Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152870 | XP_013466657.1 | 97.264 | 658 | 18 | 0 | 1 | 658 | 1 | 658 | 0.0 | 1323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152870 | sp|Q9ZT92|AK10B_ARATH | 30.541 | 573 | 327 | 14 | 46 | 597 | 47 | 569 | 7.21e-64 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152870 | A0A072VGX6 | 97.264 | 658 | 18 | 0 | 1 | 658 | 1 | 658 | 0.0 | 1323 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0152870 | 0.868068 | 8.591219e-66 | -8.615850e-47 |
| Msa0031820 | Msa0152870 | 0.806429 | 8.261759e-50 | -8.615850e-47 |
| Msa0032020 | Msa0152870 | 0.807720 | 4.403760e-50 | -8.615850e-47 |
| Msa0037410 | Msa0152870 | 0.805012 | 1.639136e-49 | -8.615850e-47 |
| Msa0042280 | Msa0152870 | 0.805064 | 1.598874e-49 | -8.615850e-47 |
| Msa0046830 | Msa0152870 | 0.839075 | 1.967708e-57 | -8.615850e-47 |
| Msa0052610 | Msa0152870 | 0.830362 | 3.064248e-55 | -8.615850e-47 |
| Msa0052870 | Msa0152870 | 0.807546 | 4.793836e-50 | -8.615850e-47 |
| Msa0057610 | Msa0152870 | 0.830709 | 2.521008e-55 | -8.615850e-47 |
| Msa0093850 | Msa0152870 | 0.873713 | 1.187940e-67 | -8.615850e-47 |
| Msa0098470 | Msa0152870 | 0.859895 | 3.013357e-63 | -8.615850e-47 |
| Msa0099230 | Msa0152870 | 0.806913 | 6.530520e-50 | -8.615850e-47 |
| Msa0106320 | Msa0152870 | 0.909974 | 3.143183e-82 | -8.615850e-47 |
| Msa0106620 | Msa0152870 | 0.810574 | 1.077324e-50 | -8.615850e-47 |
| Msa0118710 | Msa0152870 | 0.834948 | 2.230511e-56 | -8.615850e-47 |
| Msa0138360 | Msa0152870 | 0.829467 | 5.064703e-55 | -8.615850e-47 |
| Msa0142410 | Msa0152870 | 0.800812 | 1.209172e-48 | -8.615850e-47 |
| Msa0147980 | Msa0152870 | 0.812796 | 3.540822e-51 | -8.615850e-47 |
| Msa0148010 | Msa0152870 | 0.807603 | 4.662856e-50 | -8.615850e-47 |
| Msa0152870 | Msa0167480 | 0.806355 | 8.565211e-50 | -8.615850e-47 |
| Msa0152870 | Msa0171850 | 0.809021 | 2.324611e-50 | -8.615850e-47 |
| Msa0152870 | Msa0178120 | 0.821820 | 3.295468e-53 | -8.615850e-47 |
| Msa0152870 | Msa0179030 | 0.814024 | 1.901236e-51 | -8.615850e-47 |
| Msa0152870 | Msa0188690 | 0.805440 | 1.333366e-49 | -8.615850e-47 |
| Msa0152870 | Msa0192480 | 0.828590 | 8.259465e-55 | -8.615850e-47 |
| Msa0152870 | Msa0209140 | 0.836565 | 8.687464e-57 | -8.615850e-47 |
| Msa0152870 | Msa0218830 | 0.812419 | 4.280226e-51 | -8.615850e-47 |
| Msa0152870 | Msa0221480 | 0.832108 | 1.140823e-55 | -8.615850e-47 |
| Msa0152870 | Msa0223230 | 0.828904 | 6.935911e-55 | -8.615850e-47 |
| Msa0152870 | Msa0226460 | 0.801225 | 9.956509e-49 | -8.615850e-47 |
| Msa0152870 | Msa0229920 | 0.801897 | 7.247182e-49 | -8.615850e-47 |
| Msa0152870 | Msa0238660 | 0.800646 | 1.307000e-48 | -8.615850e-47 |
| Msa0152870 | Msa0241830 | 0.839222 | 1.803393e-57 | -8.615850e-47 |
| Msa0152870 | Msa0261170 | 0.829381 | 5.313233e-55 | -8.615850e-47 |
| Msa0152870 | Msa0262480 | 0.817724 | 2.842923e-52 | -8.615850e-47 |
| Msa0152870 | Msa0270210 | 0.815150 | 1.071556e-51 | -8.615850e-47 |
| Msa0152870 | Msa0279850 | 0.829876 | 4.026786e-55 | -8.615850e-47 |
| Msa0152870 | Msa0296250 | 0.840894 | 6.604223e-58 | -8.615850e-47 |
| Msa0152870 | Msa0300350 | 0.812178 | 4.830392e-51 | -8.615850e-47 |
| Msa0152870 | Msa0305780 | 0.848029 | 7.951249e-60 | -8.615850e-47 |
| Msa0152870 | Msa0307270 | 0.810100 | 1.363072e-50 | -8.615850e-47 |
| Msa0152870 | Msa0307570 | 0.807759 | 4.320486e-50 | -8.615850e-47 |
| Msa0152870 | Msa0307850 | 0.801657 | 8.119870e-49 | -8.615850e-47 |
| Msa0152870 | Msa0322900 | 0.833944 | 3.985258e-56 | -8.615850e-47 |
| Msa0152870 | Msa0327300 | 0.819681 | 1.022176e-52 | -8.615850e-47 |
| Msa0152870 | Msa0332640 | 0.811404 | 7.121392e-51 | -8.615850e-47 |
| Msa0152870 | Msa0341690 | 0.860989 | 1.405910e-63 | -8.615850e-47 |
| Msa0152870 | Msa0388990 | 0.831408 | 1.698303e-55 | -8.615850e-47 |
| Msa0152870 | Msa0423750 | 0.825670 | 4.130746e-54 | -8.615850e-47 |
| Msa0152870 | Msa0424160 | 0.804925 | 1.709767e-49 | -8.615850e-47 |
| Msa0152870 | Msa0435370 | 0.881000 | 3.450862e-70 | -8.615850e-47 |
| Msa0152870 | Msa0435420 | 0.873962 | 9.786019e-68 | -8.615850e-47 |
| Msa0152870 | Msa0435570 | 0.860922 | 1.473149e-63 | -8.615850e-47 |
| Msa0152870 | Msa0443390 | 0.813021 | 3.160149e-51 | -8.615850e-47 |
| Msa0152870 | Msa0479200 | 0.818608 | 1.793699e-52 | -8.615850e-47 |
| Msa0152870 | Msa0485240 | 0.816272 | 6.024690e-52 | -8.615850e-47 |
| Msa0152870 | Msa0515800 | 0.808868 | 2.507097e-50 | -8.615850e-47 |
| Msa0152870 | Msa0518030 | 0.871171 | 8.370933e-67 | -8.615850e-47 |
| Msa0152870 | Msa0527020 | 0.805506 | 1.291862e-49 | -8.615850e-47 |
| Msa0152870 | Msa0527190 | 0.810326 | 1.218758e-50 | -8.615850e-47 |
| Msa0152870 | Msa0534750 | 0.815015 | 1.147975e-51 | -8.615850e-47 |
| Msa0152870 | Msa0547990 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
| Msa0152870 | Msa0556010 | 0.839960 | 1.159309e-57 | -8.615850e-47 |
| Msa0152870 | Msa0581690 | 0.836351 | 9.845734e-57 | -8.615850e-47 |
| Msa0152870 | Msa0590640 | 0.809848 | 1.544400e-50 | -8.615850e-47 |
| Msa0152870 | Msa0593700 | 0.802637 | 5.104856e-49 | -8.615850e-47 |
| Msa0152870 | Msa0619420 | 0.801435 | 9.016586e-49 | -8.615850e-47 |
| Msa0152870 | Msa0630940 | 0.807812 | 4.210073e-50 | -8.615850e-47 |
| Msa0152870 | Msa0644030 | 0.806381 | 8.455961e-50 | -8.615850e-47 |
| Msa0152870 | Msa0652000 | 0.800847 | 1.189432e-48 | -8.615850e-47 |
| Msa0152870 | Msa0666230 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
| Msa0152870 | Msa0669180 | 0.814769 | 1.301345e-51 | -8.615850e-47 |
| Msa0152870 | Msa0669520 | 0.802688 | 4.981152e-49 | -8.615850e-47 |
| Msa0152870 | Msa0687870 | 0.800743 | 1.249185e-48 | -8.615850e-47 |
| Msa0152870 | Msa0692880 | 0.830608 | 2.668385e-55 | -8.615850e-47 |
| Msa0152870 | Msa0693330 | 0.819300 | 1.248422e-52 | -8.615850e-47 |
| Msa0152870 | Msa0706760 | 0.801593 | 8.369909e-49 | -8.615850e-47 |
| Msa0152870 | Msa0716410 | 0.807114 | 5.919847e-50 | -8.615850e-47 |
| Msa0152870 | Msa0726090 | 0.808957 | 2.398602e-50 | -8.615850e-47 |
| Msa0152870 | Msa0738100 | 0.810257 | 1.261421e-50 | -8.615850e-47 |
| Msa0152870 | Msa0785130 | 0.830097 | 3.558116e-55 | -8.615850e-47 |
| Msa0152870 | Msa0799000 | 0.829952 | 3.859603e-55 | -8.615850e-47 |
| Msa0152870 | Msa0804250 | 0.823141 | 1.625195e-53 | -8.615850e-47 |
| Msa0152870 | Msa0808800 | 0.813357 | 2.666258e-51 | -8.615850e-47 |
| Msa0152870 | Msa0810930 | 0.803590 | 3.241661e-49 | -8.615850e-47 |
| Msa0152870 | Msa0817540 | 0.821155 | 4.693400e-53 | -8.615850e-47 |
| Msa0152870 | Msa0819540 | 0.823113 | 1.649569e-53 | -8.615850e-47 |
| Msa0152870 | Msa0832120 | 0.808621 | 2.830221e-50 | -8.615850e-47 |
| Msa0152870 | Msa0846240 | 0.801842 | 7.441089e-49 | -8.615850e-47 |
| Msa0152870 | Msa1076560 | 0.823071 | 1.686809e-53 | -8.615850e-47 |
| Msa0152870 | Msa1079230 | 0.828568 | 8.363956e-55 | -8.615850e-47 |
| Msa0152870 | Msa1127590 | 0.816459 | 5.469495e-52 | -8.615850e-47 |
| Msa0152870 | Msa1135890 | 0.819797 | 9.617383e-53 | -8.615850e-47 |
| Msa0152870 | Msa1143650 | 0.805937 | 1.048971e-49 | -8.615850e-47 |
| Msa0152870 | Msa1145240 | 0.830414 | 2.976465e-55 | -8.615850e-47 |
| Msa0152870 | Msa1169040 | 0.814401 | 1.569645e-51 | -8.615850e-47 |
| Msa0152870 | Msa1174530 | 0.802258 | 6.110846e-49 | -8.615850e-47 |
| Msa0152870 | Msa1202580 | 0.802611 | 5.167507e-49 | -8.615850e-47 |
| Msa0152870 | Msa1206090 | 0.811044 | 8.525062e-51 | -8.615850e-47 |
| Msa0152870 | Msa1206230 | 0.838205 | 3.301412e-57 | -8.615850e-47 |
| Msa0152870 | Msa1234550 | 0.802855 | 4.602654e-49 | -8.615850e-47 |
| Msa0152870 | Msa1235250 | 0.809153 | 2.177842e-50 | -8.615850e-47 |
| Msa0152870 | Msa1237140 | 0.801182 | 1.015852e-48 | -8.615850e-47 |
| Msa0152870 | Msa1241190 | 0.800724 | 1.260322e-48 | -8.615850e-47 |
| Msa0152870 | Msa1253550 | 0.813279 | 2.773642e-51 | -8.615850e-47 |
| Msa0152870 | Msa1256850 | 0.823001 | 1.752016e-53 | -8.615850e-47 |
| Msa0152870 | Msa1262890 | 0.823485 | 1.350787e-53 | -8.615850e-47 |
| Msa0152870 | Msa1277080 | 0.813895 | 2.030289e-51 | -8.615850e-47 |
| Msa0152870 | Msa1278740 | 0.828670 | 7.899735e-55 | -8.615850e-47 |
| Msa0152870 | Msa1297970 | 0.847520 | 1.097704e-59 | -8.615850e-47 |
| Msa0152870 | Msa1317950 | 0.820421 | 6.920576e-53 | -8.615850e-47 |
| Msa0152870 | Msa1317960 | 0.830864 | 2.309250e-55 | -8.615850e-47 |
| Msa0152870 | Msa1319330 | 0.818273 | 2.136324e-52 | -8.615850e-47 |
| Msa0152870 | Msa1329540 | 0.805454 | 1.324478e-49 | -8.615850e-47 |
| Msa0152870 | Msa1333560 | 0.828701 | 7.765242e-55 | -8.615850e-47 |
| Msa0152870 | Msa1333890 | 0.814802 | 1.279933e-51 | -8.615850e-47 |
| Msa0152870 | Msa1335160 | 0.815189 | 1.050371e-51 | -8.615850e-47 |
