Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0022970 | sp|O65731|RS5_CICAR | 94.388 | 196 | 10 | 1 | 45 | 239 | 2 | 197 | 3.47e-133 | 376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000100 | Msa0022970 | 0.820393 | 7.025415e-53 | -8.615850e-47 |
| Msa0002750 | Msa0022970 | 0.871108 | 8.781222e-67 | -8.615850e-47 |
| Msa0002790 | Msa0022970 | 0.900060 | 1.068926e-77 | -8.615850e-47 |
| Msa0003780 | Msa0022970 | 0.835389 | 1.726556e-56 | -8.615850e-47 |
| Msa0007850 | Msa0022970 | 0.816548 | 5.226428e-52 | -8.615850e-47 |
| Msa0019390 | Msa0022970 | 0.853878 | 1.785976e-61 | -8.615850e-47 |
| Msa0022970 | Msa0027260 | 0.835587 | 1.538799e-56 | -8.615850e-47 |
| Msa0022970 | Msa0032090 | 0.807720 | 4.402976e-50 | -8.615850e-47 |
| Msa0022970 | Msa0032810 | 0.806938 | 6.450908e-50 | -8.615850e-47 |
| Msa0022970 | Msa0040690 | 0.851918 | 6.488465e-61 | -8.615850e-47 |
| Msa0022970 | Msa0042280 | 0.857006 | 2.189135e-62 | -8.615850e-47 |
| Msa0022970 | Msa0043660 | 0.832766 | 7.838534e-56 | -8.615850e-47 |
| Msa0022970 | Msa0045730 | 0.877915 | 4.284787e-69 | -8.615850e-47 |
| Msa0022970 | Msa0046830 | 0.825968 | 3.508997e-54 | -8.615850e-47 |
| Msa0022970 | Msa0047160 | 0.867719 | 1.112042e-65 | -8.615850e-47 |
| Msa0022970 | Msa0048180 | 0.867101 | 1.753962e-65 | -8.615850e-47 |
| Msa0022970 | Msa0052610 | 0.837907 | 3.940628e-57 | -8.615850e-47 |
| Msa0022970 | Msa0066740 | 0.806148 | 9.470561e-50 | -8.615850e-47 |
| Msa0022970 | Msa0074030 | 0.865019 | 7.998032e-65 | -8.615850e-47 |
| Msa0022970 | Msa0074320 | 0.824389 | 8.289033e-54 | -8.615850e-47 |
| Msa0022970 | Msa0077530 | 0.844297 | 8.248763e-59 | -8.615850e-47 |
| Msa0022970 | Msa0079820 | 0.851924 | 6.465413e-61 | -8.615850e-47 |
| Msa0022970 | Msa0086750 | 0.833160 | 6.256195e-56 | -8.615850e-47 |
| Msa0022970 | Msa0091880 | 0.857047 | 2.130042e-62 | -8.615850e-47 |
| Msa0022970 | Msa0094470 | 0.847094 | 1.436703e-59 | -8.615850e-47 |
| Msa0022970 | Msa0097580 | 0.806282 | 8.874245e-50 | -8.615850e-47 |
| Msa0022970 | Msa0097600 | 0.843273 | 1.550548e-58 | -8.615850e-47 |
| Msa0022970 | Msa0115130 | 0.813737 | 2.199937e-51 | -8.615850e-47 |
| Msa0022970 | Msa0116130 | 0.891577 | 3.498225e-74 | -8.615850e-47 |
| Msa0022970 | Msa0116670 | 0.898349 | 5.787514e-77 | -8.615850e-47 |
| Msa0022970 | Msa0118710 | 0.938115 | 1.145160e-98 | -8.615850e-47 |
| Msa0022970 | Msa0127390 | 0.827210 | 1.774329e-54 | -8.615850e-47 |
| Msa0022970 | Msa0128860 | 0.837256 | 5.785306e-57 | -8.615850e-47 |
| Msa0022970 | Msa0129660 | 0.805054 | 1.606456e-49 | -8.615850e-47 |
| Msa0022970 | Msa0133540 | 0.886227 | 4.108746e-72 | -8.615850e-47 |
| Msa0022970 | Msa0137550 | 0.816289 | 5.972453e-52 | -8.615850e-47 |
| Msa0022970 | Msa0146340 | 0.845156 | 4.840917e-59 | -8.615850e-47 |
| Msa0022970 | Msa0146770 | 0.813433 | 2.566234e-51 | -8.615850e-47 |
| Msa0022970 | Msa0163760 | 0.829478 | 5.032682e-55 | -8.615850e-47 |
| Msa0022970 | Msa0167480 | 0.862693 | 4.230587e-64 | -8.615850e-47 |
| Msa0022970 | Msa0172970 | 0.806250 | 9.013087e-50 | -8.615850e-47 |
| Msa0022970 | Msa0173530 | 0.897141 | 1.873637e-76 | -8.615850e-47 |
| Msa0022970 | Msa0174730 | 0.834946 | 2.233773e-56 | -8.615850e-47 |
| Msa0022970 | Msa0180020 | 0.811940 | 5.445621e-51 | -8.615850e-47 |
| Msa0022970 | Msa0181490 | 0.871642 | 5.847676e-67 | -8.615850e-47 |
| Msa0022970 | Msa0187690 | 0.823626 | 1.251966e-53 | -8.615850e-47 |
| Msa0022970 | Msa0187930 | 0.860538 | 1.926079e-63 | -8.615850e-47 |
| Msa0022970 | Msa0188350 | 0.812044 | 5.167892e-51 | -8.615850e-47 |
| Msa0022970 | Msa0189300 | 0.844415 | 7.666939e-59 | -8.615850e-47 |
| Msa0022970 | Msa0192230 | 0.839743 | 1.320150e-57 | -8.615850e-47 |
| Msa0022970 | Msa0194540 | 0.858115 | 1.028180e-62 | -8.615850e-47 |
| Msa0022970 | Msa0202020 | 0.875695 | 2.515048e-68 | -8.615850e-47 |
| Msa0022970 | Msa0210360 | 0.829507 | 4.951758e-55 | -8.615850e-47 |
| Msa0022970 | Msa0218720 | 0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0022970 | Msa0218830 | 0.905711 | 3.216518e-80 | -8.615850e-47 |
| Msa0022970 | Msa0219120 | 0.828653 | 7.975055e-55 | -8.615850e-47 |
| Msa0022970 | Msa0221030 | 0.887912 | 9.400354e-73 | -8.615850e-47 |
| Msa0022970 | Msa0222730 | 0.801586 | 8.394872e-49 | -8.615850e-47 |
| Msa0022970 | Msa0230490 | 0.840029 | 1.112088e-57 | -8.615850e-47 |
| Msa0022970 | Msa0230520 | 0.804412 | 2.187676e-49 | -8.615850e-47 |
| Msa0022970 | Msa0231100 | 0.871253 | 7.865785e-67 | -8.615850e-47 |
| Msa0022970 | Msa0231660 | 0.863657 | 2.129636e-64 | -8.615850e-47 |
| Msa0022970 | Msa0244780 | 0.863342 | 2.666781e-64 | -8.615850e-47 |
| Msa0022970 | Msa0258850 | 0.818603 | 1.798426e-52 | -8.615850e-47 |
| Msa0022970 | Msa0262310 | 0.810929 | 9.027711e-51 | -8.615850e-47 |
| Msa0022970 | Msa0262480 | 0.874116 | 8.682465e-68 | -8.615850e-47 |
| Msa0022970 | Msa0264010 | 0.864984 | 8.204467e-65 | -8.615850e-47 |
