Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0612390 | XP_024638686.1 | 98.239 | 284 | 4 | 1 | 5 | 287 | 69 | 352 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0612390 | sp|Q9ASU7|PPAN_ARATH | 73.462 | 260 | 65 | 1 | 5 | 264 | 67 | 322 | 4.62e-132 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0612390 | 0.807161 | 5.786866e-50 | -8.615850e-47 |
| Msa0002790 | Msa0612390 | 0.816311 | 5.904771e-52 | -8.615850e-47 |
| Msa0004060 | Msa0612390 | 0.804900 | 1.730013e-49 | -8.615850e-47 |
| Msa0006880 | Msa0612390 | 0.805177 | 1.513703e-49 | -8.615850e-47 |
| Msa0007850 | Msa0612390 | 0.831495 | 1.616422e-55 | -8.615850e-47 |
| Msa0010490 | Msa0612390 | 0.805805 | 1.118162e-49 | -8.615850e-47 |
| Msa0010500 | Msa0612390 | 0.801322 | 9.512250e-49 | -8.615850e-47 |
| Msa0019390 | Msa0612390 | 0.865105 | 7.517830e-65 | -8.615850e-47 |
| Msa0022970 | Msa0612390 | 0.823550 | 1.303972e-53 | -8.615850e-47 |
| Msa0029260 | Msa0612390 | 0.817890 | 2.607584e-52 | -8.615850e-47 |
| Msa0032260 | Msa0612390 | 0.803074 | 4.146226e-49 | -8.615850e-47 |
| Msa0032580 | Msa0612390 | 0.805947 | 1.043612e-49 | -8.615850e-47 |
| Msa0040690 | Msa0612390 | 0.815422 | 9.322795e-52 | -8.615850e-47 |
| Msa0042280 | Msa0612390 | 0.804151 | 2.479296e-49 | -8.615850e-47 |
| Msa0043660 | Msa0612390 | 0.871575 | 6.158323e-67 | -8.615850e-47 |
| Msa0045730 | Msa0612390 | 0.813730 | 2.207526e-51 | -8.615850e-47 |
| Msa0047160 | Msa0612390 | 0.876377 | 1.465556e-68 | -8.615850e-47 |
| Msa0048180 | Msa0612390 | 0.810724 | 9.998794e-51 | -8.615850e-47 |
| Msa0055150 | Msa0612390 | 0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa0056270 | Msa0612390 | 0.802649 | 5.074408e-49 | -8.615850e-47 |
| Msa0066740 | Msa0612390 | 0.801847 | 7.421897e-49 | -8.615850e-47 |
| Msa0073480 | Msa0612390 | 0.810256 | 1.261571e-50 | -8.615850e-47 |
| Msa0079820 | Msa0612390 | 0.827688 | 1.362291e-54 | -8.615850e-47 |
| Msa0086180 | Msa0612390 | 0.803587 | 3.246540e-49 | -8.615850e-47 |
| Msa0094470 | Msa0612390 | 0.851785 | 7.076685e-61 | -8.615850e-47 |
| Msa0097600 | Msa0612390 | 0.836044 | 1.178488e-56 | -8.615850e-47 |
| Msa0115130 | Msa0612390 | 0.808035 | 3.773862e-50 | -8.615850e-47 |
| Msa0116130 | Msa0612390 | 0.805642 | 1.209697e-49 | -8.615850e-47 |
| Msa0118710 | Msa0612390 | 0.847190 | 1.352563e-59 | -8.615850e-47 |
| Msa0603320 | Msa0612390 | 0.821698 | 3.516788e-53 | -8.615850e-47 |
| Msa0603670 | Msa0612390 | 0.810645 | 1.040080e-50 | -8.615850e-47 |
| Msa0605000 | Msa0612390 | 0.839662 | 1.385469e-57 | -8.615850e-47 |
| Msa0609000 | Msa0612390 | 0.835606 | 1.521954e-56 | -8.615850e-47 |
| Msa0612390 | Msa0615440 | 0.822589 | 2.184768e-53 | -8.615850e-47 |
| Msa0612390 | Msa0618930 | 0.843282 | 1.541923e-58 | -8.615850e-47 |
| Msa0612390 | Msa0623200 | 0.820259 | 7.538413e-53 | -8.615850e-47 |
| Msa0612390 | Msa0631350 | 0.816831 | 4.515724e-52 | -8.615850e-47 |
| Msa0612390 | Msa0648780 | 0.821787 | 3.353407e-53 | -8.615850e-47 |
| Msa0612390 | Msa0656580 | 0.808532 | 2.956988e-50 | -8.615850e-47 |
| Msa0612390 | Msa0666230 | 0.824043 | 9.997265e-54 | -8.615850e-47 |
| Msa0612390 | Msa0684160 | 0.825933 | 3.576742e-54 | -8.615850e-47 |
| Msa0612390 | Msa0685140 | 0.814313 | 1.641424e-51 | -8.615850e-47 |
| Msa0612390 | Msa0687550 | 0.803691 | 3.089317e-49 | -8.615850e-47 |
| Msa0612390 | Msa0691290 | 0.814233 | 1.710240e-51 | -8.615850e-47 |
| Msa0612390 | Msa0691900 | 0.822224 | 2.656074e-53 | -8.615850e-47 |
| Msa0612390 | Msa0694840 | 0.812774 | 3.579249e-51 | -8.615850e-47 |
| Msa0612390 | Msa0698490 | 0.823311 | 1.483233e-53 | -8.615850e-47 |
| Msa0612390 | Msa0698660 | 0.823478 | 1.355375e-53 | -8.615850e-47 |
| Msa0612390 | Msa0698800 | 0.812199 | 4.780136e-51 | -8.615850e-47 |
| Msa0612390 | Msa0715650 | 0.873085 | 1.932390e-67 | -8.615850e-47 |
| Msa0612390 | Msa0719420 | 0.897135 | 1.885420e-76 | -8.615850e-47 |
| Msa0612390 | Msa0729200 | 0.801872 | 7.334036e-49 | -8.615850e-47 |
| Msa0612390 | Msa0738100 | 0.811757 | 5.969097e-51 | -8.615850e-47 |
