AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0097670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097670 MtrunA17_Chr1g0152231 94.358 833 30 1 1 833 1 816 0.0 1594
Msa0097670 MtrunA17_Chr1g0193221 57.359 462 161 8 1 457 1 431 2.11e-166 516
Msa0097670 MtrunA17_Chr4g0035661 43.165 417 194 8 2 412 88 467 5.03e-93 315
Msa0097670 MtrunA17_Chr3g0145071 42.202 436 207 9 2 429 98 496 1.27e-92 314
Msa0097670 MtrunA17_Chr7g0258991 40.920 435 220 8 2 429 72 476 1.48e-87 299
Msa0097670 MtrunA17_Chr6g0483701 40.553 434 194 11 2 422 29 411 8.85e-82 282
Msa0097670 MtrunA17_Chr5g0405181 40.863 394 186 9 2 383 19 377 6.96e-78 271
Msa0097670 MtrunA17_Chr8g0372171 40.464 388 196 6 2 383 18 376 1.84e-77 271
Msa0097670 MtrunA17_Chr4g0070001 39.336 422 201 8 2 421 142 510 3.86e-76 268
Msa0097670 MtrunA17_Chr3g0132921 37.644 433 229 15 2 417 8 416 4.41e-75 254
Msa0097670 MtrunA17_Chr4g0036001 41.406 384 192 8 2 381 23 377 1.65e-74 260
Msa0097670 MtrunA17_Chr3g0142261 39.594 394 204 6 2 390 18 382 3.42e-70 253
Msa0097670 MtrunA17_Chr5g0427481 37.963 432 214 12 6 413 20 421 1.06e-67 245
Msa0097670 MtrunA17_Chr2g0327581 38.462 390 207 7 45 421 95 464 1.37e-66 240
Msa0097670 MtrunA17_Chr7g0266631 41.595 351 169 7 46 380 56 386 1.72e-65 236
Msa0097670 MtrunA17_Chr1g0182151 37.204 422 221 10 46 447 101 498 4.54e-65 236
Msa0097670 MtrunA17_Chr4g0053211 38.200 411 230 12 4 396 13 417 1.86e-64 234
Msa0097670 MtrunA17_Chr1g0178411 42.029 345 170 7 46 377 60 387 1.88e-64 234
Msa0097670 MtrunA17_Chr3g0134191 35.052 485 263 17 2 451 5 472 6.45e-64 232
Msa0097670 MtrunA17_Chr1g0153061 37.143 385 219 10 4 372 9 386 8.28e-64 232
Msa0097670 MtrunA17_Chr3g0122121 38.693 398 187 10 6 380 101 464 5.00e-61 224
Msa0097670 MtrunA17_Chr7g0245931 32.692 468 274 11 3 452 52 496 6.64e-61 222
Msa0097670 MtrunA17_Chr5g0398521 33.191 470 260 13 3 441 57 503 5.19e-60 219
Msa0097670 MtrunA17_Chr8g0377731 36.222 450 211 13 6 416 58 470 8.56e-60 221
Msa0097670 MtrunA17_Chr2g0322291 38.422 393 198 8 4 380 89 453 1.33e-59 221
Msa0097670 MtrunA17_Chr4g0069141 37.468 395 195 12 6 380 156 518 1.64e-59 221
Msa0097670 MtrunA17_Chr4g0045381 38.814 371 181 10 6 358 196 538 3.64e-56 211
Msa0097670 MtrunA17_Chr4g0062291 34.890 364 189 7 3 350 123 454 2.01e-55 203
Msa0097670 MtrunA17_Chr2g0307481 33.978 362 192 7 3 350 68 396 3.11e-55 202
Msa0097670 MtrunA17_Chr1g0191851 34.968 469 234 15 4 454 148 563 3.35e-53 198
Msa0097670 MtrunA17_Chr1g0192481 35.128 390 211 12 4 381 59 418 6.22e-51 188
Msa0097670 MtrunA17_Chr1g0195111 35.219 389 213 11 4 382 397 756 1.93e-50 192
Msa0097670 MtrunA17_Chr5g0447041 31.089 505 267 15 4 472 435 894 5.15e-50 191
Msa0097670 MtrunA17_Chr8g0369881 37.013 308 166 6 46 352 918 1198 2.08e-49 189
Msa0097670 MtrunA17_Chr2g0312631 37.394 353 187 10 4 350 385 709 3.20e-49 188
Msa0097670 MtrunA17_Chr7g0272871 34.763 443 217 13 4 420 128 524 3.79e-49 186
Msa0097670 MtrunA17_Chr7g0271961 37.626 396 195 15 4 384 402 760 9.51e-49 186
Msa0097670 MtrunA17_Chr3g0102921 32.265 499 275 16 4 491 439 885 1.61e-48 186
Msa0097670 MtrunA17_Chr5g0407791 37.217 309 164 7 46 352 932 1212 2.71e-48 186
Msa0097670 MtrunA17_Chr2g0280421 34.831 356 188 10 4 346 438 762 4.04e-48 183
Msa0097670 MtrunA17_Chr7g0257301 36.134 357 180 12 46 381 436 765 1.07e-47 183
Msa0097670 MtrunA17_Chr2g0319271 35.411 353 202 9 4 346 400 736 6.06e-47 179
Msa0097670 MtrunA17_Chr4g0042061 34.615 364 191 9 4 347 433 769 7.86e-47 179
Msa0097670 MtrunA17_Chr5g0411971 34.540 359 194 8 36 383 434 762 1.02e-46 180
Msa0097670 MtrunA17_Chr5g0421521 34.278 353 191 8 6 350 377 696 4.52e-46 178
Msa0097670 MtrunA17_Chr5g0421591 34.085 355 193 8 4 350 375 696 2.02e-45 176
Msa0097670 MtrunA17_Chr1g0191181 32.888 374 222 9 4 376 89 434 8.39e-45 171
Msa0097670 MtrunA17_Chr4g0049011 35.370 311 179 8 46 350 324 618 3.30e-44 169
Msa0097670 MtrunA17_Chr3g0101021 31.892 370 209 9 38 387 100 446 4.26e-42 166
Msa0097670 MtrunA17_Chr5g0445211 31.551 374 210 8 6 362 77 421 2.83e-41 164
Msa0097670 MtrunA17_Chr7g0238581 30.000 370 206 10 1 354 23 355 2.03e-38 152
Msa0097670 MtrunA17_Chr2g0331761 32.869 359 197 12 3 351 185 509 5.48e-37 148
Msa0097670 MtrunA17_Chr6g0485471 32.782 363 192 12 3 351 115 439 3.52e-36 145
Msa0097670 MtrunA17_Chr2g0295881 29.424 469 240 18 3 412 197 633 3.83e-35 144
Msa0097670 MtrunA17_Chr4g0067421 31.793 368 200 13 3 351 205 540 5.54e-35 143
Msa0097670 MtrunA17_Chr7g0269681 41.327 196 99 6 186 380 41 221 1.82e-30 126
Msa0097670 MtrunA17_Chr8g0386891 38.318 214 107 6 186 387 4 204 7.21e-30 123
Msa0097670 MtrunA17_Chr8g0367581 29.630 405 239 12 42 437 185 552 9.61e-28 120
Msa0097670 MtrunA17_Chr3g0142841 30.031 323 163 9 47 350 144 422 6.64e-27 118
Msa0097670 MtrunA17_Chr8g0390991 32.374 278 162 9 186 453 4 265 1.03e-22 103
Msa0097670 MtrunA17_Chr6g0484501 42.857 161 80 2 186 346 34 182 1.22e-22 97.8
Msa0097670 MtrunA17_Chr1g0187411 25.641 429 228 14 63 432 185 581 3.76e-21 99.4
Msa0097670 MtrunA17_Chr8g0386901 35.570 149 83 5 4 142 484 629 4.25e-14 76.3
Msa0097670 MtrunA17_Chr7g0269691 33.108 148 92 4 4 145 401 547 1.10e-12 71.6
Msa0097670 MtrunA17_Chr8g0390981 38.318 107 58 5 45 145 559 663 2.79e-11 67.4
Msa0097670 MtrunA17_Chr6g0484511 37.736 106 54 4 45 142 333 434 3.59e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097670 AT1G59540.1 54.333 854 312 19 1 816 1 814 0.0 829
Msa0097670 AT1G59540.2 51.974 760 289 18 95 816 1 722 0.0 684
Msa0097670 AT3G10180.2 52.964 523 205 12 1 516 1 489 2.21e-155 487
Msa0097670 AT3G10180.1 52.964 523 205 12 1 516 1 489 2.32e-155 487
Msa0097670 AT2G21380.2 43.855 415 190 9 4 412 105 482 9.67e-91 309
Msa0097670 AT2G21380.1 43.855 415 190 9 4 412 105 482 9.67e-91 309
Msa0097670 AT4G39050.1 43.373 415 196 8 2 412 97 476 3.67e-90 307
Msa0097670 AT3G12020.4 42.891 422 195 10 2 412 68 454 2.94e-89 303
Msa0097670 AT3G12020.1 42.891 422 195 10 2 412 68 454 2.94e-89 303
Msa0097670 AT3G12020.3 42.891 422 195 10 2 412 68 454 2.18e-88 302
Msa0097670 AT3G12020.2 42.891 422 195 10 2 412 68 454 2.18e-88 302
Msa0097670 AT5G06670.8 40.465 430 221 7 2 429 65 461 1.07e-87 294
Msa0097670 AT5G06670.4 40.465 430 221 7 2 429 65 461 1.07e-87 294
Msa0097670 AT5G06670.7 40.465 430 221 7 2 429 65 461 1.07e-87 294
Msa0097670 AT5G06670.5 40.465 430 221 7 2 429 65 461 1.35e-87 294
Msa0097670 AT5G06670.2 40.465 430 221 7 2 429 65 461 8.33e-86 294
Msa0097670 AT5G06670.3 40.465 430 221 7 2 429 65 461 8.33e-86 294
Msa0097670 AT1G21730.1 43.603 383 180 8 2 380 74 424 5.16e-84 287
Msa0097670 AT5G06670.6 39.636 439 221 8 2 429 65 470 4.62e-83 286
Msa0097670 AT5G06670.1 39.636 439 221 8 2 429 65 470 4.62e-83 286
Msa0097670 AT3G43210.3 39.374 447 229 8 2 444 28 436 4.44e-82 283
Msa0097670 AT3G43210.5 39.374 447 229 8 2 444 28 436 4.44e-82 283
Msa0097670 AT3G43210.2 39.374 447 229 8 2 444 28 436 4.44e-82 283
Msa0097670 AT3G43210.4 39.374 447 229 8 2 444 28 436 4.44e-82 283
Msa0097670 AT3G43210.1 39.374 447 229 8 2 444 28 436 4.44e-82 283
Msa0097670 AT1G18370.1 41.570 433 197 12 2 418 30 422 5.26e-81 281
Msa0097670 AT5G66310.2 37.054 448 229 9 2 425 17 435 2.22e-78 275
Msa0097670 AT5G66310.3 37.054 448 229 9 2 425 17 435 2.22e-78 275
Msa0097670 AT5G66310.1 37.054 448 229 9 2 425 17 435 2.22e-78 275
Msa0097670 AT3G51150.2 40.000 385 196 7 2 380 16 371 7.39e-77 270
Msa0097670 AT3G51150.4 40.000 385 196 7 2 380 16 371 7.39e-77 270
Msa0097670 AT3G51150.3 40.000 385 196 7 2 380 16 371 7.39e-77 270
Msa0097670 AT3G51150.1 40.000 385 196 7 2 380 16 371 7.45e-77 270
Msa0097670 AT4G24170.1 41.099 382 192 8 2 380 5 356 1.53e-76 268
Msa0097670 AT4G24170.2 41.099 382 192 8 2 380 5 356 1.53e-76 268
Msa0097670 AT4G38950.3 38.679 424 225 7 2 421 12 404 4.61e-76 265
Msa0097670 AT4G38950.5 38.679 424 225 7 2 421 12 404 4.61e-76 265
Msa0097670 AT4G38950.4 38.679 424 225 7 2 421 12 404 4.61e-76 265
Msa0097670 AT4G38950.1 38.679 424 225 7 2 421 12 404 4.61e-76 265
Msa0097670 AT4G38950.2 38.679 424 225 7 2 421 12 404 4.61e-76 265
Msa0097670 AT2G21300.2 37.412 425 228 8 2 421 23 414 1.45e-74 261
Msa0097670 AT2G21300.4 37.412 425 228 8 2 421 23 414 1.45e-74 261
Msa0097670 AT2G21300.3 37.412 425 228 8 2 421 23 414 1.45e-74 261