| Msa0022970 | Msa0266370 | 0.807531 | 4.830098e-50 | -8.615850e-47 |
| Msa0022970 | Msa0268130 | 0.849101 | 4.013397e-60 | -8.615850e-47 |
| Msa0022970 | Msa0269180 | 0.835257 | 1.864586e-56 | -8.615850e-47 |
| Msa0022970 | Msa0289580 | 0.877694 | 5.116056e-69 | -8.615850e-47 |
| Msa0022970 | Msa0289610 | 0.889963 | 1.512735e-73 | -8.615850e-47 |
| Msa0022970 | Msa0296250 | 0.815613 | 8.451504e-52 | -8.615850e-47 |
| Msa0022970 | Msa0297830 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa0022970 | Msa0298140 | 0.840444 | 8.661562e-58 | -8.615850e-47 |
| Msa0022970 | Msa0298200 | 0.824888 | 6.324454e-54 | -8.615850e-47 |
| Msa0022970 | Msa0298990 | 0.851404 | 9.074993e-61 | -8.615850e-47 |
| Msa0022970 | Msa0300350 | 0.898316 | 5.975973e-77 | -8.615850e-47 |
| Msa0022970 | Msa0306690 | 0.880310 | 6.098791e-70 | -8.615850e-47 |
| Msa0022970 | Msa0313100 | 0.854908 | 8.995896e-62 | -8.615850e-47 |
| Msa0022970 | Msa0321640 | 0.815137 | 1.078338e-51 | -8.615850e-47 |
| Msa0022970 | Msa0327300 | 0.921902 | 1.968118e-88 | -8.615850e-47 |
| Msa0022970 | Msa0327330 | 0.876509 | 1.319689e-68 | -8.615850e-47 |
| Msa0022970 | Msa0336010 | 0.801948 | 7.076511e-49 | -8.615850e-47 |
| Msa0022970 | Msa0337650 | 0.815180 | 1.055230e-51 | -8.615850e-47 |
| Msa0022970 | Msa0348830 | 0.852781 | 3.685512e-61 | -8.615850e-47 |
| Msa0022970 | Msa0357900 | 0.815852 | 7.474790e-52 | -8.615850e-47 |
| Msa0022970 | Msa0435370 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa0022970 | Msa0443390 | 0.878387 | 2.926936e-69 | -8.615850e-47 |
| Msa0022970 | Msa0458060 | 0.825160 | 5.454835e-54 | -8.615850e-47 |
| Msa0022970 | Msa0483110 | 0.862937 | 3.556661e-64 | -8.615850e-47 |
| Msa0022970 | Msa0517050 | 0.802227 | 6.199988e-49 | -8.615850e-47 |
| Msa0022970 | Msa0526540 | 0.897872 | 9.223277e-77 | -8.615850e-47 |
| Msa0022970 | Msa0527150 | 0.835737 | 1.409499e-56 | -8.615850e-47 |
| Msa0022970 | Msa0531650 | 0.814055 | 1.871912e-51 | -8.615850e-47 |
| Msa0022970 | Msa0534750 | 0.821821 | 3.293257e-53 | -8.615850e-47 |
| Msa0022970 | Msa0550540 | 0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa0022970 | Msa0554290 | 0.851504 | 8.503722e-61 | -8.615850e-47 |
| Msa0022970 | Msa0561430 | 0.803812 | 2.915149e-49 | -8.615850e-47 |
| Msa0022970 | Msa0571920 | 0.860359 | 2.182459e-63 | -8.615850e-47 |
| Msa0022970 | Msa0576940 | 0.892104 | 2.159370e-74 | -8.615850e-47 |
| Msa0022970 | Msa0581280 | 0.824939 | 6.149158e-54 | -8.615850e-47 |
| Msa0022970 | Msa0586420 | 0.802816 | 4.687483e-49 | -8.615850e-47 |
| Msa0022970 | Msa0588360 | 0.828540 | 8.494191e-55 | -8.615850e-47 |
| Msa0022970 | Msa0593700 | 0.801969 | 7.005185e-49 | -8.615850e-47 |
| Msa0022970 | Msa0603320 | 0.880729 | 4.319271e-70 | -8.615850e-47 |
| Msa0022970 | Msa0605000 | 0.801261 | 9.785459e-49 | -8.615850e-47 |
| Msa0022970 | Msa0609000 | 0.816524 | 5.291328e-52 | -8.615850e-47 |
| Msa0022970 | Msa0612390 | 0.823550 | 1.303972e-53 | -8.615850e-47 |
| Msa0022970 | Msa0615440 | 0.855316 | 6.846041e-62 | -8.615850e-47 |
| Msa0022970 | Msa0615580 | 0.858229 | 9.506251e-63 | -8.615850e-47 |
| Msa0022970 | Msa0618930 | 0.813097 | 3.040471e-51 | -8.615850e-47 |
| Msa0022970 | Msa0621950 | 0.829167 | 5.988532e-55 | -8.615850e-47 |
| Msa0022970 | Msa0622750 | 0.850329 | 1.822370e-60 | -8.615850e-47 |
| Msa0022970 | Msa0623200 | 0.892270 | 1.853262e-74 | -8.615850e-47 |
| Msa0022970 | Msa0648780 | 0.820991 | 5.119095e-53 | -8.615850e-47 |
| Msa0022970 | Msa0654870 | 0.826620 | 2.455433e-54 | -8.615850e-47 |
| Msa0022970 | Msa0666230 | 0.872722 | 2.556610e-67 | -8.615850e-47 |
| Msa0022970 | Msa0688850 | 0.800707 | 1.270280e-48 | -8.615850e-47 |
| Msa0022970 | Msa0698490 | 0.852335 | 4.939004e-61 | -8.615850e-47 |
| Msa0022970 | Msa0698660 | 0.853622 | 2.115596e-61 | -8.615850e-47 |
| Msa0022970 | Msa0706500 | 0.804583 | 2.015213e-49 | -8.615850e-47 |
| Msa0022970 | Msa0709730 | 0.844838 | 5.898615e-59 | -8.615850e-47 |
| Msa0022970 | Msa0709780 | 0.802787 | 4.753931e-49 | -8.615850e-47 |
| Msa0022970 | Msa0712610 | 0.811828 | 5.758161e-51 | -8.615850e-47 |
| Msa0022970 | Msa0715650 | 0.803153 | 3.992809e-49 | -8.615850e-47 |
| Msa0022970 | Msa0719420 | 0.893180 | 7.992933e-75 | -8.615850e-47 |
| Msa0022970 | Msa0729200 | 0.866592 | 2.547408e-65 | -8.615850e-47 |
| Msa0022970 | Msa0738100 | 0.886167 | 4.330130e-72 | -8.615850e-47 |
| Msa0022970 | Msa0750920 | 0.820968 | 5.181071e-53 | -8.615850e-47 |
| Msa0022970 | Msa0763330 | 0.824087 | 9.761112e-54 | -8.615850e-47 |
| Msa0022970 | Msa0769590 | 0.875101 | 4.017363e-68 | -8.615850e-47 |
| Msa0022970 | Msa0772480 | 0.827116 | 1.868118e-54 | -8.615850e-47 |
| Msa0022970 | Msa0780490 | 0.872901 | 2.227464e-67 | -8.615850e-47 |
| Msa0022970 | Msa0783630 | 0.807861 | 4.110044e-50 | -8.615850e-47 |
| Msa0022970 | Msa0785130 | 0.894271 | 2.884651e-75 | -8.615850e-47 |
| Msa0022970 | Msa0789680 | 0.893022 | 9.250124e-75 | -8.615850e-47 |