| Msa0612390 | Msa0753140 | 0.845337 | 4.324464e-59 | -8.615850e-47 |
| Msa0612390 | Msa0763330 | 0.828408 | 9.141270e-55 | -8.615850e-47 |
| Msa0612390 | Msa0769590 | 0.815330 | 9.772227e-52 | -8.615850e-47 |
| Msa0612390 | Msa0772480 | 0.869706 | 2.533174e-66 | -8.615850e-47 |
| Msa0612390 | Msa0789680 | 0.897158 | 1.844553e-76 | -8.615850e-47 |
| Msa0612390 | Msa0793390 | 0.802598 | 5.198774e-49 | -8.615850e-47 |
| Msa0612390 | Msa0798440 | 0.877367 | 6.651642e-69 | -8.615850e-47 |
| Msa0612390 | Msa0802410 | 0.882280 | 1.189505e-70 | -8.615850e-47 |
| Msa0612390 | Msa0806880 | 0.841188 | 5.530408e-58 | -8.615850e-47 |
| Msa0612390 | Msa0819060 | 0.883783 | 3.350291e-71 | -8.615850e-47 |
| Msa0612390 | Msa0830040 | 0.811781 | 5.896138e-51 | -8.615850e-47 |
| Msa0612390 | Msa0830390 | 0.809505 | 1.830223e-50 | -8.615850e-47 |
| Msa0612390 | Msa0830540 | 0.839754 | 1.311212e-57 | -8.615850e-47 |
| Msa0612390 | Msa0859180 | 0.840976 | 6.286871e-58 | -8.615850e-47 |
| Msa0612390 | Msa0887250 | 0.811201 | 7.881250e-51 | -8.615850e-47 |
| Msa0612390 | Msa0901450 | 0.847754 | 9.465991e-60 | -8.615850e-47 |
| Msa0612390 | Msa0913240 | 0.802295 | 6.002375e-49 | -8.615850e-47 |
| Msa0612390 | Msa0925770 | 0.885223 | 9.780865e-72 | -8.615850e-47 |
| Msa0612390 | Msa0933300 | 0.828946 | 6.774949e-55 | -8.615850e-47 |
| Msa0612390 | Msa0945440 | 0.818176 | 2.247057e-52 | -8.615850e-47 |
| Msa0612390 | Msa0963020 | 0.801357 | 9.352623e-49 | -8.615850e-47 |
| Msa0612390 | Msa0966010 | 0.861920 | 7.306317e-64 | -8.615850e-47 |
| Msa0612390 | Msa0970030 | 0.808123 | 3.615290e-50 | -8.615850e-47 |
| Msa0612390 | Msa0989540 | 0.838484 | 2.798667e-57 | -8.615850e-47 |
| Msa0612390 | Msa1001350 | 0.837751 | 4.321710e-57 | -8.615850e-47 |
| Msa0612390 | Msa1006840 | 0.826849 | 2.164931e-54 | -8.615850e-47 |
| Msa0612390 | Msa1014420 | 0.809391 | 1.936740e-50 | -8.615850e-47 |
| Msa0612390 | Msa1019240 | 0.833631 | 4.773728e-56 | -8.615850e-47 |
| Msa0612390 | Msa1019260 | 0.817490 | 3.210545e-52 | -8.615850e-47 |
| Msa0612390 | Msa1029970 | 0.819580 | 1.077771e-52 | -8.615850e-47 |
| Msa0612390 | Msa1041520 | 0.812673 | 3.766407e-51 | -8.615850e-47 |
| Msa0612390 | Msa1043690 | 0.804409 | 2.190589e-49 | -8.615850e-47 |
| Msa0612390 | Msa1055410 | 0.805224 | 1.479812e-49 | -8.615850e-47 |
| Msa0612390 | Msa1072710 | 0.830203 | 3.352727e-55 | -8.615850e-47 |
| Msa0612390 | Msa1077030 | 0.814769 | 1.301592e-51 | -8.615850e-47 |
| Msa0612390 | Msa1081560 | 0.805741 | 1.152865e-49 | -8.615850e-47 |
| Msa0612390 | Msa1084470 | 0.801584 | 8.403860e-49 | -8.615850e-47 |
| Msa0612390 | Msa1088490 | 0.858317 | 8.948749e-63 | -8.615850e-47 |
| Msa0612390 | Msa1093330 | 0.847546 | 1.080192e-59 | -8.615850e-47 |
| Msa0612390 | Msa1104140 | 0.832598 | 8.627706e-56 | -8.615850e-47 |
| Msa0612390 | Msa1104210 | 0.819565 | 1.086364e-52 | -8.615850e-47 |
| Msa0612390 | Msa1120810 | 0.813212 | 2.868860e-51 | -8.615850e-47 |
| Msa0612390 | Msa1126850 | 0.815038 | 1.134365e-51 | -8.615850e-47 |
| Msa0612390 | Msa1127130 | 0.813068 | 3.086261e-51 | -8.615850e-47 |
| Msa0612390 | Msa1133400 | 0.811136 | 8.142739e-51 | -8.615850e-47 |
| Msa0612390 | Msa1135800 | -0.803119 | 4.058246e-49 | -8.615850e-47 |
| Msa0612390 | Msa1135890 | 0.823571 | 1.289018e-53 | -8.615850e-47 |
| Msa0612390 | Msa1165780 | 0.801031 | 1.090744e-48 | -8.615850e-47 |
| Msa0612390 | Msa1166410 | 0.805915 | 1.060025e-49 | -8.615850e-47 |
| Msa0612390 | Msa1166870 | 0.833340 | 5.642838e-56 | -8.615850e-47 |
| Msa0612390 | Msa1179950 | 0.827865 | 1.235686e-54 | -8.615850e-47 |
| Msa0612390 | Msa1179980 | 0.830516 | 2.810863e-55 | -8.615850e-47 |
| Msa0612390 | Msa1197320 | 0.821987 | 3.014321e-53 | -8.615850e-47 |
| Msa0612390 | Msa1209200 | 0.848512 | 5.848496e-60 | -8.615850e-47 |
| Msa0612390 | Msa1209260 | 0.839779 | 1.291720e-57 | -8.615850e-47 |
| Msa0612390 | Msa1209760 | 0.803868 | 2.838895e-49 | -8.615850e-47 |
| Msa0612390 | Msa1214120 | 0.823258 | 1.526336e-53 | -8.615850e-47 |
| Msa0612390 | Msa1250790 | 0.806554 | 7.775328e-50 | -8.615850e-47 |
