Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045837.01.T02 | XP_003629582.2 | 90.4 | 375 | 30 | 2 | 1 | 374 | 1 | 370 | 0 | 686 |
MsG0880045837.01.T01 | XP_003629582.2 | 90 | 370 | 30 | 2 | 1 | 363 | 1 | 370 | 0 | 675 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045837.01.T01 | Q9SND9 | 37.568 | 370 | 211 | 12 | 1 | 358 | 1 | 362 | 3.68E-69 | 226 |
MsG0880045837.01.T02 | Q9SND9 | 36.412 | 379 | 214 | 12 | 1 | 369 | 1 | 362 | 1.69E-67 | 223 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045837.01.T01 | A0A396GP05 | 90.000 | 370 | 30 | 2 | 1 | 363 | 1 | 370 | 0.0 | 675 |
MsG0880045837.01.T02 | A0A396GP05 | 90.400 | 375 | 30 | 2 | 1 | 374 | 1 | 370 | 0.0 | 686 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045837.01.T02 | MTR_8g079710 | 90.133 | 375 | 31 | 2 | 1 | 374 | 1 | 370 | 0.0 | 681 |
MsG0880045837.01.T02 | MTR_4g094828 | 72.021 | 386 | 92 | 4 | 1 | 377 | 1 | 379 | 0.0 | 550 |
MsG0880045837.01.T02 | MTR_4g022290 | 73.087 | 379 | 95 | 5 | 1 | 377 | 1 | 374 | 0.0 | 547 |
MsG0880045837.01.T02 | MTR_4g094835 | 57.412 | 371 | 140 | 8 | 1 | 363 | 1 | 361 | 3.48e-142 | 411 |
MsG0880045837.01.T02 | MTR_4g094842 | 56.842 | 380 | 131 | 10 | 1 | 363 | 1 | 364 | 3.31e-135 | 394 |
MsG0880045837.01.T02 | MTR_0190s0020 | 51.482 | 371 | 159 | 5 | 1 | 363 | 1 | 358 | 5.02e-130 | 380 |
MsG0880045837.01.T02 | MTR_8g041770 | 52.830 | 371 | 153 | 7 | 1 | 363 | 1 | 357 | 8.17e-124 | 364 |
MsG0880045837.01.T02 | MTR_3g088420 | 52.561 | 371 | 151 | 8 | 1 | 365 | 1 | 352 | 3.09e-123 | 363 |
MsG0880045837.01.T02 | MTR_3g026310 | 50.258 | 388 | 155 | 8 | 1 | 369 | 1 | 369 | 1.74e-122 | 361 |
MsG0880045837.01.T02 | MTR_4g022800 | 50.663 | 377 | 153 | 8 | 1 | 363 | 1 | 358 | 1.05e-120 | 357 |
MsG0880045837.01.T02 | MTR_4g094838 | 52.674 | 374 | 140 | 9 | 4 | 365 | 1 | 349 | 1.51e-118 | 350 |
MsG0880045837.01.T02 | MTR_4g022670 | 49.602 | 377 | 157 | 8 | 1 | 363 | 1 | 358 | 1.48e-117 | 348 |
MsG0880045837.01.T02 | MTR_7g026860 | 50.133 | 377 | 155 | 8 | 1 | 363 | 1 | 358 | 1.90e-117 | 348 |
MsG0880045837.01.T02 | MTR_4g022720 | 51.213 | 371 | 154 | 8 | 1 | 363 | 1 | 352 | 3.40e-117 | 347 |
MsG0880045837.01.T02 | MTR_4g022825 | 49.734 | 376 | 157 | 8 | 1 | 363 | 1 | 357 | 4.20e-115 | 342 |
MsG0880045837.01.T02 | MTR_4g022760 | 49.867 | 377 | 156 | 8 | 1 | 363 | 1 | 358 | 4.93e-115 | 340 |
MsG0880045837.01.T02 | MTR_4g094832 | 58.224 | 304 | 109 | 6 | 76 | 371 | 60 | 353 | 1.68e-111 | 333 |
MsG0880045837.01.T02 | MTR_6g016815 | 40.476 | 378 | 155 | 9 | 1 | 373 | 15 | 327 | 1.50e-79 | 249 |
MsG0880045837.01.T02 | MTR_8g040760 | 55.760 | 217 | 88 | 4 | 1 | 212 | 1 | 214 | 3.36e-73 | 227 |
MsG0880045837.01.T02 | MTR_3g101930 | 37.197 | 371 | 195 | 11 | 21 | 369 | 22 | 376 | 7.08e-65 | 213 |
MsG0880045837.01.T02 | MTR_3g101900 | 38.068 | 352 | 188 | 11 | 28 | 365 | 29 | 364 | 1.08e-64 | 213 |
MsG0880045837.01.T02 | MTR_4g094825 | 57.672 | 189 | 72 | 5 | 20 | 202 | 83 | 269 | 1.90e-62 | 205 |
MsG0880045837.01.T02 | MTR_3g102010 | 37.673 | 361 | 194 | 11 | 21 | 365 | 22 | 367 | 8.89e-62 | 205 |
MsG0880045837.01.T02 | MTR_3g101970 | 36.769 | 359 | 187 | 11 | 21 | 365 | 21 | 353 | 1.32e-61 | 204 |
MsG0880045837.01.T02 | MTR_3g102020 | 36.915 | 363 | 195 | 11 | 21 | 365 | 21 | 367 | 4.54e-61 | 203 |
MsG0880045837.01.T02 | MTR_7g026850 | 61.538 | 156 | 57 | 3 | 28 | 182 | 7 | 160 | 9.58e-60 | 191 |
MsG0880045837.01.T02 | MTR_3g101960 | 36.464 | 362 | 197 | 11 | 21 | 365 | 21 | 366 | 6.06e-59 | 198 |
MsG0880045837.01.T02 | MTR_3g070170 | 32.791 | 369 | 214 | 6 | 21 | 363 | 25 | 385 | 3.30e-50 | 175 |
MsG0880045837.01.T02 | MTR_6g034495 | 63.158 | 114 | 40 | 1 | 70 | 181 | 45 | 158 | 1.81e-44 | 151 |
MsG0880045837.01.T02 | MTR_5g081960 | 29.367 | 395 | 215 | 11 | 21 | 363 | 19 | 401 | 1.33e-42 | 155 |
MsG0880045837.01.T02 | MTR_4g015180 | 33.333 | 342 | 174 | 9 | 21 | 313 | 19 | 355 | 6.20e-42 | 153 |
MsG0880045837.01.T02 | MTR_7g026770 | 41.624 | 197 | 88 | 4 | 146 | 342 | 132 | 301 | 1.66e-39 | 142 |
MsG0880045837.01.T02 | MTR_7g026830 | 67.442 | 86 | 28 | 0 | 85 | 170 | 12 | 97 | 1.42e-35 | 125 |
MsG0880045837.01.T02 | MTR_3g102030 | 31.922 | 307 | 158 | 13 | 70 | 365 | 17 | 283 | 1.52e-34 | 130 |
MsG0880045837.01.T02 | MTR_8g040780 | 44.172 | 163 | 71 | 5 | 202 | 363 | 2 | 145 | 3.70e-30 | 116 |
MsG0880045837.01.T02 | MTR_6g034485 | 40.876 | 137 | 66 | 3 | 191 | 324 | 1 | 125 | 5.94e-29 | 109 |
MsG0880045837.01.T02 | MTR_6g045553 | 28.045 | 353 | 188 | 9 | 4 | 313 | 14 | 343 | 4.46e-27 | 112 |
MsG0880045837.01.T02 | MTR_8g075610 | 27.500 | 320 | 177 | 13 | 59 | 356 | 47 | 333 | 2.30e-23 | 100 |