| Msa0152870 | Msa1360980 | 0.824268 | 8.849868e-54 | -8.615850e-47 |
| Msa0152870 | Msa1368080 | 0.849403 | 3.307137e-60 | -8.615850e-47 |
| Msa0152870 | Msa1369150 | 0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa0152870 | Msa1371520 | 0.820260 | 7.533405e-53 | -8.615850e-47 |
| Msa0152870 | Msa1373170 | 0.832472 | 9.270887e-56 | -8.615850e-47 |
| Msa0152870 | Msa1373820 | 0.828888 | 6.999504e-55 | -8.615850e-47 |
| Msa0152870 | Msa1385110 | 0.804047 | 2.605031e-49 | -8.615850e-47 |
| Msa0152870 | Msa1391480 | 0.801332 | 9.465488e-49 | -8.615850e-47 |
| Msa0152870 | Msa1398790 | 0.801264 | 9.773850e-49 | -8.615850e-47 |
| Msa0152870 | Msa1399770 | 0.815888 | 7.340616e-52 | -8.615850e-47 |
| Msa0152870 | Msa1403570 | 0.806964 | 6.368347e-50 | -8.615850e-47 |
| Msa0152870 | Msa1418240 | 0.820735 | 5.861575e-53 | -8.615850e-47 |
| Msa0152870 | Msa1432920 | 0.810853 | 9.374818e-51 | -8.615850e-47 |
| Msa0152870 | Msa1443930 | 0.817406 | 3.351975e-52 | -8.615850e-47 |
| Msa0152870 | Msa1459460 | 0.825846 | 3.751416e-54 | -8.615850e-47 |
| Msa0152870 | Msa1462910 | 0.803340 | 3.653562e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152870 | MtrunA17_Chr1g0162021 | 97.264 | 658 | 18 | 0 | 1 | 658 | 1 | 658 | 0.0 | 1323 |
| Msa0152870 | MtrunA17_Chr1g0162051 | 68.421 | 437 | 113 | 7 | 238 | 658 | 1 | 428 | 0.0 | 584 |
| Msa0152870 | MtrunA17_Chr1g0162041 | 74.874 | 199 | 37 | 2 | 1 | 199 | 1 | 186 | 1.20e-100 | 305 |
| Msa0152870 | MtrunA17_Chr1g0196531 | 30.957 | 533 | 280 | 17 | 46 | 564 | 38 | 496 | 4.72e-66 | 226 |
| Msa0152870 | MtrunA17_Chr7g0259341 | 31.413 | 538 | 278 | 17 | 42 | 564 | 23 | 484 | 5.74e-64 | 220 |
| Msa0152870 | MtrunA17_Chr1g0150581 | 29.526 | 359 | 214 | 13 | 140 | 479 | 65 | 403 | 5.87e-34 | 136 |
| Msa0152870 | MtrunA17_Chr2g0277921 | 31.154 | 260 | 163 | 6 | 222 | 466 | 153 | 411 | 8.28e-32 | 129 |
| Msa0152870 | MtrunA17_Chr2g0277881 | 30.980 | 255 | 167 | 6 | 222 | 469 | 19 | 271 | 1.49e-29 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0152870 | AT1G14710.2 | 45.617 | 616 | 267 | 18 | 1 | 589 | 1 | 575 | 1.29e-159 | 472 |
| Msa0152870 | AT1G14710.1 | 45.617 | 616 | 267 | 18 | 1 | 589 | 1 | 575 | 1.29e-159 | 472 |
| Msa0152870 | AT4G02940.1 | 30.541 | 573 | 327 | 14 | 46 | 597 | 47 | 569 | 7.32e-65 | 224 |
| Msa0152870 | AT2G48080.1 | 33.465 | 254 | 154 | 5 | 213 | 464 | 117 | 357 | 4.36e-38 | 147 |
| Msa0152870 | AT2G48080.1 | 31.319 | 182 | 104 | 5 | 46 | 209 | 23 | 201 | 8.64e-17 | 84.0 |
| Msa0152870 | AT2G17970.9 | 34.454 | 238 | 143 | 5 | 252 | 477 | 123 | 359 | 8.39e-35 | 137 |
| Msa0152870 | AT2G17970.2 | 34.454 | 238 | 143 | 5 | 252 | 477 | 123 | 359 | 8.39e-35 | 137 |
| Msa0152870 | AT2G17970.3 | 34.454 | 238 | 143 | 5 | 252 | 477 | 123 | 359 | 8.39e-35 | 137 |
| Msa0152870 | AT2G17970.5 | 34.454 | 238 | 143 | 5 | 252 | 477 | 156 | 392 | 1.10e-34 | 138 |
| Msa0152870 | AT2G17970.7 | 34.454 | 238 | 143 | 5 | 252 | 477 | 156 | 392 | 1.10e-34 | 138 |
| Msa0152870 | AT2G17970.10 | 34.454 | 238 | 143 | 5 | 252 | 477 | 114 | 350 | 1.42e-34 | 137 |
| Msa0152870 | AT2G17970.1 | 34.454 | 238 | 143 | 5 | 252 | 477 | 197 | 433 | 2.67e-34 | 137 |
| Msa0152870 | AT1G48980.2 | 33.203 | 256 | 151 | 7 | 222 | 466 | 50 | 296 | 6.40e-33 | 129 |
| Msa0152870 | AT1G48980.1 | 33.203 | 256 | 151 | 7 | 222 | 466 | 54 | 300 | 7.02e-33 | 129 |
| Msa0152870 | AT2G17970.4 | 34.597 | 211 | 130 | 4 | 252 | 455 | 123 | 332 | 1.63e-32 | 129 |
| Msa0152870 | AT2G17970.8 | 34.597 | 211 | 130 | 4 | 252 | 455 | 197 | 406 | 8.13e-32 | 128 |
| Msa0152870 | AT4G36090.2 | 31.855 | 248 | 156 | 5 | 252 | 487 | 133 | 379 | 9.99e-32 | 129 |
| Msa0152870 | AT4G36090.3 | 31.855 | 248 | 156 | 5 | 252 | 487 | 201 | 447 | 2.58e-31 | 129 |
| Msa0152870 | AT1G48980.3 | 32.787 | 244 | 144 | 7 | 222 | 454 | 54 | 288 | 2.54e-30 | 122 |
| Msa0152870 | AT4G36090.5 | 33.333 | 210 | 132 | 4 | 252 | 454 | 201 | 409 | 1.86e-28 | 118 |
| Msa0152870 | AT2G17970.6 | 33.333 | 186 | 116 | 4 | 252 | 430 | 197 | 381 | 4.12e-23 | 102 |
| Msa0152870 | AT4G36090.4 | 33.511 | 188 | 104 | 6 | 252 | 432 | 201 | 374 | 1.03e-20 | 95.1 |
| Msa0152870 | AT4G36090.1 | 33.511 | 188 | 104 | 6 | 252 | 432 | 201 | 374 | 1.03e-20 | 95.1 |
Find 198 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTTCCATGTCCTCTTA+TGG | 0.176074 | 1_4:-15863946 | None:intergenic |
| GTTCATTGGTCAATGATTTA+AGG | 0.182023 | 1_4:+15862908 | Msa0152870:CDS |
| ACCTCTACGATAAAGGAAAA+TGG | 0.206612 | 1_4:+15866307 | Msa0152870:CDS |
| GGGAAGGATGTATAACATTT+TGG | 0.220996 | 1_4:+15866613 | Msa0152870:three_prime_UTR |
| TTCAGCAGAGGAGGGTTAAT+TGG | 0.239558 | 1_4:+15861086 | Msa0152870:CDS |
| GTCAGCATTTAGGTGTTATT+GGG | 0.268959 | 1_4:+15861029 | Msa0152870:CDS |
| CATTTGTCTCAGAGCACTTT+GGG | 0.274989 | 1_4:+15864437 | Msa0152870:CDS |
| TGTCAGCATTTAGGTGTTAT+TGG | 0.294663 | 1_4:+15861028 | Msa0152870:CDS |
| GTGAGATCTACGAATGAAAA+AGG | 0.301352 | 1_4:-15860630 | None:intergenic |
| ACTGAATGTGACATGACTTT+TGG | 0.308787 | 1_4:+15864409 | Msa0152870:CDS |
| TCTCTTCCATGTCCTCTTAT+GGG | 0.320704 | 1_4:-15863945 | None:intergenic |
| TATTCTGCTGTTCAAGTAAC+CGG | 0.321185 | 1_4:+15866019 | Msa0152870:CDS |
| ATTTCCCTTGCATCACTAGA+AGG | 0.334442 | 1_4:-15865802 | None:intergenic |
| GCCGGAAAATGCTTAATTTC+CGG | 0.334696 | 1_4:-15860857 | None:intergenic |
| AGAGAGATGGGTTTATGAAT+TGG | 0.335350 | 1_4:+15860960 | Msa0152870:CDS |
| AACATTTGGCCGTCTTCATT+TGG | 0.344951 | 1_4:+15864361 | Msa0152870:CDS |
| GTCAATGATTTAAGGGTTGC+TGG | 0.346194 | 1_4:+15862916 | Msa0152870:CDS |
| TTCATTGGTCAATGATTTAA+GGG | 0.347438 | 1_4:+15862909 | Msa0152870:CDS |
| TGGTGGCAAAGTTGGATATA+AGG | 0.350502 | 1_4:+15861366 | Msa0152870:CDS |
| ACCATTCAACGCCAAACATT+TGG | 0.352190 | 1_4:+15864347 | Msa0152870:CDS |
| GATTGTTTGTGTCAGCATTT+AGG | 0.352627 | 1_4:+15861019 | Msa0152870:CDS |
| AACAATGGCTGCATGCTATT+AGG | 0.355623 | 1_4:-15866073 | None:intergenic |
| AGTTTCAAAACTTGGTTCAT+TGG | 0.358902 | 1_4:+15862894 | Msa0152870:CDS |
| ATCTCTCTCTAATCTCTCAT+TGG | 0.361935 | 1_4:-15866480 | None:intergenic |
| ATGCGTTGTTTGTGAATAGA+AGG | 0.371926 | 1_4:-15865851 | None:intergenic |
| GAACAGGCTATAGAGGAAAA+AGG | 0.372518 | 1_4:+15866430 | Msa0152870:CDS |
| GTTTGTGAAGCCGGTTGTTA+AGG | 0.375526 | 1_4:+15861195 | Msa0152870:CDS |
| AATTCCAACCTCTACGATAA+AGG | 0.375623 | 1_4:+15866300 | Msa0152870:CDS |
| AATGAAGACGGCCAAATGTT+TGG | 0.380699 | 1_4:-15864358 | None:intergenic |
| CCAATCCCGCCTGGCTCTAC+AGG | 0.389178 | 1_4:+15866142 | Msa0152870:CDS |
| CGCGTACGCAACCTCGTTAA+CGG | 0.390413 | 1_4:-15861140 | None:intergenic |
| CCTCCTCGAGTCGTTGTTCC+CGG | 0.394340 | 1_4:+15866193 | Msa0152870:CDS |
| CTTCAGGTTAATGTTGTTGA+AGG | 0.394691 | 1_4:+15862835 | Msa0152870:intron |
| GTTAAATCTGGTGGCAAAGT+TGG | 0.395532 | 1_4:+15861358 | Msa0152870:CDS |
| TTCCTAAACTCCTTAACAAC+CGG | 0.401772 | 1_4:-15861205 | None:intergenic |
| CCTGTAGAGCCAGGCGGGAT+TGG | 0.404095 | 1_4:-15866142 | None:intergenic |
| TGCAGCAGGTGGCGTGGAGG+CGG | 0.410514 | 1_4:+15861164 | Msa0152870:CDS |
| TACCTTAACTGAAGTGAACT+TGG | 0.411064 | 1_4:+15866270 | Msa0152870:CDS |
| AGCAATGTCAAGCTTTCTCT+TGG | 0.412536 | 1_4:+15864469 | Msa0152870:CDS |
| GCAGCAGAGGTTTGTGAAGC+CGG | 0.415066 | 1_4:+15861186 | Msa0152870:CDS |
| CACAGGTGTAGCAAATTGTA+TGG | 0.416248 | 1_4:-15866119 | None:intergenic |
| ACCCAAGTTCACTTCAGTTA+AGG | 0.419432 | 1_4:-15866272 | None:intergenic |
| AATTGTATGGGAGTTGCAAC+TGG | 0.420597 | 1_4:-15866106 | None:intergenic |
| GTAATGAGAAGAAAGGAGTT+TGG | 0.422020 | 1_4:-15860581 | None:intergenic |
| GCCAAATGTTTGGCGTTGAA+TGG | 0.425318 | 1_4:-15864348 | None:intergenic |
| TTAAGGGTTGCTGGAAGAAA+AGG | 0.425939 | 1_4:+15862925 | Msa0152870:CDS |
| AGCCGGTTGTTAAGGAGTTT+AGG | 0.431475 | 1_4:+15861203 | Msa0152870:CDS |
| AGTACTGAAGTTTCAAAACT+TGG | 0.433213 | 1_4:+15862886 | Msa0152870:CDS |
| TCTAATCATAGCAATACTAA+TGG | 0.437415 | 1_4:+15866334 | Msa0152870:CDS |
| AAGAGTGAAGAAGTTAAATC+TGG | 0.439367 | 1_4:+15861346 | Msa0152870:CDS |
| CCTCTACGATAAAGGAAAAT+GGG | 0.441941 | 1_4:+15866308 | Msa0152870:CDS |
| GTTAGCAATGAGATGTTTGA+TGG | 0.442976 | 1_4:+15862684 | Msa0152870:CDS |
| ACATTGTCCACGTCAGCAAT+TGG | 0.447329 | 1_4:-15863987 | None:intergenic |
| TGAAGTTGAACAGGCTATAG+AGG | 0.449054 | 1_4:+15866423 | Msa0152870:CDS |
| TGCTGCTGTTGCTGTGGTGG+TGG | 0.450073 | 1_4:-15860911 | None:intergenic |
| GTCAGGAAAAGCGTATAAAC+AGG | 0.452435 | 1_4:-15864388 | None:intergenic |
| TCACCAAAAGGTAAAATGAA+TGG | 0.458597 | 1_4:+15866358 | Msa0152870:CDS |
| ATGGGAGTTGCAACTGGCGC+TGG | 0.459514 | 1_4:-15866100 | None:intergenic |
| TTAAGGAGTTTAGGAAGGGT+AGG | 0.460250 | 1_4:+15861212 | Msa0152870:CDS |
| GTCAAGCTTTCTCTTGGACC+TGG | 0.461574 | 1_4:+15864475 | Msa0152870:CDS |
