AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0097890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097890 MtrunA17_Chr1g0152231 94.238 833 31 1 1 833 1 816 0.0 1591
Msa0097890 MtrunA17_Chr1g0193221 57.792 462 159 8 1 457 1 431 1.22e-167 519
Msa0097890 MtrunA17_Chr4g0035661 42.686 417 196 8 2 412 88 467 1.15e-91 311
Msa0097890 MtrunA17_Chr3g0145071 41.743 436 209 9 2 429 98 496 2.35e-91 311
Msa0097890 MtrunA17_Chr7g0258991 38.398 487 249 9 2 467 72 528 5.55e-87 297
Msa0097890 MtrunA17_Chr6g0483701 41.014 434 192 11 2 422 29 411 5.10e-83 286
Msa0097890 MtrunA17_Chr5g0405181 41.371 394 184 9 2 383 19 377 4.17e-79 275
Msa0097890 MtrunA17_Chr8g0372171 40.979 388 194 6 2 383 18 376 1.14e-78 275
Msa0097890 MtrunA17_Chr4g0070001 39.810 422 199 8 2 421 142 510 2.92e-77 271
Msa0097890 MtrunA17_Chr3g0132921 37.875 433 228 15 2 417 8 416 8.66e-76 256
Msa0097890 MtrunA17_Chr4g0036001 41.927 384 190 8 2 381 23 377 1.00e-75 264
Msa0097890 MtrunA17_Chr3g0142261 40.102 394 202 6 2 390 18 382 2.99e-71 256
Msa0097890 MtrunA17_Chr5g0427481 38.140 430 216 12 6 413 20 421 8.03e-68 245
Msa0097890 MtrunA17_Chr2g0327581 38.718 390 206 7 45 421 95 464 2.66e-67 242
Msa0097890 MtrunA17_Chr7g0266631 41.880 351 168 7 46 380 56 386 5.44e-66 238
Msa0097890 MtrunA17_Chr1g0182151 37.441 422 220 10 46 447 101 498 1.02e-65 238
Msa0097890 MtrunA17_Chr1g0178411 42.319 345 169 7 46 377 60 387 6.69e-65 235
Msa0097890 MtrunA17_Chr1g0153061 37.403 385 218 10 4 372 9 386 1.60e-64 234
Msa0097890 MtrunA17_Chr3g0134191 36.446 439 241 14 2 417 5 428 1.90e-64 234
Msa0097890 MtrunA17_Chr4g0053211 38.200 411 230 12 4 396 13 417 2.33e-64 233
Msa0097890 MtrunA17_Chr3g0122121 38.945 398 186 10 6 380 101 464 1.22e-61 226
Msa0097890 MtrunA17_Chr8g0377731 36.444 450 210 13 6 416 58 470 2.66e-60 222
Msa0097890 MtrunA17_Chr2g0322291 38.677 393 197 8 4 380 89 453 3.06e-60 223
Msa0097890 MtrunA17_Chr4g0069141 37.722 395 194 12 6 380 156 518 4.47e-60 223
Msa0097890 MtrunA17_Chr7g0245931 32.265 468 276 11 3 452 52 496 5.67e-60 219
Msa0097890 MtrunA17_Chr5g0398521 32.979 470 261 13 3 441 57 503 1.19e-59 218
Msa0097890 MtrunA17_Chr4g0045381 39.084 371 180 10 6 358 196 538 8.56e-57 213
Msa0097890 MtrunA17_Chr4g0062291 35.165 364 188 7 3 350 123 454 4.61e-56 205
Msa0097890 MtrunA17_Chr2g0307481 34.254 362 191 7 3 350 68 396 6.21e-56 204
Msa0097890 MtrunA17_Chr1g0191851 35.181 469 233 15 4 454 148 563 9.29e-53 197
Msa0097890 MtrunA17_Chr1g0192481 35.385 390 210 12 4 381 59 418 1.39e-51 190
Msa0097890 MtrunA17_Chr1g0195111 35.476 389 212 11 4 382 397 756 3.81e-51 194
Msa0097890 MtrunA17_Chr5g0447041 31.089 505 267 15 4 472 435 894 1.18e-50 193
Msa0097890 MtrunA17_Chr3g0102921 32.271 502 271 15 4 491 439 885 1.01e-49 190
Msa0097890 MtrunA17_Chr2g0312631 37.677 353 186 10 4 350 385 709 1.01e-49 189
Msa0097890 MtrunA17_Chr7g0271961 37.879 396 194 15 4 384 402 760 1.99e-49 189
Msa0097890 MtrunA17_Chr8g0369881 37.013 308 166 6 46 352 918 1198 5.04e-49 188
Msa0097890 MtrunA17_Chr2g0280421 35.511 352 191 9 4 346 438 762 5.17e-49 186
Msa0097890 MtrunA17_Chr7g0272871 34.989 443 216 13 4 420 128 524 8.17e-49 184
Msa0097890 MtrunA17_Chr5g0407791 36.364 308 168 5 46 352 932 1212 2.98e-48 186
Msa0097890 MtrunA17_Chr4g0042061 34.890 364 190 9 4 347 433 769 2.58e-47 181
Msa0097890 MtrunA17_Chr2g0319271 35.411 353 202 9 4 346 400 736 2.68e-47 180
Msa0097890 MtrunA17_Chr7g0257301 35.854 357 181 12 46 381 436 765 4.55e-47 181
Msa0097890 MtrunA17_Chr5g0411971 34.540 359 194 8 36 383 434 762 8.28e-47 181
Msa0097890 MtrunA17_Chr5g0421521 34.278 353 191 8 6 350 377 696 3.92e-46 178
Msa0097890 MtrunA17_Chr5g0421591 34.085 355 193 8 4 350 375 696 2.08e-45 176