MsG0880045837.01.T02 | MTR_8g096530 | 28.896 | 308 | 198 | 12 | 57 | 357 | 57 | 350 | 7.10e-22 | 97.1 |
MsG0880045837.01.T02 | MTR_2g105330 | 28.309 | 272 | 152 | 11 | 59 | 313 | 56 | 301 | 1.56e-20 | 92.8 |
MsG0880045837.01.T02 | MTR_4g007540 | 28.205 | 273 | 152 | 11 | 59 | 313 | 56 | 302 | 2.22e-20 | 92.4 |
MsG0880045837.01.T02 | MTR_2g064495 | 28.309 | 272 | 152 | 11 | 59 | 313 | 56 | 301 | 4.00e-20 | 91.7 |
MsG0880045837.01.T02 | MTR_3g026950 | 25.846 | 325 | 204 | 13 | 44 | 346 | 36 | 345 | 1.41e-19 | 90.1 |
MsG0880045837.01.T02 | MTR_3g098980 | 27.719 | 285 | 167 | 12 | 59 | 328 | 66 | 326 | 1.02e-17 | 84.7 |
MsG0880045837.01.T02 | MTR_1g040175 | 25.333 | 300 | 187 | 11 | 45 | 328 | 45 | 323 | 6.40e-17 | 82.4 |
MsG0880045837.01.T02 | MTR_1g040195 | 26.946 | 334 | 193 | 15 | 30 | 350 | 23 | 318 | 1.00e-16 | 81.6 |
MsG0880045837.01.T02 | MTR_7g114470 | 23.676 | 321 | 189 | 10 | 30 | 319 | 25 | 320 | 2.03e-16 | 80.9 |
MsG0880045837.01.T02 | MTR_3g049150 | 24.484 | 339 | 194 | 13 | 46 | 356 | 38 | 342 | 2.20e-16 | 80.9 |
MsG0880045837.01.T02 | MTR_5g076700 | 23.511 | 319 | 191 | 10 | 30 | 319 | 24 | 318 | 4.55e-16 | 79.7 |
MsG0880045837.01.T02 | MTR_4g055170 | 28.528 | 326 | 192 | 14 | 46 | 356 | 56 | 355 | 6.72e-16 | 79.3 |
MsG0880045837.01.T02 | MTR_4g097090 | 25.843 | 356 | 208 | 19 | 29 | 356 | 30 | 357 | 1.25e-15 | 78.6 |
MsG0880045837.01.T02 | MTR_4g013050 | 25.175 | 286 | 161 | 10 | 57 | 334 | 51 | 291 | 2.89e-15 | 77.0 |
MsG0880045837.01.T02 | MTR_6g053810 | 29.617 | 287 | 176 | 12 | 53 | 328 | 65 | 336 | 7.05e-15 | 76.3 |
MsG0880045837.01.T02 | MTR_7g085990 | 25.000 | 320 | 217 | 9 | 49 | 354 | 45 | 355 | 9.81e-15 | 75.9 |
MsG0880045837.01.T02 | MTR_7g085930 | 25.623 | 281 | 182 | 9 | 49 | 312 | 49 | 319 | 1.17e-14 | 75.5 |
MsG0880045837.01.T02 | MTR_7g114550 | 23.782 | 349 | 211 | 16 | 30 | 350 | 24 | 345 | 1.21e-14 | 75.5 |
MsG0880045837.01.T02 | MTR_7g027175 | 29.310 | 290 | 173 | 10 | 49 | 326 | 58 | 327 | 1.27e-14 | 75.5 |
MsG0880045837.01.T02 | MTR_7g114520 | 23.148 | 324 | 200 | 11 | 30 | 326 | 25 | 326 | 2.50e-14 | 74.3 |
MsG0880045837.01.T02 | MTR_1g040215 | 25.387 | 323 | 195 | 13 | 30 | 328 | 23 | 323 | 4.10e-14 | 73.9 |
MsG0880045837.01.T02 | MTR_7g114560 | 28.415 | 183 | 106 | 7 | 30 | 196 | 24 | 197 | 2.01e-13 | 71.6 |
MsG0880045837.01.T02 | MTR_7g114490 | 22.254 | 346 | 220 | 13 | 30 | 350 | 24 | 345 | 4.51e-12 | 67.8 |
MsG0880045837.01.T02 | MTR_3g465980 | 26.165 | 279 | 178 | 9 | 59 | 326 | 68 | 329 | 4.86e-12 | 67.4 |
MsG0880045837.01.T02 | MTR_1g081660 | 23.492 | 315 | 184 | 11 | 29 | 313 | 31 | 318 | 7.53e-12 | 67.0 |
MsG0880045837.01.T01 | MTR_8g079710 | 89.730 | 370 | 31 | 2 | 1 | 363 | 1 | 370 | 0.0 | 671 |
MsG0880045837.01.T01 | MTR_4g022290 | 71.809 | 376 | 94 | 4 | 1 | 366 | 1 | 374 | 0.0 | 545 |
MsG0880045837.01.T01 | MTR_4g094828 | 71.916 | 381 | 90 | 4 | 1 | 366 | 1 | 379 | 0.0 | 544 |
MsG0880045837.01.T01 | MTR_4g094835 | 58.516 | 364 | 136 | 8 | 1 | 352 | 1 | 361 | 3.44e-143 | 414 |
MsG0880045837.01.T01 | MTR_4g094842 | 57.724 | 369 | 134 | 8 | 1 | 352 | 1 | 364 | 3.07e-138 | 401 |
MsG0880045837.01.T01 | MTR_0190s0020 | 52.778 | 360 | 160 | 4 | 1 | 352 | 1 | 358 | 3.98e-133 | 388 |
MsG0880045837.01.T01 | MTR_8g041770 | 54.167 | 360 | 154 | 6 | 1 | 352 | 1 | 357 | 6.54e-127 | 372 |
MsG0880045837.01.T01 | MTR_3g088420 | 53.889 | 360 | 152 | 7 | 1 | 354 | 1 | 352 | 1.80e-126 | 370 |
MsG0880045837.01.T01 | MTR_3g026310 | 51.459 | 377 | 156 | 7 | 1 | 358 | 1 | 369 | 1.06e-125 | 369 |
MsG0880045837.01.T01 | MTR_4g022800 | 51.913 | 366 | 154 | 7 | 1 | 352 | 1 | 358 | 1.08e-123 | 363 |
MsG0880045837.01.T01 | MTR_4g022670 | 50.273 | 366 | 160 | 7 | 1 | 352 | 1 | 358 | 1.61e-119 | 353 |
MsG0880045837.01.T01 | MTR_7g026860 | 50.820 | 366 | 158 | 7 | 1 | 352 | 1 | 358 | 3.41e-119 | 352 |
MsG0880045837.01.T01 | MTR_4g022720 | 51.944 | 360 | 157 | 7 | 1 | 352 | 1 | 352 | 4.16e-119 | 352 |
MsG0880045837.01.T01 | MTR_4g094838 | 53.406 | 367 | 137 | 9 | 4 | 354 | 1 | 349 | 4.91e-119 | 352 |
MsG0880045837.01.T01 | MTR_4g022825 | 50.959 | 365 | 158 | 7 | 1 | 352 | 1 | 357 | 2.26e-118 | 350 |
MsG0880045837.01.T01 | MTR_4g022760 | 50.546 | 366 | 159 | 7 | 1 | 352 | 1 | 358 | 1.18e-116 | 344 |
MsG0880045837.01.T01 | MTR_4g094832 | 59.259 | 297 | 106 | 6 | 76 | 360 | 60 | 353 | 5.26e-112 | 333 |
MsG0880045837.01.T01 | MTR_6g016815 | 41.144 | 367 | 157 | 8 | 1 | 362 | 15 | 327 | 1.33e-82 | 256 |
MsG0880045837.01.T01 | MTR_8g040760 | 55.760 | 217 | 88 | 4 | 1 | 212 | 1 | 214 | 2.44e-73 | 227 |
MsG0880045837.01.T01 | MTR_3g101930 | 38.056 | 360 | 196 | 10 | 21 | 358 | 22 | 376 | 5.72e-68 | 221 |