Msa0097670 AT2G21300.1 37.412 425 228 8 2 421 23 414 1.45e-74 261
Msa0097670 AT2G21300.5 37.412 425 228 8 2 421 23 414 1.45e-74 261
Msa0097670 AT2G28620.3 39.487 390 205 7 4 380 51 422 2.59e-71 254
Msa0097670 AT2G28620.2 39.487 390 205 7 4 380 51 422 2.59e-71 254
Msa0097670 AT2G28620.1 39.487 390 205 7 4 380 51 422 3.33e-71 254
Msa0097670 AT5G60930.1 38.479 434 238 14 2 417 5 427 7.08e-71 254
Msa0097670 AT5G60930.2 38.479 434 238 14 2 417 5 427 7.70e-71 255
Msa0097670 AT5G60930.3 38.479 434 238 14 2 417 5 427 7.77e-71 254
Msa0097670 AT5G47820.2 36.259 433 249 11 4 417 12 436 2.01e-68 246
Msa0097670 AT5G47820.1 36.259 433 249 11 4 417 12 436 2.01e-68 246
Msa0097670 AT3G45850.2 40.988 344 176 6 46 380 102 427 1.20e-66 241
Msa0097670 AT3G45850.1 40.988 344 176 6 46 380 102 427 1.20e-66 241
Msa0097670 AT2G36200.1 41.026 351 177 7 46 383 59 392 2.20e-65 237
Msa0097670 AT3G63480.2 40.557 323 158 7 45 359 47 343 3.00e-65 226
Msa0097670 AT2G36200.2 38.575 407 206 10 46 439 59 434 3.06e-65 236
Msa0097670 AT3G63480.1 40.061 327 158 8 45 359 47 347 2.47e-63 221
Msa0097670 AT2G37420.1 39.542 349 180 8 46 383 95 423 2.92e-63 231
Msa0097670 AT2G37420.2 39.542 349 180 8 46 383 95 423 2.92e-63 231
Msa0097670 AT4G14150.1 35.794 447 220 10 6 415 94 510 1.87e-61 226
Msa0097670 AT3G54870.3 36.220 381 202 9 35 406 139 487 2.83e-60 221
Msa0097670 AT3G54870.1 36.220 381 202 9 35 406 139 487 2.88e-60 221
Msa0097670 AT3G23670.2 38.674 362 174 8 41 381 126 460 4.39e-60 221
Msa0097670 AT3G54870.2 36.220 381 202 9 35 406 139 487 6.17e-60 221
Msa0097670 AT3G23670.1 38.674 362 174 8 41 381 126 460 8.58e-60 221
Msa0097670 AT3G50240.2 34.978 446 238 12 4 420 26 448 8.63e-60 220
Msa0097670 AT3G19050.1 38.381 383 192 9 6 371 196 551 1.26e-59 222
Msa0097670 AT3G50240.4 34.978 446 238 12 4 420 26 448 5.02e-59 218
Msa0097670 AT3G50240.1 34.978 446 238 12 4 420 26 448 5.04e-59 218
Msa0097670 AT3G17360.2 39.730 370 179 9 6 358 171 513 7.58e-59 219
Msa0097670 AT3G17360.3 39.730 370 179 9 6 358 171 513 8.61e-59 219
Msa0097670 AT3G17360.1 39.730 370 179 9 6 358 171 513 9.41e-59 219
Msa0097670 AT1G12430.1 35.025 394 211 10 3 376 70 438 1.93e-57 213
Msa0097670 AT3G44050.1 38.832 394 195 10 4 380 94 458 1.95e-57 214
Msa0097670 AT1G12430.2 35.025 394 211 10 3 376 70 438 2.08e-57 213
Msa0097670 AT1G01950.2 35.550 391 213 9 3 376 60 428 1.17e-55 207
Msa0097670 AT1G01950.1 35.550 391 213 9 3 376 60 428 1.27e-55 207
Msa0097670 AT1G01950.3 35.550 391 213 9 3 376 60 428 2.07e-55 206
Msa0097670 AT1G18550.1 35.537 363 187 8 3 350 151 481 2.10e-55 204
Msa0097670 AT3G49650.1 36.152 343 184 6 46 380 66 381 6.99e-55 204
Msa0097670 AT5G27550.2 34.873 433 230 13 4 420 133 529 4.74e-53 198
Msa0097670 AT5G27550.1 34.873 433 230 13 4 420 133 529 4.74e-53 198
Msa0097670 AT2G47500.2 35.561 419 224 14 4 411 400 783 1.93e-52 198
Msa0097670 AT2G47500.1 35.561 419 224 14 4 411 400 783 2.34e-52 198
Msa0097670 AT3G44730.2 33.874 493 257 18 46 510 468 919 9.40e-52 196
Msa0097670 AT3G44730.3 33.874 493 257 18 46 510 468 919 9.40e-52 196
Msa0097670 AT3G44730.1 33.874 493 257 18 46 510 423 874 1.09e-51 196
Msa0097670 AT3G44730.4 33.874 493 257 18 46 510 423 874 1.09e-51 196
Msa0097670 AT5G65930.1 38.141 312 157 7 46 352 930 1210 1.11e-51 196
Msa0097670 AT5G65930.2 38.141 312 157 7 46 352 931 1211 1.17e-51 196
Msa0097670 AT5G65930.3 38.141 312 157 7 46 352 937 1217 1.28e-51 196
Msa0097670 AT1G72250.2 32.444 487 279 13 45 526 544 985 3.75e-51 195
Msa0097670 AT1G72250.4 32.444 487 279 13 45 526 555 996 3.76e-51 195
Msa0097670 AT1G72250.3 32.444 487 279 13 45 526 556 997 4.01e-51 195
Msa0097670 AT1G72250.1 32.444 487 279 13 45 526 535 976 4.20e-51 195
Msa0097670 AT1G55550.1 32.870 432 257 9 4 435 92 490 5.86e-50 190
Msa0097670 AT1G09170.4 38.158 380 187 15 4 369 435 780 1.41e-49 189
Msa0097670 AT1G09170.5 38.158 380 187 15 4 369 435 780 1.74e-49 189
Msa0097670 AT1G09170.2 38.158 380 187 15 4 369 435 780 2.32e-49 188
Msa0097670 AT1G09170.3 37.895 380 188 15 4 369 435 780 2.37e-49 187
Msa0097670 AT1G09170.7 37.895 380 188 15 4 369 435 780 2.37e-49 187
Msa0097670 AT5G54670.3 36.261 353 195 10 4 346 337 669 6.25e-49 185
Msa0097670 AT2G22610.1 32.900 462 240 14 4 432 418 842 7.33e-49 187
Msa0097670 AT2G22610.3 32.900 462 240 14 4 432 419 843 7.34e-49 187
Msa0097670 AT2G22610.2 32.900 462 240 14 4 432 418 842 9.11e-49 187
Msa0097670 AT3G51150.5 45.089 224 114 4 157 380 4 218 1.53e-48 186
Msa0097670 AT5G54670.1 36.261 353 195 10 4 346 397 729 2.01e-48 184
Msa0097670 AT5G54670.2 36.261 353 195 10 4 346 397 729 2.01e-48 184
Msa0097670 AT3G10310.1 36.111 396 187 17 4 381 364 711 2.21e-48 186
Msa0097670 AT3G10310.2 36.111 396 187 16 4 381 364 711 2.39e-48 186
Msa0097670 AT4G05190.1 35.876 354 199 11 4 346 429 765 4.66e-48 183
Msa0097670 AT4G05190.2 35.876 354 199 11 4 346 416 752 5.19e-48 183
Msa0097670 AT4G27180.1 36.544 353 194 10 4 346 388 720 1.16e-47 182
Msa0097670 AT4G27180.2 36.544 353 194 10 4 346 388 720 1.16e-47 182
Msa0097670 AT4G21270.1 35.511 352 203 8 4 346 432 768 6.19e-47 180
Msa0097670 AT3G50240.3 37.249 349 200 10 86 420 3 346 1.04e-46 181
Msa0097670 AT5G27000.1 35.942 345 169 12 46 380 440 742 2.93e-46 179
Msa0097670 AT5G42490.1 37.884 293 150 6 2 290 8 272 4.87e-46 179
Msa0097670 AT5G42490.2 37.884 293 150 6 2 290 8 272 4.88e-46 179
Msa0097670 AT1G63640.3 38.264 311 150 10 46 346 518 796 1.04e-45 178
Msa0097670 AT1G63640.1 38.264 311 150 10 46 346 518 796 1.17e-45 177
Msa0097670 AT1G63640.4 38.264 311 150 10 46 346 518 796 1.17e-45 177
Msa0097670 AT1G63640.5 38.264 311 150 10 46 346 508 786 1.19e-45 177
Msa0097670 AT1G63640.2 38.264 311 143 10 46 346 518 789 2.74e-45 176
Msa0097670 AT5G27950.1 34.513 339 188 8 42 379 115 420 1.08e-44 171
Msa0097670 AT1G73860.1 34.957 349 184 10 46 377 555 877 1.34e-43 171
Msa0097670 AT5G41310.1 36.275 306 145 8 46 346 468 728 2.17e-43 170
Msa0097670 AT1G73860.2 34.957 349 184 10 46 377 472 794 2.19e-43 170
Msa0097670 AT1G18410.4 30.357 448 262 12 4 431 633 1050 2.69e-43 170
Msa0097670 AT1G18410.3 33.079 393 216 11 4 376 490 855 5.15e-43 169
Msa0097670 AT1G18410.2 33.079 393 216 11 4 376 490 855 5.15e-43 169
Msa0097670 AT1G18410.1 30.357 448 254 12 4 431 633 1042 1.95e-42 167
Msa0097670 AT1G01950.4 36.570 309 160 7 82 376 1 287 3.59e-42 165
Msa0097670 AT1G18410.5 33.903 351 189 9 4 346 480 795 4.32e-42 166
Msa0097670 AT1G09170.6 38.438 333 158 14 4 323 435 733 4.68e-42 165
Msa0097670 AT1G09170.8 38.438 333 158 14 4 323 435 733 4.68e-42 165
Msa0097670 AT3G20150.1 31.300 377 198 12 6 359 107 445 6.55e-40 160
Msa0097670 AT3G20150.2 31.300 377 198 12 6 359 107 445 7.70e-40 159
Msa0097670 AT1G09170.1 35.389 373 171 16 4 369 435 744 4.23e-39 157
Msa0097670 AT3G16060.1 32.312 359 199 12 3 351 169 493 9.75e-38 151
Msa0097670 AT3G16630.2 33.609 363 199 12 3 351 193 527 1.81e-37 151
Msa0097670 AT3G16630.1 33.609 363 199 12 3 351 193 527 1.81e-37 151
Msa0097670 AT5G02370.1 30.696 316 179 7 43 357 71 347 2.11e-36 145
Msa0097670 AT5G27950.2 32.632 285 161 6 95 379 1 254 9.40e-32 130
Msa0097670 AT5G65460.2 26.757 441 266 13 4 429 139 537 3.57e-28 122
Msa0097670 AT5G65460.4 26.757 441 266 13 4 429 139 537 4.57e-28 122
Msa0097670 AT5G65460.6 26.757 441 266 13 4 429 139 537 4.68e-28 122
Msa0097670 AT5G65460.1 26.757 441 266 13 4 429 139 537 4.93e-28 122
Msa0097670 AT5G10470.2 27.363 402 229 13 46 429 185 541 2.60e-26 116
Msa0097670 AT5G10470.1 27.363 402 229 13 46 429 185 541 2.76e-26 116
Msa0097670 AT5G65460.3 26.339 448 266 14 4 429 139 544 7.87e-26 115
Msa0097670 AT4G14330.1 25.661 378 233 11 46 416 89 425 5.61e-22 102
Msa0097670 AT1G20060.10 29.206 315 182 6 47 350 164 448 4.59e-20 96.3
Msa0097670 AT1G20060.8 29.206 315 182 6 47 350 164 448 4.90e-20 96.3
Msa0097670 AT1G20060.4 29.206 315 182 6 47 350 164 448 5.29e-20 96.3
Msa0097670 AT1G20060.5 29.206 315 182 6 47 350 164 448 5.58e-20 96.3
Msa0097670 AT1G20060.3 29.206 315 182 6 47 350 164 448 5.60e-20 96.3
Msa0097670 AT1G20060.6 29.206 315 182 6 47 350 164 448 5.68e-20 96.3
Msa0097670 AT1G20060.2 29.206 315 182 6 47 350 164 448 6.09e-20 95.9
Msa0097670 AT1G20060.9 29.206 315 182 6 47 350 164 448 6.13e-20 95.9