Msa0097890 MtrunA17_Chr1g0191181 32.718 379 226 9 4 381 89 439 3.23e-45 172
Msa0097890 MtrunA17_Chr4g0049011 35.370 311 179 8 46 350 324 618 3.09e-44 169
Msa0097890 MtrunA17_Chr3g0101021 32.432 370 207 9 38 387 100 446 3.95e-43 169
Msa0097890 MtrunA17_Chr5g0445211 31.818 374 209 8 6 362 77 421 5.79e-42 166
Msa0097890 MtrunA17_Chr7g0238581 30.270 370 205 10 1 354 23 355 5.56e-39 154
Msa0097890 MtrunA17_Chr2g0331761 33.148 359 196 12 3 351 185 509 1.22e-37 150
Msa0097890 MtrunA17_Chr6g0485471 33.058 363 191 12 3 351 115 439 9.81e-37 147
Msa0097890 MtrunA17_Chr2g0295881 29.638 469 239 18 3 412 197 633 1.11e-35 145
Msa0097890 MtrunA17_Chr4g0067421 32.065 368 199 13 3 351 205 540 1.42e-35 145
Msa0097890 MtrunA17_Chr7g0269681 41.837 196 98 6 186 380 41 221 3.85e-31 128
Msa0097890 MtrunA17_Chr8g0386891 38.785 214 106 6 186 387 4 204 1.58e-30 125
Msa0097890 MtrunA17_Chr8g0367581 29.877 405 238 12 42 437 185 552 1.78e-28 123
Msa0097890 MtrunA17_Chr3g0142841 30.031 323 163 9 47 350 144 422 1.93e-26 116
Msa0097890 MtrunA17_Chr6g0484501 43.478 161 79 2 186 346 34 182 2.32e-23 100
Msa0097890 MtrunA17_Chr8g0390991 35.124 242 131 9 186 417 4 229 2.84e-23 105
Msa0097890 MtrunA17_Chr1g0187411 25.234 428 231 13 63 432 185 581 9.80e-21 97.8
Msa0097890 MtrunA17_Chr8g0386901 35.570 149 83 5 4 142 484 629 4.29e-14 76.3
Msa0097890 MtrunA17_Chr7g0269691 33.108 148 92 4 4 145 401 547 1.02e-12 71.6
Msa0097890 MtrunA17_Chr8g0390981 38.318 107 58 5 45 145 559 663 2.61e-11 67.4
Msa0097890 MtrunA17_Chr6g0484511 37.736 106 54 4 45 142 333 434 3.38e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097890 AT1G59540.1 54.333 854 312 19 1 816 1 814 0.0 827
Msa0097890 AT1G59540.2 51.974 760 289 18 95 816 1 722 0.0 682
Msa0097890 AT3G10180.2 53.346 523 203 12 1 516 1 489 1.57e-156 490
Msa0097890 AT3G10180.1 53.346 523 203 12 1 516 1 489 1.83e-156 490
Msa0097890 AT2G21380.2 43.373 415 192 9 4 412 105 482 1.40e-89 306
Msa0097890 AT2G21380.1 43.373 415 192 9 4 412 105 482 1.40e-89 306
Msa0097890 AT4G39050.1 42.892 415 198 8 2 412 97 476 6.49e-89 304
Msa0097890 AT3G12020.4 42.417 422 197 10 2 412 68 454 9.62e-88 299
Msa0097890 AT3G12020.1 42.417 422 197 10 2 412 68 454 9.62e-88 299
Msa0097890 AT3G12020.3 42.417 422 197 10 2 412 68 454 4.51e-87 299
Msa0097890 AT3G12020.2 42.417 422 197 10 2 412 68 454 4.51e-87 299
Msa0097890 AT5G06670.8 40.000 430 223 7 2 429 65 461 2.07e-86 290
Msa0097890 AT5G06670.4 40.000 430 223 7 2 429 65 461 2.07e-86 290
Msa0097890 AT5G06670.7 40.000 430 223 7 2 429 65 461 2.07e-86 290
Msa0097890 AT5G06670.5 40.000 430 223 7 2 429 65 461 2.70e-86 290
Msa0097890 AT5G06670.2 40.000 430 223 7 2 429 65 461 1.88e-84 290
Msa0097890 AT5G06670.3 40.000 430 223 7 2 429 65 461 1.88e-84 290
Msa0097890 AT1G21730.1 43.342 383 181 8 2 380 74 424 1.16e-83 286
Msa0097890 AT3G43210.3 39.821 447 227 8 2 444 28 436 9.51e-83 285
Msa0097890 AT3G43210.5 39.821 447 227 8 2 444 28 436 9.51e-83 285
Msa0097890 AT3G43210.2 39.821 447 227 8 2 444 28 436 9.51e-83 285
Msa0097890 AT3G43210.4 39.821 447 227 8 2 444 28 436 9.51e-83 285
Msa0097890 AT3G43210.1 39.821 447 227 8 2 444 28 436 9.51e-83 285
Msa0097890 AT1G18370.1 42.032 433 195 12 2 418 30 422 5.55e-82 283
Msa0097890 AT5G06670.6 39.180 439 223 8 2 429 65 470 9.72e-82 283
Msa0097890 AT5G06670.1 39.180 439 223 8 2 429 65 470 9.72e-82 283
Msa0097890 AT5G66310.2 37.500 448 227 9 2 425 17 435 1.13e-79 278
Msa0097890 AT5G66310.3 37.500 448 227 9 2 425 17 435 1.13e-79 278
Msa0097890 AT5G66310.1 37.500 448 227 9 2 425 17 435 1.13e-79 278
Msa0097890 AT3G51150.2 40.519 385 194 7 2 380 16 371 4.73e-78 273