MsG0880045837.01.T01 | MTR_3g101900 | 38.123 | 341 | 192 | 9 | 28 | 354 | 29 | 364 | 1.89e-67 | 219 |
MsG0880045837.01.T01 | MTR_3g102010 | 38.571 | 350 | 195 | 10 | 21 | 354 | 22 | 367 | 6.41e-65 | 213 |
MsG0880045837.01.T01 | MTR_3g101970 | 36.782 | 348 | 191 | 9 | 21 | 354 | 21 | 353 | 2.88e-64 | 211 |
MsG0880045837.01.T01 | MTR_3g102020 | 37.784 | 352 | 196 | 10 | 21 | 354 | 21 | 367 | 3.12e-64 | 211 |
MsG0880045837.01.T01 | MTR_4g094825 | 57.672 | 189 | 72 | 5 | 20 | 202 | 83 | 269 | 2.30e-62 | 204 |
MsG0880045837.01.T01 | MTR_3g101960 | 37.322 | 351 | 198 | 10 | 21 | 354 | 21 | 366 | 4.77e-62 | 206 |
MsG0880045837.01.T01 | MTR_7g026850 | 61.538 | 156 | 57 | 3 | 28 | 182 | 7 | 160 | 6.80e-60 | 191 |
MsG0880045837.01.T01 | MTR_3g070170 | 31.978 | 369 | 206 | 6 | 21 | 352 | 25 | 385 | 2.35e-48 | 170 |
MsG0880045837.01.T01 | MTR_6g034495 | 63.158 | 114 | 40 | 1 | 70 | 181 | 45 | 158 | 1.44e-44 | 151 |
MsG0880045837.01.T01 | MTR_7g026770 | 43.548 | 186 | 89 | 3 | 146 | 331 | 132 | 301 | 1.51e-42 | 150 |
MsG0880045837.01.T01 | MTR_5g081960 | 29.114 | 395 | 205 | 11 | 21 | 352 | 19 | 401 | 9.83e-41 | 150 |
MsG0880045837.01.T01 | MTR_4g015180 | 31.287 | 342 | 170 | 8 | 21 | 302 | 19 | 355 | 9.79e-38 | 142 |
MsG0880045837.01.T01 | MTR_3g102030 | 32.770 | 296 | 159 | 12 | 70 | 354 | 17 | 283 | 6.67e-36 | 133 |
MsG0880045837.01.T01 | MTR_7g026830 | 67.442 | 86 | 28 | 0 | 85 | 170 | 12 | 97 | 1.05e-35 | 126 |
MsG0880045837.01.T01 | MTR_8g040780 | 46.053 | 152 | 73 | 4 | 202 | 352 | 2 | 145 | 3.90e-33 | 124 |
MsG0880045837.01.T01 | MTR_6g034485 | 43.651 | 126 | 67 | 2 | 191 | 313 | 1 | 125 | 6.13e-32 | 117 |
MsG0880045837.01.T01 | MTR_6g045553 | 28.406 | 345 | 186 | 9 | 4 | 302 | 14 | 343 | 1.17e-27 | 113 |
MsG0880045837.01.T01 | MTR_8g075610 | 27.832 | 309 | 179 | 12 | 59 | 345 | 47 | 333 | 1.65e-25 | 107 |
MsG0880045837.01.T01 | MTR_8g096530 | 29.545 | 308 | 185 | 13 | 57 | 346 | 57 | 350 | 8.76e-24 | 102 |
MsG0880045837.01.T01 | MTR_2g105330 | 28.736 | 261 | 154 | 10 | 59 | 302 | 56 | 301 | 4.97e-23 | 100 |
MsG0880045837.01.T01 | MTR_2g064495 | 28.736 | 261 | 154 | 10 | 59 | 302 | 56 | 301 | 1.36e-22 | 98.6 |
MsG0880045837.01.T01 | MTR_4g007540 | 28.244 | 262 | 155 | 10 | 59 | 302 | 56 | 302 | 1.18e-21 | 95.9 |
MsG0880045837.01.T01 | MTR_3g098980 | 28.467 | 274 | 168 | 11 | 59 | 317 | 66 | 326 | 2.59e-20 | 92.0 |
MsG0880045837.01.T01 | MTR_3g026950 | 25.857 | 321 | 198 | 13 | 44 | 335 | 36 | 345 | 8.61e-20 | 90.9 |
MsG0880045837.01.T01 | MTR_1g040175 | 26.298 | 289 | 187 | 11 | 45 | 317 | 45 | 323 | 1.08e-18 | 87.4 |
MsG0880045837.01.T01 | MTR_7g114470 | 24.839 | 310 | 188 | 10 | 30 | 308 | 25 | 320 | 3.44e-18 | 85.9 |
MsG0880045837.01.T01 | MTR_5g076700 | 24.675 | 308 | 190 | 10 | 30 | 308 | 24 | 318 | 5.68e-18 | 85.5 |
MsG0880045837.01.T01 | MTR_4g013050 | 26.182 | 275 | 161 | 9 | 57 | 323 | 51 | 291 | 1.20e-17 | 84.0 |
MsG0880045837.01.T01 | MTR_3g049150 | 25.076 | 331 | 191 | 13 | 46 | 345 | 38 | 342 | 2.03e-17 | 83.6 |
MsG0880045837.01.T01 | MTR_4g055170 | 28.391 | 317 | 193 | 13 | 46 | 345 | 56 | 355 | 8.34e-17 | 82.0 |
MsG0880045837.01.T01 | MTR_6g053810 | 29.856 | 278 | 176 | 11 | 53 | 317 | 65 | 336 | 2.66e-16 | 80.5 |
MsG0880045837.01.T01 | MTR_7g114550 | 25.148 | 338 | 209 | 16 | 30 | 339 | 24 | 345 | 4.09e-16 | 79.7 |
MsG0880045837.01.T01 | MTR_7g114520 | 23.962 | 313 | 200 | 11 | 30 | 315 | 25 | 326 | 7.42e-16 | 79.0 |
MsG0880045837.01.T01 | MTR_1g040215 | 26.282 | 312 | 195 | 13 | 30 | 317 | 23 | 323 | 1.51e-15 | 78.2 |
MsG0880045837.01.T01 | MTR_4g097090 | 25.215 | 349 | 208 | 18 | 29 | 345 | 30 | 357 | 1.73e-15 | 77.8 |
MsG0880045837.01.T01 | MTR_7g027175 | 29.537 | 281 | 173 | 10 | 49 | 315 | 58 | 327 | 2.26e-15 | 77.4 |
MsG0880045837.01.T01 | MTR_7g085930 | 26.071 | 280 | 171 | 10 | 49 | 301 | 49 | 319 | 3.28e-15 | 77.0 |
MsG0880045837.01.T01 | MTR_7g085990 | 25.850 | 294 | 188 | 8 | 49 | 318 | 45 | 332 | 4.59e-15 | 76.6 |
MsG0880045837.01.T01 | MTR_7g114560 | 23.839 | 323 | 173 | 14 | 30 | 308 | 24 | 317 | 2.61e-14 | 74.3 |
MsG0880045837.01.T01 | MTR_7g114490 | 22.985 | 335 | 220 | 13 | 30 | 339 | 24 | 345 | 9.94e-14 | 72.8 |
MsG0880045837.01.T01 | MTR_3g112180 | 24.038 | 312 | 209 | 10 | 52 | 346 | 54 | 354 | 2.51e-13 | 71.2 |
MsG0880045837.01.T01 | MTR_3g465980 | 26.493 | 268 | 180 | 8 | 59 | 315 | 68 | 329 | 2.91e-13 | 71.2 |
MsG0880045837.01.T01 | MTR_0502s0010 | 27.511 | 229 | 152 | 8 | 100 | 318 | 1 | 225 | 5.15e-13 | 68.6 |
MsG0880045837.01.T01 | MTR_7g014200 | 22.751 | 378 | 211 | 14 | 27 | 344 | 28 | 384 | 9.16e-13 | 69.7 |
MsG0880045837.01.T01 | MTR_6g015320 | 23.164 | 354 | 226 | 12 | 29 | 349 | 29 | 369 | 2.57e-12 | 68.2 |