Msa0097670 AT1G20060.7 29.206 315 182 6 47 350 164 448 7.37e-20 95.9
Msa0097670 AT5G65460.5 26.415 318 184 9 123 429 13 291 7.70e-15 79.7

Find 167 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAACCTTCCCCTACTTTA+AGG 0.114949 1_3:-3509403 None:intergenic
AGCTCTCCATTTCTCAATTT+TGG 0.173176 1_3:-3514501 None:intergenic
TCTTGACACCCAAAAGATTT+TGG 0.212371 1_3:-3514542 None:intergenic
ATTTCAGTGCCAAAATCTTT+TGG 0.236228 1_3:+3514533 Msa0097670:CDS
GTTAATTTACTATCACGATA+TGG 0.243218 1_3:-3510124 None:intergenic
TCAGGGACTGCATTTGCTTA+TGG 0.255929 1_3:+3508874 Msa0097670:intron
GTTACAAAGGGCTCTGGTTT+GGG 0.269494 1_3:+3514194 Msa0097670:intron
AACAAAAGCTTGATGATTCT+AGG 0.281256 1_3:+3509953 Msa0097670:CDS
CTTTCAACCATGAGTGAAAT+TGG 0.288084 1_3:+3513021 Msa0097670:CDS
GCCACATTGCTGAAAGATTC+TGG 0.302737 1_3:-3511635 None:intergenic
CAGGGACTGCATTTGCTTAT+GGG 0.302810 1_3:+3508875 Msa0097670:intron
TGTTACAAAGGGCTCTGGTT+TGG 0.309724 1_3:+3514193 Msa0097670:intron
CTGTTCATCATGGACTTTCA+TGG 0.310664 1_3:-3507315 None:intergenic
TCATGGACTTTCATGGCATA+TGG 0.317522 1_3:-3507308 None:intergenic
GGTGCAAATAATGGATGTTT+TGG 0.317765 1_3:-3510179 None:intergenic
TCCATTCAGGGATCTCATGC+TGG 0.325791 1_3:+3510916 Msa0097670:intron
TGCAAATCTATTTGCAGCTT+TGG 0.331515 1_3:+3513044 Msa0097670:CDS
CAGCGGGGAGTATTTGTTGC+AGG 0.334984 1_3:+3509335 Msa0097670:intron
CCGTCAAACAAGCAACTAAT+AGG 0.342212 1_3:+3512758 Msa0097670:CDS
TGGTGCTACGGTGCAAATAA+TGG 0.358480 1_3:-3510188 None:intergenic
ACCACAGCCTCTACCTCTTC+TGG 0.360936 1_3:-3510208 None:intergenic
AGCACTGGCTGTCTTTAAAC+AGG 0.366009 1_3:-3511558 None:intergenic
TTCCACTATTTAGTATGAAA+TGG 0.367613 1_3:+3511075 Msa0097670:intron
CTCATTCACTTGAACACAAT+TGG 0.368194 1_3:-3510366 None:intergenic
CATTATTGACAATTTCTTCT+CGG 0.369652 1_3:-3509361 None:intergenic
GGGGTGGCTGAGAGAAAATT+TGG 0.375033 1_3:+3507281 None:intergenic
TCTAACTCTTCATATGCTTT+CGG 0.376510 1_3:+3507590 Msa0097670:CDS
ATTCCGTCAATGGAAGCTTC+TGG 0.379986 1_3:+3507516 Msa0097670:CDS
CCTATTAGTTGCTTGTTTGA+CGG 0.390784 1_3:-3512758 None:intergenic
AAAAGACACCAAGATGTTCA+TGG 0.396562 1_3:-3514581 None:intergenic
CGGAAATACCCTTCGACAAA+CGG 0.403460 1_3:-3507345 None:intergenic
GTTCTAGATCTCCTTAAAGT+AGG 0.415724 1_3:+3509392 Msa0097670:CDS
GTTTCTTCAGATTCCGTCAA+TGG 0.415988 1_3:+3507506 Msa0097670:CDS
TAGAATTTAGTAGATCTTGC+TGG 0.419494 1_3:+3509869 Msa0097670:intron
AACACAATTGGTGATGCGTT+TGG 0.428947 1_3:-3510354 None:intergenic
TTAATTTACTATCACGATAT+GGG 0.428949 1_3:-3510123 None:intergenic
TTAAGACCAAAATTGAGAAA+TGG 0.434118 1_3:+3514495 Msa0097670:CDS
CATGGACTTTCATGGCATAT+GGG 0.435777 1_3:-3507307 None:intergenic
ATTGCAAATTCATGAGAGTC+TGG 0.440975 1_3:+3509174 Msa0097670:CDS
TTATCAGAAAGCTCAATAAC+AGG 0.442837 1_3:+3513159 Msa0097670:CDS
CCATTCAGGGATCTCATGCT+GGG 0.445695 1_3:+3510917 Msa0097670:intron
TTCTAGATCTCCTTAAAGTA+GGG 0.453841 1_3:+3509393 Msa0097670:CDS
GTGAGACAAATATGAATGTA+AGG 0.454372 1_3:+3509535 Msa0097670:CDS
GGAAGAGGAGGACTACTATC+TGG 0.455017 1_3:-3511614 None:intergenic
CTCTGGTTTGGGAGGAGAAA+CGG 0.457880 1_3:+3514205 Msa0097670:CDS
AAAGTTGTAACTCCCTTTCG+AGG 0.461651 1_3:-3514271 None:intergenic
GGAGCGTGGTAAGCTTGAAA+TGG 0.465250 1_3:+3511096 Msa0097670:CDS
AATCCTCGCCTCAAATATCT+AGG 0.467469 1_3:-3511479 None:intergenic
AAACAGAGATTTGCATTGGA+TGG 0.467595 1_3:+3512976 Msa0097670:intron
GAATAATTTAATTACATCAC+TGG 0.468350 1_3:+3513134 Msa0097670:CDS
ACAGATTCTGATAACCTCAT+AGG 0.470024 1_3:-3512827 None:intergenic
ACAGGAGTTGTATCACTTAG+TGG 0.470293 1_3:-3511749 None:intergenic
GACTGAGAATGATGTGGTAC+TGG 0.471513 1_3:-3511185 None:intergenic
CTTCCAGAAGCTTCCATTGA+CGG 0.477130 1_3:-3507519 None:intergenic
GGGAAGACGTTCACGATGAA+TGG 0.480698 1_3:+3508910 Msa0097670:CDS
CTCTACCTCTTCTGGTGCTA+CGG 0.483389 1_3:-3510200 None:intergenic
CGTATACTCCAACCTGCTCT+TGG 0.484237 1_3:+3510148 Msa0097670:CDS
TGGTAAGCTTGAAATGGAAC+TGG 0.486181 1_3:+3511102 Msa0097670:CDS
TGAAGGTGATTGAAAGCAAA+GGG 0.488492 1_3:+3509692 Msa0097670:intron
TGGGAACTATGCTGCAATCC+AGG 0.489277 1_3:+3513083 Msa0097670:CDS
TTGAACAACAGAAAAGCAAA+TGG 0.489562 1_3:+3507448 Msa0097670:exon
GCTGCTCTCAATGGCTTCAA+TGG 0.492027 1_3:+3507775 Msa0097670:CDS
TGTTTATGAGATTCTCACTA+AGG 0.492427 1_3:+3507741 Msa0097670:CDS
ATCATTCTCGCTGCTCTCAA+TGG 0.492960 1_3:+3507766 Msa0097670:CDS
GCTTGAAATGGAACTGGAAG+AGG 0.495302 1_3:+3511108 Msa0097670:CDS
TAATTCAAGAATTGCCTATG+AGG 0.498435 1_3:+3512813 Msa0097670:CDS
AAATGAAAAGATAAATGAAC+TGG 0.504184 1_3:+3512325 Msa0097670:CDS
CATTGTTCGAGTTTCAGTCT+TGG 0.504826 1_3:+3509753 Msa0097670:CDS
TTGGCATTTCCACCAAGAGC+AGG 0.507442 1_3:-3510160 None:intergenic
TTGTGGGACGAACGACAATC+AGG 0.509085 1_3:+3511213 Msa0097670:CDS
AGAGGAAATCACGTAATCAA+TGG 0.509195 1_3:+3511131 Msa0097670:CDS
AGCAAGAGGTTCTTAAACTC+AGG 0.511662 1_3:+3510947 Msa0097670:CDS
ATTGTAAACCATGAACATCT+TGG 0.513595 1_3:+3514573 Msa0097670:three_prime_UTR
TGCAATTGTGTCAAGCCAAA+GGG 0.513596 1_3:+3514349 Msa0097670:CDS
ATAGGCAATTCTTGAATTAG+CGG 0.515399 1_3:-3512809 None:intergenic
TTTACAGTGAATAGGCACTT+TGG 0.515642 1_3:+3509513 Msa0097670:intron
TGTTGTTCAAACTTTGGAGC+GGG 0.516041 1_3:-3507435 None:intergenic
GTTCACATTGAAGAAACAAA+GGG 0.516944 1_3:+3510308 Msa0097670:CDS
ATTTGCACCAATTTCACTCA+TGG 0.518475 1_3:-3513028 None:intergenic
GATGGAGTACGTTTGAAAGA+AGG 0.520486 1_3:+3509920 Msa0097670:CDS
AATCTATTTGCAGCTTTGGA+AGG 0.521698 1_3:+3513048 Msa0097670:CDS
TTGCTGAAAGATTCTGGAAG+AGG 0.522298 1_3:-3511629 None:intergenic
GAATGGTTGTGAGACGGACC+CGG 0.523087 1_3:+3508927 Msa0097670:CDS
AGAAAATATCCGTTTGTCGA+AGG 0.523459 1_3:+3507336 Msa0097670:five_prime_UTR
TCATTCTCAGTCTCAGATTG+TGG 0.524428 1_3:+3511196 Msa0097670:CDS
ATTGCAAAGACTGGAGCTGA+TGG 0.527407 1_3:+3509902 Msa0097670:CDS
ATCACATACAATATTTAGAA+TGG 0.527414 1_3:+3509566 Msa0097670:CDS
TCCTAAACAGAGATTTGCAT+TGG 0.528814 1_3:+3512972 Msa0097670:intron
CATTCTCAGTCTCAGATTGT+GGG 0.529433 1_3:+3511197 Msa0097670:CDS
CTGCCCGAGGAATCACTCCC+GGG 0.532905 1_3:-3508945 None:intergenic
GAAAATATCCGTTTGTCGAA+GGG 0.534095 1_3:+3507337 Msa0097670:five_prime_UTR
ACTGCCCGAGGAATCACTCC+CGG 0.534724 1_3:-3508946 None:intergenic
TGCTGGGGTGCTCGAGCAAG+AGG 0.535240 1_3:+3510933 Msa0097670:CDS
AGCGGGGAGTATTTGTTGCA+GGG 0.535991 1_3:+3509336 Msa0097670:intron
GTTAGGGACCTAGATATTTG+AGG 0.536811 1_3:+3511471 Msa0097670:intron
CATTTCCACCAAGAGCAGGT+TGG 0.537014 1_3:-3510156 None:intergenic
TAGCTGTTGCCGCTTTAACA+AGG 0.540932 1_3:-3510803 None:intergenic
CAGGAGTTGTATCACTTAGT+GGG 0.543032 1_3:-3511748 None:intergenic
ATACTCCAACCTGCTCTTGG+TGG 0.543213 1_3:+3510151 Msa0097670:CDS
CAGATGCAGCCTTGTTAAAG+CGG 0.545444 1_3:+3510794 Msa0097670:CDS
TTGCAATTGTGTCAAGCCAA+AGG 0.545920 1_3:+3514348 Msa0097670:CDS
GCTTATGGGCAGACAAGCAG+TGG 0.547053 1_3:+3508889 Msa0097670:CDS
AATGGTTGTGAGACGGACCC+GGG 0.547903 1_3:+3508928 Msa0097670:CDS
TCTGAAAGGATTGCAAAGAC+TGG 0.549765 1_3:+3509893 Msa0097670:CDS
CGGACCCGGGAGTGATTCCT+CGG 0.551486 1_3:+3508941 Msa0097670:CDS
AGTTAGAGAGAGGAGTTCCA+TGG 0.554555 1_3:-3507574 None:intergenic
GCATATGAAGAGTTAGAGAG+AGG 0.555818 1_3:-3507584 None:intergenic
TGTTATTAATAAATTAAGTG+AGG 0.556487 1_3:+3509979 Msa0097670:CDS
AAAGATACGAAAGCCTCGAA+AGG 0.559844 1_3:+3514258 Msa0097670:CDS
AACGAGAGGACGAACTCTAA+CGG 0.559929 1_3:-3507486 None:intergenic
GACATTAATAGTACATCTCA+AGG 0.561057 1_3:+3511518 Msa0097670:CDS
GGTTCACATTGAAGAAACAA+AGG 0.561420 1_3:+3510307 Msa0097670:intron
GTCACTTATTGAACTATCAT+CGG 0.561727 1_3:-3509731 None:intergenic
AAACTACAAAGATAGCTTTG+AGG 0.565331 1_3:+3512853 Msa0097670:CDS
AAGTCGCTTATTTCCTTGCG+TGG 0.570842 1_3:+3514467 Msa0097670:CDS
GTTATTAATAAATTAAGTGA+GGG 0.571192 1_3:+3509980 Msa0097670:CDS
TAGATCTTGCTGGCTCTGAA+AGG 0.571765 1_3:+3509879 Msa0097670:CDS
CTGAAAGATTCTGGAAGAGG+AGG 0.571957 1_3:-3511626 None:intergenic
TCCAGAATCTTTCAGCAATG+TGG 0.573414 1_3:+3511634 Msa0097670:CDS
AAGATACGAAAGCCTCGAAA+GGG 0.575290 1_3:+3514259 Msa0097670:CDS
CTACAAAGATAGCTTTGAGG+AGG 0.575855 1_3:+3512856 Msa0097670:CDS
ATTTCTCTTCACAAGATCCA+TGG 0.581284 1_3:+3507557 Msa0097670:CDS
ATGAAGGTGATTGAAAGCAA+AGG 0.582135 1_3:+3509691 Msa0097670:intron
CAATTGTGTTCAAGTGAATG+AGG 0.582429 1_3:+3510367 Msa0097670:CDS
CAATAACAGGAAATCAAAAG+AGG 0.585245 1_3:+3513172 Msa0097670:CDS