| Msa0612390 | Msa1257510 | 0.804608 | 1.991210e-49 | -8.615850e-47 |
| Msa0612390 | Msa1265630 | 0.873989 | 9.583314e-68 | -8.615850e-47 |
| Msa0612390 | Msa1270620 | 0.833342 | 5.634008e-56 | -8.615850e-47 |
| Msa0612390 | Msa1270690 | 0.825774 | 3.901512e-54 | -8.615850e-47 |
| Msa0612390 | Msa1282240 | 0.830856 | 2.319844e-55 | -8.615850e-47 |
| Msa0612390 | Msa1302380 | 0.801629 | 8.229256e-49 | -8.615850e-47 |
| Msa0612390 | Msa1306990 | 0.808688 | 2.738210e-50 | -8.615850e-47 |
| Msa0612390 | Msa1331710 | 0.845205 | 4.695948e-59 | -8.615850e-47 |
| Msa0612390 | Msa1349570 | 0.808882 | 2.488852e-50 | -8.615850e-47 |
| Msa0612390 | Msa1355700 | 0.870711 | 1.187115e-66 | -8.615850e-47 |
| Msa0612390 | Msa1356440 | 0.812415 | 4.288124e-51 | -8.615850e-47 |
| Msa0612390 | Msa1359970 | 0.826172 | 3.138190e-54 | -8.615850e-47 |
| Msa0612390 | Msa1363330 | 0.811269 | 7.617562e-51 | -8.615850e-47 |
| Msa0612390 | Msa1366180 | 0.856625 | 2.835484e-62 | -8.615850e-47 |
| Msa0612390 | Msa1369190 | 0.809083 | 2.254941e-50 | -8.615850e-47 |
| Msa0612390 | Msa1374120 | 0.805386 | 1.368679e-49 | -8.615850e-47 |
| Msa0612390 | Msa1386600 | 0.812157 | 4.882620e-51 | -8.615850e-47 |
| Msa0612390 | Msa1387410 | 0.831810 | 1.351895e-55 | -8.615850e-47 |
| Msa0612390 | Msa1394290 | 0.840024 | 1.114981e-57 | -8.615850e-47 |
| Msa0612390 | Msa1413500 | 0.845744 | 3.354444e-59 | -8.615850e-47 |
| Msa0612390 | Msa1432700 | 0.813206 | 2.877863e-51 | -8.615850e-47 |
| Msa0612390 | Msa1436520 | 0.823512 | 1.330781e-53 | -8.615850e-47 |
| Msa0612390 | Msa1444310 | 0.800410 | 1.459976e-48 | -8.615850e-47 |
| Msa0612390 | Msa1457920 | 0.837487 | 5.050823e-57 | -8.615850e-47 |
| Msa0127310 | Msa0612390 | 0.809930 | 1.482924e-50 | -8.615850e-47 |
| Msa0137550 | Msa0612390 | 0.858176 | 9.856971e-63 | -8.615850e-47 |
| Msa0146340 | Msa0612390 | 0.815671 | 8.204052e-52 | -8.615850e-47 |
| Msa0146770 | Msa0612390 | 0.860231 | 2.386674e-63 | -8.615850e-47 |
| Msa0165950 | Msa0612390 | 0.834794 | 2.439762e-56 | -8.615850e-47 |
| Msa0169300 | Msa0612390 | 0.817439 | 3.295540e-52 | -8.615850e-47 |
| Msa0172970 | Msa0612390 | 0.801372 | 9.288710e-49 | -8.615850e-47 |
| Msa0189300 | Msa0612390 | 0.867094 | 1.762246e-65 | -8.615850e-47 |
| Msa0214710 | Msa0612390 | 0.803510 | 3.367813e-49 | -8.615850e-47 |
| Msa0226470 | Msa0612390 | 0.840450 | 8.634000e-58 | -8.615850e-47 |
| Msa0227400 | Msa0612390 | 0.806796 | 6.912970e-50 | -8.615850e-47 |
| Msa0228120 | Msa0612390 | 0.818179 | 2.243614e-52 | -8.615850e-47 |
| Msa0228170 | Msa0612390 | 0.818400 | 1.999822e-52 | -8.615850e-47 |
| Msa0229170 | Msa0612390 | 0.808453 | 3.074293e-50 | -8.615850e-47 |
| Msa0231100 | Msa0612390 | 0.805530 | 1.277018e-49 | -8.615850e-47 |
| Msa0231660 | Msa0612390 | 0.886370 | 3.627707e-72 | -8.615850e-47 |
| Msa0366890 | Msa0612390 | 0.801967 | 7.013539e-49 | -8.615850e-47 |
| Msa0376690 | Msa0612390 | 0.801692 | 7.985726e-49 | -8.615850e-47 |
| Msa0384880 | Msa0612390 | 0.803835 | 2.884374e-49 | -8.615850e-47 |
| Msa0385580 | Msa0612390 | 0.807626 | 4.610559e-50 | -8.615850e-47 |
| Msa0397540 | Msa0612390 | 0.801959 | 7.040738e-49 | -8.615850e-47 |
| Msa0414800 | Msa0612390 | 0.800847 | 1.189292e-48 | -8.615850e-47 |
| Msa0419520 | Msa0612390 | 0.834264 | 3.313691e-56 | -8.615850e-47 |
| Msa0443390 | Msa0612390 | 0.807619 | 4.626255e-50 | -8.615850e-47 |
| Msa0458060 | Msa0612390 | 0.822726 | 2.029872e-53 | -8.615850e-47 |
| Msa0465550 | Msa0612390 | 0.831175 | 1.937509e-55 | -8.615850e-47 |
| Msa0482130 | Msa0612390 | 0.821538 | 3.827589e-53 | -8.615850e-47 |
| Msa0262480 | Msa0612390 | 0.808119 | 3.621628e-50 | -8.615850e-47 |
| Msa0289580 | Msa0612390 | 0.800983 | 1.115588e-48 | -8.615850e-47 |
| Msa0289610 | Msa0612390 | 0.809987 | 1.441920e-50 | -8.615850e-47 |
| Msa0291520 | Msa0612390 | 0.814293 | 1.658556e-51 | -8.615850e-47 |
| Msa0300350 | Msa0612390 | 0.821084 | 4.872345e-53 | -8.615850e-47 |
| Msa0306690 | Msa0612390 | 0.805646 | 1.207490e-49 | -8.615850e-47 |