Msa0097890 AT3G51150.4 40.519 385 194 7 2 380 16 371 4.73e-78 273
Msa0097890 AT3G51150.3 40.519 385 194 7 2 380 16 371 4.73e-78 273
Msa0097890 AT3G51150.1 40.519 385 194 7 2 380 16 371 5.31e-78 273
Msa0097890 AT4G24170.1 41.623 382 190 8 2 380 5 356 1.10e-77 272
Msa0097890 AT4G24170.2 41.623 382 190 8 2 380 5 356 1.10e-77 272
Msa0097890 AT4G38950.3 38.915 424 224 7 2 421 12 404 5.64e-77 267
Msa0097890 AT4G38950.5 38.915 424 224 7 2 421 12 404 5.64e-77 267
Msa0097890 AT4G38950.4 38.915 424 224 7 2 421 12 404 5.64e-77 267
Msa0097890 AT4G38950.1 38.915 424 224 7 2 421 12 404 5.64e-77 267
Msa0097890 AT4G38950.2 38.915 424 224 7 2 421 12 404 5.64e-77 267
Msa0097890 AT2G21300.2 37.647 425 227 8 2 421 23 414 2.90e-75 263
Msa0097890 AT2G21300.4 37.647 425 227 8 2 421 23 414 2.90e-75 263
Msa0097890 AT2G21300.3 37.647 425 227 8 2 421 23 414 2.90e-75 263
Msa0097890 AT2G21300.1 37.647 425 227 8 2 421 23 414 2.90e-75 263
Msa0097890 AT2G21300.5 37.647 425 227 8 2 421 23 414 2.90e-75 263
Msa0097890 AT2G28620.3 39.744 390 204 7 4 380 51 422 5.43e-72 256
Msa0097890 AT2G28620.2 39.744 390 204 7 4 380 51 422 5.43e-72 256
Msa0097890 AT2G28620.1 39.744 390 204 7 4 380 51 422 7.40e-72 256
Msa0097890 AT5G60930.1 38.902 437 232 14 2 417 5 427 1.14e-71 257
Msa0097890 AT5G60930.3 38.902 437 232 14 2 417 5 427 1.15e-71 257
Msa0097890 AT5G60930.2 38.902 437 232 14 2 417 5 427 1.16e-71 257
Msa0097890 AT5G47820.2 37.327 434 243 14 4 417 12 436 6.22e-70 250
Msa0097890 AT5G47820.1 37.327 434 243 14 4 417 12 436 6.22e-70 250
Msa0097890 AT3G45850.2 41.279 344 175 6 46 380 102 427 3.39e-67 243
Msa0097890 AT3G45850.1 41.279 344 175 6 46 380 102 427 3.39e-67 243
Msa0097890 AT2G36200.1 41.311 351 176 7 46 383 59 392 6.93e-66 238
Msa0097890 AT2G36200.2 38.821 407 205 10 46 439 59 434 9.33e-66 238
Msa0097890 AT3G63480.2 40.557 323 158 7 45 359 47 343 7.83e-65 224
Msa0097890 AT2G37420.1 39.828 349 179 8 46 383 95 423 8.25e-64 232
Msa0097890 AT2G37420.2 39.828 349 179 8 46 383 95 423 8.25e-64 232
Msa0097890 AT3G63480.1 40.061 327 158 8 45 359 47 347 4.38e-63 220
Msa0097890 AT4G14150.1 36.018 447 219 10 6 415 94 510 4.51e-62 228
Msa0097890 AT3G23670.2 38.950 362 173 8 41 381 126 460 8.12e-61 223
Msa0097890 AT3G50240.2 35.202 446 237 12 4 420 26 448 2.03e-60 221
Msa0097890 AT3G23670.1 36.776 397 195 9 6 381 99 460 2.05e-60 223
Msa0097890 AT3G19050.1 38.642 383 191 9 6 371 196 551 4.80e-60 223
Msa0097890 AT3G50240.4 35.202 446 237 12 4 420 26 448 1.05e-59 220
Msa0097890 AT3G50240.1 35.202 446 237 12 4 420 26 448 1.07e-59 220
Msa0097890 AT3G54870.1 36.220 381 202 9 35 406 139 487 1.36e-59 219
Msa0097890 AT3G54870.3 36.220 381 202 9 35 406 139 487 1.36e-59 219
Msa0097890 AT3G17360.3 40.000 370 178 9 6 358 171 513 2.18e-59 221
Msa0097890 AT3G17360.1 40.000 370 178 9 6 358 171 513 2.34e-59 221
Msa0097890 AT3G17360.2 40.000 370 178 9 6 358 171 513 2.46e-59 221
Msa0097890 AT3G54870.2 36.220 381 202 9 35 406 139 487 2.68e-59 219
Msa0097890 AT3G44050.1 39.086 394 194 10 4 380 94 458 4.81e-58 216
Msa0097890 AT1G12430.1 34.772 394 212 10 3 376 70 438 3.30e-57 212
Msa0097890 AT1G12430.2 34.772 394 212 10 3 376 70 438 3.68e-57 212
Msa0097890 AT1G18550.1 35.813 363 186 8 3 350 151 481 4.10e-56 206
Msa0097890 AT1G01950.1 35.550 391 213 9 3 376 60 428 1.19e-55 207
Msa0097890 AT1G01950.2 35.550 391 213 9 3 376 60 428 1.36e-55 207
Msa0097890 AT3G49650.1 36.443 343 183 6 46 380 66 381 1.67e-55 206
Msa0097890 AT1G01950.3 35.550 391 213 9 3 376 60 428 2.05e-55 206
Msa0097890 AT2G47500.2 35.800 419 223 14 4 411 400 783 3.54e-53 200
Msa0097890 AT2G47500.1 35.800 419 223 14 4 411 400 783 4.80e-53 200
Msa0097890 AT5G27550.2 35.104 433 229 13 4 420 133 529 1.06e-52 197