TAAACATTGAAGTACAGAGA+AGG 0.588298 1_3:+3514390 Msa0097670:CDS
TCGCTTGACAACAAAAGCAC+TGG 0.588807 1_3:-3511573 None:intergenic
TTTAATTCGAGTTTCATACA+TGG 0.590597 1_3:+3509102 Msa0097670:CDS
AATGATTGAATATTTCGAGT+GGG 0.590847 1_3:-3511725 None:intergenic
TTGCACCGTAGCACCAGAAG+AGG 0.591359 1_3:+3510195 Msa0097670:CDS
GGTCTTAAGATCGCCACGCA+AGG 0.594095 1_3:-3514480 None:intergenic
TATGAGGTTATCAGAATCTG+TGG 0.594241 1_3:+3512829 Msa0097670:CDS
CTGTTGTTCAAACTTTGGAG+CGG 0.594910 1_3:-3507436 None:intergenic
GAGTAATTTGAAGAGAATCA+AGG 0.596477 1_3:-3511703 None:intergenic
GATCTCCTTAAAGTAGGGGA+AGG 0.597889 1_3:+3509398 Msa0097670:CDS
CATTCAGGGATCTCATGCTG+GGG 0.601417 1_3:+3510918 Msa0097670:intron
ATTCATGAGAGTCTGGAGGT+TGG 0.603780 1_3:+3509181 Msa0097670:CDS
AATATATCTTTGACTGCCCG+AGG 0.603820 1_3:-3508958 None:intergenic
AACGGAATCTGATTACTCAA+AGG 0.604986 1_3:+3514223 Msa0097670:CDS
ACAAAGGGCTCTGGTTTGGG+AGG 0.608213 1_3:+3514197 Msa0097670:intron
ACTCAGGAACGATTTACTCA+AGG 0.610689 1_3:+3510963 Msa0097670:CDS
GAATGATTGAATATTTCGAG+TGG 0.614233 1_3:-3511726 None:intergenic
AACTGCAAAGTATGAACGAG+AGG 0.615395 1_3:+3512271 Msa0097670:CDS
GGACCTAGATATTTGAGGCG+AGG 0.618934 1_3:+3511476 Msa0097670:CDS
TGAAAAGATAAATGAACTGG+AGG 0.620446 1_3:+3512328 Msa0097670:CDS
CGTCAATGGAAGCTTCTGGA+AGG 0.620460 1_3:+3507520 Msa0097670:CDS
GAAGAGAAATGCGGTTATCG+TGG 0.622023 1_3:-3507544 None:intergenic
GGACCCGGGAGTGATTCCTC+GGG 0.623444 1_3:+3508942 Msa0097670:CDS
GGTGATTGAAAGCAAAGGGA+AGG 0.625003 1_3:+3509696 Msa0097670:intron
CACGATGAATGGTTGTGAGA+CGG 0.628639 1_3:+3508921 Msa0097670:CDS
TCTAGATCTCCTTAAAGTAG+GGG 0.634071 1_3:+3509394 Msa0097670:CDS
AAATGGAACTGGAAGAGGAG+AGG 0.635179 1_3:+3511113 Msa0097670:CDS
AGAGCTACGTAAGAAACTTG+AGG 0.645779 1_3:+3510834 Msa0097670:CDS
AATCCAGAGAAAGAATTCAG+AGG 0.645953 1_3:+3512730 Msa0097670:intron
CTTATGGGCAGACAAGCAGT+GGG 0.647006 1_3:+3508890 Msa0097670:CDS
TTTGTGCAGCTGTCAACACA+AGG 0.651504 1_3:+3513200 Msa0097670:CDS
AATGAACAATGGCTACGTTG+CGG 0.653712 1_3:+3511679 Msa0097670:CDS
GCAAATTCATGAGAGTCTGG+AGG 0.662554 1_3:+3509177 Msa0097670:CDS
ATGTGGCTGACGAAGATATG+TGG 0.664341 1_3:+3511651 Msa0097670:CDS
GCACTGGCTGTCTTTAAACA+GGG 0.667039 1_3:-3511557 None:intergenic
ATTTAGTATGAAATGGAGCG+TGG 0.667727 1_3:+3511082 Msa0097670:intron
TTGTGTTGACAGCTGCACAA+AGG 0.687059 1_3:-3513198 None:intergenic
ATGTGGTTGAAAATGAACAA+TGG 0.705354 1_3:+3511668 Msa0097670:CDS
ACGGAATCTGAAGAAACGAG+AGG 0.707109 1_3:-3507500 None:intergenic
GATTGCAGCATAGTTCCCAG+TGG 0.731076 1_3:-3513079 None:intergenic
ATCTGAGACTGAGAATGATG+TGG 0.732067 1_3:-3511191 None:intergenic
GGATCTTGTGAAGAGAAATG+CGG 0.734672 1_3:-3507553 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATAAGATAGAATTT+AGG - chr1_3:3507654-3507673 None:intergenic 10.0%
!!! GTTTTTAATTAATTTCATTT+CGG + chr1_3:3507819-3507838 Msa0097670:intron 10.0%
!!! CTTTATTTCTATTTTTTAAA+AGG + chr1_3:3511782-3511801 Msa0097670:intron 10.0%
!! AAAACAATTTGAATTGAATT+TGG - chr1_3:3507804-3507823 None:intergenic 15.0%
!! TAGTAAGTTGTTAAAATATA+TGG + chr1_3:3508386-3508405 Msa0097670:intron 15.0%
!! ATGACAATAATTATATGATA+TGG + chr1_3:3508851-3508870 Msa0097670:intron 15.0%
!!! TATATTTTCAAAAATTGAGA+CGG + chr1_3:3508975-3508994 Msa0097670:CDS 15.0%
!!! TTCTTTTTACATCATAATAT+TGG + chr1_3:3509624-3509643 Msa0097670:intron 15.0%
!! TATATTTAAAGAAAAATGGA+AGG - chr1_3:3509796-3509815 None:intergenic 15.0%
!! ATATAATATAGTTGAATTTG+TGG + chr1_3:3509843-3509862 Msa0097670:intron 15.0%
!! TGTTATTAATAAATTAAGTG+AGG + chr1_3:3509979-3509998 Msa0097670:CDS 15.0%
!! GTTATTAATAAATTAAGTGA+GGG + chr1_3:3509980-3509999 Msa0097670:CDS 15.0%
!!! AAATAGGTATATTTTTTTGT+TGG + chr1_3:3510009-3510028 Msa0097670:intron 15.0%
!!! ACTTTAGAAAATAATAATGT+TGG + chr1_3:3510070-3510089 Msa0097670:intron 15.0%
!! CTAAATGATTTGAAAATTAT+TGG - chr1_3:3510288-3510307 None:intergenic 15.0%
!!! CAATAATTTTCAAATCATTT+AGG + chr1_3:3510286-3510305 Msa0097670:intron 15.0%
!! AGCAAAAAGAATATTAAAAA+GGG - chr1_3:3510425-3510444 None:intergenic 15.0%
!! TAAGAATACAAGATATAAAA+GGG + chr1_3:3511909-3511928 Msa0097670:intron 15.0%
!!! TTATAGTTTCTTTTTTGATT+TGG + chr1_3:3512220-3512239 Msa0097670:intron 15.0%
!! AAATTAGAAAAATTAGAAGA+GGG - chr1_3:3512467-3512486 None:intergenic 15.0%
!!! TTTTGTATAATTTAAAGTGA+AGG - chr1_3:3513494-3513513 None:intergenic 15.0%
!!! ACTAAATTTTTATAGAGTCA+AGG - chr1_3:3508294-3508313 None:intergenic 20.0%
!! TATATGTAAATTAGTGTAAC+TGG + chr1_3:3508662-3508681 Msa0097670:intron 20.0%
!! AATAATTATATGATATGGTC+AGG + chr1_3:3508856-3508875 Msa0097670:intron 20.0%
!! ATAATTATATGATATGGTCA+GGG + chr1_3:3508857-3508876 Msa0097670:intron 20.0%
!!! TTTTATTATTTGTTTTCCAG+CGG + chr1_3:3509318-3509337 Msa0097670:intron 20.0%
!!! GTTATTATTTTACAGTGAAT+AGG + chr1_3:3509505-3509524 Msa0097670:intron 20.0%
!! ATCACATACAATATTTAGAA+TGG + chr1_3:3509566-3509585 Msa0097670:CDS 20.0%
!!! TGATTAAAAAGCATTAGATT+AGG - chr1_3:3509668-3509687 None:intergenic 20.0%
!!! TGCTTTTTAATCAAATATGA+AGG + chr1_3:3509675-3509694 Msa0097670:intron 20.0%
!! TTAATTTACTATCACGATAT+GGG - chr1_3:3510126-3510145 None:intergenic 20.0%
!! GAGCAAAAAGAATATTAAAA+AGG - chr1_3:3510426-3510445 None:intergenic 20.0%
!!! AGAAAGTATTTAACATTTAC+AGG - chr1_3:3511268-3511287 None:intergenic 20.0%
!!! ACTTTCTAATTCTAAAACAA+TGG + chr1_3:3511281-3511300 Msa0097670:intron 20.0%
!! AAATAAAGATATGAACTTAC+AGG - chr1_3:3511770-3511789 None:intergenic 20.0%
!! ATATCTTGTATTCTTAGTTA+TGG - chr1_3:3511905-3511924 None:intergenic 20.0%
!! CTAAGAATACAAGATATAAA+AGG + chr1_3:3511908-3511927 Msa0097670:intron 20.0%
!! AAATTCATAAACCAATTGAA+GGG - chr1_3:3511966-3511985 None:intergenic 20.0%
!! AAAATTCATAAACCAATTGA+AGG - chr1_3:3511967-3511986 None:intergenic 20.0%
!!! CAAATATTATTTTGTGAAAC+TGG - chr1_3:3512031-3512050 None:intergenic 20.0%
!! TCTATATACATAATCATCTT+CGG - chr1_3:3512067-3512086 None:intergenic 20.0%
!! AAATGAAAAGATAAATGAAC+TGG + chr1_3:3512325-3512344 Msa0097670:CDS 20.0%
!! ATATACTATCATTCATACTT+TGG + chr1_3:3512361-3512380 Msa0097670:intron 20.0%
!! CAAATTAGAAAAATTAGAAG+AGG - chr1_3:3512468-3512487 None:intergenic 20.0%
!!! CTCTTCTAATTTTTCTAATT+TGG + chr1_3:3512466-3512485 Msa0097670:intron 20.0%
!! GAATAATTTAATTACATCAC+TGG + chr1_3:3513134-3513153 Msa0097670:CDS 20.0%
!!! CTATTCTTTGTCTTATTTTT+AGG + chr1_3:3513270-3513289 Msa0097670:intron 20.0%
!! ATTCAACTTTACTTGAAAAA+AGG + chr1_3:3513592-3513611 Msa0097670:intron 20.0%
!!! TTTTAAGACAAAACATAGTA+AGG + chr1_3:3514141-3514160 Msa0097670:intron 20.0%
!! TTGTAACAAAAAATCAGTTT+AGG - chr1_3:3514181-3514200 None:intergenic 20.0%
!!! AAACTGATTTTTTGTTACAA+AGG + chr1_3:3514181-3514200 Msa0097670:intron 20.0%
!!! AACTGATTTTTTGTTACAAA+GGG + chr1_3:3514182-3514201 Msa0097670:intron 20.0%
!! TACTATACTCTTTTTCTTAG+CGG - chr1_3:3507394-3507413 None:intergenic 25.0%
! GAAAAAGAAAACAAAATCGA+AGG - chr1_3:3507679-3507698 None:intergenic 25.0%
!! GAATTCAGTAAAGATAGTTT+TGG + chr1_3:3507979-3507998 Msa0097670:intron 25.0%
! AAAGTCAGAGATGAATTTAA+TGG - chr1_3:3508222-3508241 None:intergenic 25.0%
! ATTAAATTCATCTCTGACTT+TGG + chr1_3:3508221-3508240 Msa0097670:intron 25.0%
! TTTAACCACTAACTTCAATA+AGG - chr1_3:3508413-3508432 None:intergenic 25.0%
! TGAAGTTAGTGGTTAAATAT+AGG + chr1_3:3508416-3508435 Msa0097670:intron 25.0%
! GAAGTTAGTGGTTAAATATA+GGG + chr1_3:3508417-3508436 Msa0097670:intron 25.0%
! AATCTATTAAACTGTCAAGT+TGG - chr1_3:3508444-3508463 None:intergenic 25.0%
! TTGACAGTTTAATAGATTCA+AGG + chr1_3:3508446-3508465 Msa0097670:intron 25.0%
! ACCGTTATATTAATTGTGTT+AGG + chr1_3:3508770-3508789 Msa0097670:intron 25.0%
! CCCTAACACAATTAATATAA+CGG - chr1_3:3508774-3508793 None:intergenic 25.0%
! CCGTTATATTAATTGTGTTA+GGG + chr1_3:3508771-3508790 Msa0097670:intron 25.0%
!! TTTAATTCGAGTTTCATACA+TGG + chr1_3:3509102-3509121 Msa0097670:CDS 25.0%
!!! TAACTTTGCTTTTTCTTTTG+TGG + chr1_3:3509216-3509235 Msa0097670:CDS 25.0%
!! TTTTCTTTTGTGGTTAATGT+TGG + chr1_3:3509226-3509245 Msa0097670:CDS 25.0%
!! TAAAATCAGCACAATTTTAC+AGG - chr1_3:3509303-3509322 None:intergenic 25.0%
!!! TTTATTATTTGTTTTCCAGC+GGG + chr1_3:3509319-3509338 Msa0097670:intron 25.0%
! CATTATTGACAATTTCTTCT+CGG - chr1_3:3509364-3509383 None:intergenic 25.0%