| Msa0309750 | Msa0612390 | 0.811353 | 7.303819e-51 | -8.615850e-47 |
| Msa0321640 | Msa0612390 | 0.815529 | 8.821161e-52 | -8.615850e-47 |
| Msa0327300 | Msa0612390 | 0.802628 | 5.126278e-49 | -8.615850e-47 |
| Msa0327330 | Msa0612390 | 0.806268 | 8.934086e-50 | -8.615850e-47 |
| Msa0337650 | Msa0612390 | 0.822330 | 2.509690e-53 | -8.615850e-47 |
| Msa0341040 | Msa0612390 | 0.823457 | 1.371254e-53 | -8.615850e-47 |
| Msa0486650 | Msa0612390 | 0.810419 | 1.163372e-50 | -8.615850e-47 |
| Msa0489410 | Msa0612390 | 0.809932 | 1.481517e-50 | -8.615850e-47 |
| Msa0511490 | Msa0612390 | 0.820842 | 5.538207e-53 | -8.615850e-47 |
| Msa0526540 | Msa0612390 | 0.813335 | 2.697010e-51 | -8.615850e-47 |
| Msa0534900 | Msa0612390 | 0.818057 | 2.390672e-52 | -8.615850e-47 |
| Msa0542090 | Msa0612390 | 0.802780 | 4.768184e-49 | -8.615850e-47 |
| Msa0542130 | Msa0612390 | 0.806225 | 9.121579e-50 | -8.615850e-47 |
| Msa0550540 | Msa0612390 | 0.830733 | 2.487206e-55 | -8.615850e-47 |
| Msa0550570 | Msa0612390 | 0.825858 | 3.726431e-54 | -8.615850e-47 |
| Msa0554290 | Msa0612390 | 0.841884 | 3.625141e-58 | -8.615850e-47 |
| Msa0556790 | Msa0612390 | 0.815432 | 9.274801e-52 | -8.615850e-47 |
| Msa0571920 | Msa0612390 | 0.805216 | 1.485661e-49 | -8.615850e-47 |
| Msa0576940 | Msa0612390 | 0.816148 | 6.419844e-52 | -8.615850e-47 |
| Msa0581280 | Msa0612390 | 0.856874 | 2.394703e-62 | -8.615850e-47 |
| Msa0600600 | Msa0612390 | 0.812640 | 3.829880e-51 | -8.615850e-47 |
| Msa0601150 | Msa0612390 | 0.815975 | 7.019685e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0612390 | MtrunA17_Chr4g0038221 | 98.239 | 284 | 4 | 1 | 5 | 287 | 69 | 352 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0612390 | AT5G61770.3 | 77.637 | 237 | 53 | 0 | 5 | 241 | 67 | 303 | 4.13e-138 | 394 |
| Msa0612390 | AT5G61770.2 | 77.637 | 237 | 53 | 0 | 5 | 241 | 67 | 303 | 4.13e-138 | 394 |
| Msa0612390 | AT5G61770.1 | 73.462 | 260 | 65 | 1 | 5 | 264 | 67 | 322 | 4.70e-133 | 380 |
Find 50 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTCCTCTTCGACGAATT+TGG | 0.262207 | 4_2:-60860607 | Msa0612390:intron |
| CTCTTCATCTTCATTATCAT+TGG | 0.273538 | 4_2:+60859838 | None:intergenic |
| AATGAACAACGAAAACTTTC+CGG | 0.311191 | 4_2:+60859762 | None:intergenic |
| GCCATCAAGTTCCTGATCTA+AGG | 0.340037 | 4_2:-60861369 | Msa0612390:CDS |
| AGAGACTTTCTGAATGTTGC+TGG | 0.344183 | 4_2:-60862327 | Msa0612390:CDS |
| GGATGACTCTTCAACTAGTT+AGG | 0.382251 | 4_2:-60860654 | Msa0612390:CDS |
| TCTGAATGTTGCTGGACCTA+TGG | 0.387257 | 4_2:-60862319 | Msa0612390:CDS |
| ATTCGCTTTGAAACACCTAT+AGG | 0.388518 | 4_2:+60861409 | None:intergenic |
| TCCTTAGATCAGGAACTTGA+TGG | 0.390780 | 4_2:+60861368 | None:intergenic |
| TGATTTGTAAGGGCTGGTTA+TGG | 0.404504 | 4_2:-60860790 | Msa0612390:intron |
| TGAAGATGAAGAGCTTGATT+AGG | 0.405051 | 4_2:-60859828 | Msa0612390:exon |
| GTGACTTTGTCTAGTAATCT+TGG | 0.411075 | 4_2:-60860733 | Msa0612390:CDS |
| AATTAAGCAACACAATCCTT+TGG | 0.413513 | 4_2:+60861485 | None:intergenic |
| TCTTCATCTTCATTATCATT+GGG | 0.414299 | 4_2:+60859839 | None:intergenic |
| TCAATTAGATTACAACCTAT+AGG | 0.417293 | 4_2:-60861424 | Msa0612390:CDS |
| ATTGAGAAGGGACTGTGTTC+TGG | 0.430812 | 4_2:-60860631 | Msa0612390:CDS |
| CTGAATGTTGCTGGACCTAT+GGG | 0.440731 | 4_2:-60862318 | Msa0612390:CDS |
| AATGATGAAGAAGATTTAGA+AGG | 0.444497 | 4_2:-60859899 | Msa0612390:CDS |
| TAAAACTTCACCTTACTTGA+GGG | 0.447002 | 4_2:-60862265 | Msa0612390:CDS |
| TCTTGAAGATTCCTTAGATC+AGG | 0.447271 | 4_2:+60861358 | None:intergenic |
| CTAAAACTTCACCTTACTTG+AGG | 0.478099 | 4_2:-60862266 | Msa0612390:CDS |
| ATGTAAGAGTAGGTCCTTGT+GGG | 0.499307 | 4_2:+60862232 | None:intergenic |
| GCTGTCAGACTTCAAGAGAT+TGG | 0.502359 | 4_2:-60860682 | Msa0612390:CDS |
| ACTAGTTGAAGAGTCATCCT+TGG | 0.508593 | 4_2:+60860658 | None:intergenic |
| GTAGTTGCAACCCTCAAGTA+AGG | 0.522894 | 4_2:+60862255 | None:intergenic |
| AGAAAGTGAAGCAGATGATG+AGG | 0.552650 | 4_2:-60860764 | Msa0612390:CDS |
| TCAGTGGTGATTTACCTCTA+CGG | 0.556377 | 4_2:-60861659 | Msa0612390:CDS |
| TCAACTAGTTAGGATTGAGA+AGG | 0.559747 | 4_2:-60860644 | Msa0612390:CDS |