| AATACTAATGGTTCACCAAA+AGG | 0.461948 | 1_4:+15866346 | Msa0152870:CDS |
| AGGTGCAACTGAAGTTGAAC+AGG | 0.464777 | 1_4:+15866414 | Msa0152870:CDS |
| CAGAGGTTTGAGGGTGGGAA+TGG | 0.465691 | 1_4:+15861241 | Msa0152870:CDS |
| ACAGAATGTGCATCAAATTC+TGG | 0.468027 | 1_4:+15862147 | Msa0152870:CDS |
| TTGGATTCGTAGCGAATTCG+CGG | 0.468773 | 1_4:+15860979 | Msa0152870:CDS |
| ACAGGAGTCTTCCTTCCGCC+TGG | 0.470551 | 1_4:+15866217 | Msa0152870:CDS |
| ACATTTGTCTCAGAGCACTT+TGG | 0.470759 | 1_4:+15864436 | Msa0152870:CDS |
| TTAGGTGTTATTGGGGAGAG+TGG | 0.471463 | 1_4:+15861037 | Msa0152870:CDS |
| CGAGGAGGAGGATGCCTTGG+AGG | 0.472071 | 1_4:-15866178 | None:intergenic |
| AAATCGACGATGCAAGCATC+AGG | 0.473203 | 1_4:-15864198 | None:intergenic |
| TAGGCAATGGCAGAGGTTTG+AGG | 0.474866 | 1_4:+15861231 | Msa0152870:CDS |
| TGGCGTGGAGGCGGCAGCAG+AGG | 0.475670 | 1_4:+15861173 | Msa0152870:CDS |
| ACACCTGTGCCAATCCCGCC+TGG | 0.477942 | 1_4:+15866133 | Msa0152870:CDS |
| GGTGAGTATGATCATGTTGT+TGG | 0.481124 | 1_4:+15861058 | Msa0152870:CDS |
| GAAAATCATCGTCGTGGTGA+AGG | 0.489467 | 1_4:+15861289 | Msa0152870:CDS |
| CGGAAGGAAGACTCCTGTGC+CGG | 0.489719 | 1_4:-15866212 | None:intergenic |
| CAAGAATGCAATGGTAATGC+AGG | 0.494423 | 1_4:+15866394 | Msa0152870:CDS |
| CATCGTCGATTTCTATAATG+AGG | 0.495227 | 1_4:+15864209 | Msa0152870:CDS |
| GGACGATGACTAATATGATT+CGG | 0.496573 | 1_4:-15865980 | None:intergenic |
| GTTTGAGGGTGGGAATGGTA+AGG | 0.499098 | 1_4:+15861246 | Msa0152870:CDS |
| TGTTGCTGCTGTTGCTGTGG+TGG | 0.500371 | 1_4:-15860914 | None:intergenic |
| CGACATATGTGGTTAACAAA+AGG | 0.500536 | 1_4:+15863922 | Msa0152870:CDS |
| GGTGTTACTGCATTTCCCAT+TGG | 0.507593 | 1_4:-15860836 | None:intergenic |
| CGAGTCGTTGTTCCCGGCAC+AGG | 0.509569 | 1_4:+15866199 | Msa0152870:CDS |
| AAGTCATGTCACATTCAGTC+AGG | 0.512515 | 1_4:-15864405 | None:intergenic |
| TCCATCCTGTAGAGCCAGGC+GGG | 0.513497 | 1_4:-15866147 | None:intergenic |
| GGAAGGAAGACTCCTGTGCC+GGG | 0.513713 | 1_4:-15866211 | None:intergenic |
| GAGCCAGGCGGGATTGGCAC+AGG | 0.514193 | 1_4:-15866136 | None:intergenic |
| ACTCGAGGAGGAGGATGCCT+TGG | 0.514438 | 1_4:-15866181 | None:intergenic |
| ACAGTCCATCCTGTAGAGCC+AGG | 0.516590 | 1_4:-15866151 | None:intergenic |
| AATTTCCAGAGCTCTTCAAA+AGG | 0.517631 | 1_4:-15862104 | None:intergenic |
| TTTCCGGCGGTGGTTACCGC+CGG | 0.518436 | 1_4:+15860872 | Msa0152870:CDS |
| GGAAGAAAAGGACAATTTCA+AGG | 0.519573 | 1_4:+15862937 | Msa0152870:CDS |
| TGAGATGAGTTAGCAGAGCC+AGG | 0.521622 | 1_4:-15866235 | None:intergenic |
| TCAAGTAACCGGGGTGCTGC+CGG | 0.522831 | 1_4:+15866030 | Msa0152870:CDS |
| AAGAGCTCTGGAAATTCTCA+AGG | 0.523667 | 1_4:+15862111 | Msa0152870:CDS |
| GAGGGTGGGAATGGTAAGGA+AGG | 0.523988 | 1_4:+15861250 | Msa0152870:CDS |
| TTGAACAGCAGAATAATGCT+TGG | 0.524124 | 1_4:-15866011 | None:intergenic |
| TGCGTACGCGTTGCAGCAGG+TGG | 0.527248 | 1_4:+15861153 | Msa0152870:CDS |
| AACGTGAGTGGTTCCACCAC+AGG | 0.529106 | 1_4:+15862651 | Msa0152870:CDS |
| TGGAAGAGAGATGATTCAGT+TGG | 0.529263 | 1_4:+15863959 | Msa0152870:CDS |
| TGAGATGTTTGATGGGAAGA+TGG | 0.533285 | 1_4:+15862692 | Msa0152870:CDS |
| ACTGAAGTGAACTTGGGTGT+TGG | 0.533352 | 1_4:+15866277 | Msa0152870:CDS |
| AGGCAATGGCAGAGGTTTGA+GGG | 0.539109 | 1_4:+15861232 | Msa0152870:CDS |
| GTTAACAAAAGGCCCATAAG+AGG | 0.539978 | 1_4:+15863933 | Msa0152870:CDS |
| TTTGGCCGTCTTCATTTGGA+AGG | 0.540261 | 1_4:+15864365 | Msa0152870:CDS |
| TCAAGCTTTCTCTTGGACCT+GGG | 0.542395 | 1_4:+15864476 | Msa0152870:CDS |
| AATGTGACAGCGTCGTTCAA+AGG | 0.545588 | 1_4:+15864005 | Msa0152870:CDS |
| GGTTGCGTACGCGTTGCAGC+AGG | 0.545735 | 1_4:+15861150 | Msa0152870:CDS |
| TGAACAGCAGAATAATGCTT+GGG | 0.545822 | 1_4:-15866010 | None:intergenic |
| ATTCTGCTGTTCAAGTAACC+GGG | 0.548410 | 1_4:+15866020 | Msa0152870:CDS |
| GGTTTGTTGATGAGAGAGAT+GGG | 0.550236 | 1_4:+15860948 | Msa0152870:CDS |
| CTCAATGATATCTTGAAACA+AGG | 0.552597 | 1_4:-15864142 | None:intergenic |
| TCAAGATATCATTGAGCGCA+TGG | 0.553274 | 1_4:+15864149 | Msa0152870:CDS |
| TGATGTTGCTGCTGTTGCTG+TGG | 0.554152 | 1_4:-15860917 | None:intergenic |
| TTGTTGAGTAATGAGAAGAA+AGG | 0.554371 | 1_4:-15860588 | None:intergenic |
| GGAAGAGAGATGATTCAGTT+GGG | 0.559430 | 1_4:+15863960 | Msa0152870:CDS |
| TGGTTTGTTGATGAGAGAGA+TGG | 0.561608 | 1_4:+15860947 | Msa0152870:CDS |
| TGCTATTAGGAGCAACATGT+AGG | 0.561743 | 1_4:-15866060 | None:intergenic |
| AATGAGAGATTAGAGAGAGA+TGG | 0.562454 | 1_4:+15866482 | Msa0152870:exon |
| TTGGTGCAATTCAGCAGAGG+AGG | 0.562955 | 1_4:+15861077 | Msa0152870:CDS |
| AAAATCATCGTCGTGGTGAA+GGG | 0.566281 | 1_4:+15861290 | Msa0152870:CDS |
| GGAAGGGTAGGCAATGGCAG+AGG | 0.566349 | 1_4:+15861224 | Msa0152870:CDS |
| TCCCGCCTGGCTCTACAGGA+TGG | 0.566829 | 1_4:+15866146 | Msa0152870:CDS |
| GGTTGTTAAGGAGTTTAGGA+AGG | 0.567040 | 1_4:+15861207 | Msa0152870:CDS |
| GGAACAACGACTCGAGGAGG+AGG | 0.567084 | 1_4:-15866190 | None:intergenic |
| AGAGATGGAAAGCTTATCAA+AGG | 0.567468 | 1_4:+15866497 | Msa0152870:three_prime_UTR |
| TTTCCCTTGCATCACTAGAA+GGG | 0.569855 | 1_4:-15865801 | None:intergenic |
| GAATAATGCTTGGGAGCTAA+CGG | 0.572073 | 1_4:-15866001 | None:intergenic |
| GACACTGCTGAGGAGAAGAA+AGG | 0.574319 | 1_4:+15861403 | Msa0152870:CDS |
| TCACCGGCGGTAACCACCGC+CGG | 0.577073 | 1_4:-15860875 | None:intergenic |
| TTCGGAGATCTGTTTGATGC+GGG | 0.577849 | 1_4:-15865962 | None:intergenic |
| GATGGACTGTGGCTCCTCCA+AGG | 0.578865 | 1_4:+15866164 | Msa0152870:CDS |
| TCAGCATTTAGGTGTTATTG+GGG | 0.581125 | 1_4:+15861030 | Msa0152870:CDS |
| GGAATGGAACTAACAAAGGA+AGG | 0.582272 | 1_4:-15866649 | None:intergenic |
| AGTTAGCAGAGCCAGGCGGA+AGG | 0.584884 | 1_4:-15866228 | None:intergenic |
| GCAAGACCTTGAGCATCACT+TGG | 0.587423 | 1_4:-15865914 | None:intergenic |
| ACTGGCGCTGGGACAAACAA+TGG | 0.587978 | 1_4:-15866088 | None:intergenic |
| CAAAATGTAAAGAGCGGCAA+CGG | 0.588999 | 1_4:+15866556 | Msa0152870:three_prime_UTR |
| ACGCGTTGCAGCAGGTGGCG+TGG | 0.589277 | 1_4:+15861158 | Msa0152870:CDS |
| GATATAACATTATACTGCAA+AGG | 0.592804 | 1_4:+15866581 | Msa0152870:three_prime_UTR |
| ATGATATCTTGAAACAAGGA+AGG | 0.593091 | 1_4:-15864138 | None:intergenic |
| AACTCATCTCAGCACTCGCA+AGG | 0.594014 | 1_4:+15866247 | Msa0152870:CDS |
| GCTATTAGGAGCAACATGTA+GGG | 0.594317 | 1_4:-15866059 | None:intergenic |
| GCAACATGTAGGGATGGAGC+CGG | 0.594320 | 1_4:-15866049 | None:intergenic |
| AGTTTAGGAAGGGTAGGCAA+TGG | 0.596438 | 1_4:+15861218 | Msa0152870:CDS |
| AACAGGGAGTCCGACATATG+TGG | 0.596795 | 1_4:+15863911 | Msa0152870:intron |
| AGGTCCCTTCTAGTGATGCA+AGG | 0.600287 | 1_4:+15865797 | Msa0152870:intron |
| AAAAGGCCCATAAGAGGACA+TGG | 0.601532 | 1_4:+15863939 | Msa0152870:CDS |
| TGGGAGTTGCAACTGGCGCT+GGG | 0.602477 | 1_4:-15866099 | None:intergenic |
| GGTCCCTTCTAGTGATGCAA+GGG | 0.605574 | 1_4:+15865798 | Msa0152870:intron |
| ATACTGCAAAGGAGAGAACA+AGG | 0.606432 | 1_4:+15866592 | Msa0152870:three_prime_UTR |
| AGAAGGAATGGAACTAACAA+AGG | 0.607159 | 1_4:-15866653 | None:intergenic |
| TGGTCTGTACTGCATCTCAC+CGG | 0.608831 | 1_4:-15860891 | None:intergenic |
| GGATGGAGCCGGCAGCACCC+CGG | 0.612297 | 1_4:-15866038 | None:intergenic |
| AATGTAAAGAGCGGCAACGG+TGG | 0.613143 | 1_4:+15866559 | Msa0152870:three_prime_UTR |
| TGGTGCAATTCAGCAGAGGA+GGG | 0.615294 | 1_4:+15861078 | Msa0152870:CDS |
| TTAGGAGCAACATGTAGGGA+TGG | 0.616506 | 1_4:-15866055 | None:intergenic |
| AGTGAAGAAGTTAAATCTGG+TGG | 0.616931 | 1_4:+15861349 | Msa0152870:CDS |
| ACCTTAACTGAAGTGAACTT+GGG | 0.617201 | 1_4:+15866271 | Msa0152870:CDS |
| ACAGGTGTAGCAAATTGTAT+GGG | 0.617438 | 1_4:-15866118 | None:intergenic |
| AATGGCAGAGGTTTGAGGGT+GGG | 0.618784 | 1_4:+15861236 | Msa0152870:CDS |
| ATTCGGAGATCTGTTTGATG+CGG | 0.619364 | 1_4:-15865963 | None:intergenic |
| GGGTGTTCCAATTGCTGACG+TGG | 0.620031 | 1_4:+15863980 | Msa0152870:CDS |
| ATTGAAAGACAAGAATGCAA+TGG | 0.620535 | 1_4:+15866385 | Msa0152870:CDS |
| AGGGTGGGAATGGTAAGGAA+GGG | 0.630717 | 1_4:+15861251 | Msa0152870:CDS |
| CAATGGCAGAGGTTTGAGGG+TGG | 0.636238 | 1_4:+15861235 | Msa0152870:CDS |
| TTAGCAATGAGATGTTTGAT+GGG | 0.636295 | 1_4:+15862685 | Msa0152870:CDS |
| CTCCGTCAGCAACTTCACAT+CGG | 0.637006 | 1_4:+15865936 | Msa0152870:CDS |
| GAATGTGCATCAAATTCTGG+AGG | 0.638203 | 1_4:+15862150 | Msa0152870:CDS |
| ACAGGCCTTCCAAATGAAGA+CGG | 0.639412 | 1_4:-15864370 | None:intergenic |
| GTTGTTAAGGAGTTTAGGAA+GGG | 0.642734 | 1_4:+15861208 | Msa0152870:CDS |
| CGTTGCAGCAGGTGGCGTGG+AGG | 0.643887 | 1_4:+15861161 | Msa0152870:CDS |
| AATGGGAAATGCAGTAACAC+CGG | 0.644726 | 1_4:+15860838 | Msa0152870:CDS |
| ATTTGTCTCAGAGCACTTTG+GGG | 0.647839 | 1_4:+15864438 | Msa0152870:CDS |
| AATCAACAACAGAACGTGAG+TGG | 0.649122 | 1_4:+15862639 | Msa0152870:CDS |