Msa0097890 AT5G27550.1 35.104 433 229 13 4 420 133 529 1.06e-52 197
Msa0097890 AT3G44730.2 34.077 493 256 18 46 510 468 919 1.49e-52 199
Msa0097890 AT3G44730.3 34.077 493 256 18 46 510 468 919 1.49e-52 199
Msa0097890 AT3G44730.1 34.077 493 256 18 46 510 423 874 1.76e-52 199
Msa0097890 AT3G44730.4 34.077 493 256 18 46 510 423 874 1.76e-52 199
Msa0097890 AT1G72250.2 32.649 487 278 13 45 526 544 985 9.22e-52 197
Msa0097890 AT1G72250.1 32.649 487 278 13 45 526 535 976 1.11e-51 196
Msa0097890 AT1G72250.3 32.649 487 278 13 45 526 556 997 1.24e-51 196
Msa0097890 AT1G72250.4 32.649 487 278 13 45 526 555 996 1.30e-51 196
Msa0097890 AT5G65930.2 38.141 312 157 7 46 352 931 1211 1.71e-51 196
Msa0097890 AT5G65930.1 38.141 312 157 7 46 352 930 1210 1.76e-51 196
Msa0097890 AT5G65930.3 38.141 312 157 7 46 352 937 1217 2.14e-51 196
Msa0097890 AT1G09170.4 38.421 380 186 15 4 369 435 780 2.21e-50 191
Msa0097890 AT1G55550.1 33.796 432 253 10 4 435 92 490 2.40e-50 191
Msa0097890 AT1G09170.5 38.421 380 186 15 4 369 435 780 2.97e-50 192
Msa0097890 AT1G09170.2 38.421 380 186 15 4 369 435 780 4.25e-50 191
Msa0097890 AT3G51150.5 45.982 224 112 4 157 380 4 218 4.50e-50 191
Msa0097890 AT1G09170.3 38.158 380 187 15 4 369 435 780 4.60e-50 190
Msa0097890 AT1G09170.7 38.158 380 187 15 4 369 435 780 4.60e-50 190
Msa0097890 AT2G22610.1 33.117 462 239 14 4 432 418 842 1.80e-49 189
Msa0097890 AT2G22610.2 33.117 462 239 14 4 432 418 842 1.86e-49 189
Msa0097890 AT2G22610.3 33.117 462 239 14 4 432 419 843 1.91e-49 189
Msa0097890 AT5G54670.3 36.544 353 194 10 4 346 337 669 7.84e-49 184
Msa0097890 AT5G54670.1 36.544 353 194 10 4 346 397 729 1.85e-48 184
Msa0097890 AT5G54670.2 36.544 353 194 10 4 346 397 729 1.85e-48 184
Msa0097890 AT4G05190.1 36.158 354 198 11 4 346 429 765 3.87e-48 184
Msa0097890 AT4G05190.2 36.158 354 198 11 4 346 416 752 5.00e-48 183
Msa0097890 AT4G27180.1 36.544 353 194 10 4 346 388 720 1.10e-47 182
Msa0097890 AT4G27180.2 36.544 353 194 10 4 346 388 720 1.10e-47 182
Msa0097890 AT3G10310.2 35.859 396 188 16 4 381 364 711 1.96e-47 183
Msa0097890 AT3G10310.1 35.859 396 188 17 4 381 364 711 2.00e-47 182
Msa0097890 AT3G50240.3 36.364 363 184 10 86 420 3 346 2.65e-47 182
Msa0097890 AT5G42490.2 38.567 293 148 6 2 290 8 272 3.15e-47 182
Msa0097890 AT5G42490.1 38.567 293 148 6 2 290 8 272 3.35e-47 182
Msa0097890 AT4G21270.1 35.511 352 203 8 4 346 432 768 4.79e-47 180
Msa0097890 AT5G27000.1 36.232 345 168 12 46 380 440 742 6.14e-47 181
Msa0097890 AT1G63640.2 38.835 309 144 9 46 346 518 789 8.69e-47 181
Msa0097890 AT1G63640.3 38.585 311 149 10 46 346 518 796 2.23e-46 180
Msa0097890 AT1G63640.1 38.585 311 149 10 46 346 518 796 2.28e-46 180
Msa0097890 AT1G63640.4 38.585 311 149 10 46 346 518 796 2.28e-46 180
Msa0097890 AT1G63640.5 38.585 311 149 10 46 346 508 786 2.63e-46 179
Msa0097890 AT5G27950.1 35.484 310 179 6 42 350 115 404 7.45e-45 172
Msa0097890 AT5G41310.1 37.459 307 142 9 46 347 468 729 1.29e-44 174
Msa0097890 AT1G73860.1 35.244 349 183 10 46 377 555 877 2.58e-44 173
Msa0097890 AT1G73860.2 35.244 349 183 10 46 377 472 794 3.81e-44 172
Msa0097890 AT1G18410.4 30.580 448 261 12 4 431 633 1050 4.37e-44 173
Msa0097890 AT1G18410.3 33.333 393 215 11 4 376 490 855 1.07e-43 171
Msa0097890 AT1G18410.2 33.333 393 215 11 4 376 490 855 1.07e-43 171
Msa0097890 AT1G18410.1 30.580 448 253 12 4 431 633 1042 3.29e-43 170
Msa0097890 AT1G18410.5 34.188 351 188 9 4 346 480 795 7.93e-43 169
Msa0097890 AT1G09170.6 38.739 333 157 14 4 323 435 733 8.99e-43 167
Msa0097890 AT1G09170.8 38.739 333 157 14 4 323 435 733 8.99e-43 167
Msa0097890 AT1G01950.4 36.570 309 160 7 82 376 1 287 3.59e-42 165