| AGGAAATGTGTGACACCCAT+AGG | 0.559784 | 4_2:+60862303 | None:intergenic |
| TTAAACTCTCGTCTTGCCAA+AGG | 0.560394 | 4_2:-60861501 | Msa0612390:CDS |
| TAAGATACAAGAGTATGCAT+TGG | 0.562852 | 4_2:-60862208 | Msa0612390:CDS |
| GTGCTTTCTGGATTTGTCAG+TGG | 0.563201 | 4_2:-60861675 | Msa0612390:CDS |
| TGTCCAGCAACAGGAAAACC+TGG | 0.576194 | 4_2:-60859953 | Msa0612390:intron |
| AGCAGATGATGAGGCAGCAA+CGG | 0.580635 | 4_2:-60860755 | Msa0612390:CDS |
| ATGTTCGTTGTAAGCCGTAG+AGG | 0.589274 | 4_2:+60861645 | None:intergenic |
| ACAGGAAAACCTGGTGACAA+AGG | 0.598599 | 4_2:-60859944 | Msa0612390:CDS |
| TATGACACTACAAAGATGAA+AGG | 0.598818 | 4_2:-60859790 | Msa0612390:three_prime_UTR |
| TGTATCTTAAATGTAAGAGT+AGG | 0.599693 | 4_2:+60862222 | None:intergenic |
| CAAATTGTAGCAGCAGCCAC+CGG | 0.604846 | 4_2:+60859739 | None:intergenic |
| GAAGATGATGATGATCAAGA+TGG | 0.609303 | 4_2:-60859872 | Msa0612390:CDS |
| CAACTAGTTAGGATTGAGAA+GGG | 0.618382 | 4_2:-60860643 | Msa0612390:CDS |
| GAGCTTGATTAGGAACATAG+TGG | 0.622310 | 4_2:-60859818 | Msa0612390:exon |
| ATGTACCAAATTCGTCGAAG+AGG | 0.628027 | 4_2:+60860602 | None:intergenic |
| AATGTAAGAGTAGGTCCTTG+TGG | 0.629934 | 4_2:+60862231 | None:intergenic |
| ACAAAGATGAAAGGTGCCAC+CGG | 0.633702 | 4_2:-60859781 | Msa0612390:three_prime_UTR |
| GACTTCAAGAGATTGGTCCA+AGG | 0.646494 | 4_2:-60860675 | Msa0612390:CDS |
| AGGGTTGCAACTACCCCACA+AGG | 0.673136 | 4_2:-60862246 | Msa0612390:CDS |
| AAAAGATCTTTAGGGCATCG+AGG | 0.675531 | 4_2:+60862156 | None:intergenic |
| GAACAACGAAAACTTTCCGG+TGG | 0.685958 | 4_2:+60859765 | None:intergenic |
| TGTAAGAGTAGGTCCTTGTG+GGG | 0.701027 | 4_2:+60862233 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTAAAAAGATCTTTA+GGG | + | chr4_2:60859912-60859931 | None:intergenic | 10.0% |
| !!! | GAATTTTTAAAAAGATCTTT+AGG | + | chr4_2:60859913-60859932 | None:intergenic | 15.0% |
| !! | TTGATGTGATAAAATTTAAT+AGG | + | chr4_2:60860131-60860150 | None:intergenic | 15.0% |
| !! | ATTAATAATAATGCAAACAA+TGG | + | chr4_2:60861028-60861047 | None:intergenic | 15.0% |
| !! | TTGTTTGCATTATTATTAAT+TGG | - | chr4_2:60861028-60861047 | Msa0612390:intron | 15.0% |
| !!! | TTTTAGTTTTTGACAATATG+AGG | + | chr4_2:60859777-60859796 | None:intergenic | 20.0% |
| !!! | TCTTTTTAAAAATTCTGCAT+TGG | - | chr4_2:60859918-60859937 | Msa0612390:CDS | 20.0% |
| !! | TTCTAGTGATAGTATTTAAA+TGG | - | chr4_2:60860227-60860246 | Msa0612390:intron | 20.0% |
| !! | TCTAGTGATAGTATTTAAAT+GGG | - | chr4_2:60860228-60860247 | Msa0612390:intron | 20.0% |
| !! | AAATGAAGTAAAATTACTTG+AGG | + | chr4_2:60861496-60861515 | None:intergenic | 20.0% |
| ! | TGTATCTTAAATGTAAGAGT+AGG | + | chr4_2:60859838-60859857 | None:intergenic | 25.0% |
| ! | ATTAGTTAAGACTGCTAAAT+GGG | - | chr4_2:60860102-60860121 | Msa0612390:intron | 25.0% |
| ! | AGCTGATAATAACACAAAAA+TGG | + | chr4_2:60860186-60860205 | None:intergenic | 25.0% |
| ! | CTAGTGATAGTATTTAAATG+GGG | - | chr4_2:60860229-60860248 | Msa0612390:intron | 25.0% |
| ! | AGATCATAATTCATACATAG+TGG | + | chr4_2:60860306-60860325 | None:intergenic | 25.0% |
| ! | CAATTGTTGGAAAAATATTC+TGG | + | chr4_2:60860441-60860460 | None:intergenic | 25.0% |
| ! | TCAATTAGATTACAACCTAT+AGG | - | chr4_2:60860633-60860652 | Msa0612390:CDS | 25.0% |
| ! | ACTTTATGAAGGATTAACAT+GGG | + | chr4_2:60860850-60860869 | None:intergenic | 25.0% |
| ! | TACTTTATGAAGGATTAACA+TGG | + | chr4_2:60860851-60860870 | None:intergenic | 25.0% |
| ! | TTACAACCAAAAAAAAAGAG+AGG | + | chr4_2:60860953-60860972 | None:intergenic | 25.0% |
| !! | TAAAAAAGAAGCATAAGCAA+TGG | + | chr4_2:60861224-60861243 | None:intergenic | 25.0% |
| !!! | TTTTTCACTTGTGATTTGTA+AGG | - | chr4_2:60861256-60861275 | Msa0612390:intron | 25.0% |
| !!! | TTTTCACTTGTGATTTGTAA+GGG | - | chr4_2:60861257-60861276 | Msa0612390:intron | 25.0% |
| !! | ATTACTTGAGGAAAAAGTAT+AGG | + | chr4_2:60861484-60861503 | None:intergenic | 25.0% |
| ! | AGAAAAGAGTTAATAGTCAT+TGG | + | chr4_2:60861675-60861694 | None:intergenic | 25.0% |
| ! | AAAGATGTCAAGAAACTTAA+TGG | + | chr4_2:60861895-60861914 | None:intergenic | 25.0% |