| TTGTTGGTGCAATTCAGCAG+AGG | 0.652480 | 1_4:+15861074 | Msa0152870:CDS |
| CCGGGAACAACGACTCGAGG+AGG | 0.654433 | 1_4:-15866193 | None:intergenic |
| GTGCCGGGAACAACGACTCG+AGG | 0.655043 | 1_4:-15866196 | None:intergenic |
| AGCAGCAACATCAACAACAA+TGG | 0.658542 | 1_4:+15860927 | Msa0152870:CDS |
| GAATCTGACAGATAAGAATG+TGG | 0.660059 | 1_4:+15864107 | Msa0152870:intron |
| TTCTGCTGTTCAAGTAACCG+GGG | 0.662775 | 1_4:+15866021 | Msa0152870:CDS |
| CTTAACAGACATGACTTGTG+AGG | 0.663477 | 1_4:-15864175 | None:intergenic |
| TAAGAATTTAGACACTGCTG+AGG | 0.667493 | 1_4:+15861393 | Msa0152870:CDS |
| GCAAAGGAGAGAACAAGGGA+AGG | 0.672030 | 1_4:+15866597 | Msa0152870:three_prime_UTR |
| TTGAAGCAAAATGTAAAGAG+CGG | 0.673556 | 1_4:+15866550 | Msa0152870:three_prime_UTR |
| TGCGCAAAAGAATTTAACGA+GGG | 0.675641 | 1_4:-15866748 | None:intergenic |
| AAAGGAAAGTGTGAAGATGG+TGG | 0.677411 | 1_4:-15860612 | None:intergenic |
| GACCGATGTGAAGTTGCTGA+CGG | 0.677926 | 1_4:-15865938 | None:intergenic |
| TCTGTACTGCATCTCACCGG+CGG | 0.680815 | 1_4:-15860888 | None:intergenic |
| TGGCTCTACAGGATGGACTG+TGG | 0.684505 | 1_4:+15866153 | Msa0152870:CDS |
| TACTGCAAAGGAGAGAACAA+GGG | 0.689014 | 1_4:+15866593 | Msa0152870:three_prime_UTR |
| TTAATGTTGTTGAAGGACTG+AGG | 0.691860 | 1_4:+15862842 | Msa0152870:CDS |
| AGTGTAGAAAATCATCGTCG+TGG | 0.692889 | 1_4:+15861283 | Msa0152870:CDS |
| TCTCTGCCAAGTGATGCTCA+AGG | 0.700665 | 1_4:+15865908 | Msa0152870:CDS |
| GATGAGTTAGCAGAGCCAGG+CGG | 0.703314 | 1_4:-15866232 | None:intergenic |
| ATGCGCAAAAGAATTTAACG+AGG | 0.711419 | 1_4:-15866749 | None:intergenic |
| GTCCATCCTGTAGAGCCAGG+CGG | 0.716481 | 1_4:-15866148 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAATTAAAAATTA+GGG | - | chr1_4:15860737-15860756 | None:intergenic | 0.0% |
| !! | TAATAAATAAATTAAAAATT+AGG | - | chr1_4:15860738-15860757 | None:intergenic | 0.0% |
| !!! | CTTTTATATTTTATTTTATG+GGG | + | chr1_4:15862798-15862817 | Msa0152870:intron | 10.0% |
| !!! | TTTTTTTTTTTCAATATACA+AGG | + | chr1_4:15863382-15863401 | Msa0152870:intron | 10.0% |
| !! | GACTAAATTTATTATAAAAA+AGG | - | chr1_4:15863525-15863544 | None:intergenic | 10.0% |
| !!! | TTGTATGTTTTTTTTTTTTT+TGG | + | chr1_4:15864239-15864258 | Msa0152870:intron | 10.0% |
| !!! | AAATATACAATTTAAAATTG+TGG | + | chr1_4:15864758-15864777 | Msa0152870:intron | 10.0% |
| !! | GATGATTAATTAATATAATA+AGG | - | chr1_4:15864843-15864862 | None:intergenic | 10.0% |
| !! | ATTTGATGGAAAAAAAATTA+GGG | - | chr1_4:15860681-15860700 | None:intergenic | 15.0% |
| !! | AATTTGATGGAAAAAAAATT+AGG | - | chr1_4:15860682-15860701 | None:intergenic | 15.0% |
| !!! | AATTTATTTTTCATATGATC+TGG | + | chr1_4:15861808-15861827 | Msa0152870:intron | 15.0% |
| !! | TAAGTGTATTTATGAAATTT+GGG | + | chr1_4:15862240-15862259 | Msa0152870:intron | 15.0% |
| !! | GATAGATATTTAAAAAGATT+AGG | - | chr1_4:15862438-15862457 | None:intergenic | 15.0% |
| !! | TAAAAGATATAAGAAAAAGA+AGG | - | chr1_4:15862784-15862803 | None:intergenic | 15.0% |
| !!! | TTATTTTTCATTCTTTGTTT+TGG | + | chr1_4:15863009-15863028 | Msa0152870:intron | 15.0% |
| !! | TATTCAAAAAAAGTTATCAA+AGG | + | chr1_4:15863218-15863237 | Msa0152870:intron | 15.0% |
| !! | ATTCAAAAAAAGTTATCAAA+GGG | + | chr1_4:15863219-15863238 | Msa0152870:intron | 15.0% |
| !!! | CATATATAACTCATTTTTTA+TGG | - | chr1_4:15863408-15863427 | None:intergenic | 15.0% |
| !!! | TTTTATATATTTTCCCATAT+AGG | + | chr1_4:15863563-15863582 | Msa0152870:intron | 15.0% |
| !!! | TTTTTTTTGTGCTTTTTTTT+TGG | + | chr1_4:15863681-15863700 | Msa0152870:intron | 15.0% |
| !!! | TTTTTTTGTGCTTTTTTTTT+GGG | + | chr1_4:15863682-15863701 | Msa0152870:intron | 15.0% |
| !!! | ATGTTTTTTTTTTTTTTGGA+AGG | + | chr1_4:15864243-15864262 | Msa0152870:intron | 15.0% |
| !!! | TGTTTTTTTTTTTTTTGGAA+GGG | + | chr1_4:15864244-15864263 | Msa0152870:intron | 15.0% |
| !! | AAAAAAAATTGACAACAATT+TGG | - | chr1_4:15864994-15865013 | None:intergenic | 15.0% |
| !! | TTACAAATAATCATAGTAAT+GGG | - | chr1_4:15865046-15865065 | None:intergenic | 15.0% |
| !! | ATTACAAATAATCATAGTAA+TGG | - | chr1_4:15865047-15865066 | None:intergenic | 15.0% |
| !! | TACTATGATTATTTGTAATT+AGG | + | chr1_4:15865048-15865067 | Msa0152870:intron | 15.0% |
| !!! | GTTTTTATTTACAATTTTTG+TGG | + | chr1_4:15865377-15865396 | Msa0152870:intron | 15.0% |
| !! | AATTATTGAATCTGAAAAAA+GGG | - | chr1_4:15865726-15865745 | None:intergenic | 15.0% |
| !! | ACAGAGTAAATAATAATAAT+AGG | - | chr1_4:15865768-15865787 | None:intergenic | 15.0% |
| !!! | ATAATCAGTTTTATCAATTG+CGG | - | chr1_4:15861729-15861748 | None:intergenic | 20.0% |
| !!! | AATGGTTTTAAATTGCAATT+CGG | + | chr1_4:15861851-15861870 | Msa0152870:intron | 20.0% |
| !! | AGTAGATGAAAAATTCAATA+TGG | - | chr1_4:15862042-15862061 | None:intergenic | 20.0% |
| !!! | ATATTGAATTTTTCATCTAC+TGG | + | chr1_4:15862041-15862060 | Msa0152870:intron | 20.0% |
| !! | ATAAAAAATCATCAATCTGA+TGG | + | chr1_4:15862081-15862100 | Msa0152870:CDS | 20.0% |
| !! | CTAAGTGTATTTATGAAATT+TGG | + | chr1_4:15862239-15862258 | Msa0152870:intron | 20.0% |
| !! | AAAAATGACAAAAAGAAATG+AGG | - | chr1_4:15862746-15862765 | None:intergenic | 20.0% |
| !! | AATGAAAAATAAATTAGCGA+TGG | - | chr1_4:15863001-15863020 | None:intergenic | 20.0% |
| !! | ATGATGGTCTAAAAAAAATT+GGG | - | chr1_4:15863662-15863681 | None:intergenic | 20.0% |
| !! | AATGATGGTCTAAAAAAAAT+TGG | - | chr1_4:15863663-15863682 | None:intergenic | 20.0% |
| !!! | AAAAAGCACAAAAAAAATGA+TGG | - | chr1_4:15863678-15863697 | None:intergenic | 20.0% |
| !!! | TTTTTTGTGCTTTTTTTTTG+GGG | + | chr1_4:15863683-15863702 | Msa0152870:intron | 20.0% |
| !! | GCCAATATCTTAAATTATAA+CGG | + | chr1_4:15863705-15863724 | Msa0152870:intron | 20.0% |
| !! | CCAATATCTTAAATTATAAC+GGG | + | chr1_4:15863706-15863725 | Msa0152870:intron | 20.0% |
| !! | CAATATCTTAAATTATAACG+GGG | + | chr1_4:15863707-15863726 | Msa0152870:intron | 20.0% |
| !! | AGTACAATAAATATTTGACT+TGG | - | chr1_4:15863762-15863781 | None:intergenic | 20.0% |
| !! | AACTTTAAGTATTATGTCTT+TGG | + | chr1_4:15863806-15863825 | Msa0152870:intron | 20.0% |
| !!! | GTTTTTTTTTTTTTTGGAAG+GGG | + | chr1_4:15864245-15864264 | Msa0152870:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGGAAGG+GGG | + | chr1_4:15864246-15864265 | Msa0152870:intron | 20.0% |
| !! | TCCATATTACAATTATCTAT+AGG | + | chr1_4:15864321-15864340 | Msa0152870:intron | 20.0% |
| !! | CCATATTACAATTATCTATA+GGG | + | chr1_4:15864322-15864341 | Msa0152870:intron | 20.0% |
| !!! | ATTTGTTAACCTTATTTGTT+TGG | + | chr1_4:15864503-15864522 | Msa0152870:intron | 20.0% |
| !!! | TATTTTGTTGTTGTTACTAT+TGG | + | chr1_4:15864538-15864557 | Msa0152870:intron | 20.0% |
| !! | AAAAAAAAACGACAACAATT+TGG | - | chr1_4:15864908-15864927 | None:intergenic | 20.0% |
| !! | TGGTTAACAAAGTTTAAATA+TGG | - | chr1_4:15864970-15864989 | None:intergenic | 20.0% |
| !! | TCATAGAAGACAATTAATTA+TGG | + | chr1_4:15865072-15865091 | Msa0152870:intron | 20.0% |
| !! | TACTTAGAAAGTAATACATT+TGG | - | chr1_4:15865207-15865226 | None:intergenic | 20.0% |
| !! | AAATGTATTACTTTCTAAGT+AGG | + | chr1_4:15865206-15865225 | Msa0152870:intron | 20.0% |
| !! | GAATTATTGAATCTGAAAAA+AGG | - | chr1_4:15865727-15865746 | None:intergenic | 20.0% |
| !! | TAATAATAGGCCATAATAAT+CGG | - | chr1_4:15865755-15865774 | None:intergenic | 20.0% |
| !! | ATATTAAGACAACAAAAAGA+AGG | - | chr1_4:15866673-15866692 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATTGAGTTTTCA+TGG | + | chr1_4:15860808-15860827 | Msa0152870:exon | 25.0% |
| !!! | GAAATGTTACTATTTTTAGC+AGG | - | chr1_4:15861981-15862000 | None:intergenic | 25.0% |
| ! | TTATTCAAATCATAGTCAAC+AGG | - | chr1_4:15862183-15862202 | None:intergenic | 25.0% |
| ! | AAAAAACAGCAAGTAATGTT+CGG | + | chr1_4:15862346-15862365 | Msa0152870:intron | 25.0% |
| !! | AAGATTAGGATGTCAATTTT+GGG | - | chr1_4:15862424-15862443 | None:intergenic | 25.0% |
| !! | AAAGATTAGGATGTCAATTT+TGG | - | chr1_4:15862425-15862444 | None:intergenic | 25.0% |
| ! | TTCATTGGTCAATGATTTAA+GGG | + | chr1_4:15862909-15862928 | Msa0152870:CDS | 25.0% |
| ! | ACCAACATTAAAAATATGTG+CGG | - | chr1_4:15863106-15863125 | None:intergenic | 25.0% |
| !! | GCTAACTATCATCTTTAAAA+TGG | + | chr1_4:15863265-15863284 | Msa0152870:intron | 25.0% |
| ! | TGATGGTCTAAAAAAAATTG+GGG | - | chr1_4:15863661-15863680 | None:intergenic | 25.0% |
| !! | CCCGTTATAATTTAAGATAT+TGG | - | chr1_4:15863709-15863728 | None:intergenic | 25.0% |
| !!! | TTGCAACATTTTGAAACTTA+GGG | - | chr1_4:15863851-15863870 | None:intergenic | 25.0% |
| !!! | ATTGCAACATTTTGAAACTT+AGG | - | chr1_4:15863852-15863871 | None:intergenic | 25.0% |
| ! | TGCTAATATCTTTAATGAAC+AGG | + | chr1_4:15863894-15863913 | Msa0152870:intron | 25.0% |
| ! | GCTAATATCTTTAATGAACA+GGG | + | chr1_4:15863895-15863914 | Msa0152870:intron | 25.0% |