MsG0880045837.01.T01 | MTR_7g084940 | 26.132 | 287 | 176 | 11 | 57 | 323 | 67 | 337 | 2.84e-12 | 68.2 |
MsG0880045837.01.T01 | MTR_7g110610 | 26.852 | 216 | 142 | 8 | 49 | 262 | 47 | 248 | 2.91e-12 | 67.8 |
MsG0880045837.01.T01 | MTR_7g056087 | 23.220 | 323 | 207 | 13 | 24 | 317 | 20 | 330 | 4.01e-12 | 67.4 |
MsG0880045837.01.T01 | MTR_3g465910 | 26.429 | 280 | 175 | 13 | 54 | 315 | 63 | 329 | 2.98e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045837.01.T02 | AT5G67150 | 36.898 | 374 | 211 | 11 | 4 | 365 | 5 | 365 | 1.59e-71 | 230 |
MsG0880045837.01.T02 | AT3G50300 | 38.859 | 368 | 204 | 10 | 1 | 361 | 1 | 354 | 1.84e-71 | 230 |
MsG0880045837.01.T02 | AT3G50270 | 36.800 | 375 | 202 | 10 | 3 | 361 | 5 | 360 | 4.78e-69 | 224 |
MsG0880045837.01.T02 | AT3G50280 | 36.412 | 379 | 214 | 12 | 1 | 369 | 1 | 362 | 1.72e-68 | 223 |
MsG0880045837.01.T02 | AT5G67160 | 38.439 | 346 | 183 | 10 | 25 | 361 | 25 | 349 | 9.55e-66 | 215 |
MsG0880045837.01.T02 | AT5G38130 | 34.324 | 370 | 223 | 9 | 1 | 363 | 21 | 377 | 3.51e-60 | 201 |
MsG0880045837.01.T02 | AT5G42830 | 34.943 | 352 | 200 | 10 | 28 | 365 | 29 | 365 | 2.38e-58 | 196 |
MsG0880045837.01.T02 | AT5G07860 | 34.930 | 355 | 191 | 10 | 28 | 362 | 30 | 364 | 4.39e-52 | 180 |
MsG0880045837.01.T02 | AT5G07850 | 32.514 | 366 | 217 | 9 | 28 | 377 | 30 | 381 | 1.81e-49 | 173 |
MsG0880045837.01.T02 | AT5G07870 | 34.699 | 366 | 191 | 13 | 28 | 364 | 30 | 376 | 1.21e-48 | 171 |
MsG0880045837.01.T02 | AT2G39980 | 32.938 | 337 | 173 | 6 | 21 | 313 | 21 | 348 | 1.49e-46 | 166 |
MsG0880045837.01.T02 | AT5G01210 | 33.129 | 326 | 178 | 8 | 21 | 313 | 19 | 337 | 2.16e-42 | 154 |
MsG0880045837.01.T02 | AT3G50290 | 36.653 | 251 | 140 | 6 | 133 | 376 | 10 | 248 | 3.42e-42 | 149 |
MsG0880045837.01.T02 | AT3G50280 | 36.327 | 245 | 138 | 8 | 130 | 369 | 1 | 232 | 1.35e-38 | 140 |
MsG0880045837.01.T02 | AT5G23940 | 30.794 | 315 | 177 | 8 | 25 | 313 | 21 | 320 | 9.95e-35 | 134 |
MsG0880045837.01.T02 | AT5G41040 | 29.904 | 311 | 163 | 13 | 56 | 339 | 82 | 364 | 5.49e-22 | 97.4 |
MsG0880045837.01.T02 | AT5G41040 | 30.405 | 296 | 156 | 12 | 56 | 329 | 66 | 333 | 6.16e-22 | 97.1 |
MsG0880045837.01.T02 | AT5G48930 | 26.398 | 322 | 184 | 15 | 57 | 356 | 54 | 344 | 7.20e-20 | 90.9 |
MsG0880045837.01.T02 | AT3G48720 | 27.393 | 303 | 182 | 14 | 42 | 327 | 40 | 321 | 1.34e-19 | 90.1 |
MsG0880045837.01.T02 | AT5G63560 | 27.018 | 285 | 162 | 12 | 59 | 326 | 61 | 316 | 1.04e-16 | 81.6 |
MsG0880045837.01.T02 | AT3G30280 | 27.645 | 293 | 172 | 15 | 58 | 341 | 61 | 322 | 4.53e-16 | 79.7 |
MsG0880045837.01.T02 | AT5G07080 | 25.538 | 325 | 185 | 12 | 59 | 353 | 70 | 367 | 4.74e-15 | 76.6 |
MsG0880045837.01.T02 | AT4G15390 | 25.461 | 271 | 172 | 9 | 59 | 325 | 64 | 308 | 9.70e-15 | 75.9 |
MsG0880045837.01.T02 | AT4G15390 | 25.461 | 271 | 172 | 9 | 59 | 325 | 64 | 308 | 9.70e-15 | 75.9 |
MsG0880045837.01.T02 | AT2G19070 | 28.000 | 325 | 181 | 18 | 54 | 353 | 53 | 349 | 1.38e-14 | 75.5 |
MsG0880045837.01.T02 | AT1G24430 | 26.282 | 312 | 183 | 11 | 46 | 345 | 44 | 320 | 2.31e-14 | 74.7 |
MsG0880045837.01.T02 | AT5G47950 | 24.333 | 300 | 183 | 11 | 55 | 346 | 57 | 320 | 9.86e-14 | 72.8 |
MsG0880045837.01.T02 | AT3G47170 | 25.000 | 300 | 172 | 10 | 59 | 328 | 70 | 346 | 4.71e-13 | 70.9 |
MsG0880045837.01.T02 | AT4G31910 | 22.635 | 296 | 196 | 9 | 42 | 312 | 42 | 329 | 9.82e-13 | 69.7 |
MsG0880045837.01.T02 | AT5G23970 | 30.093 | 216 | 105 | 11 | 45 | 244 | 38 | 223 | 1.00e-12 | 69.7 |
MsG0880045837.01.T02 | AT1G24420 | 24.915 | 293 | 176 | 12 | 70 | 349 | 76 | 337 | 2.95e-12 | 68.2 |
MsG0880045837.01.T02 | AT1G24420 | 24.915 | 293 | 176 | 12 | 70 | 349 | 76 | 337 | 2.95e-12 | 68.2 |
MsG0880045837.01.T02 | AT3G29590 | 25.382 | 327 | 200 | 11 | 29 | 330 | 28 | 335 | 5.70e-11 | 64.3 |
MsG0880045837.01.T02 | AT3G26040 | 26.182 | 275 | 164 | 11 | 53 | 318 | 53 | 297 | 6.42e-11 | 63.9 |
MsG0880045837.01.T01 | AT5G67150 | 37.534 | 365 | 210 | 11 | 4 | 354 | 5 | 365 | 9.32e-73 | 233 |
MsG0880045837.01.T01 | AT3G50300 | 39.276 | 359 | 204 | 10 | 1 | 350 | 1 | 354 | 2.99e-72 | 232 |
MsG0880045837.01.T01 | AT3G50270 | 37.875 | 367 | 198 | 10 | 3 | 350 | 5 | 360 | 3.51e-70 | 227 |
MsG0880045837.01.T01 | AT3G50280 | 37.568 | 370 | 211 | 12 | 1 | 358 | 1 | 362 | 3.75e-70 | 226 |
MsG0880045837.01.T01 | AT5G67160 | 39.640 | 333 | 186 | 9 | 25 | 350 | 25 | 349 | 8.28e-68 | 220 |
MsG0880045837.01.T01 | AT5G42830 | 35.777 | 341 | 201 | 9 | 28 | 354 | 29 | 365 | 1.38e-61 | 204 |
MsG0880045837.01.T01 | AT5G38130 | 34.903 | 361 | 222 | 9 | 1 | 352 | 21 | 377 | 2.91e-61 | 204 |
MsG0880045837.01.T01 | AT5G07860 | 35.465 | 344 | 193 | 9 | 28 | 351 | 30 | 364 | 4.43e-55 | 187 |