| Msa0022970 | Msa0798440 | 0.824055 | 9.931333e-54 | -8.615850e-47 |
| Msa0022970 | Msa0802410 | 0.877948 | 4.169547e-69 | -8.615850e-47 |
| Msa0022970 | Msa0806880 | 0.886185 | 4.259709e-72 | -8.615850e-47 |
| Msa0022970 | Msa0817540 | 0.883604 | 3.900028e-71 | -8.615850e-47 |
| Msa0022970 | Msa0844220 | -0.801775 | 7.678129e-49 | -8.615850e-47 |
| Msa0022970 | Msa0867060 | 0.809293 | 2.032638e-50 | -8.615850e-47 |
| Msa0022970 | Msa0876170 | 0.823446 | 1.379482e-53 | -8.615850e-47 |
| Msa0022970 | Msa0888810 | 0.814487 | 1.502628e-51 | -8.615850e-47 |
| Msa0022970 | Msa0913240 | 0.827577 | 1.449153e-54 | -8.615850e-47 |
| Msa0022970 | Msa0925770 | 0.816863 | 4.440286e-52 | -8.615850e-47 |
| Msa0022970 | Msa0930490 | 0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0022970 | Msa0933300 | 0.825432 | 4.703200e-54 | -8.615850e-47 |
| Msa0022970 | Msa0945480 | 0.818541 | 1.857328e-52 | -8.615850e-47 |
| Msa0022970 | Msa0960830 | 0.822825 | 1.925742e-53 | -8.615850e-47 |
| Msa0022970 | Msa0963020 | 0.815152 | 1.070036e-51 | -8.615850e-47 |
| Msa0022970 | Msa0966010 | 0.812550 | 4.007110e-51 | -8.615850e-47 |
| Msa0022970 | Msa0989540 | 0.811855 | 5.682106e-51 | -8.615850e-47 |
| Msa0022970 | Msa1006840 | 0.842800 | 2.072937e-58 | -8.615850e-47 |
| Msa0022970 | Msa1012740 | 0.848363 | 6.430481e-60 | -8.615850e-47 |
| Msa0022970 | Msa1019240 | 0.889745 | 1.839992e-73 | -8.615850e-47 |
| Msa0022970 | Msa1019260 | 0.872042 | 4.309763e-67 | -8.615850e-47 |
| Msa0022970 | Msa1039520 | 0.847583 | 1.054981e-59 | -8.615850e-47 |
| Msa0022970 | Msa1043690 | 0.846898 | 1.626311e-59 | -8.615850e-47 |
| Msa0022970 | Msa1048690 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
| Msa0022970 | Msa1072710 | 0.878772 | 2.142105e-69 | -8.615850e-47 |
| Msa0022970 | Msa1080350 | 0.805919 | 1.057963e-49 | -8.615850e-47 |
| Msa0022970 | Msa1081150 | 0.806174 | 9.348248e-50 | -8.615850e-47 |
| Msa0022970 | Msa1088490 | 0.871380 | 7.140063e-67 | -8.615850e-47 |
| Msa0022970 | Msa1104140 | 0.874226 | 7.971605e-68 | -8.615850e-47 |
| Msa0022970 | Msa1104210 | 0.877887 | 4.381454e-69 | -8.615850e-47 |
| Msa0022970 | Msa1122820 | 0.835048 | 2.105370e-56 | -8.615850e-47 |
| Msa0022970 | Msa1125860 | 0.804547 | 2.049637e-49 | -8.615850e-47 |
| Msa0022970 | Msa1126060 | 0.800523 | 1.384582e-48 | -8.615850e-47 |
| Msa0022970 | Msa1126470 | 0.806667 | 7.358200e-50 | -8.615850e-47 |
| Msa0022970 | Msa1126510 | 0.804257 | 2.355985e-49 | -8.615850e-47 |
| Msa0022970 | Msa1135890 | 0.883282 | 5.117960e-71 | -8.615850e-47 |
| Msa0022970 | Msa1138870 | 0.835442 | 1.673906e-56 | -8.615850e-47 |
| Msa0022970 | Msa1165780 | 0.827463 | 1.542811e-54 | -8.615850e-47 |
| Msa0022970 | Msa1166860 | 0.814897 | 1.219116e-51 | -8.615850e-47 |
| Msa0022970 | Msa1166870 | 0.888422 | 5.987980e-73 | -8.615850e-47 |
| Msa0022970 | Msa1167540 | 0.806427 | 8.271870e-50 | -8.615850e-47 |
| Msa0022970 | Msa1167550 | 0.816988 | 4.162305e-52 | -8.615850e-47 |
| Msa0022970 | Msa1179980 | 0.806416 | 8.313950e-50 | -8.615850e-47 |
| Msa0022970 | Msa1181830 | 0.823278 | 1.509586e-53 | -8.615850e-47 |
| Msa0022970 | Msa1195300 | 0.836130 | 1.120939e-56 | -8.615850e-47 |
| Msa0022970 | Msa1197320 | 0.801135 | 1.038420e-48 | -8.615850e-47 |
| Msa0022970 | Msa1208020 | 0.830385 | 3.026026e-55 | -8.615850e-47 |
| Msa0022970 | Msa1209200 | 0.815616 | 8.439365e-52 | -8.615850e-47 |
| Msa0022970 | Msa1209260 | 0.800718 | 1.263458e-48 | -8.615850e-47 |
| Msa0022970 | Msa1215820 | 0.868552 | 5.998773e-66 | -8.615850e-47 |
| Msa0022970 | Msa1230580 | 0.812595 | 3.918291e-51 | -8.615850e-47 |
| Msa0022970 | Msa1241190 | 0.822629 | 2.138121e-53 | -8.615850e-47 |
| Msa0022970 | Msa1256950 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa0022970 | Msa1257510 | 0.836712 | 7.966301e-57 | -8.615850e-47 |
| Msa0022970 | Msa1260530 | 0.901288 | 3.118563e-78 | -8.615850e-47 |
| Msa0022970 | Msa1262890 | 0.844473 | 7.395870e-59 | -8.615850e-47 |
| Msa0022970 | Msa1265630 | 0.864388 | 1.260308e-64 | -8.615850e-47 |
| Msa0022970 | Msa1266060 | 0.802341 | 5.874718e-49 | -8.615850e-47 |
| Msa0022970 | Msa1270620 | 0.810617 | 1.054611e-50 | -8.615850e-47 |
| Msa0022970 | Msa1270690 | 0.804042 | 2.611323e-49 | -8.615850e-47 |
| Msa0022970 | Msa1305050 | 0.827234 | 1.750868e-54 | -8.615850e-47 |
| Msa0022970 | Msa1329540 | 0.804154 | 2.474811e-49 | -8.615850e-47 |
| Msa0022970 | Msa1331250 | 0.823506 | 1.335036e-53 | -8.615850e-47 |
| Msa0022970 | Msa1331710 | 0.890479 | 9.491830e-74 | -8.615850e-47 |
| Msa0022970 | Msa1332250 | 0.811477 | 6.865930e-51 | -8.615850e-47 |
| Msa0022970 | Msa1338190 | 0.812831 | 3.478417e-51 | -8.615850e-47 |
| Msa0022970 | Msa1343260 | 0.801539 | 8.586700e-49 | -8.615850e-47 |
| Msa0022970 | Msa1349570 | 0.893427 | 6.348666e-75 | -8.615850e-47 |
| Msa0022970 | Msa1351540 | 0.801692 | 7.984773e-49 | -8.615850e-47 |
| Msa0022970 | Msa1355700 | 0.822732 | 2.024244e-53 | -8.615850e-47 |