!! TCCTCATTTCTTTTCAAAAT+TGG + chr1_3:3509592-3509611 Msa0097670:intron 25.0%
!!! ACCAATTTTGAAAAGAAATG+AGG - chr1_3:3509596-3509615 None:intergenic 25.0%
! GTTAATTTACTATCACGATA+TGG - chr1_3:3510127-3510146 None:intergenic 25.0%
! ACAATTTGGGAAAATCAAAT+GGG - chr1_3:3510478-3510497 None:intergenic 25.0%
! AACAATTTGGGAAAATCAAA+TGG - chr1_3:3510479-3510498 None:intergenic 25.0%
! TGTGTAACTAAACTATCTAT+TGG + chr1_3:3510534-3510553 Msa0097670:intron 25.0%
! AGAATTAGGATAATCGTATT+AGG + chr1_3:3510573-3510592 Msa0097670:intron 25.0%
! GCAAAAACAAGTAAAATGTA+GGG - chr1_3:3510641-3510660 None:intergenic 25.0%
! TATAGCTGGTATAAAATTGA+AGG - chr1_3:3510699-3510718 None:intergenic 25.0%
!! CTTACTTATTTCTTGATTGT+TGG + chr1_3:3510754-3510773 Msa0097670:intron 25.0%
! TTACATGAATATTTCCATTC+AGG + chr1_3:3510903-3510922 Msa0097670:intron 25.0%
! TACATGAATATTTCCATTCA+GGG + chr1_3:3510904-3510923 Msa0097670:intron 25.0%
! TTCCACTATTTAGTATGAAA+TGG + chr1_3:3511075-3511094 Msa0097670:intron 25.0%
! AATTATGCTCATGTATGTTA+GGG + chr1_3:3511455-3511474 Msa0097670:intron 25.0%
!! AATGATTGAATATTTCGAGT+GGG - chr1_3:3511728-3511747 None:intergenic 25.0%
!! CTGTATATATTGCTATTATG+GGG - chr1_3:3511868-3511887 None:intergenic 25.0%
!! GCTGTATATATTGCTATTAT+GGG - chr1_3:3511869-3511888 None:intergenic 25.0%
!! TGCTGTATATATTGCTATTA+TGG - chr1_3:3511870-3511889 None:intergenic 25.0%
!!! TTCGCTTTTAAACAAAAACA+TGG - chr1_3:3512117-3512136 None:intergenic 25.0%
! TACACATAAAAAGAGAAACA+TGG - chr1_3:3512187-3512206 None:intergenic 25.0%
!! ACAATAAATTGACTGTTTCT+TGG - chr1_3:3512942-3512961 None:intergenic 25.0%
! GATTGATATCTTGATATTTG+TGG - chr1_3:3513237-3513256 None:intergenic 25.0%
! AAGATATCAATCATCAATCA+TGG + chr1_3:3513245-3513264 Msa0097670:intron 25.0%
!! TTTAAAGTGAAGGTAATACA+AGG - chr1_3:3513484-3513503 None:intergenic 25.0%
! CAAAAGCTTGAATCATATTA+TGG + chr1_3:3513509-3513528 Msa0097670:intron 25.0%
! TTTCTGTTAGATAGGAAATT+AGG + chr1_3:3513690-3513709 Msa0097670:intron 25.0%
! AAATTAGGAACAAACAATCA+GGG + chr1_3:3513705-3513724 Msa0097670:intron 25.0%
!!! AACTTTTTTATCTTGCCTTT+TGG - chr1_3:3514005-3514024 None:intergenic 25.0%
!! CATATAAATTAGAAGTGTGT+AGG + chr1_3:3514026-3514045 Msa0097670:intron 25.0%
!! CAATTCTATCTTTTTACCTA+TGG - chr1_3:3514107-3514126 None:intergenic 25.0%
! TTAAGACCAAAATTGAGAAA+TGG + chr1_3:3514495-3514514 Msa0097670:CDS 25.0%
!! TTGAATTTTCGAGAGATTGA+CGG - chr1_3:3507368-3507387 None:intergenic 30.0%
! CTTTTCTGTTGTTCAAACTT+TGG - chr1_3:3507444-3507463 None:intergenic 30.0%
TTGAACAACAGAAAAGCAAA+TGG + chr1_3:3507448-3507467 Msa0097670:exon 30.0%
TCTAACTCTTCATATGCTTT+CGG + chr1_3:3507590-3507609 Msa0097670:CDS 30.0%
TGTTTATGAGATTCTCACTA+AGG + chr1_3:3507741-3507760 Msa0097670:CDS 30.0%
! TTGGTGATAAATGATGAACT+TGG + chr1_3:3507998-3508017 Msa0097670:intron 30.0%
! TCAAATACTGACCTCAATTT+TGG + chr1_3:3508077-3508096 Msa0097670:intron 30.0%
!! TCATTGACTTAGATTGATGT+TGG - chr1_3:3508184-3508203 None:intergenic 30.0%
ACATCAATCTAAGTCAATGA+CGG + chr1_3:3508184-3508203 Msa0097670:intron 30.0%
! GGGATTAAATTGATAGTAAG+TGG + chr1_3:3508341-3508360 Msa0097670:intron 30.0%
ATAATCTCAGTGACCTATTT+GGG + chr1_3:3508486-3508505 Msa0097670:intron 30.0%
TCTAAAGGAATACTACTTGA+AGG + chr1_3:3508701-3508720 Msa0097670:intron 30.0%
CCAAATCTAACTCAAAGTAA+CGG - chr1_3:3508806-3508825 None:intergenic 30.0%
TTTCAAAAATTGAGACGGTA+TGG + chr1_3:3508980-3508999 Msa0097670:intron 30.0%
TTCAAAAATTGAGACGGTAT+GGG + chr1_3:3508981-3509000 Msa0097670:intron 30.0%
! TCTGATTTTCAACAACAAGA+AGG - chr1_3:3509153-3509172 None:intergenic 30.0%
!! TTATTATTTGTTTTCCAGCG+GGG + chr1_3:3509320-3509339 Msa0097670:intron 30.0%
TTCTAGATCTCCTTAAAGTA+GGG + chr1_3:3509393-3509412 Msa0097670:CDS 30.0%
GTGAGACAAATATGAATGTA+AGG + chr1_3:3509535-3509554 Msa0097670:CDS 30.0%
!! TATTGGTTTGTGCATAAAGA+TGG + chr1_3:3509641-3509660 Msa0097670:intron 30.0%
GTCACTTATTGAACTATCAT+CGG - chr1_3:3509734-3509753 None:intergenic 30.0%
TAGAATTTAGTAGATCTTGC+TGG + chr1_3:3509869-3509888 Msa0097670:intron 30.0%
! AACAAAAGCTTGATGATTCT+AGG + chr1_3:3509953-3509972 Msa0097670:CDS 30.0%
! GTTGGACATGTTTCATTTTA+TGG + chr1_3:3510088-3510107 Msa0097670:intron 30.0%
! CATGTTTCATTTTATGGTAG+AGG + chr1_3:3510094-3510113 Msa0097670:intron 30.0%
!! TTGTGTCTCTTTAACTTGTT+TGG + chr1_3:3510238-3510257 Msa0097670:intron 30.0%
GTTCACATTGAAGAAACAAA+GGG + chr1_3:3510308-3510327 Msa0097670:CDS 30.0%
! TTAAGCACTGCTAAACATAA+TGG - chr1_3:3510448-3510467 None:intergenic 30.0%
CAATTTGGGAAAATCAAATG+GGG - chr1_3:3510477-3510496 None:intergenic 30.0%
CTGATACTAGGAAACAATTT+GGG - chr1_3:3510491-3510510 None:intergenic 30.0%
ACTGATACTAGGAAACAATT+TGG - chr1_3:3510492-3510511 None:intergenic 30.0%
CAAGTAAATCAACTGATACT+AGG - chr1_3:3510503-3510522 None:intergenic 30.0%
AAGAAAATCGTGGAAGAATT+AGG + chr1_3:3510559-3510578 Msa0097670:intron 30.0%
TAAAATGTAGGGAAAACTTC+AGG - chr1_3:3510630-3510649 None:intergenic 30.0%
GGCAAAAACAAGTAAAATGT+AGG - chr1_3:3510642-3510661 None:intergenic 30.0%
!!! ACATTTTACTTGTTTTTGCC+TGG + chr1_3:3510642-3510661 Msa0097670:intron 30.0%
CAAATACAGGAAAACTATCT+AGG - chr1_3:3510724-3510743 None:intergenic 30.0%
! GTTTTCCTGTATTTGCATTT+TGG + chr1_3:3510729-3510748 Msa0097670:intron 30.0%
AAGTACCAAAATGCAAATAC+AGG - chr1_3:3510737-3510756 None:intergenic 30.0%
CTCCATTTCATACTAAATAG+TGG - chr1_3:3511080-3511099 None:intergenic 30.0%
!! CGCAACTTTGTTATTTATCA+TGG + chr1_3:3511312-3511331 Msa0097670:intron 30.0%
! AAGGAAAAGTATGAATTGTC+TGG - chr1_3:3511352-3511371 None:intergenic 30.0%
TGAGCATAATTGGAACAAAA+TGG - chr1_3:3511446-3511465 None:intergenic 30.0%
CTAACATACATGAGCATAAT+TGG - chr1_3:3511456-3511475 None:intergenic 30.0%
CAATTATGCTCATGTATGTT+AGG + chr1_3:3511454-3511473 Msa0097670:intron 30.0%
GACATTAATAGTACATCTCA+AGG + chr1_3:3511518-3511537 Msa0097670:CDS 30.0%
ATGTGGTTGAAAATGAACAA+TGG + chr1_3:3511668-3511687 Msa0097670:CDS 30.0%
GAGTAATTTGAAGAGAATCA+AGG - chr1_3:3511706-3511725 None:intergenic 30.0%
GAATGATTGAATATTTCGAG+TGG - chr1_3:3511729-3511748 None:intergenic 30.0%
!!! GAAGTTTTTTTCCCTTCAAT+TGG + chr1_3:3511952-3511971 Msa0097670:intron 30.0%
TATTGTTGAGCAATTCTTGT+TGG + chr1_3:3512000-3512019 Msa0097670:intron 30.0%
GTATTTAATATAGCACTGTG+TGG + chr1_3:3512137-3512156 Msa0097670:intron 30.0%
TGAAAAGATAAATGAACTGG+AGG + chr1_3:3512328-3512347 Msa0097670:CDS 30.0%
GCTTACTAACAATTTCATAC+AGG - chr1_3:3512403-3512422 None:intergenic 30.0%
!! ACGAAACTGTTTAACTTGAT+AGG + chr1_3:3512437-3512456 Msa0097670:intron 30.0%
TCTATATCAGCTACATCAAA+TGG - chr1_3:3512510-3512529 None:intergenic 30.0%
! CTTCGCTCTCTTTTATAAAA+TGG + chr1_3:3512672-3512691 Msa0097670:intron 30.0%
ATAGGCAATTCTTGAATTAG+CGG - chr1_3:3512812-3512831 None:intergenic 30.0%
TAATTCAAGAATTGCCTATG+AGG + chr1_3:3512813-3512832 Msa0097670:CDS 30.0%
! AAACTACAAAGATAGCTTTG+AGG + chr1_3:3512853-3512872 Msa0097670:CDS 30.0%
TATGGCAAATAAAGCTGATA+TGG - chr1_3:3512913-3512932 None:intergenic 30.0%
! ACTGTTTCTTGGAATGATTA+TGG - chr1_3:3512931-3512950 None:intergenic 30.0%
TTATCAGAAAGCTCAATAAC+AGG + chr1_3:3513159-3513178 Msa0097670:CDS 30.0%
CAATAACAGGAAATCAAAAG+AGG + chr1_3:3513172-3513191 Msa0097670:CDS 30.0%
TAGTTACTATGTGGGATTAA+TGG - chr1_3:3513327-3513346 None:intergenic 30.0%
ATAGTAACTAAAGCCTTGAT+TGG + chr1_3:3513337-3513356 Msa0097670:intron 30.0%
TATTGAACAAATGCCAATCA+AGG - chr1_3:3513353-3513372 None:intergenic 30.0%
TATCATTCCCTTCATTTGAA+GGG - chr1_3:3513573-3513592 None:intergenic 30.0%
ATATCATTCCCTTCATTTGA+AGG - chr1_3:3513574-3513593 None:intergenic 30.0%
TACTTGAAAAAAGGTTAGAG+AGG + chr1_3:3513601-3513620 Msa0097670:intron 30.0%
ACATTCACTCATTTCACTTT+GGG - chr1_3:3513654-3513673 None:intergenic 30.0%
AAAGTGAAATGAGTGAATGT+GGG + chr1_3:3513654-3513673 Msa0097670:intron 30.0%
TTGAGGAATTTCTGTTAGAT+AGG + chr1_3:3513682-3513701 Msa0097670:intron 30.0%
GAAATTAGGAACAAACAATC+AGG + chr1_3:3513704-3513723 Msa0097670:intron 30.0%
!! ATACTGATTTAGAGACCAAA+AGG + chr1_3:3513987-3514006 Msa0097670:intron 30.0%
TAAACATTGAAGTACAGAGA+AGG + chr1_3:3514390-3514409 Msa0097670:CDS 30.0%
AGAGAAGGAAAAATCTAGAA+GGG + chr1_3:3514405-3514424 Msa0097670:CDS 30.0%
!! AAAGATTTTGGCACTGAAAT+TGG - chr1_3:3514533-3514552 None:intergenic 30.0%