| ! | TGGTCATTATTATAGAAGTA+GGG | - | chr1_4:15864070-15864089 | None:intergenic | 25.0% |
| ! | TTGGTCATTATTATAGAAGT+AGG | - | chr1_4:15864071-15864090 | None:intergenic | 25.0% |
| ! | TTCATTTAGTGAAACTTCAT+TGG | - | chr1_4:15864090-15864109 | None:intergenic | 25.0% |
| ! | TCAAATTTGTAAACGTAACA+CGG | + | chr1_4:15864296-15864315 | Msa0152870:intron | 25.0% |
| ! | CCCTATAGATAATTGTAATA+TGG | - | chr1_4:15864325-15864344 | None:intergenic | 25.0% |
| ! | TTGTATATTTGAACACGATT+TGG | - | chr1_4:15864748-15864767 | None:intergenic | 25.0% |
| !!! | GTTGATGATGTTTAAAATCA+TGG | + | chr1_4:15864780-15864799 | Msa0152870:intron | 25.0% |
| ! | TGGTTAACGAAGTTTAAATA+TGG | - | chr1_4:15864884-15864903 | None:intergenic | 25.0% |
| ! | AAAATTGACAACAATTTGGT+TGG | - | chr1_4:15864990-15865009 | None:intergenic | 25.0% |
| ! | AAACAAAAACCTAGAATTCA+TGG | - | chr1_4:15865330-15865349 | None:intergenic | 25.0% |
| ! | ATGTTACTGTGCTTATAATT+TGG | + | chr1_4:15865439-15865458 | Msa0152870:intron | 25.0% |
| !! | CTTTTAGTCAATTGTATTCA+AGG | + | chr1_4:15865483-15865502 | Msa0152870:intron | 25.0% |
| ! | TGAGTTAAATACATTGCTTA+TGG | + | chr1_4:15865651-15865670 | Msa0152870:intron | 25.0% |
| ! | AATTCAATACCCGATTATTA+TGG | + | chr1_4:15865742-15865761 | Msa0152870:intron | 25.0% |
| ! | AATAATAGGCCATAATAATC+GGG | - | chr1_4:15865754-15865773 | None:intergenic | 25.0% |
| ! | TCTAATCATAGCAATACTAA+TGG | + | chr1_4:15866334-15866353 | Msa0152870:CDS | 25.0% |
| !! | TTTCCATTCATTTTACCTTT+TGG | - | chr1_4:15866364-15866383 | None:intergenic | 25.0% |
| ! | GATATAACATTATACTGCAA+AGG | + | chr1_4:15866581-15866600 | Msa0152870:three_prime_UTR | 25.0% |
| TTGTTGAGTAATGAGAAGAA+AGG | - | chr1_4:15860591-15860610 | None:intergenic | 30.0% | |
| CGAAAAAGTGGAAAATTTGA+TGG | - | chr1_4:15860695-15860714 | None:intergenic | 30.0% | |
| ! | AAGGGAATTTTGTGGTTAAA+GGG | + | chr1_4:15861308-15861327 | Msa0152870:CDS | 30.0% |
| AAGAGTGAAGAAGTTAAATC+TGG | + | chr1_4:15861346-15861365 | Msa0152870:CDS | 30.0% | |
| ACTGTTAAACCACAATGTTA+GGG | + | chr1_4:15861502-15861521 | Msa0152870:intron | 30.0% | |
| ! | TACCGAGTATTTTCAAATAG+CGG | + | chr1_4:15861574-15861593 | Msa0152870:intron | 30.0% |
| AAACTGATTATACTACACCA+TGG | + | chr1_4:15861738-15861757 | Msa0152870:intron | 30.0% | |
| !! | TTTTCGTGTTGCAGTTTTAA+TGG | + | chr1_4:15861833-15861852 | Msa0152870:intron | 30.0% |
| !!! | TGATTTTAATTGCAGTCAAG+TGG | - | chr1_4:15861890-15861909 | None:intergenic | 30.0% |
| TAAATACACTTAGCAAAGTC+TGG | - | chr1_4:15862232-15862251 | None:intergenic | 30.0% | |
| CAAACTACATGTATCCTATA+AGG | - | chr1_4:15862532-15862551 | None:intergenic | 30.0% | |
| TTAGCAATGAGATGTTTGAT+GGG | + | chr1_4:15862685-15862704 | Msa0152870:CDS | 30.0% | |
| ! | AGTACTGAAGTTTCAAAACT+TGG | + | chr1_4:15862886-15862905 | Msa0152870:CDS | 30.0% |
| AGTTTCAAAACTTGGTTCAT+TGG | + | chr1_4:15862894-15862913 | Msa0152870:CDS | 30.0% | |
| GTTCATTGGTCAATGATTTA+AGG | + | chr1_4:15862908-15862927 | Msa0152870:CDS | 30.0% | |
| TTTGTCTGATTGTTATGCAA+TGG | + | chr1_4:15863048-15863067 | Msa0152870:intron | 30.0% | |
| !! | TCCGCACATATTTTTAATGT+TGG | + | chr1_4:15863102-15863121 | Msa0152870:intron | 30.0% |
| GTAGTTGAGTAGTTATCAAA+AGG | + | chr1_4:15863181-15863200 | Msa0152870:intron | 30.0% | |
| ! | TTATCAAAAGGAGGTCATTT+TGG | + | chr1_4:15863193-15863212 | Msa0152870:intron | 30.0% |
| CAAAAAAAGTTATCAAAGGG+AGG | + | chr1_4:15863222-15863241 | Msa0152870:intron | 30.0% | |
| AAGATGATAGTTAGCATCAA+AGG | - | chr1_4:15863260-15863279 | None:intergenic | 30.0% | |
| GAGTTATATATGTTCAGTGT+CGG | + | chr1_4:15863416-15863435 | Msa0152870:intron | 30.0% | |
| ! | AAAAACAAAGGGTTTGGAAT+GGG | - | chr1_4:15863635-15863654 | None:intergenic | 30.0% |
| AATTGGGGTACAAAAACAAA+GGG | - | chr1_4:15863646-15863665 | None:intergenic | 30.0% | |
| AAATTGGGGTACAAAAACAA+AGG | - | chr1_4:15863647-15863666 | None:intergenic | 30.0% | |
| GGTCTCTAAATTGTTTAAGA+CGG | + | chr1_4:15863728-15863747 | Msa0152870:intron | 30.0% | |
| !! | AAATATTTGACTTGGCATCA+GGG | - | chr1_4:15863754-15863773 | None:intergenic | 30.0% |
| !! | TAAATATTTGACTTGGCATC+AGG | - | chr1_4:15863755-15863774 | None:intergenic | 30.0% |
| !!! | TGCAACATTTTGAAACTTAG+GGG | - | chr1_4:15863850-15863869 | None:intergenic | 30.0% |
| ! | CTTTTGTTAACCACATATGT+CGG | - | chr1_4:15863924-15863943 | None:intergenic | 30.0% |
| TATTATAGAAGTAGGGAATG+TGG | - | chr1_4:15864063-15864082 | None:intergenic | 30.0% | |
| ATGATATCTTGAAACAAGGA+AGG | - | chr1_4:15864141-15864160 | None:intergenic | 30.0% | |
| CTCAATGATATCTTGAAACA+AGG | - | chr1_4:15864145-15864164 | None:intergenic | 30.0% | |
| AAGGTTAACAAATATTACCC+AGG | - | chr1_4:15864496-15864515 | None:intergenic | 30.0% | |
| ACTAGCATACCAAACAAATA+AGG | - | chr1_4:15864515-15864534 | None:intergenic | 30.0% | |
| TGGTTAATGCTATTCAAATG+TGG | + | chr1_4:15864601-15864620 | Msa0152870:intron | 30.0% | |
| TGTAATTAACCATGACTTTC+TGG | + | chr1_4:15864698-15864717 | Msa0152870:intron | 30.0% | |
| AAAAACGACAACAATTTGGT+TGG | - | chr1_4:15864904-15864923 | None:intergenic | 30.0% | |
| ATTTACCCTACCTAATACTA+GGG | - | chr1_4:15865141-15865160 | None:intergenic | 30.0% | |
| AATTTACCCTACCTAATACT+AGG | - | chr1_4:15865142-15865161 | None:intergenic | 30.0% | |
| ! | GTAGGGTAAATTGTTTTCTT+TGG | + | chr1_4:15865150-15865169 | Msa0152870:intron | 30.0% |
| ACCAAGTACATTTAAAGATG+AGG | - | chr1_4:15865179-15865198 | None:intergenic | 30.0% | |
| TTTCATCATCCATGAATTCT+AGG | + | chr1_4:15865318-15865337 | Msa0152870:intron | 30.0% | |
| ! | ATTTGGCTTAGTAACTTGAA+AGG | + | chr1_4:15865456-15865475 | Msa0152870:intron | 30.0% |
| ATATCATGCATCATGATTCA+CGG | - | chr1_4:15865520-15865539 | None:intergenic | 30.0% | |
| TGAATCATGATGCATGATAT+GGG | + | chr1_4:15865520-15865539 | Msa0152870:intron | 30.0% | |
| ACATTGCTTATGGTAATTAG+AGG | + | chr1_4:15865661-15865680 | Msa0152870:intron | 30.0% | |
| AATACTAATGGTTCACCAAA+AGG | + | chr1_4:15866346-15866365 | Msa0152870:CDS | 30.0% | |
| TCACCAAAAGGTAAAATGAA+TGG | + | chr1_4:15866358-15866377 | Msa0152870:CDS | 30.0% | |
| ATTGAAAGACAAGAATGCAA+TGG | + | chr1_4:15866385-15866404 | Msa0152870:CDS | 30.0% | |
| TTGAAGCAAAATGTAAAGAG+CGG | + | chr1_4:15866550-15866569 | Msa0152870:three_prime_UTR | 30.0% | |
| AAGACAACAAAAAGAAGGAA+TGG | - | chr1_4:15866668-15866687 | None:intergenic | 30.0% | |
| ! | GAAAAAGGAAAGTGTGAAGA+TGG | - | chr1_4:15860618-15860637 | None:intergenic | 35.0% |
| GTGAGATCTACGAATGAAAA+AGG | - | chr1_4:15860633-15860652 | None:intergenic | 35.0% | |
| GTGAAATTGAAGCGAAAAAG+TGG | - | chr1_4:15860707-15860726 | None:intergenic | 35.0% | |
| ! | ACCGGAAATTAAGCATTTTC+CGG | + | chr1_4:15860856-15860875 | Msa0152870:CDS | 35.0% |
| ! | AGAGAGATGGGTTTATGAAT+TGG | + | chr1_4:15860960-15860979 | Msa0152870:CDS | 35.0% |
| GATTGTTTGTGTCAGCATTT+AGG | + | chr1_4:15861019-15861038 | Msa0152870:CDS | 35.0% | |
| ! | TGTCAGCATTTAGGTGTTAT+TGG | + | chr1_4:15861028-15861047 | Msa0152870:CDS | 35.0% |
| !! | GTCAGCATTTAGGTGTTATT+GGG | + | chr1_4:15861029-15861048 | Msa0152870:CDS | 35.0% |
| !! | TCAGCATTTAGGTGTTATTG+GGG | + | chr1_4:15861030-15861049 | Msa0152870:CDS | 35.0% |
| TTCCTAAACTCCTTAACAAC+CGG | - | chr1_4:15861208-15861227 | None:intergenic | 35.0% | |
| GTTGTTAAGGAGTTTAGGAA+GGG | + | chr1_4:15861208-15861227 | Msa0152870:CDS | 35.0% | |
| ! | GAAGGGAATTTTGTGGTTAA+AGG | + | chr1_4:15861307-15861326 | Msa0152870:CDS | 35.0% |
| AGTGAAGAAGTTAAATCTGG+TGG | + | chr1_4:15861349-15861368 | Msa0152870:CDS | 35.0% | |
| TAAGAATTTAGACACTGCTG+AGG | + | chr1_4:15861393-15861412 | Msa0152870:CDS | 35.0% | |
| AGGAGAAGAAAGGTAAATGA+TGG | + | chr1_4:15861413-15861432 | Msa0152870:intron | 35.0% | |
| GGAGAAGAAAGGTAAATGAT+GGG | + | chr1_4:15861414-15861433 | Msa0152870:intron | 35.0% | |
| TTGTTCGATTATTTGAGTCG+TGG | + | chr1_4:15861439-15861458 | Msa0152870:intron | 35.0% | |
| !!! | TGAGTCGTGGTTTTAAATTG+CGG | + | chr1_4:15861452-15861471 | Msa0152870:intron | 35.0% |
| GCGATTGTAGATATAGTCAT+AGG | + | chr1_4:15861477-15861496 | Msa0152870:intron | 35.0% | |
| GACTGTTAAACCACAATGTT+AGG | + | chr1_4:15861501-15861520 | Msa0152870:intron | 35.0% | |
| TTTCACTAAATCGCATATCG+CGG | - | chr1_4:15861639-15861658 | None:intergenic | 35.0% | |
| !! | GTGAAAGTGTTGTCAAATAG+CGG | + | chr1_4:15861653-15861672 | Msa0152870:intron | 35.0% |
| TACTACACCATGGTTAATCT+TGG | + | chr1_4:15861748-15861767 | Msa0152870:intron | 35.0% | |
| TAGAGATCCAAGATTAACCA+TGG | - | chr1_4:15861758-15861777 | None:intergenic | 35.0% | |
| !!! | ACTATTTTTAGCAGGCCAAA+AGG | - | chr1_4:15861973-15861992 | None:intergenic | 35.0% |
| AATTTCCAGAGCTCTTCAAA+AGG | - | chr1_4:15862107-15862126 | None:intergenic | 35.0% | |