| Msa0022970 | Msa1356790 | 0.818454 | 1.943517e-52 | -8.615850e-47 |
| Msa0022970 | Msa1363330 | 0.896377 | 3.911512e-76 | -8.615850e-47 |
| Msa0022970 | Msa1366180 | 0.873863 | 1.057348e-67 | -8.615850e-47 |
| Msa0022970 | Msa1369190 | 0.861374 | 1.073023e-63 | -8.615850e-47 |
| Msa0022970 | Msa1374120 | 0.844269 | 8.391352e-59 | -8.615850e-47 |
| Msa0022970 | Msa1379760 | 0.844170 | 8.923755e-59 | -8.615850e-47 |
| Msa0022970 | Msa1386600 | 0.897145 | 1.866806e-76 | -8.615850e-47 |
| Msa0022970 | Msa1387410 | 0.885957 | 5.190658e-72 | -8.615850e-47 |
| Msa0022970 | Msa1394290 | 0.843723 | 1.176051e-58 | -8.615850e-47 |
| Msa0022970 | Msa1399530 | 0.811977 | 5.344615e-51 | -8.615850e-47 |
| Msa0022970 | Msa1407070 | 0.822996 | 1.756658e-53 | -8.615850e-47 |
| Msa0022970 | Msa1410440 | 0.804775 | 1.836958e-49 | -8.615850e-47 |
| Msa0022970 | Msa1413500 | 0.892896 | 1.039891e-74 | -8.615850e-47 |
| Msa0022970 | Msa1426370 | 0.847244 | 1.307082e-59 | -8.615850e-47 |
| Msa0022970 | Msa1426490 | 0.906946 | 8.607370e-81 | -8.615850e-47 |
| Msa0022970 | Msa1427560 | 0.869553 | 2.840561e-66 | -8.615850e-47 |
| Msa0022970 | Msa1432700 | 0.833232 | 6.003908e-56 | -8.615850e-47 |
| Msa0022970 | Msa1433310 | 0.818357 | 2.044372e-52 | -8.615850e-47 |
| Msa0022970 | Msa1448690 | 0.850967 | 1.205663e-60 | -8.615850e-47 |
| Msa0022970 | Msa1450280 | 0.822287 | 2.568095e-53 | -8.615850e-47 |
| Msa0022970 | Msa1457920 | 0.810221 | 1.284141e-50 | -8.615850e-47 |
| Msa0022970 | Msa1465260 | 0.863464 | 2.444427e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0022970 | MtrunA17_Chr1g0176261 | 97.490 | 239 | 6 | 0 | 1 | 239 | 1 | 239 | 1.11e-174 | 479 |
| Msa0022970 | MtrunA17_Chr7g0268431 | 97.000 | 200 | 4 | 1 | 40 | 239 | 9 | 206 | 4.38e-142 | 396 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0022970 | AT2G37270.1 | 92.105 | 190 | 14 | 1 | 51 | 239 | 18 | 207 | 2.30e-129 | 364 |
| Msa0022970 | AT2G37270.2 | 92.105 | 190 | 14 | 1 | 51 | 239 | 18 | 207 | 2.30e-129 | 364 |
| Msa0022970 | AT3G11940.1 | 90.000 | 190 | 18 | 1 | 51 | 239 | 18 | 207 | 1.60e-127 | 359 |
| Msa0022970 | AT3G11940.2 | 90.000 | 190 | 18 | 1 | 51 | 239 | 18 | 207 | 1.60e-127 | 359 |
Find 71 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAACAATGCACCCAAATT+AGG | 0.138418 | 1_1:+43469619 | Msa0022970:CDS |
| ATAATTTGAATGATGGTTTA+TGG | 0.240046 | 1_1:+43472829 | Msa0022970:three_prime_UTR |
| GTATGTGATAAACCCTAATT+TGG | 0.258879 | 1_1:-43469632 | None:intergenic |
| GCATCAACAATGACCTGAAT+TGG | 0.291343 | 1_1:-43470482 | None:intergenic |
| CAGATTACTGATTTGTCTCT+TGG | 0.294356 | 1_1:+43470245 | Msa0022970:intron |
| CTTTATAATAAACCATGATT+TGG | 0.315654 | 1_1:-43472881 | None:intergenic |
| AATTTGGGTGCATTGTTTCA+TGG | 0.320493 | 1_1:-43469616 | None:intergenic |
| CCATAAAACTTCATTAAATA+AGG | 0.324325 | 1_1:-43472692 | None:intergenic |
| GAAACAATGCACCCAAATTA+GGG | 0.331019 | 1_1:+43469620 | Msa0022970:CDS |
| GATACTCGAAGAAGCGATTC+AGG | 0.345165 | 1_1:+43470324 | Msa0022970:CDS |
| AGCTTGACTTCGATCAGGTT+TGG | 0.359219 | 1_1:-43469838 | None:intergenic |
| CTGGAGCTTCGATGACGTTC+AGG | 0.377509 | 1_1:+43469870 | Msa0022970:CDS |
| CAATGACCTGAATTGGGTTC+TGG | 0.383650 | 1_1:-43470475 | None:intergenic |
| TGGAACATATGTTGCATGTT+TGG | 0.388336 | 1_1:-43470288 | None:intergenic |
| AGATTACTGATTTGTCTCTT+GGG | 0.391228 | 1_1:+43470246 | Msa0022970:intron |
| GGATCTGAAACGACTGCAAC+AGG | 0.391313 | 1_1:-43469817 | None:intergenic |
| TAATTTGAATGATGGTTTAT+GGG | 0.394565 | 1_1:+43472830 | Msa0022970:three_prime_UTR |
| TAATATGATAATTTGAATGA+TGG | 0.400451 | 1_1:+43472822 | Msa0022970:three_prime_UTR |
| AACCGACCAGAACCCAATTC+AGG | 0.402601 | 1_1:+43470469 | Msa0022970:CDS |
| GAAAGAAGCTTATGGCAGTT+AGG | 0.436208 | 1_1:+43470411 | Msa0022970:CDS |
| GTTTCATATATGCCAAATCA+TGG | 0.437423 | 1_1:+43472869 | Msa0022970:three_prime_UTR |
| CGTGAAGATGCAACTCGTAT+TGG | 0.440985 | 1_1:+43472278 | Msa0022970:CDS |
| AAGACTGAAGCTGCTGAGAA+TGG | 0.444567 | 1_1:-43469665 | None:intergenic |
| GCCATCTATCTTCTAACTAC+TGG | 0.451088 | 1_1:+43472362 | Msa0022970:CDS |
| GAACTTATTAATGCAGCAAA+AGG | 0.453667 | 1_1:+43472440 | Msa0022970:CDS |
| ACTTTAGCTTTAGCAAATCA+TGG | 0.457895 | 1_1:-43472947 | None:intergenic |
| GAACAATGGAAAGAAGCTTA+TGG | 0.464147 | 1_1:+43470403 | Msa0022970:CDS |
| AATTGTCTTAATATTTCTAA+AGG | 0.465228 | 1_1:-43472399 | None:intergenic |
| TTGTTGATGCTGTTGTCAAC+AGG | 0.466740 | 1_1:+43470495 | Msa0022970:CDS |
| TGAAGAGCTTGACTTCGATC+AGG | 0.472581 | 1_1:-43469843 | None:intergenic |
| GTTGCTAAGGCAAATCGTTA+AGG | 0.480990 | 1_1:+43472624 | Msa0022970:CDS |
| GCAACTCGTATTGGTTCTGC+TGG | 0.481223 | 1_1:+43472287 | Msa0022970:CDS |
| CAGCAAAAGGATCATCCAAC+AGG | 0.484289 | 1_1:+43472453 | Msa0022970:CDS |
| GATTACTGATTTGTCTCTTG+GGG | 0.496398 | 1_1:+43470247 | Msa0022970:intron |
| TAAGGAGCTTGTGGCAGCAT+TGG | 0.502599 | 1_1:+43472642 | Msa0022970:exon |
| AAGTCAAGCTCTTCAACCGC+TGG | 0.503610 | 1_1:+43469851 | Msa0022970:CDS |