| ! | CTAAGAAAATATTAAAGACG+AGG | + | chr4_2:60861943-60861962 | None:intergenic | 25.0% |
| ! | AAATCACAATACAATGACTT+GGG | + | chr4_2:60861968-60861987 | None:intergenic | 25.0% |
| ! | AAAATCACAATACAATGACT+TGG | + | chr4_2:60861969-60861988 | None:intergenic | 25.0% |
| ! | CAGAAAACAAGAAGAAAAAT+GGG | + | chr4_2:60861997-60862016 | None:intergenic | 25.0% |
| ! | TCAGAAAACAAGAAGAAAAA+TGG | + | chr4_2:60861998-60862017 | None:intergenic | 25.0% |
| ! | AATGATGAAGAAGATTTAGA+AGG | - | chr4_2:60862158-60862177 | Msa0612390:CDS | 25.0% |
| ! | TCTTCATCTTCATTATCATT+GGG | + | chr4_2:60862221-60862240 | None:intergenic | 25.0% |
| ! | CTATTTTGCAGGAAAAGAAA+CGG | - | chr4_2:60859698-60859717 | Msa0612390:three_prime_UTR | 30.0% |
| TAAAACTTCACCTTACTTGA+GGG | - | chr4_2:60859792-60859811 | Msa0612390:three_prime_UTR | 30.0% | |
| ! | TAAGATACAAGAGTATGCAT+TGG | - | chr4_2:60859849-60859868 | Msa0612390:CDS | 30.0% |
| ! | TTAACCTTTTATTCCTATCG+CGG | - | chr4_2:60860059-60860078 | Msa0612390:intron | 30.0% |
| CATTAGTTAAGACTGCTAAA+TGG | - | chr4_2:60860101-60860120 | Msa0612390:intron | 30.0% | |
| TCACGTTAGATAACTACTAA+TGG | + | chr4_2:60860334-60860353 | None:intergenic | 30.0% | |
| !! | ACAGTTTTAACGTCAATTGT+TGG | + | chr4_2:60860454-60860473 | None:intergenic | 30.0% |
| AATTAAGCAACACAATCCTT+TGG | + | chr4_2:60860575-60860594 | None:intergenic | 30.0% | |
| !!! | AGACTAAGCTCATTGATTTT+CGG | - | chr4_2:60860604-60860623 | Msa0612390:intron | 30.0% |
| AAATGAGCAAGTATCTTACT+TGG | + | chr4_2:60860742-60860761 | None:intergenic | 30.0% | |
| !!! | CATCATCCTCTCTTTTTTTT+TGG | - | chr4_2:60860944-60860963 | Msa0612390:intron | 30.0% |
| !!! | TTTTTTTTGGTTGTAACTCG+TGG | - | chr4_2:60860957-60860976 | Msa0612390:intron | 30.0% |
| ! | TGTTTGGATTAATGGGTAAT+GGG | - | chr4_2:60860994-60861013 | Msa0612390:intron | 30.0% |
| TATATCTTCCTTTCTCAATC+AGG | + | chr4_2:60861077-60861096 | None:intergenic | 30.0% | |
| GTTTACTTCTGAATGACTTT+GGG | + | chr4_2:60861174-60861193 | None:intergenic | 30.0% | |
| TGTTTACTTCTGAATGACTT+TGG | + | chr4_2:60861175-60861194 | None:intergenic | 30.0% | |
| TTTGCACAAACGTTCAAAAA+TGG | + | chr4_2:60861598-60861617 | None:intergenic | 30.0% | |
| ! | AAACTTAATGGAGTTTTACG+AGG | + | chr4_2:60861883-60861902 | None:intergenic | 30.0% |
| CTCTTCATCTTCATTATCAT+TGG | + | chr4_2:60862222-60862241 | None:intergenic | 30.0% | |
| TATGACACTACAAAGATGAA+AGG | - | chr4_2:60862267-60862286 | Msa0612390:CDS | 30.0% | |
| AATGAACAACGAAAACTTTC+CGG | + | chr4_2:60862298-60862317 | None:intergenic | 30.0% | |
| ! | AAAGTTTTCGTTGTTCATTC+CGG | - | chr4_2:60862299-60862318 | Msa0612390:CDS | 30.0% |
| !! | AAACATACTAGATTTTTCGG+CGG | + | chr4_2:60862404-60862423 | None:intergenic | 30.0% |
| ! | CGTTTCTTTTCCTGCAAAAT+AGG | + | chr4_2:60859700-60859719 | None:intergenic | 35.0% |
| CTAAAACTTCACCTTACTTG+AGG | - | chr4_2:60859791-60859810 | Msa0612390:three_prime_UTR | 35.0% | |
| TTGCTAATGAAATGCGAGAA+AGG | - | chr4_2:60860019-60860038 | Msa0612390:intron | 35.0% | |
| TGCTAATGAAATGCGAGAAA+GGG | - | chr4_2:60860020-60860039 | Msa0612390:intron | 35.0% | |
| AGTCTTAACTGATTGCAAAC+GGG | + | chr4_2:60860262-60860281 | None:intergenic | 35.0% | |
| CAGTCTTAACTGATTGCAAA+CGG | + | chr4_2:60860263-60860282 | None:intergenic | 35.0% | |
| GTAGTTATCTAACGTGATGT+TGG | - | chr4_2:60860337-60860356 | Msa0612390:intron | 35.0% | |
| ! | TTTTACCAGATTGTGCTTTC+TGG | - | chr4_2:60860370-60860389 | Msa0612390:intron | 35.0% |
| GTTTAACCTGAAATATACCG+CGG | + | chr4_2:60860542-60860561 | None:intergenic | 35.0% | |
| !! | ATTCGCTTTGAAACACCTAT+AGG | + | chr4_2:60860651-60860670 | None:intergenic | 35.0% |
| TCTTGAAGATTCCTTAGATC+AGG | + | chr4_2:60860702-60860721 | None:intergenic | 35.0% | |
| TGCAATGCTAATGACAGAAA+AGG | + | chr4_2:60860827-60860846 | None:intergenic | 35.0% | |
| CAGACTTGCATACTTTATGA+AGG | + | chr4_2:60860861-60860880 | None:intergenic | 35.0% | |
| ! | TGTAACTCGTGGTTTTTCTA+AGG | - | chr4_2:60860968-60860987 | Msa0612390:intron | 35.0% |