! ATTTCAGTGCCAAAATCTTT+TGG + chr1_3:3514533-3514552 Msa0097670:CDS 30.0%
! TTTCAGTGCCAAAATCTTTT+GGG + chr1_3:3514534-3514553 Msa0097670:CDS 30.0%
ATTGTAAACCATGAACATCT+TGG + chr1_3:3514573-3514592 Msa0097670:three_prime_UTR 30.0%
! CGGATATTTTCTGTTCATCA+TGG - chr1_3:3507328-3507347 None:intergenic 35.0%
AGAAAATATCCGTTTGTCGA+AGG + chr1_3:3507336-3507355 Msa0097670:five_prime_UTR 35.0%
GAAAATATCCGTTTGTCGAA+GGG + chr1_3:3507337-3507356 Msa0097670:five_prime_UTR 35.0%
ATTTCTCTTCACAAGATCCA+TGG + chr1_3:3507557-3507576 Msa0097670:CDS 35.0%
GGTCAGTATTTGAAAAACTG+TGG - chr1_3:3508070-3508089 None:intergenic 35.0%
AGCATAAATGAGAGGATTTG+AGG + chr1_3:3508106-3508125 Msa0097670:intron 35.0%
ATAAATGAGAGGATTTGAGG+TGG + chr1_3:3508109-3508128 Msa0097670:intron 35.0%
TGGTCAATGATGTATGGAAT+TGG + chr1_3:3508129-3508148 Msa0097670:intron 35.0%
AGTCCTTCTGACAATATGTT+AGG + chr1_3:3508320-3508339 Msa0097670:intron 35.0%
GTCCTTCTGACAATATGTTA+GGG + chr1_3:3508321-3508340 Msa0097670:intron 35.0%
ATCCCTAACATATTGTCAGA+AGG - chr1_3:3508326-3508345 None:intergenic 35.0%
ATGGACCTTATTGAAGTTAG+TGG + chr1_3:3508405-3508424 Msa0097670:intron 35.0%
CATAATCTCAGTGACCTATT+TGG + chr1_3:3508485-3508504 Msa0097670:intron 35.0%
!! AAGTTGGTGGTTTACTTGAT+TGG + chr1_3:3508531-3508550 Msa0097670:intron 35.0%
!! AGTTGGTGGTTTACTTGATT+GGG + chr1_3:3508532-3508551 Msa0097670:intron 35.0%
! GCACTAGTTAAGGTATCTAA+AGG + chr1_3:3508686-3508705 Msa0097670:intron 35.0%
! CCGTTACTTTGAGTTAGATT+TGG + chr1_3:3508803-3508822 Msa0097670:intron 35.0%
ATCTGAGAAACAAACAAGCA+AGG - chr1_3:3509067-3509086 None:intergenic 35.0%
ATTGCAAATTCATGAGAGTC+TGG + chr1_3:3509174-3509193 Msa0097670:CDS 35.0%
! GTTCTAGATCTCCTTAAAGT+AGG + chr1_3:3509392-3509411 Msa0097670:CDS 35.0%
TCTAGATCTCCTTAAAGTAG+GGG + chr1_3:3509394-3509413 Msa0097670:CDS 35.0%
TTTACAGTGAATAGGCACTT+TGG + chr1_3:3509513-3509532 Msa0097670:intron 35.0%
ATGAAGGTGATTGAAAGCAA+AGG + chr1_3:3509691-3509710 Msa0097670:intron 35.0%
TGAAGGTGATTGAAAGCAAA+GGG + chr1_3:3509692-3509711 Msa0097670:intron 35.0%
TAAGTGAGGGCTCAAAAAAT+AGG + chr1_3:3509993-3510012 Msa0097670:CDS 35.0%
!!! GGTGCAAATAATGGATGTTT+TGG - chr1_3:3510182-3510201 None:intergenic 35.0%
GGTTCACATTGAAGAAACAA+AGG + chr1_3:3510307-3510326 Msa0097670:intron 35.0%
CTCATTCACTTGAACACAAT+TGG - chr1_3:3510369-3510388 None:intergenic 35.0%
CAATTGTGTTCAAGTGAATG+AGG + chr1_3:3510367-3510386 Msa0097670:CDS 35.0%
TCTATTGGAGAAGAAAATCG+TGG + chr1_3:3510549-3510568 Msa0097670:intron 35.0%
ATCGTATTAGGAAGCTTACT+CGG + chr1_3:3510585-3510604 Msa0097670:intron 35.0%
AACCTATGCTAACTATTTCC+AGG - chr1_3:3510663-3510682 None:intergenic 35.0%
AAACTATCTAGGCATATAGC+TGG - chr1_3:3510713-3510732 None:intergenic 35.0%
ATTTAGTATGAAATGGAGCG+TGG + chr1_3:3511082-3511101 Msa0097670:intron 35.0%
AGAGGAAATCACGTAATCAA+TGG + chr1_3:3511131-3511150 Msa0097670:CDS 35.0%
! GAAAAGTATGAATTGTCTGG+AGG - chr1_3:3511349-3511368 None:intergenic 35.0%
CAAAATGGAGCAAAAATGTC+AGG - chr1_3:3511431-3511450 None:intergenic 35.0%
AACTTCATCAACGATGTCAA+CGG - chr1_3:3511938-3511957 None:intergenic 35.0%
CAAGAATTGCTCAACAATAG+AGG - chr1_3:3511999-3512018 None:intergenic 35.0%
! AGTTTCGTTTGATGATCTTC+TGG - chr1_3:3512425-3512444 None:intergenic 35.0%
AATACACATCAACAGAGTCA+TGG - chr1_3:3512710-3512729 None:intergenic 35.0%
AATCCAGAGAAAGAATTCAG+AGG + chr1_3:3512730-3512749 Msa0097670:intron 35.0%
CCTATTAGTTGCTTGTTTGA+CGG - chr1_3:3512761-3512780 None:intergenic 35.0%
ACAGATTCTGATAACCTCAT+AGG - chr1_3:3512830-3512849 None:intergenic 35.0%
TATGAGGTTATCAGAATCTG+TGG + chr1_3:3512829-3512848 Msa0097670:CDS 35.0%
! TATCAGTAATGCAGGTTGAA+TGG + chr1_3:3512882-3512901 Msa0097670:intron 35.0%
! ATCAGTAATGCAGGTTGAAT+GGG + chr1_3:3512883-3512902 Msa0097670:intron 35.0%
TCCTAAACAGAGATTTGCAT+TGG + chr1_3:3512972-3512991 Msa0097670:intron 35.0%
TCCAATGCAAATCTCTGTTT+AGG - chr1_3:3512976-3512995 None:intergenic 35.0%
AAACAGAGATTTGCATTGGA+TGG + chr1_3:3512976-3512995 Msa0097670:intron 35.0%
CTTTCAACCATGAGTGAAAT+TGG + chr1_3:3513021-3513040 Msa0097670:CDS 35.0%
ATTTGCACCAATTTCACTCA+TGG - chr1_3:3513031-3513050 None:intergenic 35.0%
TGCAAATCTATTTGCAGCTT+TGG + chr1_3:3513044-3513063 Msa0097670:CDS 35.0%
!! AATCTATTTGCAGCTTTGGA+AGG + chr1_3:3513048-3513067 Msa0097670:CDS 35.0%
AATCCAGGAACAACAAAAAG+AGG + chr1_3:3513098-3513117 Msa0097670:CDS 35.0%
! CAAGGCTTTAGTTACTATGT+GGG - chr1_3:3513335-3513354 None:intergenic 35.0%
! TCAAGGCTTTAGTTACTATG+TGG - chr1_3:3513336-3513355 None:intergenic 35.0%
TATAGTATGTGTGTCACATC+AGG + chr1_3:3513407-3513426 Msa0097670:intron 35.0%
!! TTCATTTGAAGGGTGCTATA+AGG - chr1_3:3513563-3513582 None:intergenic 35.0%
TTATAGCACCCTTCAAATGA+AGG + chr1_3:3513562-3513581 Msa0097670:intron 35.0%
TATAGCACCCTTCAAATGAA+GGG + chr1_3:3513563-3513582 Msa0097670:intron 35.0%
ATTCACTCATTTCACTTTGG+GGG - chr1_3:3513652-3513671 None:intergenic 35.0%
CATTCACTCATTTCACTTTG+GGG - chr1_3:3513653-3513672 None:intergenic 35.0%
CACATTCACTCATTTCACTT+TGG - chr1_3:3513655-3513674 None:intergenic 35.0%
CAAAGTGAAATGAGTGAATG+TGG + chr1_3:3513653-3513672 Msa0097670:intron 35.0%
AAGTGAAATGAGTGAATGTG+GGG + chr1_3:3513655-3513674 Msa0097670:intron 35.0%
TCGTTAAATAGTGTCTACAG+CGG + chr1_3:3513832-3513851 Msa0097670:intron 35.0%
TTGTCAAATAGCAGCTATAG+TGG + chr1_3:3513899-3513918 Msa0097670:intron 35.0%
!!! TTTTTTGTTACAAAGGGCTC+TGG + chr1_3:3514188-3514207 Msa0097670:intron 35.0%
AACGGAATCTGATTACTCAA+AGG + chr1_3:3514223-3514242 Msa0097670:CDS 35.0%
!! CTTTCAAAGCATTTTCCCTT+TGG - chr1_3:3514367-3514386 None:intergenic 35.0%
CAGAGAAGGAAAAATCTAGA+AGG + chr1_3:3514404-3514423 Msa0097670:CDS 35.0%
GAGAAGGAAAAATCTAGAAG+GGG + chr1_3:3514406-3514425 Msa0097670:CDS 35.0%
! AGCTCTCCATTTCTCAATTT+TGG - chr1_3:3514504-3514523 None:intergenic 35.0%
! TCTTGACACCCAAAAGATTT+TGG - chr1_3:3514545-3514564 None:intergenic 35.0%
AAAAGACACCAAGATGTTCA+TGG - chr1_3:3514584-3514603 None:intergenic 35.0%
CATGGACTTTCATGGCATAT+GGG - chr1_3:3507310-3507329 None:intergenic 40.0%
TCATGGACTTTCATGGCATA+TGG - chr1_3:3507311-3507330 None:intergenic 40.0%
CTGTTCATCATGGACTTTCA+TGG - chr1_3:3507318-3507337 None:intergenic 40.0%
!! TGTTGTTCAAACTTTGGAGC+GGG - chr1_3:3507438-3507457 None:intergenic 40.0%
! CTGTTGTTCAAACTTTGGAG+CGG - chr1_3:3507439-3507458 None:intergenic 40.0%
GTTTCTTCAGATTCCGTCAA+TGG + chr1_3:3507506-3507525 Msa0097670:CDS 40.0%
GGATCTTGTGAAGAGAAATG+CGG - chr1_3:3507556-3507575 None:intergenic 40.0%
GCATATGAAGAGTTAGAGAG+AGG - chr1_3:3507587-3507606 None:intergenic 40.0%
! AGTCGGTTCTTAATTGAGGT+CGG + chr1_3:3508039-3508058 Msa0097670:intron 40.0%
ATGCTGTCGATCCAAAATTG+AGG - chr1_3:3508091-3508110 None:intergenic 40.0%
TTGAGGTGGTCAATGATGTA+TGG + chr1_3:3508123-3508142 Msa0097670:intron 40.0%
!! TTTGGAGAGCACTCTCAAAT+AGG + chr1_3:3508239-3508258 Msa0097670:intron 40.0%
TACAAAGTCAGCGACTAAGT+TGG + chr1_3:3508515-3508534 Msa0097670:intron 40.0%
TGTAACTGGTGCACTAGTTA+AGG + chr1_3:3508676-3508695 Msa0097670:intron 40.0%
AATATATCTTTGACTGCCCG+AGG - chr1_3:3508961-3508980 None:intergenic 40.0%
ACAAACCTTCCCCTACTTTA+AGG - chr1_3:3509406-3509425 None:intergenic 40.0%
! CATTGTTCGAGTTTCAGTCT+TGG + chr1_3:3509753-3509772 Msa0097670:CDS 40.0%
TCTGAAAGGATTGCAAAGAC+TGG + chr1_3:3509893-3509912 Msa0097670:CDS 40.0%
GATGGAGTACGTTTGAAAGA+AGG + chr1_3:3509920-3509939 Msa0097670:CDS 40.0%
!! AACACAATTGGTGATGCGTT+TGG - chr1_3:3510357-3510376 None:intergenic 40.0%
TCGTATTAGGAAGCTTACTC+GGG + chr1_3:3510586-3510605 Msa0097670:intron 40.0%
TGCCTGGAAATAGTTAGCAT+AGG + chr1_3:3510658-3510677 Msa0097670:intron 40.0%
AGAGCTACGTAAGAAACTTG+AGG + chr1_3:3510834-3510853 Msa0097670:CDS 40.0%
AGCAAGAGGTTCTTAAACTC+AGG + chr1_3:3510947-3510966 Msa0097670:CDS 40.0%
ACTCAGGAACGATTTACTCA+AGG + chr1_3:3510963-3510982 Msa0097670:CDS 40.0%
AGGAACGATTTACTCAAGGT+AGG + chr1_3:3510967-3510986 Msa0097670:intron 40.0%
TGGTAAGCTTGAAATGGAAC+TGG + chr1_3:3511102-3511121 Msa0097670:CDS 40.0%
! ATCTGAGACTGAGAATGATG+TGG - chr1_3:3511194-3511213 None:intergenic 40.0%
TCATTCTCAGTCTCAGATTG+TGG + chr1_3:3511196-3511215 Msa0097670:CDS 40.0%
CATTCTCAGTCTCAGATTGT+GGG + chr1_3:3511197-3511216 Msa0097670:CDS 40.0%
GTCTGAAAAGCAGCACAAAA+AGG - chr1_3:3511371-3511390 None:intergenic 40.0%