| ACAGAATGTGCATCAAATTC+TGG | + | chr1_4:15862147-15862166 | Msa0152870:CDS | 35.0% | |
| TGACAAACACAGAAAGATGA+GGG | - | chr1_4:15862386-15862405 | None:intergenic | 35.0% | |
| TTCATACACCATGTGCTTAT+AGG | + | chr1_4:15862496-15862515 | Msa0152870:intron | 35.0% | |
| !! | GTACAAGAGTATCAGTATGA+TGG | - | chr1_4:15862583-15862602 | None:intergenic | 35.0% |
| ! | AACAAAAGTTTTTCCTGTGG+TGG | - | chr1_4:15862667-15862686 | None:intergenic | 35.0% |
| ! | GCTAACAAAAGTTTTTCCTG+TGG | - | chr1_4:15862670-15862689 | None:intergenic | 35.0% |
| GTTAGCAATGAGATGTTTGA+TGG | + | chr1_4:15862684-15862703 | Msa0152870:CDS | 35.0% | |
| !!! | GGCATCTGTTTTTAATCTTC+AGG | + | chr1_4:15862819-15862838 | Msa0152870:intron | 35.0% |
| ! | CTTCAGGTTAATGTTGTTGA+AGG | + | chr1_4:15862835-15862854 | Msa0152870:intron | 35.0% |
| TTAATGTTGTTGAAGGACTG+AGG | + | chr1_4:15862842-15862861 | Msa0152870:CDS | 35.0% | |
| GGAAGAAAAGGACAATTTCA+AGG | + | chr1_4:15862937-15862956 | Msa0152870:CDS | 35.0% | |
| GTTGAGTAGTTATCAAAAGG+AGG | + | chr1_4:15863184-15863203 | Msa0152870:intron | 35.0% | |
| !! | ATTATAAAAAAGGTGCCTGC+CGG | - | chr1_4:15863515-15863534 | None:intergenic | 35.0% |
| CAAAAACAAAGGGTTTGGAA+TGG | - | chr1_4:15863636-15863655 | None:intergenic | 35.0% | |
| !!! | GCAACATTTTGAAACTTAGG+GGG | - | chr1_4:15863849-15863868 | None:intergenic | 35.0% |
| CGACATATGTGGTTAACAAA+AGG | + | chr1_4:15863922-15863941 | Msa0152870:CDS | 35.0% | |
| GAATCTGACAGATAAGAATG+TGG | + | chr1_4:15864107-15864126 | Msa0152870:intron | 35.0% | |
| !! | CATCGTCGATTTCTATAATG+AGG | + | chr1_4:15864209-15864228 | Msa0152870:CDS | 35.0% |
| ! | ACTGAATGTGACATGACTTT+TGG | + | chr1_4:15864409-15864428 | Msa0152870:CDS | 35.0% |
| ! | CTGAATGTGACATGACTTTT+GGG | + | chr1_4:15864410-15864429 | Msa0152870:CDS | 35.0% |
| GGTCAATTGTATTCAGTTGA+TGG | + | chr1_4:15864801-15864820 | Msa0152870:intron | 35.0% | |
| ! | ATGGTGTCAATTACGTTTAG+TGG | - | chr1_4:15864865-15864884 | None:intergenic | 35.0% |
| TTAGTTGAGTCCCTAGTATT+AGG | + | chr1_4:15865128-15865147 | Msa0152870:intron | 35.0% | |
| GCCTCATCTTTAAATGTACT+TGG | + | chr1_4:15865175-15865194 | Msa0152870:intron | 35.0% | |
| TTCATGGATGATGAAACACA+AGG | - | chr1_4:15865314-15865333 | None:intergenic | 35.0% | |
| GTGAATCATGATGCATGATA+TGG | + | chr1_4:15865519-15865538 | Msa0152870:intron | 35.0% | |
| GAATCATGATGCATGATATG+GGG | + | chr1_4:15865521-15865540 | Msa0152870:intron | 35.0% | |
| GTAACGATCGAAAAACTATG+CGG | - | chr1_4:15865567-15865586 | None:intergenic | 35.0% | |
| GTTTCATACCATTATGTTCG+TGG | + | chr1_4:15865617-15865636 | Msa0152870:intron | 35.0% | |
| ATTAACCTCCACGAACATAA+TGG | - | chr1_4:15865628-15865647 | None:intergenic | 35.0% | |
| ATTATGTTCGTGGAGGTTAA+TGG | + | chr1_4:15865627-15865646 | Msa0152870:intron | 35.0% | |
| ATTTACTCTGTTGCAACTGT+AGG | + | chr1_4:15865777-15865796 | Msa0152870:intron | 35.0% | |
| ATGCGTTGTTTGTGAATAGA+AGG | - | chr1_4:15865854-15865873 | None:intergenic | 35.0% | |
| GGACGATGACTAATATGATT+CGG | - | chr1_4:15865983-15866002 | None:intergenic | 35.0% | |
| TGAACAGCAGAATAATGCTT+GGG | - | chr1_4:15866013-15866032 | None:intergenic | 35.0% | |
| TTGAACAGCAGAATAATGCT+TGG | - | chr1_4:15866014-15866033 | None:intergenic | 35.0% | |
| TATTCTGCTGTTCAAGTAAC+CGG | + | chr1_4:15866019-15866038 | Msa0152870:CDS | 35.0% | |
| ACAGGTGTAGCAAATTGTAT+GGG | - | chr1_4:15866121-15866140 | None:intergenic | 35.0% | |
| TACCTTAACTGAAGTGAACT+TGG | + | chr1_4:15866270-15866289 | Msa0152870:CDS | 35.0% | |
| ACCTTAACTGAAGTGAACTT+GGG | + | chr1_4:15866271-15866290 | Msa0152870:CDS | 35.0% | |
| AATTCCAACCTCTACGATAA+AGG | + | chr1_4:15866300-15866319 | Msa0152870:CDS | 35.0% | |
| ! | TTTTCCTTTATCGTAGAGGT+TGG | - | chr1_4:15866307-15866326 | None:intergenic | 35.0% |
| ACCTCTACGATAAAGGAAAA+TGG | + | chr1_4:15866307-15866326 | Msa0152870:CDS | 35.0% | |
| CCTCTACGATAAAGGAAAAT+GGG | + | chr1_4:15866308-15866327 | Msa0152870:CDS | 35.0% | |
| ATCTCTCTCTAATCTCTCAT+TGG | - | chr1_4:15866483-15866502 | None:intergenic | 35.0% | |
| AATGAGAGATTAGAGAGAGA+TGG | + | chr1_4:15866482-15866501 | Msa0152870:exon | 35.0% | |
| AGAGATGGAAAGCTTATCAA+AGG | + | chr1_4:15866497-15866516 | Msa0152870:three_prime_UTR | 35.0% | |
| ! | GGGAAGGATGTATAACATTT+TGG | + | chr1_4:15866613-15866632 | Msa0152870:three_prime_UTR | 35.0% |
| AGAAGGAATGGAACTAACAA+AGG | - | chr1_4:15866656-15866675 | None:intergenic | 35.0% | |
| ! | AAAGGAAAGTGTGAAGATGG+TGG | - | chr1_4:15860615-15860634 | None:intergenic | 40.0% |
| ! | AGTTTTCATGGCAATGCCAA+TGG | + | chr1_4:15860820-15860839 | Msa0152870:exon | 40.0% |
| ! | GTTTTCATGGCAATGCCAAT+GGG | + | chr1_4:15860821-15860840 | Msa0152870:exon | 40.0% |
| AATGGGAAATGCAGTAACAC+CGG | + | chr1_4:15860838-15860857 | Msa0152870:CDS | 40.0% | |
| GCCGGAAAATGCTTAATTTC+CGG | - | chr1_4:15860860-15860879 | None:intergenic | 40.0% | |
| ! | GGAAATTAAGCATTTTCCGG+CGG | + | chr1_4:15860859-15860878 | Msa0152870:CDS | 40.0% |
| AGCAGCAACATCAACAACAA+TGG | + | chr1_4:15860927-15860946 | Msa0152870:CDS | 40.0% | |
| !! | TGGTTTGTTGATGAGAGAGA+TGG | + | chr1_4:15860947-15860966 | Msa0152870:CDS | 40.0% |
| !! | GGTTTGTTGATGAGAGAGAT+GGG | + | chr1_4:15860948-15860967 | Msa0152870:CDS | 40.0% |
| GGTGAGTATGATCATGTTGT+TGG | + | chr1_4:15861058-15861077 | Msa0152870:CDS | 40.0% | |
| ! | GCAGTATTTTTCCGTTAACG+AGG | + | chr1_4:15861129-15861148 | Msa0152870:CDS | 40.0% |
| GGTTGTTAAGGAGTTTAGGA+AGG | + | chr1_4:15861207-15861226 | Msa0152870:CDS | 40.0% | |
| TTAAGGAGTTTAGGAAGGGT+AGG | + | chr1_4:15861212-15861231 | Msa0152870:CDS | 40.0% | |
| AGTGTAGAAAATCATCGTCG+TGG | + | chr1_4:15861283-15861302 | Msa0152870:CDS | 40.0% | |
| AAAATCATCGTCGTGGTGAA+GGG | + | chr1_4:15861290-15861309 | Msa0152870:CDS | 40.0% | |
| GTTAAATCTGGTGGCAAAGT+TGG | + | chr1_4:15861358-15861377 | Msa0152870:CDS | 40.0% | |
| TGGTGGCAAAGTTGGATATA+AGG | + | chr1_4:15861366-15861385 | Msa0152870:CDS | 40.0% | |
| CGCCGCTATTTGAAAATACT+CGG | - | chr1_4:15861579-15861598 | None:intergenic | 40.0% | |
| AATCGCATATCGCGGAATAA+CGG | - | chr1_4:15861631-15861650 | None:intergenic | 40.0% | |
| TGTTGTCAAATAGCGGCTAT+AGG | + | chr1_4:15861660-15861679 | Msa0152870:intron | 40.0% | |
| !! | TTTTTAGCAGGCCAAAAGGT+CGG | - | chr1_4:15861969-15861988 | None:intergenic | 40.0% |
| !! | AAGAGCTCTGGAAATTCTCA+AGG | + | chr1_4:15862111-15862130 | Msa0152870:CDS | 40.0% |
| GAATGTGCATCAAATTCTGG+AGG | + | chr1_4:15862150-15862169 | Msa0152870:CDS | 40.0% | |
| AGCAAGTAATGTTCGGACTT+CGG | + | chr1_4:15862353-15862372 | Msa0152870:intron | 40.0% | |
| GTGACAAACACAGAAAGATG+AGG | - | chr1_4:15862387-15862406 | None:intergenic | 40.0% | |
| CATCTTTCTGTGTTTGTCAC+AGG | + | chr1_4:15862387-15862406 | Msa0152870:intron | 40.0% | |
| GTATGAAAGCTAGCAAGCAA+GGG | - | chr1_4:15862483-15862502 | None:intergenic | 40.0% | |
| TGTATGAAAGCTAGCAAGCA+AGG | - | chr1_4:15862484-15862503 | None:intergenic | 40.0% | |
| ACTCTCTTCCTATAAGCACA+TGG | - | chr1_4:15862507-15862526 | None:intergenic | 40.0% | |
| TAGGAAGAGAGTCACCTTAT+AGG | + | chr1_4:15862515-15862534 | Msa0152870:intron | 40.0% | |
| !! | ATGTAGTTTGCTGTGAAGAC+TGG | + | chr1_4:15862542-15862561 | Msa0152870:intron | 40.0% |
| AATCAACAACAGAACGTGAG+TGG | + | chr1_4:15862639-15862658 | Msa0152870:CDS | 40.0% | |
| TGAGATGTTTGATGGGAAGA+TGG | + | chr1_4:15862692-15862711 | Msa0152870:CDS | 40.0% | |
| ATGTTTGATGGGAAGATGGT+AGG | + | chr1_4:15862696-15862715 | Msa0152870:intron | 40.0% | |
| GTCAATGATTTAAGGGTTGC+TGG | + | chr1_4:15862916-15862935 | Msa0152870:CDS | 40.0% | |
| TTAAGGGTTGCTGGAAGAAA+AGG | + | chr1_4:15862925-15862944 | Msa0152870:CDS | 40.0% | |
| TATGCAATGGTCAATGTGTG+TGG | + | chr1_4:15863061-15863080 | Msa0152870:intron | 40.0% | |
| AGTTATCAAAGGGAGGTCTA+TGG | + | chr1_4:15863229-15863248 | Msa0152870:intron | 40.0% | |
| ACATTTGTGTATGCCAAGCA+GGG | + | chr1_4:15863295-15863314 | Msa0152870:intron | 40.0% | |
| !!! | ACACCGTGCCTCAATTTTTT+TGG | + | chr1_4:15863349-15863368 | Msa0152870:intron | 40.0% |
| !!! | CACCGTGCCTCAATTTTTTT+GGG | + | chr1_4:15863350-15863369 | Msa0152870:intron | 40.0% |
| !!! | ACCGTGCCTCAATTTTTTTG+GGG | + | chr1_4:15863351-15863370 | Msa0152870:intron | 40.0% |
| ATTGGGCCCCAAAAAAATTG+AGG | - | chr1_4:15863360-15863379 | None:intergenic | 40.0% | |
| CTTGACATGAGTTCAAGTAC+CGG | + | chr1_4:15863493-15863512 | Msa0152870:intron | 40.0% | |
| !! | TTTTTAGCACAAACGACGAC+AGG | - | chr1_4:15863589-15863608 | None:intergenic | 40.0% |
| GGGTACAAAAACAAAGGGTT+TGG | - | chr1_4:15863641-15863660 | None:intergenic | 40.0% | |
| GTTAACAAAAGGCCCATAAG+AGG | + | chr1_4:15863933-15863952 | Msa0152870:CDS | 40.0% | |
| TCTCTTCCATGTCCTCTTAT+GGG | - | chr1_4:15863948-15863967 | None:intergenic | 40.0% | |