| ! | GTAACTCGTGGTTTTTCTAA+GGG | - | chr4_2:60860969-60860988 | Msa0612390:intron | 35.0% |
| ! | TAAGGGTGTGTTTGGATTAA+TGG | - | chr4_2:60860986-60861005 | Msa0612390:intron | 35.0% |
| ! | AAGGGTGTGTTTGGATTAAT+GGG | - | chr4_2:60860987-60861006 | Msa0612390:intron | 35.0% |
| ! | GTGTTTGGATTAATGGGTAA+TGG | - | chr4_2:60860993-60861012 | Msa0612390:intron | 35.0% |
| AATATCAGCCTGATTGAGAA+AGG | - | chr4_2:60861066-60861085 | Msa0612390:intron | 35.0% | |
| GTGACTTTGTCTAGTAATCT+TGG | - | chr4_2:60861324-60861343 | Msa0612390:intron | 35.0% | |
| TCAACTAGTTAGGATTGAGA+AGG | - | chr4_2:60861413-60861432 | Msa0612390:CDS | 35.0% | |
| CAACTAGTTAGGATTGAGAA+GGG | - | chr4_2:60861414-60861433 | Msa0612390:CDS | 35.0% | |
| ! | CTATCATCTTTTACTGTCTC+AGG | - | chr4_2:60861546-60861565 | Msa0612390:intron | 35.0% |
| CGAAATCATACACATGGATT+GGG | + | chr4_2:60861762-60861781 | None:intergenic | 35.0% | |
| ACGAAATCATACACATGGAT+TGG | + | chr4_2:60861763-60861782 | None:intergenic | 35.0% | |
| AATCCATGTGTATGATTTCG+TGG | - | chr4_2:60861762-60861781 | Msa0612390:intron | 35.0% | |
| ! | CTTCACTCTTGTTATCTTTC+TGG | - | chr4_2:60861823-60861842 | Msa0612390:intron | 35.0% |
| CAGATACAAAAGAGATGAGA+GGG | + | chr4_2:60862052-60862071 | None:intergenic | 35.0% | |
| TCAGATACAAAAGAGATGAG+AGG | + | chr4_2:60862053-60862072 | None:intergenic | 35.0% | |
| ! | GAAGATGATGATGATCAAGA+TGG | - | chr4_2:60862185-60862204 | Msa0612390:CDS | 35.0% |
| TGAAGATGAAGAGCTTGATT+AGG | - | chr4_2:60862229-60862248 | Msa0612390:CDS | 35.0% | |
| ! | TCTCATGTCTCCTATTTTGC+AGG | - | chr4_2:60859687-60859706 | Msa0612390:three_prime_UTR | 40.0% |
| AGAGACTTTCTGAATGTTGC+TGG | - | chr4_2:60859730-60859749 | Msa0612390:three_prime_UTR | 40.0% | |
| ATGTAAGAGTAGGTCCTTGT+GGG | + | chr4_2:60859828-60859847 | None:intergenic | 40.0% | |
| AATGTAAGAGTAGGTCCTTG+TGG | + | chr4_2:60859829-60859848 | None:intergenic | 40.0% | |
| !! | AAAAGATCTTTAGGGCATCG+AGG | + | chr4_2:60859904-60859923 | None:intergenic | 40.0% |
| TTCACCGCGATAGGAATAAA+AGG | + | chr4_2:60860066-60860085 | None:intergenic | 40.0% | |
| CTATCGCGGTGAAGAATTAA+GGG | - | chr4_2:60860073-60860092 | Msa0612390:intron | 40.0% | |
| ! | CAAATCCAGAAAGCACAATC+TGG | + | chr4_2:60860378-60860397 | None:intergenic | 40.0% |
| TCAGTGGTGATTTACCTCTA+CGG | - | chr4_2:60860398-60860417 | Msa0612390:intron | 40.0% | |
| TTAAACTCTCGTCTTGCCAA+AGG | - | chr4_2:60860556-60860575 | Msa0612390:intron | 40.0% | |
| TCCTTAGATCAGGAACTTGA+TGG | + | chr4_2:60860692-60860711 | None:intergenic | 40.0% | |
| !! | GGTTTTTCTAAGGGTGTGTT+TGG | - | chr4_2:60860978-60860997 | Msa0612390:intron | 40.0% |
| !! | TGATTTGTAAGGGCTGGTTA+TGG | - | chr4_2:60861267-60861286 | Msa0612390:intron | 40.0% |
| AGAAAGTGAAGCAGATGATG+AGG | - | chr4_2:60861293-60861312 | Msa0612390:intron | 40.0% | |
| ACTAGTTGAAGAGTCATCCT+TGG | + | chr4_2:60861402-60861421 | None:intergenic | 40.0% | |
| GGATGACTCTTCAACTAGTT+AGG | - | chr4_2:60861403-60861422 | Msa0612390:CDS | 40.0% | |
| ATGTACCAAATTCGTCGAAG+AGG | + | chr4_2:60861458-60861477 | None:intergenic | 40.0% | |
| GACGAGGAAAGAAAAGAACA+AGG | + | chr4_2:60861927-60861946 | None:intergenic | 40.0% | |
| ! | TCAGTTTTTCCTTTGTCACC+AGG | + | chr4_2:60862125-60862144 | None:intergenic | 40.0% |
| GAGCTTGATTAGGAACATAG+TGG | - | chr4_2:60862239-60862258 | Msa0612390:CDS | 40.0% | |
| TCTGAATGTTGCTGGACCTA+TGG | - | chr4_2:60859738-60859757 | Msa0612390:three_prime_UTR | 45.0% | |
| CTGAATGTTGCTGGACCTAT+GGG | - | chr4_2:60859739-60859758 | Msa0612390:three_prime_UTR | 45.0% | |
| AGGAAATGTGTGACACCCAT+AGG | + | chr4_2:60859757-60859776 | None:intergenic | 45.0% | |
| GTAGTTGCAACCCTCAAGTA+AGG | + | chr4_2:60859805-60859824 | None:intergenic | 45.0% | |
| TGTAAGAGTAGGTCCTTGTG+GGG | + | chr4_2:60859827-60859846 | None:intergenic | 45.0% | |
| CCTTAATTCTTCACCGCGAT+AGG | + | chr4_2:60860075-60860094 | None:intergenic | 45.0% | |
| CCTATCGCGGTGAAGAATTA+AGG | - | chr4_2:60860072-60860091 | Msa0612390:intron | 45.0% | |
| GTGCTTTCTGGATTTGTCAG+TGG | - | chr4_2:60860382-60860401 | Msa0612390:intron | 45.0% | |