AGCAAAGAGAGGGAAAGAAA+AGG - chr1_3:3511407-3511426 None:intergenic 40.0%
AATGTCAGGAAGCAAAGAGA+GGG - chr1_3:3511417-3511436 None:intergenic 40.0%
AAATGTCAGGAAGCAAAGAG+AGG - chr1_3:3511418-3511437 None:intergenic 40.0%
GTTAGGGACCTAGATATTTG+AGG + chr1_3:3511471-3511490 Msa0097670:intron 40.0%
AATCCTCGCCTCAAATATCT+AGG - chr1_3:3511482-3511501 None:intergenic 40.0%
! TTGCTGAAAGATTCTGGAAG+AGG - chr1_3:3511632-3511651 None:intergenic 40.0%
TCCAGAATCTTTCAGCAATG+TGG + chr1_3:3511634-3511653 Msa0097670:CDS 40.0%
AATGAACAATGGCTACGTTG+CGG + chr1_3:3511679-3511698 Msa0097670:CDS 40.0%
CAGGAGTTGTATCACTTAGT+GGG - chr1_3:3511751-3511770 None:intergenic 40.0%
ACAGGAGTTGTATCACTTAG+TGG - chr1_3:3511752-3511771 None:intergenic 40.0%
! TTGCTATTATGGGGAAGTAG+TGG - chr1_3:3511859-3511878 None:intergenic 40.0%
ATCATCTTCGGTACGTGTAT+TGG - chr1_3:3512055-3512074 None:intergenic 40.0%
! TGATTTGGCTGATGTTTGTC+AGG + chr1_3:3512235-3512254 Msa0097670:intron 40.0%
GATTTGGCTGATGTTTGTCA+GGG + chr1_3:3512236-3512255 Msa0097670:intron 40.0%
AACTGCAAAGTATGAACGAG+AGG + chr1_3:3512271-3512290 Msa0097670:CDS 40.0%
CTATCTTGAGCTTGTGTCAT+AGG + chr1_3:3512575-3512594 Msa0097670:intron 40.0%
ACAGGAAATGGGAGAAAGAT+TGG - chr1_3:3512616-3512635 None:intergenic 40.0%
TCTTTCTCCCATTTCCTGTA+TGG + chr1_3:3512617-3512636 Msa0097670:intron 40.0%
ATCAAGGCCATACAGGAAAT+GGG - chr1_3:3512627-3512646 None:intergenic 40.0%
CTTCCTCTGAATTCTTTCTC+TGG - chr1_3:3512736-3512755 None:intergenic 40.0%
CCGTCAAACAAGCAACTAAT+AGG + chr1_3:3512758-3512777 Msa0097670:CDS 40.0%
!! CTACAAAGATAGCTTTGAGG+AGG + chr1_3:3512856-3512875 Msa0097670:CDS 40.0%
!! GGAGGTTTTATCAGTAATGC+AGG + chr1_3:3512874-3512893 Msa0097670:CDS 40.0%
!!! GAACCTCTTTTTGTTGTTCC+TGG - chr1_3:3513104-3513123 None:intergenic 40.0%
AACAAAAAGAGGTTCGTGAG+AGG + chr1_3:3513109-3513128 Msa0097670:CDS 40.0%
GAGTTATACGAGATCTCTCA+TGG + chr1_3:3513455-3513474 Msa0097670:intron 40.0%
TTCACTCATTTCACTTTGGG+GGG - chr1_3:3513651-3513670 None:intergenic 40.0%
TTGCAGATCGCAGAAAATAG+CGG - chr1_3:3513961-3513980 None:intergenic 40.0%
! TTTCTAAAGAGCGCAACCAT+AGG + chr1_3:3514088-3514107 Msa0097670:intron 40.0%
AAAGATACGAAAGCCTCGAA+AGG + chr1_3:3514258-3514277 Msa0097670:CDS 40.0%
AAGATACGAAAGCCTCGAAA+GGG + chr1_3:3514259-3514278 Msa0097670:CDS 40.0%
AAAGTTGTAACTCCCTTTCG+AGG - chr1_3:3514274-3514293 None:intergenic 40.0%
TTGCAATTGTGTCAAGCCAA+AGG + chr1_3:3514348-3514367 Msa0097670:CDS 40.0%
TGCAATTGTGTCAAGCCAAA+GGG + chr1_3:3514349-3514368 Msa0097670:CDS 40.0%
AAGGAAAAATCTAGAAGGGG+AGG + chr1_3:3514409-3514428 Msa0097670:CDS 40.0%
CGGAAATACCCTTCGACAAA+CGG - chr1_3:3507348-3507367 None:intergenic 45.0%
AACGAGAGGACGAACTCTAA+CGG - chr1_3:3507489-3507508 None:intergenic 45.0%
ACGGAATCTGAAGAAACGAG+AGG - chr1_3:3507503-3507522 None:intergenic 45.0%
ATTCCGTCAATGGAAGCTTC+TGG + chr1_3:3507516-3507535 Msa0097670:CDS 45.0%
CTTCCAGAAGCTTCCATTGA+CGG - chr1_3:3507522-3507541 None:intergenic 45.0%
GAAGAGAAATGCGGTTATCG+TGG - chr1_3:3507547-3507566 None:intergenic 45.0%
AGTTAGAGAGAGGAGTTCCA+TGG - chr1_3:3507577-3507596 None:intergenic 45.0%
ATCATTCTCGCTGCTCTCAA+TGG + chr1_3:3507766-3507785 Msa0097670:CDS 45.0%
TTCTCTCTCGTTTGTGCAGT+CGG + chr1_3:3508022-3508041 Msa0097670:intron 45.0%
! GTGCAGTCGGTTCTTAATTG+AGG + chr1_3:3508035-3508054 Msa0097670:intron 45.0%
GGATCGACAGCATAAATGAG+AGG + chr1_3:3508098-3508117 Msa0097670:intron 45.0%
ATCTCAGTGACCTATTTGGG+AGG + chr1_3:3508489-3508508 Msa0097670:intron 45.0%
CTTTGTAGAGCCTCCCAAAT+AGG - chr1_3:3508502-3508521 None:intergenic 45.0%
! AAAGTCAGCGACTAAGTTGG+TGG + chr1_3:3508518-3508537 Msa0097670:intron 45.0%
TCAGGGACTGCATTTGCTTA+TGG + chr1_3:3508874-3508893 Msa0097670:intron 45.0%
CAGGGACTGCATTTGCTTAT+GGG + chr1_3:3508875-3508894 Msa0097670:intron 45.0%
CACGATGAATGGTTGTGAGA+CGG + chr1_3:3508921-3508940 Msa0097670:CDS 45.0%
GCAAATTCATGAGAGTCTGG+AGG + chr1_3:3509177-3509196 Msa0097670:CDS 45.0%
ATTCATGAGAGTCTGGAGGT+TGG + chr1_3:3509181-3509200 Msa0097670:CDS 45.0%
GATCTCCTTAAAGTAGGGGA+AGG + chr1_3:3509398-3509417 Msa0097670:CDS 45.0%
GGTGATTGAAAGCAAAGGGA+AGG + chr1_3:3509696-3509715 Msa0097670:intron 45.0%
!! TAGATCTTGCTGGCTCTGAA+AGG + chr1_3:3509879-3509898 Msa0097670:CDS 45.0%
ATTGCAAAGACTGGAGCTGA+TGG + chr1_3:3509902-3509921 Msa0097670:CDS 45.0%
!! TGGTGCTACGGTGCAAATAA+TGG - chr1_3:3510191-3510210 None:intergenic 45.0%
CGTATTAGGAAGCTTACTCG+GGG + chr1_3:3510587-3510606 Msa0097670:intron 45.0%
!! CAGATGCAGCCTTGTTAAAG+CGG + chr1_3:3510794-3510813 Msa0097670:CDS 45.0%
!! TAGCTGTTGCCGCTTTAACA+AGG - chr1_3:3510806-3510825 None:intergenic 45.0%
GCTTGAAATGGAACTGGAAG+AGG + chr1_3:3511108-3511127 Msa0097670:CDS 45.0%
AAATGGAACTGGAAGAGGAG+AGG + chr1_3:3511113-3511132 Msa0097670:CDS 45.0%
GACTGAGAATGATGTGGTAC+TGG - chr1_3:3511188-3511207 None:intergenic 45.0%
!! GCACTGGCTGTCTTTAAACA+GGG - chr1_3:3511560-3511579 None:intergenic 45.0%
!! AGCACTGGCTGTCTTTAAAC+AGG - chr1_3:3511561-3511580 None:intergenic 45.0%
! TCGCTTGACAACAAAAGCAC+TGG - chr1_3:3511576-3511595 None:intergenic 45.0%
! CTGAAAGATTCTGGAAGAGG+AGG - chr1_3:3511629-3511648 None:intergenic 45.0%
GCCACATTGCTGAAAGATTC+TGG - chr1_3:3511638-3511657 None:intergenic 45.0%
ATGTGGCTGACGAAGATATG+TGG + chr1_3:3511651-3511670 Msa0097670:CDS 45.0%
CATCAAGGCCATACAGGAAA+TGG - chr1_3:3512628-3512647 None:intergenic 45.0%
ACATAGCATCAAGGCCATAC+AGG - chr1_3:3512634-3512653 None:intergenic 45.0%
GCTTGCAGTACATAGCATCA+AGG - chr1_3:3512643-3512662 None:intergenic 45.0%
!!! TTGGAAGGTCACTTTTCCAC+TGG + chr1_3:3513063-3513082 Msa0097670:CDS 45.0%
!!! TGGAAGGTCACTTTTCCACT+GGG + chr1_3:3513064-3513083 Msa0097670:CDS 45.0%
! TTGTGTTGACAGCTGCACAA+AGG - chr1_3:3513201-3513220 None:intergenic 45.0%
TTTGTGCAGCTGTCAACACA+AGG + chr1_3:3513200-3513219 Msa0097670:CDS 45.0%
GTCAACACAAGGTAGTTGTC+TGG + chr1_3:3513211-3513230 Msa0097670:intron 45.0%
AGTGAATGTGGGGAAAGTTG+AGG + chr1_3:3513665-3513684 Msa0097670:intron 45.0%
GCTATAGCACTATTGCGTAG+CGG + chr1_3:3513923-3513942 Msa0097670:intron 45.0%
GATCGCAGAAAATAGCGGTT+TGG - chr1_3:3513956-3513975 None:intergenic 45.0%
! TGTTACAAAGGGCTCTGGTT+TGG + chr1_3:3514193-3514212 Msa0097670:intron 45.0%
! GTTACAAAGGGCTCTGGTTT+GGG + chr1_3:3514194-3514213 Msa0097670:intron 45.0%
AAGTCGCTTATTTCCTTGCG+TGG + chr1_3:3514467-3514486 Msa0097670:CDS 45.0%
!! TTTATATATTTAAAGAAAAA+TGG - chr1_3:3509800-3509819 None:intergenic 5.0%
CGTCAATGGAAGCTTCTGGA+AGG + chr1_3:3507520-3507539 Msa0097670:CDS 50.0%
GCTGCTCTCAATGGCTTCAA+TGG + chr1_3:3507775-3507794 Msa0097670:CDS 50.0%
CTTATGGGCAGACAAGCAGT+GGG + chr1_3:3508890-3508909 Msa0097670:CDS 50.0%
GGGAAGACGTTCACGATGAA+TGG + chr1_3:3508910-3508929 Msa0097670:CDS 50.0%
!! AGCGGGGAGTATTTGTTGCA+GGG + chr1_3:3509336-3509355 Msa0097670:intron 50.0%
CGTATACTCCAACCTGCTCT+TGG + chr1_3:3510148-3510167 Msa0097670:CDS 50.0%
ATACTCCAACCTGCTCTTGG+TGG + chr1_3:3510151-3510170 Msa0097670:CDS 50.0%
CATTTCCACCAAGAGCAGGT+TGG - chr1_3:3510159-3510178 None:intergenic 50.0%
TTGGCATTTCCACCAAGAGC+AGG - chr1_3:3510163-3510182 None:intergenic 50.0%
! CTCTACCTCTTCTGGTGCTA+CGG - chr1_3:3510203-3510222 None:intergenic 50.0%
TCCATTCAGGGATCTCATGC+TGG + chr1_3:3510916-3510935 Msa0097670:intron 50.0%
CCATTCAGGGATCTCATGCT+GGG + chr1_3:3510917-3510936 Msa0097670:intron 50.0%
CATTCAGGGATCTCATGCTG+GGG + chr1_3:3510918-3510937 Msa0097670:intron 50.0%
GGAGCGTGGTAAGCTTGAAA+TGG + chr1_3:3511096-3511115 Msa0097670:CDS 50.0%
TTGTGGGACGAACGACAATC+AGG + chr1_3:3511213-3511232 Msa0097670:CDS 50.0%
! GGACCTAGATATTTGAGGCG+AGG + chr1_3:3511476-3511495 Msa0097670:CDS 50.0%
GGAAGAGGAGGACTACTATC+TGG - chr1_3:3511617-3511636 None:intergenic 50.0%
GATTGCAGCATAGTTCCCAG+TGG - chr1_3:3513082-3513101 None:intergenic 50.0%
TGGGAACTATGCTGCAATCC+AGG + chr1_3:3513083-3513102 Msa0097670:CDS 50.0%
!! CTCTGGTTTGGGAGGAGAAA+CGG + chr1_3:3514205-3514224 Msa0097670:CDS 50.0%
GCTTATGGGCAGACAAGCAG+TGG + chr1_3:3508889-3508908 Msa0097670:CDS 55.0%
GAATGGTTGTGAGACGGACC+CGG + chr1_3:3508927-3508946 Msa0097670:CDS 55.0%
AATGGTTGTGAGACGGACCC+GGG + chr1_3:3508928-3508947 Msa0097670:CDS 55.0%
CTGCAACAAATACTCCCCGC+TGG - chr1_3:3509337-3509356 None:intergenic 55.0%
!! CAGCGGGGAGTATTTGTTGC+AGG + chr1_3:3509335-3509354 Msa0097670:intron 55.0%