| TGGAAGAGAGATGATTCAGT+TGG | + | chr1_4:15863959-15863978 | Msa0152870:CDS | 40.0% | |
| GGAAGAGAGATGATTCAGTT+GGG | + | chr1_4:15863960-15863979 | Msa0152870:CDS | 40.0% | |
| TCAAGATATCATTGAGCGCA+TGG | + | chr1_4:15864149-15864168 | Msa0152870:CDS | 40.0% | |
| ! | CTTAACAGACATGACTTGTG+AGG | - | chr1_4:15864178-15864197 | None:intergenic | 40.0% |
| ACCATTCAACGCCAAACATT+TGG | + | chr1_4:15864347-15864366 | Msa0152870:CDS | 40.0% | |
| AATGAAGACGGCCAAATGTT+TGG | - | chr1_4:15864361-15864380 | None:intergenic | 40.0% | |
| AACATTTGGCCGTCTTCATT+TGG | + | chr1_4:15864361-15864380 | Msa0152870:CDS | 40.0% | |
| ! | GTCAGGAAAAGCGTATAAAC+AGG | - | chr1_4:15864391-15864410 | None:intergenic | 40.0% |
| AAGTCATGTCACATTCAGTC+AGG | - | chr1_4:15864408-15864427 | None:intergenic | 40.0% | |
| ! | ACATTTGTCTCAGAGCACTT+TGG | + | chr1_4:15864436-15864455 | Msa0152870:CDS | 40.0% |
| ! | CATTTGTCTCAGAGCACTTT+GGG | + | chr1_4:15864437-15864456 | Msa0152870:CDS | 40.0% |
| ! | ATTTGTCTCAGAGCACTTTG+GGG | + | chr1_4:15864438-15864457 | Msa0152870:CDS | 40.0% |
| AGCAATGTCAAGCTTTCTCT+TGG | + | chr1_4:15864469-15864488 | Msa0152870:CDS | 40.0% | |
| ! | ATGGTGTTAGTTACGCTTAG+TGG | - | chr1_4:15864951-15864970 | None:intergenic | 40.0% |
| TTGAGTCCCTAGTATTAGGT+AGG | + | chr1_4:15865132-15865151 | Msa0152870:intron | 40.0% | |
| TGAGTCCCTAGTATTAGGTA+GGG | + | chr1_4:15865133-15865152 | Msa0152870:intron | 40.0% | |
| TGAAACACAAGGTCTCTTCA+TGG | - | chr1_4:15865303-15865322 | None:intergenic | 40.0% | |
| TTCGATCGTTACTCGATACT+AGG | + | chr1_4:15865575-15865594 | Msa0152870:intron | 40.0% | |
| TCATACCATTATGTTCGTGG+AGG | + | chr1_4:15865620-15865639 | Msa0152870:intron | 40.0% | |
| TTTCCCTTGCATCACTAGAA+GGG | - | chr1_4:15865804-15865823 | None:intergenic | 40.0% | |
| ATTTCCCTTGCATCACTAGA+AGG | - | chr1_4:15865805-15865824 | None:intergenic | 40.0% | |
| !!! | TCACTTGGCAGAGACTTTTT+TGG | - | chr1_4:15865902-15865921 | None:intergenic | 40.0% |
| ATTCGGAGATCTGTTTGATG+CGG | - | chr1_4:15865966-15865985 | None:intergenic | 40.0% | |
| GAATAATGCTTGGGAGCTAA+CGG | - | chr1_4:15866004-15866023 | None:intergenic | 40.0% | |
| ATTCTGCTGTTCAAGTAACC+GGG | + | chr1_4:15866020-15866039 | Msa0152870:CDS | 40.0% | |
| GCTATTAGGAGCAACATGTA+GGG | - | chr1_4:15866062-15866081 | None:intergenic | 40.0% | |
| TGCTATTAGGAGCAACATGT+AGG | - | chr1_4:15866063-15866082 | None:intergenic | 40.0% | |
| AACAATGGCTGCATGCTATT+AGG | - | chr1_4:15866076-15866095 | None:intergenic | 40.0% | |
| AATTGTATGGGAGTTGCAAC+TGG | - | chr1_4:15866109-15866128 | None:intergenic | 40.0% | |
| CACAGGTGTAGCAAATTGTA+TGG | - | chr1_4:15866122-15866141 | None:intergenic | 40.0% | |
| ACCCAAGTTCACTTCAGTTA+AGG | - | chr1_4:15866275-15866294 | None:intergenic | 40.0% | |
| ! | CCCATTTTCCTTTATCGTAG+AGG | - | chr1_4:15866311-15866330 | None:intergenic | 40.0% |
| ! | CAAGAATGCAATGGTAATGC+AGG | + | chr1_4:15866394-15866413 | Msa0152870:CDS | 40.0% |
| TGAAGTTGAACAGGCTATAG+AGG | + | chr1_4:15866423-15866442 | Msa0152870:CDS | 40.0% | |
| GAACAGGCTATAGAGGAAAA+AGG | + | chr1_4:15866430-15866449 | Msa0152870:CDS | 40.0% | |
| CAAAATGTAAAGAGCGGCAA+CGG | + | chr1_4:15866556-15866575 | Msa0152870:three_prime_UTR | 40.0% | |
| ATACTGCAAAGGAGAGAACA+AGG | + | chr1_4:15866592-15866611 | Msa0152870:three_prime_UTR | 40.0% | |
| TACTGCAAAGGAGAGAACAA+GGG | + | chr1_4:15866593-15866612 | Msa0152870:three_prime_UTR | 40.0% | |
| GGAATGGAACTAACAAAGGA+AGG | - | chr1_4:15866652-15866671 | None:intergenic | 40.0% | |
| !! | GGTGTTACTGCATTTCCCAT+TGG | - | chr1_4:15860839-15860858 | None:intergenic | 45.0% |
| ! | AATTAAGCATTTTCCGGCGG+TGG | + | chr1_4:15860862-15860881 | Msa0152870:CDS | 45.0% |
| TTGGATTCGTAGCGAATTCG+CGG | + | chr1_4:15860979-15860998 | Msa0152870:CDS | 45.0% | |
| !! | TTAGGTGTTATTGGGGAGAG+TGG | + | chr1_4:15861037-15861056 | Msa0152870:CDS | 45.0% |
| TTGTTGGTGCAATTCAGCAG+AGG | + | chr1_4:15861074-15861093 | Msa0152870:CDS | 45.0% | |
| TTCAGCAGAGGAGGGTTAAT+TGG | + | chr1_4:15861086-15861105 | Msa0152870:CDS | 45.0% | |
| GTTTGTGAAGCCGGTTGTTA+AGG | + | chr1_4:15861195-15861214 | Msa0152870:CDS | 45.0% | |
| AGCCGGTTGTTAAGGAGTTT+AGG | + | chr1_4:15861203-15861222 | Msa0152870:CDS | 45.0% | |
| AGTTTAGGAAGGGTAGGCAA+TGG | + | chr1_4:15861218-15861237 | Msa0152870:CDS | 45.0% | |
| GAAAATCATCGTCGTGGTGA+AGG | + | chr1_4:15861289-15861308 | Msa0152870:CDS | 45.0% | |
| ! | TCGTGGTGAAGGGAATTTTG+TGG | + | chr1_4:15861300-15861319 | Msa0152870:CDS | 45.0% |
| ACTGTGTGACCCTAACATTG+TGG | - | chr1_4:15861514-15861533 | None:intergenic | 45.0% | |
| GGCTATAGGCTGTGAAATTG+CGG | + | chr1_4:15861674-15861693 | Msa0152870:intron | 45.0% | |
| TGCAATTCGGAGACCATTGT+AGG | + | chr1_4:15861864-15861883 | Msa0152870:intron | 45.0% | |
| ! | ATACACGACTTCCGACCTTT+TGG | + | chr1_4:15861955-15861974 | Msa0152870:intron | 45.0% |
| GTGTGTGGCAAACACTTGAT+AGG | + | chr1_4:15863076-15863095 | Msa0152870:intron | 45.0% | |
| GACATTTGTGTATGCCAAGC+AGG | + | chr1_4:15863294-15863313 | Msa0152870:intron | 45.0% | |
| GCCCCAAAAAAATTGAGGCA+CGG | - | chr1_4:15863355-15863374 | None:intergenic | 45.0% | |
| ! | CAGTGTCGGAGTGAAATCAT+AGG | + | chr1_4:15863430-15863449 | Msa0152870:intron | 45.0% |
| GAGTGAAATCATAGGATGCG+TGG | + | chr1_4:15863438-15863457 | Msa0152870:intron | 45.0% | |
| TGAAATCATAGGATGCGTGG+TGG | + | chr1_4:15863441-15863460 | Msa0152870:intron | 45.0% | |
| AAACGACGACAGGCCTATAT+GGG | - | chr1_4:15863579-15863598 | None:intergenic | 45.0% | |
| AAAAGGCCCATAAGAGGACA+TGG | + | chr1_4:15863939-15863958 | Msa0152870:CDS | 45.0% | |
| CTCTCTTCCATGTCCTCTTA+TGG | - | chr1_4:15863949-15863968 | None:intergenic | 45.0% | |
| ACATTGTCCACGTCAGCAAT+TGG | - | chr1_4:15863990-15864009 | None:intergenic | 45.0% | |
| AATGTGACAGCGTCGTTCAA+AGG | + | chr1_4:15864005-15864024 | Msa0152870:CDS | 45.0% | |
| AAATCGACGATGCAAGCATC+AGG | - | chr1_4:15864201-15864220 | None:intergenic | 45.0% | |
| GGGTGAGTACATGGGAAATT+TGG | + | chr1_4:15864266-15864285 | Msa0152870:intron | 45.0% | |
| ! | GCCAAATGTTTGGCGTTGAA+TGG | - | chr1_4:15864351-15864370 | None:intergenic | 45.0% |
| TTTGGCCGTCTTCATTTGGA+AGG | + | chr1_4:15864365-15864384 | Msa0152870:CDS | 45.0% | |
| ACAGGCCTTCCAAATGAAGA+CGG | - | chr1_4:15864373-15864392 | None:intergenic | 45.0% | |
| TCAAGCTTTCTCTTGGACCT+GGG | + | chr1_4:15864476-15864495 | Msa0152870:CDS | 45.0% | |
| CGTTGAACACCAGAAAGTCA+TGG | - | chr1_4:15864710-15864729 | None:intergenic | 45.0% | |
| TTCGGAGATCTGTTTGATGC+GGG | - | chr1_4:15865965-15865984 | None:intergenic | 45.0% | |
| TTCTGCTGTTCAAGTAACCG+GGG | + | chr1_4:15866021-15866040 | Msa0152870:CDS | 45.0% | |
| TTAGGAGCAACATGTAGGGA+TGG | - | chr1_4:15866058-15866077 | None:intergenic | 45.0% | |
| ACTGAAGTGAACTTGGGTGT+TGG | + | chr1_4:15866277-15866296 | Msa0152870:CDS | 45.0% | |
| AGGTGCAACTGAAGTTGAAC+AGG | + | chr1_4:15866414-15866433 | Msa0152870:CDS | 45.0% | |
| !!! | ATCTTTTATATTTTATTTTA+TGG | + | chr1_4:15862796-15862815 | Msa0152870:intron | 5.0% |
| !!! | TCTTTTATATTTTATTTTAT+GGG | + | chr1_4:15862797-15862816 | Msa0152870:intron | 5.0% |
| !! | ATTGAAAAAAAAAAAAAATT+GGG | - | chr1_4:15863377-15863396 | None:intergenic | 5.0% |
| !! | TATTGAAAAAAAAAAAAAAT+TGG | - | chr1_4:15863378-15863397 | None:intergenic | 5.0% |
| TGGTCTGTACTGCATCTCAC+CGG | - | chr1_4:15860894-15860913 | None:intergenic | 50.0% | |
| TGATGTTGCTGCTGTTGCTG+TGG | - | chr1_4:15860920-15860939 | None:intergenic | 50.0% | |
| TTGGTGCAATTCAGCAGAGG+AGG | + | chr1_4:15861077-15861096 | Msa0152870:CDS | 50.0% | |
| TGGTGCAATTCAGCAGAGGA+GGG | + | chr1_4:15861078-15861097 | Msa0152870:CDS | 50.0% | |
| TAGGCAATGGCAGAGGTTTG+AGG | + | chr1_4:15861231-15861250 | Msa0152870:CDS | 50.0% | |
| AGGCAATGGCAGAGGTTTGA+GGG | + | chr1_4:15861232-15861251 | Msa0152870:CDS | 50.0% | |
| AATGGCAGAGGTTTGAGGGT+GGG | + | chr1_4:15861236-15861255 | Msa0152870:CDS | 50.0% | |
| GTTTGAGGGTGGGAATGGTA+AGG | + | chr1_4:15861246-15861265 | Msa0152870:CDS | 50.0% | |
| AGGGTGGGAATGGTAAGGAA+GGG | + | chr1_4:15861251-15861270 | Msa0152870:CDS | 50.0% | |
| GACACTGCTGAGGAGAAGAA+AGG | + | chr1_4:15861403-15861422 | Msa0152870:CDS | 50.0% | |
| TGCAGTCAAGTGGCCTACAA+TGG | - | chr1_4:15861880-15861899 | None:intergenic | 50.0% | |
| !! | GATGGCCTTTTGAAGAGCTC+TGG | + | chr1_4:15862099-15862118 | Msa0152870:CDS | 50.0% |
| !! | ACATGAGTTCAAGTACCGGC+AGG | + | chr1_4:15863497-15863516 | Msa0152870:intron | 50.0% |
| CAAACGACGACAGGCCTATA+TGG | - | chr1_4:15863580-15863599 | None:intergenic | 50.0% | |
| AACAGGGAGTCCGACATATG+TGG | + | chr1_4:15863911-15863930 | Msa0152870:intron | 50.0% | |
| TTTGGAAGGGGGTGAGTACA+TGG | + | chr1_4:15864257-15864276 | Msa0152870:intron | 50.0% | |