| CATCAACAATGACCTGAATT+GGG | 0.506610 | 1_1:-43470481 | None:intergenic |
| ACCAGTAGTTAGAAGATAGA+TGG | 0.507365 | 1_1:-43472363 | None:intergenic |
| TGCTGAGAATGGAGAAGGTA+TGG | 0.510821 | 1_1:-43469654 | None:intergenic |
| TTGTCTCTTGGGGATTACAT+TGG | 0.513322 | 1_1:+43470257 | Msa0022970:CDS |
| TGAAATTGAAAGAGTTGCTA+AGG | 0.514135 | 1_1:+43472611 | Msa0022970:CDS |
| GGCTTGATTCACACGACGAA+GGG | 0.519901 | 1_1:-43472342 | None:intergenic |
| TAGCTTTAGCAAATCATGGT+TGG | 0.526415 | 1_1:-43472943 | None:intergenic |
| TGCTGGAGTTGTAAGAAGAC+AGG | 0.532743 | 1_1:+43472304 | Msa0022970:CDS |
| ACATATGTTCCACACACTGC+TGG | 0.537649 | 1_1:+43470299 | Msa0022970:CDS |
| TTAGTGAGCCTCTCAACAAT+GGG | 0.543323 | 1_1:-43470359 | None:intergenic |
| TAGGATCATCAAGCATGCTA+TGG | 0.545010 | 1_1:+43470430 | Msa0022970:CDS |
| CTAACTCTCTCATGATGCAT+GGG | 0.561374 | 1_1:+43470378 | Msa0022970:CDS |
| GGCATATATGAAACATCGTA+AGG | 0.561492 | 1_1:-43472860 | None:intergenic |
| GTTAGTGAGCCTCTCAACAA+TGG | 0.562680 | 1_1:-43470360 | None:intergenic |
| ACTAACTCTCTCATGATGCA+TGG | 0.563337 | 1_1:+43470377 | Msa0022970:CDS |
| AACCGTGATTGTGGTGGATG+CGG | 0.564962 | 1_1:-43469692 | None:intergenic |
| ATGATGCATGGGAGGAACAA+TGG | 0.566550 | 1_1:+43470389 | Msa0022970:CDS |
| AGTTGTAAGAAGACAGGCTG+TGG | 0.574582 | 1_1:+43472310 | Msa0022970:CDS |
| TATGTGATAAACCCTAATTT+GGG | 0.587986 | 1_1:-43469631 | None:intergenic |
| GAAGGTTGATAATCAAACAC+AGG | 0.588182 | 1_1:-43472791 | None:intergenic |
| TGCCGCATCCACCACAATCA+CGG | 0.590840 | 1_1:+43469690 | Msa0022970:CDS |
| CTCAGTGTCCCATTGTTGAG+AGG | 0.591866 | 1_1:+43470351 | Msa0022970:CDS |
| GCAAATCGTTAAGGAGCTTG+TGG | 0.593014 | 1_1:+43472633 | Msa0022970:exon |
| TTCTTCAATGACATCAGCCA+TGG | 0.596830 | 1_1:-43469794 | None:intergenic |
| GAAGCTGCTGAGAATGGAGA+AGG | 0.604330 | 1_1:-43469659 | None:intergenic |
| GACCTGAATTGGGTTCTGGT+CGG | 0.606242 | 1_1:-43470471 | None:intergenic |
| GAGTATCTACCAGCAGTGTG+TGG | 0.639793 | 1_1:-43470308 | None:intergenic |
| CAACGATAAAACAAAATCTG+AGG | 0.644709 | 1_1:-43472667 | None:intergenic |
| ACTCTCTCATGATGCATGGG+AGG | 0.648954 | 1_1:+43470381 | Msa0022970:CDS |
| TGAACGAACCGTGATTGTGG+TGG | 0.652757 | 1_1:-43469698 | None:intergenic |
| AAATGAACGAACCGTGATTG+TGG | 0.654236 | 1_1:-43469701 | None:intergenic |
| GAACGTCATCGAAGCTCCAG+CGG | 0.655762 | 1_1:-43469867 | None:intergenic |
| TGGCTTGATTCACACGACGA+AGG | 0.656812 | 1_1:-43472343 | None:intergenic |
| GCTTGATTCACACGACGAAG+GGG | 0.665666 | 1_1:-43472341 | None:intergenic |
| ATACGAGTTGCATCTTCACG+AGG | 0.709806 | 1_1:-43472275 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATTAAAAAATAAATAAC+TGG | - | chr1_1:43470726-43470745 | None:intergenic | 10.0% |
| !! | TTAAAAATTAATTAGAACTA+TGG | + | chr1_1:43471386-43471405 | Msa0022970:intron | 10.0% |
| !!! | GTTTTTTTAGTTCAATTAAT+TGG | + | chr1_1:43470018-43470037 | Msa0022970:intron | 15.0% |
| !!! | GATATTTTTTTTTGTGTTTT+TGG | + | chr1_1:43470040-43470059 | Msa0022970:intron | 15.0% |
| !!! | CAATTTTTTGTTTTATTTTC+TGG | + | chr1_1:43470598-43470617 | Msa0022970:intron | 15.0% |
| !!! | TAATATTTCTATGTTTTTGA+TGG | + | chr1_1:43470871-43470890 | Msa0022970:intron | 15.0% |
| !! | ATATCTAATTAGATTAGAAA+TGG | + | chr1_1:43471104-43471123 | Msa0022970:intron | 15.0% |
| !!! | AAACATATTTCTATTCATTA+AGG | - | chr1_1:43471937-43471956 | None:intergenic | 15.0% |
| !!! | ATGTTTCAAAATTTTGAATT+TGG | + | chr1_1:43472208-43472227 | Msa0022970:intron | 15.0% |
| !!! | AATTGTCTTAATATTTCTAA+AGG | - | chr1_1:43472402-43472421 | None:intergenic | 15.0% |
| !!! | CTTATTTAATGAAGTTTTAT+GGG | + | chr1_1:43472693-43472712 | Msa0022970:three_prime_UTR | 15.0% |
| !!! | TATCATATTATAACTTTTGA+AGG | - | chr1_1:43472812-43472831 | None:intergenic | 15.0% |
| !! | TAATATGATAATTTGAATGA+TGG | + | chr1_1:43472822-43472841 | Msa0022970:three_prime_UTR | 15.0% |
| !! | AAAAATGTAGTGATTAATGT+TGG | + | chr1_1:43470202-43470221 | Msa0022970:intron | 20.0% |
| !!! | TTTTATTTTCTGGTTTGATA+TGG | + | chr1_1:43470608-43470627 | Msa0022970:intron | 20.0% |
| !! | AAATAAATAACTGGAATGTT+AGG | - | chr1_1:43470717-43470736 | None:intergenic | 20.0% |
| !! | AGTTATCATAAATAAACACT+TGG | + | chr1_1:43470844-43470863 | Msa0022970:intron | 20.0% |
| !! | GTTATCATAAATAAACACTT+GGG | + | chr1_1:43470845-43470864 | Msa0022970:intron | 20.0% |
| !! | TGTTTGTAATTATTGGAATT+TGG | + | chr1_1:43470940-43470959 | Msa0022970:intron | 20.0% |
| !! | GATATTAAAAAACAATAGTC+TGG | - | chr1_1:43471089-43471108 | None:intergenic | 20.0% |
| !!! | TGTTTCTTTTCATACATAAA+AGG | - | chr1_1:43471148-43471167 | None:intergenic | 20.0% |
| !! | ACTCATATAGAAACATAAAT+AGG | - | chr1_1:43471437-43471456 | None:intergenic | 20.0% |
| !!! | ATATTAACCTTTTAGAAAAG+GGG | - | chr1_1:43472076-43472095 | None:intergenic | 20.0% |
| !!! | CATATTAACCTTTTAGAAAA+GGG | - | chr1_1:43472077-43472096 | None:intergenic | 20.0% |
| !! | TCATAAGTCAAAGAATTAAA+AGG | - | chr1_1:43472549-43472568 | None:intergenic | 20.0% |