MsG0880045837.01.T01 | AT5G07850 | 33.239 | 355 | 218 | 8 | 28 | 366 | 30 | 381 | 1.44e-52 | 181 |
MsG0880045837.01.T01 | AT5G07870 | 35.674 | 356 | 190 | 13 | 28 | 353 | 30 | 376 | 1.06e-50 | 176 |
MsG0880045837.01.T01 | AT2G39980 | 32.344 | 337 | 164 | 6 | 21 | 302 | 21 | 348 | 7.53e-45 | 160 |
MsG0880045837.01.T01 | AT3G50290 | 37.190 | 242 | 140 | 6 | 133 | 365 | 10 | 248 | 3.19e-42 | 149 |
MsG0880045837.01.T01 | AT3G50280 | 38.136 | 236 | 135 | 8 | 130 | 358 | 1 | 232 | 2.08e-40 | 145 |
MsG0880045837.01.T01 | AT5G01210 | 30.982 | 326 | 174 | 6 | 21 | 302 | 19 | 337 | 4.44e-40 | 148 |
MsG0880045837.01.T01 | AT5G23940 | 31.922 | 307 | 173 | 8 | 25 | 302 | 21 | 320 | 7.95e-36 | 136 |
MsG0880045837.01.T01 | AT3G48720 | 28.082 | 292 | 183 | 12 | 42 | 316 | 40 | 321 | 4.03e-22 | 97.4 |
MsG0880045837.01.T01 | AT5G41040 | 30.556 | 288 | 155 | 13 | 56 | 318 | 82 | 349 | 9.32e-22 | 96.7 |
MsG0880045837.01.T01 | AT5G41040 | 30.556 | 288 | 155 | 13 | 56 | 318 | 66 | 333 | 1.14e-21 | 96.3 |
MsG0880045837.01.T01 | AT5G48930 | 28.090 | 267 | 153 | 11 | 57 | 302 | 54 | 302 | 1.36e-21 | 95.9 |
MsG0880045837.01.T01 | AT5G57840 | 26.780 | 295 | 175 | 10 | 33 | 302 | 26 | 304 | 8.93e-19 | 87.8 |
MsG0880045837.01.T01 | AT5G63560 | 28.102 | 274 | 162 | 12 | 59 | 315 | 61 | 316 | 1.36e-18 | 87.0 |
MsG0880045837.01.T01 | AT4G15390 | 25.385 | 260 | 175 | 7 | 59 | 314 | 64 | 308 | 2.83e-17 | 83.2 |
MsG0880045837.01.T01 | AT4G15390 | 25.385 | 260 | 175 | 7 | 59 | 314 | 64 | 308 | 2.83e-17 | 83.2 |
MsG0880045837.01.T01 | AT5G07080 | 26.752 | 314 | 184 | 12 | 59 | 342 | 70 | 367 | 3.28e-16 | 80.1 |
MsG0880045837.01.T01 | AT5G47950 | 25.260 | 289 | 183 | 11 | 55 | 335 | 57 | 320 | 2.99e-15 | 77.0 |
MsG0880045837.01.T01 | AT2G19070 | 28.391 | 317 | 179 | 17 | 54 | 342 | 53 | 349 | 4.02e-15 | 76.6 |
MsG0880045837.01.T01 | AT1G24430 | 27.362 | 307 | 175 | 15 | 46 | 334 | 44 | 320 | 1.24e-14 | 75.1 |
MsG0880045837.01.T01 | AT1G24420 | 26.241 | 282 | 175 | 12 | 70 | 338 | 76 | 337 | 2.97e-14 | 73.9 |
MsG0880045837.01.T01 | AT1G24420 | 26.241 | 282 | 175 | 12 | 70 | 338 | 76 | 337 | 2.97e-14 | 73.9 |
MsG0880045837.01.T01 | AT3G47170 | 24.324 | 296 | 168 | 9 | 59 | 317 | 70 | 346 | 1.83e-13 | 71.6 |
MsG0880045837.01.T01 | AT5G23970 | 26.168 | 321 | 179 | 15 | 45 | 340 | 38 | 325 | 5.99e-13 | 70.1 |
MsG0880045837.01.T01 | AT1G03390 | 22.050 | 322 | 218 | 11 | 47 | 345 | 59 | 370 | 1.63e-12 | 68.9 |
MsG0880045837.01.T01 | AT3G29590 | 25.786 | 318 | 199 | 11 | 29 | 319 | 28 | 335 | 7.40e-12 | 67.0 |
MsG0880045837.01.T01 | AT1G32910 | 23.929 | 280 | 172 | 13 | 48 | 304 | 52 | 313 | 8.27e-11 | 63.5 |
Find 83 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGTTAGCAGAGAATTATTT+TGG | 0.211649 | 8:-65150210 | MsG0880045837.01.T02:CDS |
CTTCACAAAGGAACAAATTA+TGG | 0.255868 | 8:-65150430 | MsG0880045837.01.T02:CDS |
GAAAGTAGGGGAACTAATTA+AGG | 0.304309 | 8:-65150154 | MsG0880045837.01.T02:CDS |
CTAGATCCCATGGAGTTAAA+TGG | 0.311423 | 8:+65151036 | None:intergenic |
TTTGGCAATTCGTCAATTCT+TGG | 0.323013 | 8:-65150605 | MsG0880045837.01.T02:CDS |
CATTTAACTCCATGGGATCT+AGG | 0.335954 | 8:-65151035 | MsG0880045837.01.T02:CDS |
CACCACCATGATTTGTTGCT+TGG | 0.342264 | 8:+65151081 | None:intergenic |
TGGTTGAAAACACCGATTAT+AGG | 0.365268 | 8:-65150042 | MsG0880045837.01.T02:CDS |
ATTCTTGTCCTACAATCTAT+TGG | 0.366176 | 8:+65150240 | None:intergenic |
AAAGTGTTTGTTTAAGATGT+TGG | 0.372506 | 8:+65150949 | None:intergenic |
TTTGTTTAAGATGTTGGATT+TGG | 0.377190 | 8:+65150955 | None:intergenic |
GGAAACGCGATCGGAGTGTA+TGG | 0.389792 | 8:-65150189 | MsG0880045837.01.T02:CDS |
TTGTAGATGCCAAGTCGTTT+TGG | 0.393020 | 8:-65150623 | MsG0880045837.01.T02:CDS |
ATGGGATGGTTAATGTTGTT+TGG | 0.396059 | 8:+65150522 | None:intergenic |
TTGGCAATTCGTCAATTCTT+GGG | 0.404998 | 8:-65150604 | MsG0880045837.01.T02:CDS |
CTTCTCATGATGAGATTCCT+TGG | 0.413383 | 8:+65150086 | None:intergenic |
TGAGGTTACCAATAGATTGT+AGG | 0.427359 | 8:-65150248 | MsG0880045837.01.T02:CDS |
TTAATCGACGGTATCTTCAT+TGG | 0.437351 | 8:-65150666 | MsG0880045837.01.T02:CDS |
CTTTGTGAAAGGAAACTGTA+TGG | 0.439313 | 8:+65150503 | None:intergenic |
TATGGAAAAGTAGGCCTTGT+TGG | 0.447744 | 8:+65150991 | None:intergenic |
GGAAAGAAACGTTCGAAAGA+AGG | 0.448085 | 8:+65150543 | None:intergenic |
AAAAGTAGGCCTTGTTGGAT+TGG | 0.451759 | 8:+65150996 | None:intergenic |
CTAATTAAGGAAGGTGGGAT+TGG | 0.453927 | 8:-65150141 | MsG0880045837.01.T02:CDS |
GAGCTGTAATCATGAAAGTA+GGG | 0.459050 | 8:-65150167 | MsG0880045837.01.T02:CDS |
GTACCTGGCTCTCCTATAAT+CGG | 0.473631 | 8:+65150030 | None:intergenic |
