
Chr4 CDS 77575752 77575794 77575752 ID=MsG0480022855.01.T01:cds;Parent=MsG0480022855.01.T01
Chr4 CDS 77575529 77575594 77575529 ID=MsG0480022855.01.T01:cds;Parent=MsG0480022855.01.T01
Chr4 CDS 77574504 77574693 77574504 ID=MsG0480022855.01.T01:cds;Parent=MsG0480022855.01.T01
Chr4 three_prime_UTR 77574496 77574503 77574496 ID=MsG0480022855.01.T01:three_prime_utr;Parent=MsG0480022855.01.T01
Chr4 three_prime_UTR 77574219 77574415 77574219 ID=MsG0480022855.01.T01:three_prime_utr;Parent=MsG0480022855.01.T01
Chr4 mRNA 77574199 77579223 77574199 ID=MsG0480022855.01.T02;Parent=MsG0480022855.01;Name=MsG0480022855.01.T02;_AED=0.35;_eAED=0.35;_QI=149|1|1|1|0.87|0.77|9|305|363
Chr4 exon 77574199 77574693 77574199 ID=MsG0480022855.01.T02:exon:11127;Parent=MsG0480022855.01.T02
Chr4 five_prime_UTR 77579171 77579223 77579171 ID=MsG0480022855.01.T02:five_prime_utr;Parent=MsG0480022855.01.T02
Chr4 five_prime_UTR 77578795 77578890 77578795 ID=MsG0480022855.01.T02:five_prime_utr;Parent=MsG0480022855.01.T02
Chr4 CDS 77578570 77578794 77578570 ID=MsG0480022855.01.T02:cds;Parent=MsG0480022855.01.T02
Chr4 CDS 77578172 77578477 77578172 ID=MsG0480022855.01.T02:cds;Parent=MsG0480022855.01.T02
Chr4 CDS 77577475 77577547 77577475 ID=MsG0480022855.01.T02:cds;Parent=MsG0480022855.01.T02
Chr4 CDS 77577246 77577365 77577246 ID=MsG0480022855.01.T02:cds;Parent=MsG0480022855.01.T02
Chr4 CDS 77577093 77577161 77577093 ID=MsG0480022855.01.T02:cds;Parent=MsG0480022855.01.T02
Chr4 CDS 77575752 77575794 77575752 ID=MsG0480022855.01.T02:cds;Parent=MsG0480022855.01.T02
Chr4 CDS 77575529 77575594 77575529 ID=MsG0480022855.01.T02:cds;Parent=MsG0480022855.01.T02
Chr4 CDS 77574504 77574693 77574504 ID=MsG0480022855.01.T02:cds;Parent=MsG0480022855.01.T02
Chr4 three_prime_UTR 77574199 77574503 77574199 ID=MsG0480022855.01.T02:three_prime_utr;Parent=MsG0480022855.01.T02
Gene Sequence

>MsG0480022855.01.T02

ATGGAGGAAAAGAATTCAGGCGAAGAAGAGAGATCGAATCTTCTACTGCTGGATCGTGCATCTCGAGCGACAAGAGGTAAACGTCTTTCGAAGCTTCTCGACGACGAAGTTCAACAAGATGAATTGTTCTGGGGTCAGGATGCTCTCAAAGAAGAAGACGAAGACGATAACTACCAAGAAGAAGCTGAAATCGCGGACGAATTCGACTCCGATTTCGACCAAGACGAGCCTGAACCCGATGAAGAACAGCCACAAAACGATGATGAAAGAATGAATAAAAAGAAGCGATTGGTATATCCTGGGAAGGCGACATTGGCTAAAAAGAAGAAAAAGAAGAAAATCTTATCTAATTTGGATGATCCTCCCAAAATTGATGATAATGATGACGGAGATGATGATAAAAACAACAAGAACAACAACCAGGACGATGATGCGAAGGAGGTAATGATTAGGAAGTCTACCAGAACTTCCGTCATTGTTCGCCAAGCTGAAAGAGAAGCCATTCGCGAAGCTCTCAAAGCAACCTACAAGCCAGTAATAAGGAAGAAAGGCGAGGAGAAGAAAATGTCACAAGAGGAGATGCTTTTAGAAGCTGCTCAAACAGAAATTATGAACTTGAGGAATTTGGAGCGAGTTTTAGCTAGAGAGGAAGAAGTTAAGAGAAGAGCTATTGTGCATAAAACTGTCTTTAATGGTCCACAGATACACTACATATCACAAAATGGTTGTTCGTATTTGGAGTTTACTAAAGGGGCATCATTTCACTCAGATATTGCCACAACGTCTCAAGAATATCCAGAACAACCTGTTTGCGTTATTACTGGTTTGCCTGCCAAGTACCGTGATCCAAAGACTGGGCTGCCATACGCTACAAAAGAAGCTTTTAAAATAATTCGACAACGCATTCTGGATGAAAGTGCAAACTCTAGAAAAGAAACGAATATGGGAGGCTTATATGATTCAGTTTCTGGATATGGTTTTCCAACCAAGAAAAAGAGATCGACAATGCGAGATAAAAATATACATCCACATGATCGGTCCTTGGCTCGGTTTCGTAGAATTCCTACTTTTGAGGATGAAGATTCTGACTAA