| ATGTTCGTTGTAAGCCGTAG+AGG | + | chr4_2:60860415-60860434 | None:intergenic | 45.0% | |
| CTGAAATATACCGCGGCATT+AGG | + | chr4_2:60860535-60860554 | None:intergenic | 45.0% | |
| CTAATGCCGCGGTATATTTC+AGG | - | chr4_2:60860533-60860552 | Msa0612390:intron | 45.0% | |
| GCCATCAAGTTCCTGATCTA+AGG | - | chr4_2:60860688-60860707 | Msa0612390:CDS | 45.0% | |
| !! | GGATTAATGGGTAATGGGAC+AGG | - | chr4_2:60860999-60861018 | Msa0612390:intron | 45.0% |
| ! | CACTTGTGATTTGTAAGGGC+TGG | - | chr4_2:60861261-60861280 | Msa0612390:intron | 45.0% |
| GCTGTCAGACTTCAAGAGAT+TGG | - | chr4_2:60861375-60861394 | Msa0612390:CDS | 45.0% | |
| ! | GACTTCAAGAGATTGGTCCA+AGG | - | chr4_2:60861382-60861401 | Msa0612390:CDS | 45.0% |
| ATTGAGAAGGGACTGTGTTC+TGG | - | chr4_2:60861426-60861445 | Msa0612390:CDS | 45.0% | |
| GAAGTCCTCTTCGACGAATT+TGG | - | chr4_2:60861450-60861469 | Msa0612390:CDS | 45.0% | |
| ACGCCACGAAATCATACACA+TGG | + | chr4_2:60861768-60861787 | None:intergenic | 45.0% | |
| CGAGGATATGCGATCAGAAA+GGG | + | chr4_2:60861865-60861884 | None:intergenic | 45.0% | |
| ACGAGGATATGCGATCAGAA+AGG | + | chr4_2:60861866-60861885 | None:intergenic | 45.0% | |
| ACAAAAGAGATGAGAGGGAG+AGG | + | chr4_2:60862047-60862066 | None:intergenic | 45.0% | |
| ACAGGAAAACCTGGTGACAA+AGG | - | chr4_2:60862113-60862132 | Msa0612390:intron | 45.0% | |
| !! | ACAAAGATGAAAGGTGCCAC+CGG | - | chr4_2:60862276-60862295 | Msa0612390:CDS | 45.0% |
| GAACAACGAAAACTTTCCGG+TGG | + | chr4_2:60862295-60862314 | None:intergenic | 45.0% | |
| ! | GTTTTCGTTGTTCATTCCGG+TGG | - | chr4_2:60862302-60862321 | Msa0612390:CDS | 45.0% |
| AAGTCGATCTCCTAATGCCG+CGG | - | chr4_2:60860522-60860541 | Msa0612390:intron | 50.0% | |
| AGCAGATGATGAGGCAGCAA+CGG | - | chr4_2:60861302-60861321 | Msa0612390:intron | 50.0% | |
| !! | ACATGGATTGGGTGCTGAAG+TGG | + | chr4_2:60861751-60861770 | None:intergenic | 50.0% |
| ! | GGTTTTCCTGTTGCTGGACA+AGG | + | chr4_2:60862104-60862123 | None:intergenic | 50.0% |
| TGTCCAGCAACAGGAAAACC+TGG | - | chr4_2:60862104-60862123 | Msa0612390:intron | 50.0% | |
| ! | TCACCAGGTTTTCCTGTTGC+TGG | + | chr4_2:60862110-60862129 | None:intergenic | 50.0% |
| CAAATTGTAGCAGCAGCCAC+CGG | + | chr4_2:60862321-60862340 | None:intergenic | 50.0% | |
| AGGGTTGCAACTACCCCACA+AGG | - | chr4_2:60859811-60859830 | Msa0612390:exon | 55.0% | |
| GTTCTGCCTTGTCCAGCAAC+AGG | - | chr4_2:60862095-60862114 | Msa0612390:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 60859655 | 60862424 | 60859655 | ID=Msa0612390;Name=Msa0612390 |
| chr4_2 | mRNA | 60859655 | 60862424 | 60859655 | ID=Msa0612390-mRNA-1;Parent=Msa0612390;Name=Msa0612390-mRNA-1;_AED=0.01;_eAED=0.01;_QI=36|1|1|1|1|1|5|174|287 |
| chr4_2 | exon | 60859655 | 60859968 | 60859655 | ID=Msa0612390-mRNA-1:exon:16437;Parent=Msa0612390-mRNA-1 |
| chr4_2 | exon | 60860608 | 60860801 | 60860608 | ID=Msa0612390-mRNA-1:exon:16436;Parent=Msa0612390-mRNA-1 |
| chr4_2 | exon | 60861337 | 60861524 | 60861337 | ID=Msa0612390-mRNA-1:exon:16435;Parent=Msa0612390-mRNA-1 |
| chr4_2 | exon | 60861608 | 60861700 | 60861608 | ID=Msa0612390-mRNA-1:exon:16434;Parent=Msa0612390-mRNA-1 |
| chr4_2 | exon | 60862140 | 60862424 | 60862140 | ID=Msa0612390-mRNA-1:exon:16433;Parent=Msa0612390-mRNA-1 |
| chr4_2 | five_prime_UTR | 60862389 | 60862424 | 60862389 | ID=Msa0612390-mRNA-1:five_prime_utr;Parent=Msa0612390-mRNA-1 |
| chr4_2 | CDS | 60862140 | 60862388 | 60862140 | ID=Msa0612390-mRNA-1:cds;Parent=Msa0612390-mRNA-1 |
| chr4_2 | CDS | 60861608 | 60861700 | 60861608 | ID=Msa0612390-mRNA-1:cds;Parent=Msa0612390-mRNA-1 |
| chr4_2 | CDS | 60861337 | 60861524 | 60861337 | ID=Msa0612390-mRNA-1:cds;Parent=Msa0612390-mRNA-1 |
| chr4_2 | CDS | 60860608 | 60860801 | 60860608 | ID=Msa0612390-mRNA-1:cds;Parent=Msa0612390-mRNA-1 |
| chr4_2 | CDS | 60859829 | 60859968 | 60859829 | ID=Msa0612390-mRNA-1:cds;Parent=Msa0612390-mRNA-1 |
| chr4_2 | three_prime_UTR | 60859655 | 60859828 | 60859655 | ID=Msa0612390-mRNA-1:three_prime_utr;Parent=Msa0612390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