| !! | CCATAAAACTTCATTAAATA+AGG | - | chr1_1:43472695-43472714 | None:intergenic | 20.0% |
| !!! | CCTTATTTAATGAAGTTTTA+TGG | + | chr1_1:43472692-43472711 | Msa0022970:three_prime_UTR | 20.0% |
| !! | ATAATTTGAATGATGGTTTA+TGG | + | chr1_1:43472829-43472848 | Msa0022970:three_prime_UTR | 20.0% |
| !! | TAATTTGAATGATGGTTTAT+GGG | + | chr1_1:43472830-43472849 | Msa0022970:three_prime_UTR | 20.0% |
| !! | CTTTATAATAAACCATGATT+TGG | - | chr1_1:43472884-43472903 | None:intergenic | 20.0% |
| ! | TATGTGATAAACCCTAATTT+GGG | - | chr1_1:43469634-43469653 | None:intergenic | 25.0% |
| ! | TTCTGTGATATCAGATTATT+TGG | + | chr1_1:43470095-43470114 | Msa0022970:intron | 25.0% |
| !!! | ATGAATTTTTGTTTCCCTAT+TGG | + | chr1_1:43470642-43470661 | Msa0022970:intron | 25.0% |
| !!! | CTGTTTCTGTTTGTAATTAT+TGG | + | chr1_1:43470933-43470952 | Msa0022970:intron | 25.0% |
| !!! | TTAATAGTTCTGGTTTGATA+TGG | + | chr1_1:43470971-43470990 | Msa0022970:intron | 25.0% |
| ! | ATGAATATTTGTTTCCCTAT+TGG | + | chr1_1:43471005-43471024 | Msa0022970:intron | 25.0% |
| !! | ATGAATATCTGTTTTCCTAT+TGG | + | chr1_1:43471283-43471302 | Msa0022970:intron | 25.0% |
| ! | ATCAAATACGTGTGAAAATT+TGG | + | chr1_1:43471519-43471538 | Msa0022970:intron | 25.0% |
| !!! | ATGAATGATTTGTTTCCTAT+TGG | + | chr1_1:43471588-43471607 | Msa0022970:intron | 25.0% |
| ! | CATATGAGTTATGATTATCT+TGG | + | chr1_1:43471760-43471779 | Msa0022970:intron | 25.0% |
| ! | TTATCTATTTAACTGATCGA+TGG | + | chr1_1:43471961-43471980 | Msa0022970:intron | 25.0% |
| !! | TTATTTACCCCTTTTCTAAA+AGG | + | chr1_1:43472066-43472085 | Msa0022970:intron | 25.0% |
| !!! | CCATATTAACCTTTTAGAAA+AGG | - | chr1_1:43472078-43472097 | None:intergenic | 25.0% |
| !!! | CCTTTTCTAAAAGGTTAATA+TGG | + | chr1_1:43472075-43472094 | Msa0022970:intron | 25.0% |
| !! | AATCTTGAACAAAACACTTT+TGG | - | chr1_1:43472120-43472139 | None:intergenic | 25.0% |
| ! | CACGAGATTAAAAAAATTCA+TGG | - | chr1_1:43472519-43472538 | None:intergenic | 25.0% |
| GTATGTGATAAACCCTAATT+TGG | - | chr1_1:43469635-43469654 | None:intergenic | 30.0% | |
| AGAAACAATGGATACAGAAA+AGG | - | chr1_1:43469752-43469771 | None:intergenic | 30.0% | |
| AAACGAAGAATGAGAAACAA+TGG | - | chr1_1:43469764-43469783 | None:intergenic | 30.0% | |
| !! | AGATTACTGATTTGTCTCTT+GGG | + | chr1_1:43470246-43470265 | Msa0022970:intron | 30.0% |
| ! | TATGAGTTGTTGATTGTTGA+TGG | + | chr1_1:43470518-43470537 | Msa0022970:intron | 30.0% |
| !!! | TATTTTCTGGTTTGATATGG+AGG | + | chr1_1:43470611-43470630 | Msa0022970:intron | 30.0% |
| TTCATTAGTAATGACTGTTG+AGG | + | chr1_1:43470787-43470806 | Msa0022970:intron | 30.0% | |
| !!! | GGTCTGTTTTTTAATAGTTC+TGG | + | chr1_1:43470961-43470980 | Msa0022970:intron | 30.0% |
| AAACAATAGTCTGGAAAGAT+AGG | - | chr1_1:43471080-43471099 | None:intergenic | 30.0% | |
| !!! | GATTTTTTTGTGTACTTGTC+TGG | + | chr1_1:43471239-43471258 | Msa0022970:intron | 30.0% |
| AATACAAAATGCCATCATTC+TGG | - | chr1_1:43471317-43471336 | None:intergenic | 30.0% | |
| TGTTATGATCTATTACTTGC+TGG | + | chr1_1:43471544-43471563 | Msa0022970:intron | 30.0% | |
| !! | ATCTCCCAGTTCATTTTTAT+TGG | + | chr1_1:43471665-43471684 | Msa0022970:intron | 30.0% |
| GTTGCCAATAAAAATGAACT+GGG | - | chr1_1:43471672-43471691 | None:intergenic | 30.0% | |
| AGTTGCCAATAAAAATGAAC+TGG | - | chr1_1:43471673-43471692 | None:intergenic | 30.0% | |
| GAAACAGTGATAATCAGAAT+AGG | + | chr1_1:43471826-43471845 | Msa0022970:intron | 30.0% | |
| ! | ATGATTGGTTATTTCCCTAT+TGG | + | chr1_1:43471860-43471879 | Msa0022970:intron | 30.0% |
| AACAATCTCAAAGTAAACGA+TGG | - | chr1_1:43472048-43472067 | None:intergenic | 30.0% | |
| TAACAGTACTAACAAGAACA+GGG | - | chr1_1:43472188-43472207 | None:intergenic | 30.0% | |
| TTAACAGTACTAACAAGAAC+AGG | - | chr1_1:43472189-43472208 | None:intergenic | 30.0% | |
| GAACTTATTAATGCAGCAAA+AGG | + | chr1_1:43472440-43472459 | Msa0022970:CDS | 30.0% | |
| ! | ATTTGAAAAAGCATACCTGT+TGG | - | chr1_1:43472471-43472490 | None:intergenic | 30.0% |
| TGAAATTGAAAGAGTTGCTA+AGG | + | chr1_1:43472611-43472630 | Msa0022970:CDS | 30.0% | |
| CAACGATAAAACAAAATCTG+AGG | - | chr1_1:43472670-43472689 | None:intergenic | 30.0% | |
| ! | AATGATGGTTTATGGGTTTT+TGG | + | chr1_1:43472837-43472856 | Msa0022970:three_prime_UTR | 30.0% |
| GTTTCATATATGCCAAATCA+TGG | + | chr1_1:43472869-43472888 | Msa0022970:three_prime_UTR | 30.0% | |
| !! | ACTTTAGCTTTAGCAAATCA+TGG | - | chr1_1:43472950-43472969 | None:intergenic | 30.0% |
| ! | CTAAAGCTAAAGTCTGTTTT+TGG | + | chr1_1:43472957-43472976 | Msa0022970:three_prime_UTR | 30.0% |
| TGAAACAATGCACCCAAATT+AGG | + | chr1_1:43469619-43469638 | Msa0022970:CDS | 35.0% | |
| GAAACAATGCACCCAAATTA+GGG | + | chr1_1:43469620-43469639 | Msa0022970:CDS | 35.0% | |
| !! | CAGATTACTGATTTGTCTCT+TGG | + | chr1_1:43470245-43470264 | Msa0022970:intron | 35.0% |
| !! | GATTACTGATTTGTCTCTTG+GGG | + | chr1_1:43470247-43470266 | Msa0022970:intron | 35.0% |