Msa0097890 AT1G09170.1 35.279 377 166 14 4 369 435 744 6.71e-40 159
Msa0097890 AT3G20150.1 31.565 377 197 12 6 359 107 445 1.13e-39 159
Msa0097890 AT3G20150.2 31.565 377 197 12 6 359 107 445 1.23e-39 159
Msa0097890 AT3G16060.1 32.591 359 198 12 3 351 169 493 3.06e-38 152
Msa0097890 AT3G16630.2 34.066 364 196 13 3 351 193 527 5.08e-38 153
Msa0097890 AT3G16630.1 34.066 364 196 13 3 351 193 527 5.08e-38 153
Msa0097890 AT5G02370.1 31.013 316 178 7 43 357 71 347 8.10e-37 147
Msa0097890 AT5G27950.2 32.982 285 160 6 95 379 1 254 6.03e-32 130
Msa0097890 AT5G65460.2 27.211 441 264 13 4 429 139 537 3.32e-29 125
Msa0097890 AT5G65460.4 27.211 441 264 13 4 429 139 537 3.75e-29 125
Msa0097890 AT5G65460.1 27.211 441 264 13 4 429 139 537 3.91e-29 125
Msa0097890 AT5G65460.6 27.211 441 264 13 4 429 139 537 4.09e-29 125
Msa0097890 AT5G10470.2 27.612 402 228 13 46 429 185 541 4.65e-27 119
Msa0097890 AT5G10470.1 27.612 402 228 13 46 429 185 541 5.02e-27 119
Msa0097890 AT5G65460.3 26.786 448 264 14 4 429 139 544 6.02e-27 119
Msa0097890 AT4G14330.1 25.661 378 233 11 46 416 89 425 4.56e-22 102
Msa0097890 AT1G20060.10 29.524 315 181 6 47 350 164 448 8.74e-20 95.5
Msa0097890 AT1G20060.8 29.524 315 181 6 47 350 164 448 1.05e-19 95.1
Msa0097890 AT1G20060.5 29.524 315 181 6 47 350 164 448 1.11e-19 95.1
Msa0097890 AT1G20060.6 29.524 315 181 6 47 350 164 448 1.13e-19 95.1
Msa0097890 AT1G20060.2 29.524 315 181 6 47 350 164 448 1.13e-19 95.1
Msa0097890 AT1G20060.4 29.524 315 181 6 47 350 164 448 1.16e-19 95.1
Msa0097890 AT1G20060.9 29.524 315 181 6 47 350 164 448 1.23e-19 95.1
Msa0097890 AT1G20060.3 29.524 315 181 6 47 350 164 448 1.24e-19 95.1
Msa0097890 AT1G20060.7 29.524 315 181 6 47 350 164 448 1.50e-19 94.7
Msa0097890 AT5G65460.5 27.044 318 182 9 123 429 13 291 6.91e-16 82.8

Find 169 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAACCTTCCCCTACTTTA+AGG 0.114949 1_3:-3732803 None:intergenic
AGCTCTCCATTTCTCAATTT+TGG 0.173176 1_3:-3738178 None:intergenic
TCTTGACACCCAAAAGATTT+TGG 0.212371 1_3:-3738219 None:intergenic
ATTTCAGTGCCAAAATCTTT+TGG 0.236228 1_3:+3738210 Msa0097890:CDS
GTTAATTTACTATCACGATA+TGG 0.243218 1_3:-3733802 None:intergenic
CTGTTCTTCATGGACTTTCA+TGG 0.248590 1_3:-3730744 None:intergenic
TCAGGGACTGCATTTGCTTA+TGG 0.255929 1_3:+3732270 Msa0097890:intron
GTTACAAAGGGCTCTGGTTT+GGG 0.269494 1_3:+3737871 Msa0097890:intron
AACAAAAGCTTGATGATTCT+AGG 0.281256 1_3:+3733637 Msa0097890:CDS
ACCACAGCCTTTACCTCTTC+TGG 0.281565 1_3:-3733886 None:intergenic
CTTTCAACCATGAGTGAAAT+TGG 0.288084 1_3:+3736701 Msa0097890:CDS
TCATGGACTTTCATGGCATA+TGG 0.288511 1_3:-3730737 None:intergenic
AGTGCATATAATGGATGTTT+TGG 0.288874 1_3:-3733857 None:intergenic
GCCACATTGCTGAAAGATTC+TGG 0.302737 1_3:-3735315 None:intergenic
CAGGGACTGCATTTGCTTAT+GGG 0.302810 1_3:+3732271 Msa0097890:intron
TGTTACAAAGGGCTCTGGTT+TGG 0.309724 1_3:+3737870 Msa0097890:intron
CAGCGGGGAGTATTTGTTGC+AGG 0.320795 1_3:+3732735 Msa0097890:intron
TCCATTCAGGGATCTCATGC+TGG 0.324873 1_3:+3734596 Msa0097890:intron
TGCAAATCTATTTGCAGCTT+TGG 0.331515 1_3:+3736724 Msa0097890:CDS
CCGTCAAACAAGCAACTAAT+AGG 0.342212 1_3:+3736438 Msa0097890:CDS
TCTAACTCTTCCTATGCTTT+CGG 0.365554 1_3:+3731018 Msa0097890:CDS
AGCACTGGCTGTCTTTAAAC+AGG 0.366009 1_3:-3735238 None:intergenic
TTCCACTATTTAGTATGAAA+TGG 0.367613 1_3:+3734755 Msa0097890:intron
CTCATTCACTTGAACACAAT+TGG 0.368194 1_3:-3734044 None:intergenic
GGGGTGGCTGAGAGAAAATT+TGG 0.375033 1_3:+3730710 None:intergenic
ATTCCGTCAATGGAAGCTTC+TGG 0.379986 1_3:+3730944 Msa0097890:CDS
CCTATTAGTTGCTTGTTTGA+CGG 0.390784 1_3:-3736438 None:intergenic
CCATTCAGGGATCTCATGCT+GGG 0.393904 1_3:+3734597 Msa0097890:intron