>MsG0480022855.01.T01

ATGGAGGAAAAGAATTCAGGCGAAGAAGAGAGATCGAATCTTCTACTGCTGGATCGTGCATCTCGAGCGACAAGAGGTAAACGTCTTTCGAAGCTTCTCGACGACGAAGTTCAACAAGATGAATTGTTCTGGGGTCAGGATGCTCTCAAAGAAGAAGACGAAGACGATAACTACCAAGAAGAAGCTGAAATCGCGGACGAATTCGACTCCGATTTCGACCAAGACGAGCCTGAACCCGATGAAGAACAGCCACAAAACGATGATGAAAGAATGAATAAAAAGAAGCGATTGGTATATCCTGGGAAGGCGACATTGGCTAAAAAGAAGAAAAAGAAGAAAATCTTATCTAATTTGGATGATCCTCCCAAAATTGATGATAATGATGACGGAGATGATGATAAAAACAACAAGAACAACAACCAGGACGATGATGCGAAGGAGGTAATGATTAGGAAGTCTACCAGAACTTCCGTCATTGTTCGCCAAGCTGAAAGAGAAGCCATTCGCGAAGCTCTCAAAGCAACCTACAAGCCAGTAATAAGGAAGAAAGGCGAGGAGAAGAAAATGTCACAAGAGGAGATGCTTTTAGAAGCTGCTCAAACAGAAATTATGAACTTGAGGAATTTGGAGCGAGTTTTAGCTAGAGAGGAAGAAGTTAAGAGAAGAGCTATTGTGCATAAAACTGTCTTTAATGGTCCACAGATACACTACATATCACAAAATGGTTGTTCGTATTTGGAGTTTACTAAAGGGGCATCATTTCACTCAGATATTGCCACAACGTCTCAAGAATATCCAGAACAACCTGTTTGCGTTATTACTGGTTTGCCTGCCAAGTACCGTGATCCAAAGACTGGGCTGCCATACGCTACAAAAGAAGCTTTTAAAATAATTCGACAACGCATTCTGGATGAAAGTGCAAACTCTAGAAAAGAAACGAATATGGGAGGCTTATATGATTCAGTTTCTGGATATGGTTTTCCAACCAAGAAAAAGAGATCGACAATGCGAGATAAAAATATACATCCACATGATCGGTCCTTGGCTCGGTTTCGTAGAATTCCTACTTTTGAGGATGAAGATTCTGACTAA

Protein sequence

>MsG0480022855.01.T02

MEEKNSGEEERSNLLLLDRASRATRGKRLSKLLDDEVQQDELFWGQDALKEEDEDDNYQEEAEIADEFDSDFDQDEPEPDEEQPQNDDERMNKKKRLVYPGKATLAKKKKKKKILSNLDDPPKIDDNDDGDDDKNNKNNNQDDDAKEVMIRKSTRTSVIVRQAEREAIREALKATYKPVIRKKGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKRRAIVHKTVFNGPQIHYISQNGCSYLEFTKGASFHSDIATTSQEYPEQPVCVITGLPAKYRDPKTGLPYATKEAFKIIRQRILDESANSRKETNMGGLYDSVSGYGFPTKKKRSTMRDKNIHPHDRSLARFRRIPTFEDEDSD*

>MsG0480022855.01.T01

MEEKNSGEEERSNLLLLDRASRATRGKRLSKLLDDEVQQDELFWGQDALKEEDEDDNYQEEAEIADEFDSDFDQDEPEPDEEQPQNDDERMNKKKRLVYPGKATLAKKKKKKKILSNLDDPPKIDDNDDGDDDKNNKNNNQDDDAKEVMIRKSTRTSVIVRQAEREAIREALKATYKPVIRKKGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKRRAIVHKTVFNGPQIHYISQNGCSYLEFTKGASFHSDIATTSQEYPEQPVCVITGLPAKYRDPKTGLPYATKEAFKIIRQRILDESANSRKETNMGGLYDSVSGYGFPTKKKRSTMRDKNIHPHDRSLARFRRIPTFEDEDSD*