| TTGGAAGGGGGTGAGTACAT+GGG | + | chr1_4:15864258-15864277 | Msa0152870:intron | 50.0% | |
| GTCAAGCTTTCTCTTGGACC+TGG | + | chr1_4:15864475-15864494 | Msa0152870:CDS | 50.0% | |
| CAAGGTCTCTTCATGGTGCA+TGG | - | chr1_4:15865296-15865315 | None:intergenic | 50.0% | |
| AGGTCCCTTCTAGTGATGCA+AGG | + | chr1_4:15865797-15865816 | Msa0152870:intron | 50.0% | |
| GGTCCCTTCTAGTGATGCAA+GGG | + | chr1_4:15865798-15865817 | Msa0152870:intron | 50.0% | |
| TCTCTGCCAAGTGATGCTCA+AGG | + | chr1_4:15865908-15865927 | Msa0152870:CDS | 50.0% | |
| GCAAGACCTTGAGCATCACT+TGG | - | chr1_4:15865917-15865936 | None:intergenic | 50.0% | |
| CTCCGTCAGCAACTTCACAT+CGG | + | chr1_4:15865936-15865955 | Msa0152870:CDS | 50.0% | |
| GACCGATGTGAAGTTGCTGA+CGG | - | chr1_4:15865941-15865960 | None:intergenic | 50.0% | |
| TGAGATGAGTTAGCAGAGCC+AGG | - | chr1_4:15866238-15866257 | None:intergenic | 50.0% | |
| AACTCATCTCAGCACTCGCA+AGG | + | chr1_4:15866247-15866266 | Msa0152870:CDS | 50.0% | |
| AATGTAAAGAGCGGCAACGG+TGG | + | chr1_4:15866559-15866578 | Msa0152870:three_prime_UTR | 50.0% | |
| GCAAAGGAGAGAACAAGGGA+AGG | + | chr1_4:15866597-15866616 | Msa0152870:three_prime_UTR | 50.0% | |
| TCTGTACTGCATCTCACCGG+CGG | - | chr1_4:15860891-15860910 | None:intergenic | 55.0% | |
| TGTTGCTGCTGTTGCTGTGG+TGG | - | chr1_4:15860917-15860936 | None:intergenic | 55.0% | |
| CGCGTACGCAACCTCGTTAA+CGG | - | chr1_4:15861143-15861162 | None:intergenic | 55.0% | |
| GCAGCAGAGGTTTGTGAAGC+CGG | + | chr1_4:15861186-15861205 | Msa0152870:CDS | 55.0% | |
| CAATGGCAGAGGTTTGAGGG+TGG | + | chr1_4:15861235-15861254 | Msa0152870:CDS | 55.0% | |
| CAGAGGTTTGAGGGTGGGAA+TGG | + | chr1_4:15861241-15861260 | Msa0152870:CDS | 55.0% | |
| GAGGGTGGGAATGGTAAGGA+AGG | + | chr1_4:15861250-15861269 | Msa0152870:CDS | 55.0% | |
| AACGTGAGTGGTTCCACCAC+AGG | + | chr1_4:15862651-15862670 | Msa0152870:CDS | 55.0% | |
| TTGTGTATGCCAAGCAGGGC+CGG | + | chr1_4:15863299-15863318 | Msa0152870:intron | 55.0% | |
| TGTTATAGCCCAGCCTCGAC+GGG | - | chr1_4:15863332-15863351 | None:intergenic | 55.0% | |
| GTGTTATAGCCCAGCCTCGA+CGG | - | chr1_4:15863333-15863352 | None:intergenic | 55.0% | |
| ATAGGATGCGTGGTGGTCAG+TGG | + | chr1_4:15863448-15863467 | Msa0152870:intron | 55.0% | |
| GGGTGTTCCAATTGCTGACG+TGG | + | chr1_4:15863980-15863999 | Msa0152870:CDS | 55.0% | |
| TGACAGCGTCGTTCAAAGGC+AGG | + | chr1_4:15864009-15864028 | Msa0152870:intron | 55.0% | |
| GCAACATGTAGGGATGGAGC+CGG | - | chr1_4:15866052-15866071 | None:intergenic | 55.0% | |
| ! | ACTGGCGCTGGGACAAACAA+TGG | - | chr1_4:15866091-15866110 | None:intergenic | 55.0% |
| ACAGTCCATCCTGTAGAGCC+AGG | - | chr1_4:15866154-15866173 | None:intergenic | 55.0% | |
| !! | TGGCTCTACAGGATGGACTG+TGG | + | chr1_4:15866153-15866172 | Msa0152870:CDS | 55.0% |
| GATGAGTTAGCAGAGCCAGG+CGG | - | chr1_4:15866235-15866254 | None:intergenic | 55.0% | |
| TGCTGCTGTTGCTGTGGTGG+TGG | - | chr1_4:15860914-15860933 | None:intergenic | 60.0% | |
| GGAAGGGTAGGCAATGGCAG+AGG | + | chr1_4:15861224-15861243 | Msa0152870:CDS | 60.0% | |
| !! | TCAAGTAACCGGGGTGCTGC+CGG | + | chr1_4:15866030-15866049 | Msa0152870:CDS | 60.0% |
| TGGGAGTTGCAACTGGCGCT+GGG | - | chr1_4:15866102-15866121 | None:intergenic | 60.0% | |
| ATGGGAGTTGCAACTGGCGC+TGG | - | chr1_4:15866103-15866122 | None:intergenic | 60.0% | |
| TCCATCCTGTAGAGCCAGGC+GGG | - | chr1_4:15866150-15866169 | None:intergenic | 60.0% | |
| GTCCATCCTGTAGAGCCAGG+CGG | - | chr1_4:15866151-15866170 | None:intergenic | 60.0% | |
| !! | GATGGACTGTGGCTCCTCCA+AGG | + | chr1_4:15866164-15866183 | Msa0152870:CDS | 60.0% |
| ACTCGAGGAGGAGGATGCCT+TGG | - | chr1_4:15866184-15866203 | None:intergenic | 60.0% | |
| GGAACAACGACTCGAGGAGG+AGG | - | chr1_4:15866193-15866212 | None:intergenic | 60.0% | |
| CCTCCTCGAGTCGTTGTTCC+CGG | + | chr1_4:15866193-15866212 | Msa0152870:CDS | 60.0% | |
| GGAAGGAAGACTCCTGTGCC+GGG | - | chr1_4:15866214-15866233 | None:intergenic | 60.0% | |
| CGGAAGGAAGACTCCTGTGC+CGG | - | chr1_4:15866215-15866234 | None:intergenic | 60.0% | |
| ACAGGAGTCTTCCTTCCGCC+TGG | + | chr1_4:15866217-15866236 | Msa0152870:CDS | 60.0% | |
| AGTTAGCAGAGCCAGGCGGA+AGG | - | chr1_4:15866231-15866250 | None:intergenic | 60.0% | |
| TTTCCGGCGGTGGTTACCGC+CGG | + | chr1_4:15860872-15860891 | Msa0152870:CDS | 65.0% | |
| GGTTGCGTACGCGTTGCAGC+AGG | + | chr1_4:15861150-15861169 | Msa0152870:CDS | 65.0% | |
| TGCGTACGCGTTGCAGCAGG+TGG | + | chr1_4:15861153-15861172 | Msa0152870:CDS | 65.0% | |
| ACACCTGTGCCAATCCCGCC+TGG | + | chr1_4:15866133-15866152 | Msa0152870:CDS | 65.0% | |
| CCTGTAGAGCCAGGCGGGAT+TGG | - | chr1_4:15866145-15866164 | None:intergenic | 65.0% | |
| !! | CCAATCCCGCCTGGCTCTAC+AGG | + | chr1_4:15866142-15866161 | Msa0152870:CDS | 65.0% |
| !! | TCCCGCCTGGCTCTACAGGA+TGG | + | chr1_4:15866146-15866165 | Msa0152870:CDS | 65.0% |
| CGAGGAGGAGGATGCCTTGG+AGG | - | chr1_4:15866181-15866200 | None:intergenic | 65.0% | |
| CCGGGAACAACGACTCGAGG+AGG | - | chr1_4:15866196-15866215 | None:intergenic | 65.0% | |
| GTGCCGGGAACAACGACTCG+AGG | - | chr1_4:15866199-15866218 | None:intergenic | 65.0% | |
| CGAGTCGTTGTTCCCGGCAC+AGG | + | chr1_4:15866199-15866218 | Msa0152870:CDS | 65.0% | |
| TCACCGGCGGTAACCACCGC+CGG | - | chr1_4:15860878-15860897 | None:intergenic | 70.0% | |
| ACGCGTTGCAGCAGGTGGCG+TGG | + | chr1_4:15861158-15861177 | Msa0152870:CDS | 70.0% | |
| CGTTGCAGCAGGTGGCGTGG+AGG | + | chr1_4:15861161-15861180 | Msa0152870:CDS | 70.0% | |
| TGCAGCAGGTGGCGTGGAGG+CGG | + | chr1_4:15861164-15861183 | Msa0152870:CDS | 70.0% | |
| !! | AGCCTCGACGGGCTATGGGC+CGG | - | chr1_4:15863321-15863340 | None:intergenic | 70.0% |
| GCCCATAGCCCGTCGAGGCT+GGG | + | chr1_4:15863321-15863340 | Msa0152870:intron | 70.0% | |
| !! | GCCCAGCCTCGACGGGCTAT+GGG | - | chr1_4:15863325-15863344 | None:intergenic | 70.0% |
| !! | AGCCCAGCCTCGACGGGCTA+TGG | - | chr1_4:15863326-15863345 | None:intergenic | 70.0% |
| ! | GAGCCAGGCGGGATTGGCAC+AGG | - | chr1_4:15866139-15866158 | None:intergenic | 70.0% |
| TGGCGTGGAGGCGGCAGCAG+AGG | + | chr1_4:15861173-15861192 | Msa0152870:CDS | 75.0% | |
| GGCTATGGGCCGGCCCTGCT+TGG | - | chr1_4:15863311-15863330 | None:intergenic | 75.0% | |
| GGCCCATAGCCCGTCGAGGC+TGG | + | chr1_4:15863320-15863339 | Msa0152870:intron | 75.0% | |
| GGATGGAGCCGGCAGCACCC+CGG | - | chr1_4:15866041-15866060 | None:intergenic | 75.0% | |
| ! | GGCCGGCCCATAGCCCGTCG+AGG | + | chr1_4:15863316-15863335 | Msa0152870:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 15860583 | 15866758 | 15860583 | ID=Msa0152870;Name=Msa0152870 |
| chr1_4 | mRNA | 15860583 | 15866758 | 15860583 | ID=Msa0152870-mRNA-1;Parent=Msa0152870;Name=Msa0152870-mRNA-1;_AED=0.30;_eAED=0.30;_QI=244|1|1|1|1|1|8|272|658 |
| chr1_4 | exon | 15860583 | 15861424 | 15860583 | ID=Msa0152870-mRNA-1:exon:6115;Parent=Msa0152870-mRNA-1 |
| chr1_4 | exon | 15862076 | 15862171 | 15862076 | ID=Msa0152870-mRNA-1:exon:6116;Parent=Msa0152870-mRNA-1 |
| chr1_4 | exon | 15862616 | 15862713 | 15862616 | ID=Msa0152870-mRNA-1:exon:6117;Parent=Msa0152870-mRNA-1 |
| chr1_4 | exon | 15862841 | 15862958 | 15862841 | ID=Msa0152870-mRNA-1:exon:6118;Parent=Msa0152870-mRNA-1 |
| chr1_4 | exon | 15863916 | 15864026 | 15863916 | ID=Msa0152870-mRNA-1:exon:6119;Parent=Msa0152870-mRNA-1 |
| chr1_4 | exon | 15864118 | 15864230 | 15864118 | ID=Msa0152870-mRNA-1:exon:6120;Parent=Msa0152870-mRNA-1 |
| chr1_4 | exon | 15864343 | 15864497 | 15864343 | ID=Msa0152870-mRNA-1:exon:6121;Parent=Msa0152870-mRNA-1 |
| chr1_4 | exon | 15865799 | 15866758 | 15865799 | ID=Msa0152870-mRNA-1:exon:6122;Parent=Msa0152870-mRNA-1 |
| chr1_4 | five_prime_UTR | 15860583 | 15860826 | 15860583 | ID=Msa0152870-mRNA-1:five_prime_utr;Parent=Msa0152870-mRNA-1 |
| chr1_4 | CDS | 15860827 | 15861424 | 15860827 | ID=Msa0152870-mRNA-1:cds;Parent=Msa0152870-mRNA-1 |
| chr1_4 | CDS | 15862076 | 15862171 | 15862076 | ID=Msa0152870-mRNA-1:cds;Parent=Msa0152870-mRNA-1 |
| chr1_4 | CDS | 15862616 | 15862713 | 15862616 | ID=Msa0152870-mRNA-1:cds;Parent=Msa0152870-mRNA-1 |
| chr1_4 | CDS | 15862841 | 15862958 | 15862841 | ID=Msa0152870-mRNA-1:cds;Parent=Msa0152870-mRNA-1 |
| chr1_4 | CDS | 15863916 | 15864026 | 15863916 | ID=Msa0152870-mRNA-1:cds;Parent=Msa0152870-mRNA-1 |
| chr1_4 | CDS | 15864118 | 15864230 | 15864118 | ID=Msa0152870-mRNA-1:cds;Parent=Msa0152870-mRNA-1 |
| chr1_4 | CDS | 15864343 | 15864497 | 15864343 | ID=Msa0152870-mRNA-1:cds;Parent=Msa0152870-mRNA-1 |
| chr1_4 | CDS | 15865799 | 15866486 | 15865799 | ID=Msa0152870-mRNA-1:cds;Parent=Msa0152870-mRNA-1 |
| chr1_4 | three_prime_UTR | 15866487 | 15866758 | 15866487 | ID=Msa0152870-mRNA-1:three_prime_utr;Parent=Msa0152870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