TTGCACCGTAGCACCAGAAG+AGG + chr1_3:3510195-3510214 Msa0097670:CDS 55.0%
CGTAGCACCAGAAGAGGTAG+AGG + chr1_3:3510201-3510220 Msa0097670:intron 55.0%
ACCAGAAGAGGTAGAGGCTG+TGG + chr1_3:3510207-3510226 Msa0097670:intron 55.0%
ACCACAGCCTCTACCTCTTC+TGG - chr1_3:3510211-3510230 None:intergenic 55.0%
TAGGAAGCTTACTCGGGGCA+AGG + chr1_3:3510592-3510611 Msa0097670:intron 55.0%
GCTTACTCGGGGCAAGGAAA+TGG + chr1_3:3510598-3510617 Msa0097670:intron 55.0%
CCCAGCATGAGATCCCTGAA+TGG - chr1_3:3510920-3510939 None:intergenic 55.0%
!! ACAAAGGGCTCTGGTTTGGG+AGG + chr1_3:3514197-3514216 Msa0097670:intron 55.0%
GGTCTTAAGATCGCCACGCA+AGG - chr1_3:3514483-3514502 None:intergenic 55.0%
ACTGCCCGAGGAATCACTCC+CGG - chr1_3:3508949-3508968 None:intergenic 60.0%
CGGACCCGGGAGTGATTCCT+CGG + chr1_3:3508941-3508960 Msa0097670:CDS 65.0%
GGACCCGGGAGTGATTCCTC+GGG + chr1_3:3508942-3508961 Msa0097670:CDS 65.0%
CTGCCCGAGGAATCACTCCC+GGG - chr1_3:3508948-3508967 None:intergenic 65.0%
! TGCTGGGGTGCTCGAGCAAG+AGG + chr1_3:3510933-3510952 Msa0097670:CDS 65.0%
GCACTGTGTGGCTAGTGCGC+TGG + chr1_3:3512149-3512168 Msa0097670:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 3507295 3514683 3507295 ID=Msa0097670;Name=Msa0097670
chr1_3 mRNA 3507295 3514683 3507295 ID=Msa0097670-mRNA-1;Parent=Msa0097670;Name=Msa0097670-mRNA-1;_AED=0.11;_eAED=0.11;_QI=172|0.94|0.94|1|1|1|18|115|833
chr1_3 exon 3507295 3507611 3507295 ID=Msa0097670-mRNA-1:exon:1064;Parent=Msa0097670-mRNA-1
chr1_3 exon 3507707 3507796 3507707 ID=Msa0097670-mRNA-1:exon:1065;Parent=Msa0097670-mRNA-1
chr1_3 exon 3508878 3508996 3508878 ID=Msa0097670-mRNA-1:exon:1066;Parent=Msa0097670-mRNA-1
chr1_3 exon 3509085 3509249 3509085 ID=Msa0097670-mRNA-1:exon:1067;Parent=Msa0097670-mRNA-1
chr1_3 exon 3509338 3509419 3509338 ID=Msa0097670-mRNA-1:exon:1068;Parent=Msa0097670-mRNA-1
chr1_3 exon 3509520 3509587 3509520 ID=Msa0097670-mRNA-1:exon:1069;Parent=Msa0097670-mRNA-1
chr1_3 exon 3509697 3509774 3509697 ID=Msa0097670-mRNA-1:exon:1070;Parent=Msa0097670-mRNA-1
chr1_3 exon 3509872 3510014 3509872 ID=Msa0097670-mRNA-1:exon:1071;Parent=Msa0097670-mRNA-1
chr1_3 exon 3510114 3510216 3510114 ID=Msa0097670-mRNA-1:exon:1072;Parent=Msa0097670-mRNA-1
chr1_3 exon 3510308 3510388 3510308 ID=Msa0097670-mRNA-1:exon:1073;Parent=Msa0097670-mRNA-1
chr1_3 exon 3510787 3510855 3510787 ID=Msa0097670-mRNA-1:exon:1074;Parent=Msa0097670-mRNA-1
chr1_3 exon 3510925 3510984 3510925 ID=Msa0097670-mRNA-1:exon:1075;Parent=Msa0097670-mRNA-1
chr1_3 exon 3511088 3511234 3511088 ID=Msa0097670-mRNA-1:exon:1076;Parent=Msa0097670-mRNA-1
chr1_3 exon 3511476 3511769 3511476 ID=Msa0097670-mRNA-1:exon:1077;Parent=Msa0097670-mRNA-1
chr1_3 exon 3512257 3512349 3512257 ID=Msa0097670-mRNA-1:exon:1078;Parent=Msa0097670-mRNA-1
chr1_3 exon 3512737 3512895 3512737 ID=Msa0097670-mRNA-1:exon:1079;Parent=Msa0097670-mRNA-1
chr1_3 exon 3512982 3513221 3512982 ID=Msa0097670-mRNA-1:exon:1080;Parent=Msa0097670-mRNA-1
chr1_3 exon 3514203 3514683 3514203 ID=Msa0097670-mRNA-1:exon:1081;Parent=Msa0097670-mRNA-1
chr1_3 five_prime_UTR 3507295 3507466 3507295 ID=Msa0097670-mRNA-1:five_prime_utr;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3507467 3507611 3507467 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3507707 3507796 3507707 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3508878 3508996 3508878 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3509085 3509249 3509085 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3509338 3509419 3509338 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3509520 3509587 3509520 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3509697 3509774 3509697 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3509872 3510014 3509872 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3510114 3510216 3510114 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3510308 3510388 3510308 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3510787 3510855 3510787 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3510925 3510984 3510925 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3511088 3511234 3511088 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3511476 3511769 3511476 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3512257 3512349 3512257 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3512737 3512895 3512737 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3512982 3513221 3512982 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 CDS 3514203 3514568 3514203 ID=Msa0097670-mRNA-1:cds;Parent=Msa0097670-mRNA-1
chr1_3 three_prime_UTR 3514569 3514683 3514569 ID=Msa0097670-mRNA-1:three_prime_utr;Parent=Msa0097670-mRNA-1
Gene Sequence

>Msa0097670

ATGGAAAAAATCTGCGTTGCCGTTAGAGTTCGTCCTCTCGTTTCTTCAGATTCCGTCAATGGAAGCTTCTGGAAGGTCCACGATAACCGCATTTCTCTTCACAAGATCCATGGAACTCCTCTCTCTAACTCTTCATATGCTTTCGATCATGTATTCGATGAATCTAGCTCGAATTCAAGTGTTTATGAGATTCTCACTAAGGATATCATTCTCGCTGCTCTCAATGGCTTCAATGGGACTGCATTTGCTTATGGGCAGACAAGCAGTGGGAAGACGTTCACGATGAATGGTTGTGAGACGGACCCGGGAGTGATTCCTCGGGCAGTCAAAGATATATTTTCAAAAATTGAGACGATGACTGAACGAGAGTTTTTAATTCGAGTTTCATACATGGAGATTTATAACGAAGAGATTAATGACCTTCTTGTTGTTGAAAATCAGAAATTGCAAATTCATGAGAGTCTGGAGGTTGGTTACTTGTCACTTAACTTTGCTTTTTCTTTTGTGGTTAATGTTGGTCGGGGAGTATTTGTTGCAGGGATCCGAGAAGAAATTGTCAATAATGCTGAACAAGTTCTAGATCTCCTTAAAGTAGGGGAAGTGAATAGGCACTTTGGTGAGACAAATATGAATGTAAGGAGTAGCAGATCACATACAATATTTAGAATGGTGATTGAAAGCAAAGGGAAGGATTCTGATTCTTCCGATGATAGTTCAATAAGTGACATTGTTCGAGTTTCAGTCTTGAATTTAGTAGATCTTGCTGGCTCTGAAAGGATTGCAAAGACTGGAGCTGATGGAGTACGTTTGAAAGAAGGAAAATACATTAACAAAAGCTTGATGATTCTAGGAAATGTTATTAATAAATTAAGTGAGGGCTCAAAAAATAGAGGACATATCCCATATCGTGATAGTAAATTAACACGTATACTCCAACCTGCTCTTGGTGGAAATGCCAAAACATCCATTATTTGCACCGTAGCACCAGAAGAGGTTCACATTGAAGAAACAAAGGGAACTCTTCAGTTTGCTAGTAGAGCCAAACGCATCACCAATTGTGTTCAAGTGAATGAGATTCTAACAGATGCAGCCTTGTTAAAGCGGCAACAGCTAGAGATAGAAGAGCTACGTAAGAAACTTGAGGGATCTCATGCTGGGGTGCTCGAGCAAGAGGTTCTTAAACTCAGGAACGATTTACTCAAGTATGAAATGGAGCGTGGTAAGCTTGAAATGGAACTGGAAGAGGAGAGGAAATCACGTAATCAATGGATTAGCGAGCAACAGAAGAAAATTGAAAATTCCAGTACCACATCATTCTCAGTCTCAGATTGTGGGACGAACGACAATCAGGGACCTAGATATTTGAGGCGAGGATTAATTGAAGAGTACAGTGACATTAATAGTACATCTCAAGGAGATATATTTAAATCTCCCTGTTTAAAGACAGCCAGTGCTTTTGTTGTCAAGCGATCAAGAAATTCAACATTGCCAGATAGTAGTCCTCCTCTTCCAGAATCTTTCAGCAATGTGGCTGACGAAGATATGTGGTTGAAAATGAACAATGGCTACGTTGCGGACCTTGATTCTCTTCAAATTACTCCCACTCGAAATATTCAATCATTCCCACTAAGTGATACAACTCCTGGTTGTATAAGTCAAACTGCAAAGTATGAACGAGAGGTTCAAGATTTGAGAAGACAACTAGAGCTTGCAAATGAAAAGATAAATGAACTGGAGAGAAAGAATTCAGAGGAAGTACCGTCAAACAAGCAACTAATAGGCGAAATCTCAGACAATCAACAAGAAACACCGCTAATTCAAGAATTGCCTATGAGGTTATCAGAATCTGTGGAAAACTACAAAGATAGCTTTGAGGAGGTTTTATCAGTAATGCAGAGATTTGCATTGGATGGAAAAGTCTCAACAGATAAAATGCTTTCAACCATGAGTGAAATTGGTGCAAATCTATTTGCAGCTTTGGAAGGTCACTTTTCCACTGGGAACTATGCTGCAATCCAGGAACAACAAAAAGAGGTTCGTGAGAGGATGAATAATTTAATTACATCACTGGAGTTATCAGAAAGCTCAATAACAGGAAATCAAAAGAGGACTCCTTTGTGCAGCTGTCAACACAAGGGCTCTGGTTTGGGAGGAGAAACGGAATCTGATTACTCAAAGGATGCTTTAACTGAAAGATACGAAAGCCTCGAAAGGGAGTTACAACTTTTGAAGATCGAAAGAGACTCTTTGCTAGAGAAGTTCTCTGAATCGTCTGATAAACTTGCAATTGTGTCAAGCCAAAGGGAAAATGCTTTGAAAGATTTAAACATTGAAGTACAGAGAAGGAAAAATCTAGAAGGGGAGGTTAAGCAATTTACTGCAGCTTTTGTCTGTCGTCAGAAGTCGCTTATTTCCTTGCGTGGCGATCTTAAGACCAAAATTGAGAAATGGAGAGCTCATACACCAATTTCAGTGCCAAAATCTTTTGGGTGTCAAGACTAA
Protein sequence

>Msa0097670

MEKICVAVRVRPLVSSDSVNGSFWKVHDNRISLHKIHGTPLSNSSYAFDHVFDESSSNSSVYEILTKDIILAALNGFNGTAFAYGQTSSGKTFTMNGCETDPGVIPRAVKDIFSKIETMTEREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLEVGYLSLNFAFSFVVNVGRGVFVAGIREEIVNNAEQVLDLLKVGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKDSDSSDDSSISDIVRVSVLNLVDLAGSERIAKTGADGVRLKEGKYINKSLMILGNVINKLSEGSKNRGHIPYRDSKLTRILQPALGGNAKTSIICTVAPEEVHIEETKGTLQFASRAKRITNCVQVNEILTDAALLKRQQLEIEELRKKLEGSHAGVLEQEVLKLRNDLLKYEMERGKLEMELEEERKSRNQWISEQQKKIENSSTTSFSVSDCGTNDNQGPRYLRRGLIEEYSDINSTSQGDIFKSPCLKTASAFVVKRSRNSTLPDSSPPLPESFSNVADEDMWLKMNNGYVADLDSLQITPTRNIQSFPLSDTTPGCISQTAKYEREVQDLRRQLELANEKINELERKNSEEVPSNKQLIGEISDNQQETPLIQELPMRLSESVENYKDSFEEVLSVMQRFALDGKVSTDKMLSTMSEIGANLFAALEGHFSTGNYAAIQEQQKEVRERMNNLITSLELSESSITGNQKRTPLCSCQHKGSGLGGETESDYSKDALTERYESLERELQLLKIERDSLLEKFSESSDKLAIVSSQRENALKDLNIEVQRRKNLEGEVKQFTAAFVCRQKSLISLRGDLKTKIEKWRAHTPISVPKSFGCQD*