AAATTATCCATTTAACTCCA+TGG | 0.476667 | 8:-65151043 | MsG0880045837.01.T02:CDS |
TTTAAGATGTTGGATTTGGT+TGG | 0.482434 | 8:+65150959 | None:intergenic |
AAATAATTCTCTGCTAACTC+TGG | 0.484550 | 8:+65150213 | None:intergenic |
ACCATCGTTGTTGCAAATGA+TGG | 0.485461 | 8:+65150845 | None:intergenic |
GAGGAACATAGTCGGGTTGA+AGG | 0.489431 | 8:+65150775 | None:intergenic |
GGAGCTGTAATCATGAAAGT+AGG | 0.489443 | 8:-65150168 | MsG0880045837.01.T02:CDS |
TGAAATAACGAGTGAACAAT+GGG | 0.493001 | 8:+65150753 | None:intergenic |
ACAATCCAAGCAACAAATCA+TGG | 0.496225 | 8:-65151086 | MsG0880045837.01.T02:CDS |
AATTTCTTTCCACCCCTCGT+TGG | 0.504836 | 8:-65150915 | MsG0880045837.01.T02:CDS |
GACGAATTGCCAAAACGACT+TGG | 0.504895 | 8:+65150614 | None:intergenic |
TGGGATTGGTAAGGCTGCTA+TGG | 0.505833 | 8:-65150127 | MsG0880045837.01.T02:CDS |
CACTCGTTATTTCATCTCAA+CGG | 0.513834 | 8:-65150744 | MsG0880045837.01.T02:CDS |
GCAGAAATTAGTAGTAGTAA+TGG | 0.516160 | 8:-65150387 | MsG0880045837.01.T02:CDS |
AATTATCCATTTAACTCCAT+GGG | 0.520119 | 8:-65151042 | MsG0880045837.01.T02:CDS |
TAATTTGTTCCTTTGTGAAG+TGG | 0.523513 | 8:+65150433 | None:intergenic |
CTTTGTGATTCCTTTGTGAA+AGG | 0.524014 | 8:+65150492 | None:intergenic |
TTTAGTAATCCTAGATCCCA+TGG | 0.525579 | 8:+65151026 | None:intergenic |
GAAAGAAACGTTCGAAAGAA+GGG | 0.526458 | 8:+65150544 | None:intergenic |
ATGAAATAACGAGTGAACAA+TGG | 0.527630 | 8:+65150752 | None:intergenic |
GGGGAACTAATTAAGGAAGG+TGG | 0.528509 | 8:-65150147 | MsG0880045837.01.T02:CDS |
CATACAGTTTCCTTTCACAA+AGG | 0.529434 | 8:-65150502 | MsG0880045837.01.T02:CDS |
GGTAATAGTAGTAGCGGTGG+TGG | 0.534114 | 8:-65150366 | MsG0880045837.01.T02:CDS |
CTTGATTCACTCACTATGAC+AGG | 0.535303 | 8:-65151131 | None:intergenic |
ACAATGGGAGGAACATAGTC+GGG | 0.543416 | 8:+65150768 | None:intergenic |
GGGAACTAATTAAGGAAGGT+GGG | 0.549338 | 8:-65150146 | MsG0880045837.01.T02:CDS |
TAAGGAAGGTGGGATTGGTA+AGG | 0.553648 | 8:-65150136 | MsG0880045837.01.T02:CDS |
AATGAACAAGATGATTTCCA+AGG | 0.555083 | 8:-65150103 | MsG0880045837.01.T02:CDS |
ACACCGATTATAGGAGAGCC+AGG | 0.556686 | 8:-65150033 | MsG0880045837.01.T02:CDS |
TAATGAATAACTATGAGTCT+TGG | 0.557241 | 8:-65150062 | MsG0880045837.01.T02:CDS |
TGGAAAGAAATTGAGAGTAG+AGG | 0.582108 | 8:+65150926 | None:intergenic |
AACAATGGGAGGAACATAGT+CGG | 0.586336 | 8:+65150767 | None:intergenic |
CAAGGAATCTCATCATGAGA+AGG | 0.597159 | 8:-65150085 | MsG0880045837.01.T02:CDS |
ATAGTACTTCTTAACGTACC+TGG | 0.602786 | 8:+65150015 | None:intergenic |
GTAGGGGAACTAATTAAGGA+AGG | 0.602907 | 8:-65150150 | MsG0880045837.01.T02:CDS |
AATGGTAATAGTAGTAGCGG+TGG | 0.604299 | 8:-65150369 | MsG0880045837.01.T02:CDS |
TCTTGGGTTGAAATCTCACA+TGG | 0.607923 | 8:-65150588 | MsG0880045837.01.T02:CDS |
AGTAATGGTAATAGTAGTAG+CGG | 0.609696 | 8:-65150372 | MsG0880045837.01.T02:CDS |
GTTACTTGAACTGCAAGCAA+TGG | 0.612413 | 8:+65150693 | None:intergenic |
TTTGTGAAAGGAAACTGTAT+GGG | 0.618288 | 8:+65150504 | None:intergenic |
TCCATCATTTGCAACAACGA+TGG | 0.625768 | 8:-65150846 | MsG0880045837.01.T02:CDS |
ACAAGACGACCAACGAGGGG+TGG | 0.627404 | 8:+65150906 | None:intergenic |
TGAAAGGAAACTGTATGGGA+TGG | 0.645793 | 8:+65150508 | None:intergenic |
GGGTTGAAGGATGTCAGCAA+TGG | 0.647433 | 8:+65150788 | None:intergenic |
TCGAATCTTCCACTTCACAA+AGG | 0.657994 | 8:-65150442 | MsG0880045837.01.T02:CDS |
AAGTGGAAGATTCGATGAGG+AGG | 0.660680 | 8:+65150450 | None:intergenic |
TATTACAAGACGACCAACGA+GGG | 0.663552 | 8:+65150902 | None:intergenic |
CAAGTAACAGAGTTAATCGA+CGG | 0.664234 | 8:-65150678 | MsG0880045837.01.T02:CDS |
AGCTGTAATCATGAAAGTAG+GGG | 0.667247 | 8:-65150166 | MsG0880045837.01.T02:CDS |
ATGACGCATTGTTACCGTCG+TGG | 0.675735 | 8:+65150871 | None:intergenic |
AAAATAGAACCAATCCAACA+AGG | 0.688880 | 8:-65151005 | MsG0880045837.01.T02:CDS |
GTGAAGTGGAAGATTCGATG+AGG | 0.689197 | 8:+65150447 | None:intergenic |
AATAACGAGTGAACAATGGG+AGG | 0.693864 | 8:+65150756 | None:intergenic |
ATTACAAGACGACCAACGAG+GGG | 0.716523 | 8:+65150903 | None:intergenic |
ACTTGGCATCTACAACCACA+TGG | 0.717484 | 8:+65150631 | None:intergenic |
ATCCAAGCAACAAATCATGG+TGG | 0.732198 | 8:-65151083 | MsG0880045837.01.T02:CDS |
GTAATATCTCAACACCACGA+CGG | 0.741797 | 8:-65150885 | MsG0880045837.01.T02:CDS |
TGGTATTGAAATGAACCATG+TGG | 0.766085 | 8:-65150646 | MsG0880045837.01.T02:CDS |
ATATTACAAGACGACCAACG+AGG | 0.771437 | 8:+65150901 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAATTATCCATTTAACTCCA+TGG | - | Chr8:65150078-65150097 | MsG0880045837.01.T02:CDS | 25.0% |
! | AATTATCCATTTAACTCCAT+GGG | - | Chr8:65150079-65150098 | MsG0880045837.01.T02:CDS | 25.0% |
! | TAATGAATAACTATGAGTCT+TGG | - | Chr8:65151059-65151078 | MsG0880045837.01.T02:CDS | 25.0% |