AAAAGACACCAAGATGTTCA+TGG 0.396562 1_3:-3738258 None:intergenic
CGGAAATACCCTTCGACAAA+CGG 0.403460 1_3:-3730774 None:intergenic
CATGGACTTTCATGGCATAT+GGG 0.407538 1_3:-3730736 None:intergenic
TGGTGCTACAGTGCATATAA+TGG 0.412968 1_3:-3733866 None:intergenic
GTTCTAGATCTCCTTAAAGT+AGG 0.415724 1_3:+3732792 Msa0097890:CDS
GTTTCTTCAGATTCCGTCAA+TGG 0.415988 1_3:+3730934 Msa0097890:CDS
TAGAATTTAGTAGATCTTGC+TGG 0.419494 1_3:+3733553 Msa0097890:intron
AACACAATTGGTGATGCGTT+TGG 0.428947 1_3:-3734032 None:intergenic
TTAATTTACTATCACGATAT+GGG 0.428949 1_3:-3733801 None:intergenic
TTAAGACCAAAATTGAGAAA+TGG 0.434118 1_3:+3738172 Msa0097890:CDS
ATTGCAAATTCATGAGAGTC+TGG 0.440975 1_3:+3732576 Msa0097890:CDS
TTATCAGAAAGCTCAATAAC+AGG 0.442837 1_3:+3736839 Msa0097890:CDS
TTCTAGATCTCCTTAAAGTA+GGG 0.453841 1_3:+3732793 Msa0097890:CDS
GTGAGACAAATATGAATGTA+AGG 0.454372 1_3:+3732935 Msa0097890:CDS
GGAAGAGGAGGACTACTATC+TGG 0.455017 1_3:-3735294 None:intergenic
CTCTGGTTTGGGAGGAGAAA+CGG 0.457880 1_3:+3737882 Msa0097890:CDS
TGAACTATCATCGGAAGAAT+CGG 0.458087 1_3:-3733122 None:intergenic
AAAGTTGTAACTCCCTTTCG+AGG 0.461651 1_3:-3737948 None:intergenic
GGAGCGTGGTAAGCTTGAAA+TGG 0.465250 1_3:+3734776 Msa0097890:CDS
AATCCTCGCCTCAAATATCT+AGG 0.467469 1_3:-3735159 None:intergenic
AAACAGAGATTTGCATTGGA+TGG 0.467595 1_3:+3736656 Msa0097890:intron
GAATAATTTAATTACATCAC+TGG 0.468350 1_3:+3736814 Msa0097890:CDS
ACAGATTCTGATAACCTCAT+AGG 0.470024 1_3:-3736507 None:intergenic
ACAGGAGTTGTATCACTTAG+TGG 0.470293 1_3:-3735429 None:intergenic
GACTGAGAATGATGTGGTAC+TGG 0.471513 1_3:-3734865 None:intergenic
CTTCCAGAAGCTTCCATTGA+CGG 0.477130 1_3:-3730947 None:intergenic
GGGAAGACGTTCACGATGAA+TGG 0.480698 1_3:+3732306 Msa0097890:CDS
CGTATACTCCAACCTGCTCT+TGG 0.484237 1_3:+3733826 Msa0097890:CDS
TGGTAAGCTTGAAATGGAAC+TGG 0.486181 1_3:+3734782 Msa0097890:CDS
TGAAGGTGATTGAAAGCAAA+GGG 0.488492 1_3:+3733092 Msa0097890:intron
TGGGAACTATGCTGCAATCC+AGG 0.489277 1_3:+3736763 Msa0097890:CDS
TTGAACAACAGAAAAGCAAA+TGG 0.489562 1_3:+3730876 Msa0097890:exon
GCTGCTCTCAATGGCTTCAA+TGG 0.492027 1_3:+3731203 Msa0097890:CDS
TGTTTATGAGATTCTCACTA+AGG 0.492427 1_3:+3731169 Msa0097890:CDS
ATCATTCTCGCTGCTCTCAA+TGG 0.492960 1_3:+3731194 Msa0097890:CDS
GCTTGAAATGGAACTGGAAG+AGG 0.495302 1_3:+3734788 Msa0097890:CDS
TAATTCAAGAATTGCCTATG+AGG 0.498435 1_3:+3736493 Msa0097890:CDS
TTTGAATTTCGAGAGATTGA+CGG 0.501817 1_3:-3730794 None:intergenic
AAATGAAAAGATAAATGAAC+TGG 0.504184 1_3:+3736005 Msa0097890:CDS
CTGACCCGGGAGTGATTCCT+CGG 0.505163 1_3:+3732337 Msa0097890:CDS
TTGGCATTTCCACCAAGAGC+AGG 0.507442 1_3:-3733838 None:intergenic
AGAGGAAATCACGTAATCAA+TGG 0.509195 1_3:+3734811 Msa0097890:CDS
AGCAAGAGGTTCTTAAACTC+AGG 0.511662 1_3:+3734627 Msa0097890:CDS
ATTGTAAACCATGAACATCT+TGG 0.513595 1_3:+3738250 Msa0097890:three_prime_UTR
TGCAATTGTGTCAAGCCAAA+GGG 0.513596 1_3:+3738026 Msa0097890:CDS
ATAGGCAATTCTTGAATTAG+CGG 0.515399 1_3:-3736489 None:intergenic
TGTTGTTCAAACTTTGGAGC+GGG 0.516041 1_3:-3730863 None:intergenic
GTTCACATTGAAGAAACAAA+GGG 0.516944 1_3:+3733986 Msa0097890:CDS
ATTTGCACCAATTTCACTCA+TGG 0.518475 1_3:-3736708 None:intergenic
GATGGAGTACGTTTGAAAGA+AGG 0.520486 1_3:+3733604 Msa0097890:CDS
GCATAGGAAGAGTTAGAGAG+AGG 0.521290 1_3:-3731012 None:intergenic
AATCTATTTGCAGCTTTGGA+AGG 0.521698 1_3:+3736728 Msa0097890:CDS
TTGCTGAAAGATTCTGGAAG+AGG 0.522298 1_3:-3735309 None:intergenic
AGCGGGGAGTATTTGTTGCA+GGG 0.523146 1_3:+3732736 Msa0097890:intron
AGAAAATATCCGTTTGTCGA+AGG 0.523459 1_3:+3730765 Msa0097890:five_prime_UTR
TCATTCTCAGTCTCAGATTG+TGG 0.524428 1_3:+3734876 Msa0097890:CDS
TTGTGGGACGAACAACAATC+AGG 0.526980 1_3:+3734893 Msa0097890:CDS
ATTGCAAAGACTGGAGCTGA+TGG 0.527407 1_3:+3733586 Msa0097890:CDS