| TGGAACATATGTTGCATGTT+TGG | - | chr1_1:43470291-43470310 | None:intergenic | 35.0% | |
| GAACAATGGAAAGAAGCTTA+TGG | + | chr1_1:43470403-43470422 | Msa0022970:CDS | 35.0% | |
| CATCAACAATGACCTGAATT+GGG | - | chr1_1:43470484-43470503 | None:intergenic | 35.0% | |
| TAACTGGAATGTTAGGAGAA+TGG | - | chr1_1:43470710-43470729 | None:intergenic | 35.0% | |
| !! | TTCTGGTTTGATATGGAGAA+TGG | + | chr1_1:43470978-43470997 | Msa0022970:intron | 35.0% |
| ATTCTGGCAATCAAACCAAT+AGG | - | chr1_1:43471301-43471320 | None:intergenic | 35.0% | |
| TAGGAGAATGACATGATGAT+TGG | + | chr1_1:43471845-43471864 | Msa0022970:intron | 35.0% | |
| GATGGCATAATTAAGCAACA+AGG | - | chr1_1:43472030-43472049 | None:intergenic | 35.0% | |
| ACCAGTAGTTAGAAGATAGA+TGG | - | chr1_1:43472366-43472385 | None:intergenic | 35.0% | |
| GTGTACGCAAACAAAAATCT+AGG | - | chr1_1:43472728-43472747 | None:intergenic | 35.0% | |
| !! | GAAGGTTGATAATCAAACAC+AGG | - | chr1_1:43472794-43472813 | None:intergenic | 35.0% |
| GGCATATATGAAACATCGTA+AGG | - | chr1_1:43472863-43472882 | None:intergenic | 35.0% | |
| !! | TAGCTTTAGCAAATCATGGT+TGG | - | chr1_1:43472946-43472965 | None:intergenic | 35.0% |
| AAATGAACGAACCGTGATTG+TGG | - | chr1_1:43469704-43469723 | None:intergenic | 40.0% | |
| CGAAGATTCGAAGAAACTGA+AGG | - | chr1_1:43469727-43469746 | None:intergenic | 40.0% | |
| TTCTTCAATGACATCAGCCA+TGG | - | chr1_1:43469797-43469816 | None:intergenic | 40.0% | |
| TTGTCTCTTGGGGATTACAT+TGG | + | chr1_1:43470257-43470276 | Msa0022970:CDS | 40.0% | |
| TTAGTGAGCCTCTCAACAAT+GGG | - | chr1_1:43470362-43470381 | None:intergenic | 40.0% | |
| ACTAACTCTCTCATGATGCA+TGG | + | chr1_1:43470377-43470396 | Msa0022970:CDS | 40.0% | |
| CTAACTCTCTCATGATGCAT+GGG | + | chr1_1:43470378-43470397 | Msa0022970:CDS | 40.0% | |
| GAAAGAAGCTTATGGCAGTT+AGG | + | chr1_1:43470411-43470430 | Msa0022970:CDS | 40.0% | |
| TAGGATCATCAAGCATGCTA+TGG | + | chr1_1:43470430-43470449 | Msa0022970:CDS | 40.0% | |
| GCATCAACAATGACCTGAAT+TGG | - | chr1_1:43470485-43470504 | None:intergenic | 40.0% | |
| TTGTTGATGCTGTTGTCAAC+AGG | + | chr1_1:43470495-43470514 | Msa0022970:CDS | 40.0% | |
| !! | TTCTGGTTTGATATGGAGGA+TGG | + | chr1_1:43470615-43470634 | Msa0022970:intron | 40.0% |
| CTCTTGCAGTCAAACCAATA+GGG | - | chr1_1:43470659-43470678 | None:intergenic | 40.0% | |
| ACTCTTGCAGTCAAACCAAT+AGG | - | chr1_1:43470660-43470679 | None:intergenic | 40.0% | |
| CTCTTGCAGTCAAACCAATA+GGG | - | chr1_1:43470659-43470678 | None:intergenic | 40.0% | |
| ACTCTTGCAGTCAAACCAAT+AGG | - | chr1_1:43470660-43470679 | None:intergenic | 40.0% | |
| AGTCTGGAAAGATAGGAGAA+TGG | - | chr1_1:43471073-43471092 | None:intergenic | 40.0% | |
| TGGTTTGATTGCCAGAATGA+TGG | + | chr1_1:43471303-43471322 | Msa0022970:intron | 40.0% | |
| !! | TACTTGCTGGCTTGATTTGA+AGG | + | chr1_1:43471557-43471576 | Msa0022970:intron | 40.0% |
| AATACAAGCTGCCATCATTC+TGG | - | chr1_1:43471622-43471641 | None:intergenic | 40.0% | |
| GAACTGGGAGATAAGAAGAA+TGG | - | chr1_1:43471657-43471676 | None:intergenic | 40.0% | |
| TCCAGGCAATCAAACCAATA+GGG | - | chr1_1:43471877-43471896 | None:intergenic | 40.0% | |
| ATCCAGGCAATCAAACCAAT+AGG | - | chr1_1:43471878-43471897 | None:intergenic | 40.0% | |
| ATACATAAGTGCCATCATCC+AGG | - | chr1_1:43471894-43471913 | None:intergenic | 40.0% | |
| ACAAGTACATACAACTGGTG+AGG | - | chr1_1:43471995-43472014 | None:intergenic | 40.0% | |
| TCACCAGTTGTATGTACTTG+TGG | + | chr1_1:43471994-43472013 | Msa0022970:intron | 40.0% | |
| CAACCACAAGTACATACAAC+TGG | - | chr1_1:43472000-43472019 | None:intergenic | 40.0% | |
| CAGTTGTATGTACTTGTGGT+TGG | + | chr1_1:43471998-43472017 | Msa0022970:intron | 40.0% | |
| GTACTAACAAGAACAGGGAA+AGG | - | chr1_1:43472183-43472202 | None:intergenic | 40.0% | |
| !! | CACTTGTGTCATTTGTACAG+TGG | + | chr1_1:43472251-43472270 | Msa0022970:intron | 40.0% |
| GCCATCTATCTTCTAACTAC+TGG | + | chr1_1:43472362-43472381 | Msa0022970:CDS | 40.0% | |
| GTTGCTAAGGCAAATCGTTA+AGG | + | chr1_1:43472624-43472643 | Msa0022970:CDS | 40.0% | |
| TGCTGAGAATGGAGAAGGTA+TGG | - | chr1_1:43469657-43469676 | None:intergenic | 45.0% | |
| AAGACTGAAGCTGCTGAGAA+TGG | - | chr1_1:43469668-43469687 | None:intergenic | 45.0% | |
| TTCGTTTCTCTATGCAGCCA+TGG | + | chr1_1:43469777-43469796 | Msa0022970:intron | 45.0% | |
| AGCTTGACTTCGATCAGGTT+TGG | - | chr1_1:43469841-43469860 | None:intergenic | 45.0% | |
| TGAAGAGCTTGACTTCGATC+AGG | - | chr1_1:43469846-43469865 | None:intergenic | 45.0% | |
| ACATATGTTCCACACACTGC+TGG | + | chr1_1:43470299-43470318 | Msa0022970:CDS | 45.0% | |
| GATACTCGAAGAAGCGATTC+AGG | + | chr1_1:43470324-43470343 | Msa0022970:CDS | 45.0% | |
| GTTAGTGAGCCTCTCAACAA+TGG | - | chr1_1:43470363-43470382 | None:intergenic | 45.0% | |
| ATGATGCATGGGAGGAACAA+TGG | + | chr1_1:43470389-43470408 | Msa0022970:CDS | 45.0% | |
| CAATGACCTGAATTGGGTTC+TGG | - | chr1_1:43470478-43470497 | None:intergenic | 45.0% | |
| ! | TTTTGTGTACTTGTCTGGCC+TGG | + | chr1_1:43471244-43471263 | Msa0022970:intron | 45.0% |