!! | AAAGTGTTTGTTTAAGATGT+TGG | + | Chr8:65150175-65150194 | None:intergenic | 25.0% |
!! | TTTGTTTAAGATGTTGGATT+TGG | + | Chr8:65150169-65150188 | None:intergenic | 25.0% |
!!! | TTTTAGGTTTATGGAAAAGT+AGG | + | Chr8:65150142-65150161 | None:intergenic | 25.0% |
AAAATAGAACCAATCCAACA+AGG | - | Chr8:65150116-65150135 | MsG0880045837.01.T02:CDS | 30.0% | |
AAATAATTCTCTGCTAACTC+TGG | + | Chr8:65150911-65150930 | None:intergenic | 30.0% | |
AATGAACAAGATGATTTCCA+AGG | - | Chr8:65151018-65151037 | MsG0880045837.01.T02:CDS | 30.0% | |
AGTAATGGTAATAGTAGTAG+CGG | - | Chr8:65150749-65150768 | MsG0880045837.01.T02:CDS | 30.0% | |
ATGAAATAACGAGTGAACAA+TGG | + | Chr8:65150372-65150391 | None:intergenic | 30.0% | |
ATTCTTGTCCTACAATCTAT+TGG | + | Chr8:65150884-65150903 | None:intergenic | 30.0% | |
CTTCACAAAGGAACAAATTA+TGG | - | Chr8:65150691-65150710 | MsG0880045837.01.T02:CDS | 30.0% | |
GCAGAAATTAGTAGTAGTAA+TGG | - | Chr8:65150734-65150753 | MsG0880045837.01.T02:CDS | 30.0% | |
TGAAATAACGAGTGAACAAT+GGG | + | Chr8:65150371-65150390 | None:intergenic | 30.0% | |
TTTGTGAAAGGAAACTGTAT+GGG | + | Chr8:65150620-65150639 | None:intergenic | 30.0% | |
! | GAGTTAGCAGAGAATTATTT+TGG | - | Chr8:65150911-65150930 | MsG0880045837.01.T02:CDS | 30.0% |
! | TTTAAGATGTTGGATTTGGT+TGG | + | Chr8:65150165-65150184 | None:intergenic | 30.0% |
!! | TAATTTGTTCCTTTGTGAAG+TGG | + | Chr8:65150691-65150710 | None:intergenic | 30.0% |
!!! | AATTATTTTGGAAACGCGAT+CGG | - | Chr8:65150923-65150942 | MsG0880045837.01.T02:CDS | 30.0% |
!!! | TTTGGTTGGTTTTAGGTTTA+TGG | + | Chr8:65150151-65150170 | None:intergenic | 30.0% |
AACGGAGTTAAAAACTACGA+AGG | - | Chr8:65150395-65150414 | MsG0880045837.01.T02:CDS | 35.0% | |
ACAATCCAAGCAACAAATCA+TGG | - | Chr8:65150035-65150054 | MsG0880045837.01.T02:CDS | 35.0% | |
AGCTGTAATCATGAAAGTAG+GGG | - | Chr8:65150955-65150974 | MsG0880045837.01.T02:CDS | 35.0% | |
ATAGTACTTCTTAACGTACC+TGG | + | Chr8:65151109-65151128 | None:intergenic | 35.0% | |
ATGGGATGGTTAATGTTGTT+TGG | + | Chr8:65150602-65150621 | None:intergenic | 35.0% | |
CAAGTAACAGAGTTAATCGA+CGG | - | Chr8:65150443-65150462 | MsG0880045837.01.T02:CDS | 35.0% | |
CATACAGTTTCCTTTCACAA+AGG | - | Chr8:65150619-65150638 | MsG0880045837.01.T02:CDS | 35.0% | |
CTTTGTGAAAGGAAACTGTA+TGG | + | Chr8:65150621-65150640 | None:intergenic | 35.0% | |
CTTTGTGATTCCTTTGTGAA+AGG | + | Chr8:65150632-65150651 | None:intergenic | 35.0% | |
GAAAGAAACGTTCGAAAGAA+GGG | + | Chr8:65150580-65150599 | None:intergenic | 35.0% | |
GAAAGTAGGGGAACTAATTA+AGG | - | Chr8:65150967-65150986 | MsG0880045837.01.T02:CDS | 35.0% | |
GAGCTGTAATCATGAAAGTA+GGG | - | Chr8:65150954-65150973 | MsG0880045837.01.T02:CDS | 35.0% | |
TGAGGTTACCAATAGATTGT+AGG | - | Chr8:65150873-65150892 | MsG0880045837.01.T02:CDS | 35.0% | |
TGGAAAGAAATTGAGAGTAG+AGG | + | Chr8:65150198-65150217 | None:intergenic | 35.0% | |
TTAATCGACGGTATCTTCAT+TGG | - | Chr8:65150455-65150474 | MsG0880045837.01.T02:CDS | 35.0% | |
TTGGCAATTCGTCAATTCTT+GGG | - | Chr8:65150517-65150536 | MsG0880045837.01.T02:CDS | 35.0% | |
TTTAGTAATCCTAGATCCCA+TGG | + | Chr8:65150098-65150117 | None:intergenic | 35.0% | |
TTTGGCAATTCGTCAATTCT+TGG | - | Chr8:65150516-65150535 | MsG0880045837.01.T02:CDS | 35.0% | |
! | CACTCGTTATTTCATCTCAA+CGG | - | Chr8:65150377-65150396 | MsG0880045837.01.T02:CDS | 35.0% |
! | CAGAAGAAAAGACTGTTTTG+AGG | - | Chr8:65150855-65150874 | MsG0880045837.01.T02:CDS | 35.0% |
! | CTCAAAACAGTCTTTTCTTC+TGG | + | Chr8:65150857-65150876 | None:intergenic | 35.0% |
! | TCGAAAGAAGGGATTTTTGT+TGG | + | Chr8:65150569-65150588 | None:intergenic | 35.0% |
! | TGGTATTGAAATGAACCATG+TGG | - | Chr8:65150475-65150494 | MsG0880045837.01.T02:CDS | 35.0% |
! | TGGTTGAAAACACCGATTAT+AGG | - | Chr8:65151079-65151098 | MsG0880045837.01.T02:CDS | 35.0% |
!! | AAGCGCTTTTAAGTCACTTT+TGG | - | Chr8:65150801-65150820 | MsG0880045837.01.T02:CDS | 35.0% |
!! | AATGGTAGTGTTTTCTGCTA+TGG | + | Chr8:65150318-65150337 | None:intergenic | 35.0% |
!!! | TGTTGGATTTGGTTGGTTTT+AGG | + | Chr8:65150158-65150177 | None:intergenic | 35.0% |
AACAATGGGAGGAACATAGT+CGG | + | Chr8:65150357-65150376 | None:intergenic | 40.0% | |
AATAACGAGTGAACAATGGG+AGG | + | Chr8:65150368-65150387 | None:intergenic | 40.0% | |
AATGGTAATAGTAGTAGCGG+TGG | - | Chr8:65150752-65150771 | MsG0880045837.01.T02:CDS | 40.0% | |
ACCATCGTTGTTGCAAATGA+TGG | + | Chr8:65150279-65150298 | None:intergenic | 40.0% | |
ATATTACAAGACGACCAACG+AGG | + | Chr8:65150223-65150242 | None:intergenic | 40.0% | |
ATCCAAGCAACAAATCATGG+TGG | - | Chr8:65150038-65150057 | MsG0880045837.01.T02:CDS | 40.0% | |