ATCACATACAATATTTAGAA+TGG 0.527414 1_3:+3732966 Msa0097890:CDS
TCCTAAACAGAGATTTGCAT+TGG 0.528814 1_3:+3736652 Msa0097890:intron
CATTCTCAGTCTCAGATTGT+GGG 0.529433 1_3:+3734877 Msa0097890:CDS
CTGCCCGAGGAATCACTCCC+GGG 0.533694 1_3:-3732341 None:intergenic
GAAAATATCCGTTTGTCGAA+GGG 0.534095 1_3:+3730766 Msa0097890:five_prime_UTR
ACTGCCCGAGGAATCACTCC+CGG 0.534724 1_3:-3732342 None:intergenic
TGCTGGGGTGCTCGAGCAAG+AGG 0.535240 1_3:+3734613 Msa0097890:CDS
CATTGTTCGAGTTTCAGTCT+TGG 0.535573 1_3:+3733153 Msa0097890:CDS
GTTAGGGACCTAGATATTTG+AGG 0.536811 1_3:+3735151 Msa0097890:intron
CATTTCCACCAAGAGCAGGT+TGG 0.537014 1_3:-3733834 None:intergenic
TAGCTGTTGCCGCTTTAACA+AGG 0.540932 1_3:-3734482 None:intergenic
CAGGAGTTGTATCACTTAGT+GGG 0.543032 1_3:-3735428 None:intergenic
ATACTCCAACCTGCTCTTGG+TGG 0.543213 1_3:+3733829 Msa0097890:CDS
CAGATGCAGCCTTGTTAAAG+CGG 0.545444 1_3:+3734473 Msa0097890:CDS
TTGCAATTGTGTCAAGCCAA+AGG 0.545920 1_3:+3738025 Msa0097890:CDS
GCTTATGGGCAGACAAGCAG+TGG 0.547053 1_3:+3732285 Msa0097890:CDS
TTTACAGTGAACAGGCACTT+TGG 0.548092 1_3:+3732913 Msa0097890:intron
TCTGAAAGGATTGCAAAGAC+TGG 0.549765 1_3:+3733577 Msa0097890:CDS
AGTTAGAGAGAGGAGTTCCA+TGG 0.554555 1_3:-3731002 None:intergenic
TGTTATTAATAAATTAAGTG+AGG 0.556487 1_3:+3733663 Msa0097890:CDS
AAAGATACGAAAGCCTCGAA+AGG 0.559844 1_3:+3737935 Msa0097890:CDS
AACGAGAGGACGAACTCTAA+CGG 0.559929 1_3:-3730914 None:intergenic
GACATTAATAGTACATCTCA+AGG 0.561057 1_3:+3735198 Msa0097890:CDS
GGTTCACATTGAAGAAACAA+AGG 0.561420 1_3:+3733985 Msa0097890:intron
GTCACTTATTGAACTATCAT+CGG 0.561727 1_3:-3733131 None:intergenic
AAACTACAAAGATAGCTTTG+AGG 0.565331 1_3:+3736533 Msa0097890:CDS
TTTAATTCGAGTTTCCTACA+TGG 0.568254 1_3:+3732504 Msa0097890:CDS
AAGTCGCTTATTTCCTTGCG+TGG 0.570842 1_3:+3738144 Msa0097890:CDS
GTTATTAATAAATTAAGTGA+GGG 0.571192 1_3:+3733664 Msa0097890:CDS
TAGATCTTGCTGGCTCTGAA+AGG 0.571765 1_3:+3733563 Msa0097890:CDS
CTGAAAGATTCTGGAAGAGG+AGG 0.571957 1_3:-3735306 None:intergenic
TCCAGAATCTTTCAGCAATG+TGG 0.573414 1_3:+3735314 Msa0097890:CDS
AAGATACGAAAGCCTCGAAA+GGG 0.575290 1_3:+3737936 Msa0097890:CDS
CTACAAAGATAGCTTTGAGG+AGG 0.575855 1_3:+3736536 Msa0097890:CDS
ATGCACTGTAGCACCAGAAG+AGG 0.580036 1_3:+3733873 Msa0097890:CDS
ATTTCTCTTCACAAGATCCA+TGG 0.581284 1_3:+3730985 Msa0097890:CDS
ATGAAGGTGATTGAAAGCAA+AGG 0.582135 1_3:+3733091 Msa0097890:intron
CAATTGTGTTCAAGTGAATG+AGG 0.582429 1_3:+3734045 Msa0097890:CDS
CAATAACAGGAAATCAAAAG+AGG 0.585245 1_3:+3736852 Msa0097890:CDS
TGACCCGGGAGTGATTCCTC+GGG 0.588218 1_3:+3732338 Msa0097890:CDS
TAAACATTGAAGTACAGAGA+AGG 0.588298 1_3:+3738067 Msa0097890:CDS
TCGCTTGACAACAAAAGCAC+TGG 0.588807 1_3:-3735253 None:intergenic
AATGATTGAATATTTCGAGT+GGG 0.590847 1_3:-3735405 None:intergenic
GGTCTTAAGATCGCCACGCA+AGG 0.594095 1_3:-3738157 None:intergenic
TATGAGGTTATCAGAATCTG+TGG 0.594241 1_3:+3736509 Msa0097890:CDS
CTGTTGTTCAAACTTTGGAG+CGG 0.594910 1_3:-3730864 None:intergenic
GAGTAATTTGAAGAGAATCA+AGG 0.596477 1_3:-3735383 None:intergenic
TTCATTGTAAATCTCCATGT+AGG 0.597300 1_3:-3732518 None:intergenic
GATCTCCTTAAAGTAGGGGA+AGG 0.597889 1_3:+3732798 Msa0097890:CDS
CATTCAGGGATCTCATGCTG+GGG 0.601417 1_3:+3734598 Msa0097890:intron
GAATGGTTGTGAGACTGACC+CGG 0.603692 1_3:+3732323 Msa0097890:CDS
ATTCATGAGAGTCTGGAGGT+TGG 0.603780 1_3:+3732583 Msa0097890:CDS
AATATATCTTTGACTGCCCG+AGG 0.603820 1_3:-3732354 None:intergenic
AACGGAATCTGATTACTCAA+AGG 0.604986 1_3:+3737900 Msa0097890:CDS
ACAAAGGGCTCTGGTTTGGG+AGG 0.608213 1_3:+3737874 Msa0097890:intron
ACTCAGGAACGATTTACTCA+AGG 0.610689 1_3:+3734643 Msa0097890:CDS
GAATGATTGAATATTTCGAG+TGG 0.614233 1_3:-3735406 None:intergenic