| GACCATTCTATTGACGTTGC+AGG | + | chr1_1:43471347-43471366 | Msa0022970:intron | 45.0% | |
| GACCTGCAACGTCAATAGAA+TGG | - | chr1_1:43471352-43471371 | None:intergenic | 45.0% | |
| !! | TGCTGGCTTGATTTGAAGGA+TGG | + | chr1_1:43471561-43471580 | Msa0022970:intron | 45.0% |
| ATTCTGGCGGTCAAACCAAT+AGG | - | chr1_1:43471606-43471625 | None:intergenic | 45.0% | |
| !! | TCCCTATTGGTTTGATTGCC+TGG | + | chr1_1:43471873-43471892 | Msa0022970:intron | 45.0% |
| TGGTTTGATTGCCTGGATGA+TGG | + | chr1_1:43471880-43471899 | Msa0022970:intron | 45.0% | |
| GTACATACAACTGGTGAGGA+TGG | - | chr1_1:43471991-43472010 | None:intergenic | 45.0% | |
| ATACGAGTTGCATCTTCACG+AGG | - | chr1_1:43472278-43472297 | None:intergenic | 45.0% | |
| CGTGAAGATGCAACTCGTAT+TGG | + | chr1_1:43472278-43472297 | Msa0022970:CDS | 45.0% | |
| TGCTGGAGTTGTAAGAAGAC+AGG | + | chr1_1:43472304-43472323 | Msa0022970:CDS | 45.0% | |
| AGTTGTAAGAAGACAGGCTG+TGG | + | chr1_1:43472310-43472329 | Msa0022970:CDS | 45.0% | |
| CAGCAAAAGGATCATCCAAC+AGG | + | chr1_1:43472453-43472472 | Msa0022970:CDS | 45.0% | |
| GCAAATCGTTAAGGAGCTTG+TGG | + | chr1_1:43472633-43472652 | Msa0022970:exon | 45.0% | |
| !!! | TTTTTTTTACATAAATTAAT+TGG | + | chr1_1:43470155-43470174 | Msa0022970:intron | 5.0% |
| !! | TTGATAAAAAAAAAAAAAAT+TGG | - | chr1_1:43471504-43471523 | None:intergenic | 5.0% |
| GAAGCTGCTGAGAATGGAGA+AGG | - | chr1_1:43469662-43469681 | None:intergenic | 50.0% | |
| !! | AACCGTGATTGTGGTGGATG+CGG | - | chr1_1:43469695-43469714 | None:intergenic | 50.0% |
| TGAACGAACCGTGATTGTGG+TGG | - | chr1_1:43469701-43469720 | None:intergenic | 50.0% | |
| ! | GGATCTGAAACGACTGCAAC+AGG | - | chr1_1:43469820-43469839 | None:intergenic | 50.0% |
| AAGTCAAGCTCTTCAACCGC+TGG | + | chr1_1:43469851-43469870 | Msa0022970:CDS | 50.0% | |
| GAGTATCTACCAGCAGTGTG+TGG | - | chr1_1:43470311-43470330 | None:intergenic | 50.0% | |
| CTCAGTGTCCCATTGTTGAG+AGG | + | chr1_1:43470351-43470370 | Msa0022970:CDS | 50.0% | |
| ACTCTCTCATGATGCATGGG+AGG | + | chr1_1:43470381-43470400 | Msa0022970:CDS | 50.0% | |
| AACCGACCAGAACCCAATTC+AGG | + | chr1_1:43470469-43470488 | Msa0022970:CDS | 50.0% | |
| ! | GACCTGAATTGGGTTCTGGT+CGG | - | chr1_1:43470474-43470493 | None:intergenic | 50.0% |
| ATCACTCCATCCTACGTTCC+AGG | - | chr1_1:43471265-43471284 | None:intergenic | 50.0% | |
| TGGTTTGACCGCCAGAATGA+TGG | + | chr1_1:43471608-43471627 | Msa0022970:intron | 50.0% | |
| ACAAGCTGCCATCATTCTGG+CGG | - | chr1_1:43471619-43471638 | None:intergenic | 50.0% | |
| !! | GCAACTCGTATTGGTTCTGC+TGG | + | chr1_1:43472287-43472306 | Msa0022970:CDS | 50.0% |
| GCTTGATTCACACGACGAAG+GGG | - | chr1_1:43472344-43472363 | None:intergenic | 50.0% | |
| GGCTTGATTCACACGACGAA+GGG | - | chr1_1:43472345-43472364 | None:intergenic | 50.0% | |
| TGGCTTGATTCACACGACGA+AGG | - | chr1_1:43472346-43472365 | None:intergenic | 50.0% | |
| TAAGGAGCTTGTGGCAGCAT+TGG | + | chr1_1:43472642-43472661 | Msa0022970:exon | 50.0% | |
| TGCCGCATCCACCACAATCA+CGG | + | chr1_1:43469690-43469709 | Msa0022970:CDS | 55.0% | |
| GAACGTCATCGAAGCTCCAG+CGG | - | chr1_1:43469870-43469889 | None:intergenic | 55.0% | |
| CTGGAGCTTCGATGACGTTC+AGG | + | chr1_1:43469870-43469889 | Msa0022970:CDS | 55.0% | |
| ACTTGTCTGGCCTGGAACGT+AGG | + | chr1_1:43471252-43471271 | Msa0022970:intron | 55.0% | |
| GTCTGGCCTGGAACGTAGGA+TGG | + | chr1_1:43471256-43471275 | Msa0022970:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 43469618 | 43472982 | 43469618 | ID=Msa0022970;Name=Msa0022970 |
| chr1_1 | mRNA | 43469618 | 43472982 | 43469618 | ID=Msa0022970-mRNA-1;Parent=Msa0022970;Name=Msa0022970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|1|0.8|1|1|1|5|338|239 |
| chr1_1 | exon | 43469618 | 43469711 | 43469618 | ID=Msa0022970-mRNA-1:exon:12593;Parent=Msa0022970-mRNA-1 |
| chr1_1 | exon | 43469794 | 43469891 | 43469794 | ID=Msa0022970-mRNA-1:exon:12594;Parent=Msa0022970-mRNA-1 |
| chr1_1 | exon | 43470248 | 43470516 | 43470248 | ID=Msa0022970-mRNA-1:exon:12595;Parent=Msa0022970-mRNA-1 |
| chr1_1 | exon | 43472271 | 43472474 | 43472271 | ID=Msa0022970-mRNA-1:exon:12596;Parent=Msa0022970-mRNA-1 |
| chr1_1 | exon | 43472590 | 43472982 | 43472590 | ID=Msa0022970-mRNA-1:exon:12597;Parent=Msa0022970-mRNA-1 |
| chr1_1 | CDS | 43469618 | 43469711 | 43469618 | ID=Msa0022970-mRNA-1:cds;Parent=Msa0022970-mRNA-1 |
| chr1_1 | CDS | 43469794 | 43469891 | 43469794 | ID=Msa0022970-mRNA-1:cds;Parent=Msa0022970-mRNA-1 |
| chr1_1 | CDS | 43470248 | 43470516 | 43470248 | ID=Msa0022970-mRNA-1:cds;Parent=Msa0022970-mRNA-1 |
| chr1_1 | CDS | 43472271 | 43472474 | 43472271 | ID=Msa0022970-mRNA-1:cds;Parent=Msa0022970-mRNA-1 |
| chr1_1 | CDS | 43472590 | 43472644 | 43472590 | ID=Msa0022970-mRNA-1:cds;Parent=Msa0022970-mRNA-1 |
| chr1_1 | three_prime_UTR | 43472645 | 43472982 | 43472645 | ID=Msa0022970-mRNA-1:three_prime_utr;Parent=Msa0022970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