CAAGGAATCTCATCATGAGA+AGG | - | Chr8:65151036-65151055 | MsG0880045837.01.T02:CDS | 40.0% | |
CATTTAACTCCATGGGATCT+AGG | - | Chr8:65150086-65150105 | MsG0880045837.01.T02:CDS | 40.0% | |
CTAATTAAGGAAGGTGGGAT+TGG | - | Chr8:65150980-65150999 | MsG0880045837.01.T02:CDS | 40.0% | |
CTAGATCCCATGGAGTTAAA+TGG | + | Chr8:65150088-65150107 | None:intergenic | 40.0% | |
CTTCTCATGATGAGATTCCT+TGG | + | Chr8:65151038-65151057 | None:intergenic | 40.0% | |
GGAAAGAAACGTTCGAAAGA+AGG | + | Chr8:65150581-65150600 | None:intergenic | 40.0% | |
GGAGCTGTAATCATGAAAGT+AGG | - | Chr8:65150953-65150972 | MsG0880045837.01.T02:CDS | 40.0% | |
GGGAACTAATTAAGGAAGGT+GGG | - | Chr8:65150975-65150994 | MsG0880045837.01.T02:CDS | 40.0% | |
GTAATATCTCAACACCACGA+CGG | - | Chr8:65150236-65150255 | MsG0880045837.01.T02:CDS | 40.0% | |
GTAGGGGAACTAATTAAGGA+AGG | - | Chr8:65150971-65150990 | MsG0880045837.01.T02:CDS | 40.0% | |
GTTACTTGAACTGCAAGCAA+TGG | + | Chr8:65150431-65150450 | None:intergenic | 40.0% | |
TATTACAAGACGACCAACGA+GGG | + | Chr8:65150222-65150241 | None:intergenic | 40.0% | |
TCCATCATTTGCAACAACGA+TGG | - | Chr8:65150275-65150294 | MsG0880045837.01.T02:CDS | 40.0% | |
TCGAATCTTCCACTTCACAA+AGG | - | Chr8:65150679-65150698 | MsG0880045837.01.T02:CDS | 40.0% | |
TGAAAGGAAACTGTATGGGA+TGG | + | Chr8:65150616-65150635 | None:intergenic | 40.0% | |
! | TATGGAAAAGTAGGCCTTGT+TGG | + | Chr8:65150133-65150152 | None:intergenic | 40.0% |
! | TTGTAGATGCCAAGTCGTTT+TGG | - | Chr8:65150498-65150517 | MsG0880045837.01.T02:CDS | 40.0% |
!! | AAAAGTAGGCCTTGTTGGAT+TGG | + | Chr8:65150128-65150147 | None:intergenic | 40.0% |
!! | TCTTGGGTTGAAATCTCACA+TGG | - | Chr8:65150533-65150552 | MsG0880045837.01.T02:CDS | 40.0% |
AAGTGGAAGATTCGATGAGG+AGG | + | Chr8:65150674-65150693 | None:intergenic | 45.0% | |
AATTTCTTTCCACCCCTCGT+TGG | - | Chr8:65150206-65150225 | MsG0880045837.01.T02:CDS | 45.0% | |
ACAATGGGAGGAACATAGTC+GGG | + | Chr8:65150356-65150375 | None:intergenic | 45.0% | |
ACTTGGCATCTACAACCACA+TGG | + | Chr8:65150493-65150512 | None:intergenic | 45.0% | |
ATTACAAGACGACCAACGAG+GGG | + | Chr8:65150221-65150240 | None:intergenic | 45.0% | |
GACGAATTGCCAAAACGACT+TGG | + | Chr8:65150510-65150529 | None:intergenic | 45.0% | |
GGGGAACTAATTAAGGAAGG+TGG | - | Chr8:65150974-65150993 | MsG0880045837.01.T02:CDS | 45.0% | |
GTGAAGTGGAAGATTCGATG+AGG | + | Chr8:65150677-65150696 | None:intergenic | 45.0% | |
! | GTACCTGGCTCTCCTATAAT+CGG | + | Chr8:65151094-65151113 | None:intergenic | 45.0% |
! | TAAGGAAGGTGGGATTGGTA+AGG | - | Chr8:65150985-65151004 | MsG0880045837.01.T02:CDS | 45.0% |
! | TAGTGTTTTCTGCTATGGCG+TGG | + | Chr8:65150313-65150332 | None:intergenic | 45.0% |
!! | CACCACCATGATTTGTTGCT+TGG | + | Chr8:65150043-65150062 | None:intergenic | 45.0% |
ATGACGCATTGTTACCGTCG+TGG | + | Chr8:65150253-65150272 | None:intergenic | 50.0% | |
GGGTTGAAGGATGTCAGCAA+TGG | + | Chr8:65150336-65150355 | None:intergenic | 50.0% | |
GGTAATAGTAGTAGCGGTGG+TGG | - | Chr8:65150755-65150774 | MsG0880045837.01.T02:CDS | 50.0% | |
! | ACACCGATTATAGGAGAGCC+AGG | - | Chr8:65151088-65151107 | MsG0880045837.01.T02:CDS | 50.0% |
! | TGGGATTGGTAAGGCTGCTA+TGG | - | Chr8:65150994-65151013 | MsG0880045837.01.T02:CDS | 50.0% |
!! | GAGGAACATAGTCGGGTTGA+AGG | + | Chr8:65150349-65150368 | None:intergenic | 50.0% |
GGAAACGCGATCGGAGTGTA+TGG | - | Chr8:65150932-65150951 | MsG0880045837.01.T02:CDS | 55.0% | |
ACAAGACGACCAACGAGGGG+TGG | + | Chr8:65150218-65150237 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 65150005 | 65151138 | 65150005 | ID=MsG0880045837.01;Name=MsG0880045837.01 |
Chr8 | mRNA | 65150005 | 65151138 | 65150005 | ID=MsG0880045837.01.T01;Parent=MsG0880045837.01;Name=MsG0880045837.01.T01;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|0|0|2|0|366 |
Chr8 | exon | 65150005 | 65150354 | 65150005 | ID=MsG0880045837.01.T01:exon:13589;Parent=MsG0880045837.01.T01 |
Chr8 | exon | 65150388 | 65151138 | 65150388 | ID=MsG0880045837.01.T01:exon:13588;Parent=MsG0880045837.01.T01 |
Chr8 | CDS | 65150388 | 65151138 | 65150388 | ID=MsG0880045837.01.T01:cds;Parent=MsG0880045837.01.T01 |
Chr8 | CDS | 65150005 | 65150354 | 65150005 | ID=MsG0880045837.01.T01:cds;Parent=MsG0880045837.01.T01 |
Chr8 | mRNA | 65150005 | 65151138 | 65150005 | ID=MsG0880045837.01.T02;Parent=MsG0880045837.01;Name=MsG0880045837.01.T02;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|377 |
Chr8 | exon | 65150005 | 65151138 | 65150005 | ID=MsG0880045837.01.T02:exon:13590;Parent=MsG0880045837.01.T02 |
Chr8 | CDS | 65150005 | 65151138 | 65150005 | ID=MsG0880045837.01.T02:cds;Parent=MsG0880045837.01.T02 |
Gene Sequence |
Protein sequence |