AACTGCAAAGTATGAACGAG+AGG 0.615395 1_3:+3735951 Msa0097890:CDS
GGACCTAGATATTTGAGGCG+AGG 0.618934 1_3:+3735156 Msa0097890:CDS
TGAAAAGATAAATGAACTGG+AGG 0.620446 1_3:+3736008 Msa0097890:CDS
CGTCAATGGAAGCTTCTGGA+AGG 0.620460 1_3:+3730948 Msa0097890:CDS
GAAGAGAAATGCGGTTATCG+TGG 0.622023 1_3:-3730972 None:intergenic
GGTGATTGAAAGCAAAGGGA+AGG 0.625003 1_3:+3733096 Msa0097890:intron
TCTAGATCTCCTTAAAGTAG+GGG 0.634071 1_3:+3732794 Msa0097890:CDS
AAATGGAACTGGAAGAGGAG+AGG 0.635179 1_3:+3734793 Msa0097890:CDS
AGAGCTACGTAAGAAACTTG+AGG 0.645779 1_3:+3734513 Msa0097890:CDS
AATCCAGAGAAAGAATTCAG+AGG 0.645953 1_3:+3736410 Msa0097890:intron
AATGGTTGTGAGACTGACCC+GGG 0.646221 1_3:+3732324 Msa0097890:CDS
CTTATGGGCAGACAAGCAGT+GGG 0.647006 1_3:+3732286 Msa0097890:CDS
TTTGTGCAGCTGTCAACACA+AGG 0.651504 1_3:+3736880 Msa0097890:CDS
AATGAACAATGGCTACGTTG+CGG 0.653712 1_3:+3735359 Msa0097890:CDS
GCAAATTCATGAGAGTCTGG+AGG 0.662554 1_3:+3732579 Msa0097890:CDS
ATGTGGCTGACGAAGATATG+TGG 0.664341 1_3:+3735331 Msa0097890:CDS
GCACTGGCTGTCTTTAAACA+GGG 0.667039 1_3:-3735237 None:intergenic
ATTTAGTATGAAATGGAGCG+TGG 0.667727 1_3:+3734762 Msa0097890:intron
TTGTGTTGACAGCTGCACAA+AGG 0.687059 1_3:-3736878 None:intergenic
ATGTGGTTGAAAATGAACAA+TGG 0.705354 1_3:+3735348 Msa0097890:CDS
AAATTGAATACCGAAAGCAT+AGG 0.705637 1_3:-3731028 None:intergenic
ACGGAATCTGAAGAAACGAG+AGG 0.707109 1_3:-3730928 None:intergenic
ATTTGTTGCAGGGCTCAGAG+AGG 0.717309 1_3:+3732746 Msa0097890:CDS
GATTGCAGCATAGTTCCCAG+TGG 0.731076 1_3:-3736759 None:intergenic
ATCTGAGACTGAGAATGATG+TGG 0.732067 1_3:-3734871 None:intergenic
GGATCTTGTGAAGAGAAATG+CGG 0.734672 1_3:-3730981 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATAAGATAGAATTT+AGG - chr1_3:3731082-3731101 None:intergenic 10.0%
!!! GTTTTTAATTAATTTCATTT+CGG + chr1_3:3731247-3731266 Msa0097890:intron 10.0%
!!! CTTTATTTCTATTTTTTAAA+AGG + chr1_3:3735462-3735481 Msa0097890:intron 10.0%
!! AAAACAATTTGAATTGAATT+TGG - chr1_3:3731232-3731251 None:intergenic 15.0%
!!! TACTAAATTCAATTTTTCAT+GGG - chr1_3:3731399-3731418 None:intergenic 15.0%
!!! TTACTAAATTCAATTTTTCA+TGG - chr1_3:3731400-3731419 None:intergenic 15.0%
!! TAGTAAGTTGTTAAAATATA+TGG + chr1_3:3731829-3731848 Msa0097890:intron 15.0%
!! ATGACAATAATTATATGATA+TGG + chr1_3:3732247-3732266 Msa0097890:intron 15.0%
!!! TATATTTTCAAAAATTGAGA+CGG + chr1_3:3732371-3732390 Msa0097890:CDS 15.0%
!!! TTTTATTATTTATTTTCCAG+CGG + chr1_3:3732718-3732737 Msa0097890:intron 15.0%
!!! TTTTTATATTGAAAGGAATA+TGG - chr1_3:3733199-3733218 None:intergenic 15.0%
!! TTAAAGAAAAAATAATCCTT+TGG + chr1_3:3733348-3733367 Msa0097890:intron 15.0%
!! ATATAATATAGTTGAATTTG+TGG + chr1_3:3733527-3733546 Msa0097890:intron 15.0%
!! TGTTATTAATAAATTAAGTG+AGG + chr1_3:3733663-3733682 Msa0097890:CDS 15.0%
!! GTTATTAATAAATTAAGTGA+GGG + chr1_3:3733664-3733683 Msa0097890:CDS 15.0%
!! CTAAATGATTTGAAAATTAT+TGG - chr1_3:3733966-3733985 None:intergenic 15.0%
!!! CAATAATTTTCAAATCATTT+AGG + chr1_3:3733964-3733983 Msa0097890:intron 15.0%
!! AGCAAAAAGAATATTAAAAA+GGG - chr1_3:3734103-3734122 None:intergenic 15.0%
!! TAAGAATACAAGATATAAAA+GGG + chr1_3:3735589-3735608 Msa0097890:intron 15.0%
!!! TTATAGTTTCTTTTTTGATT+TGG + chr1_3:3735900-3735919 Msa0097890:intron 15.0%
!! AAATTAGAAAAATTAGAAGA+GGG - chr1_3:3736147-3736166 None:intergenic 15.0%
!!! TTTTGTATAATTTAAAGTGA+AGG - chr1_3:3737174-3737193 None:intergenic 15.0%
!!! GAATTTAGTAAAGATACTTT+TGG + chr1_3:3731409-3731428 Msa0097890:intron 20.0%
!!! TTTGAAATATTCATAATCTG+AGG + chr1_3:3731917-3731936 Msa0097890:intron 20.0%
!! TTGAAATATTCATAATCTGA+GGG + chr1_3:3731918-3731937 Msa0097890:intron 20.0%
!! AATAATTATATGATATGGTC+AGG + chr1_3:3732252-3732271 Msa0097890:intron 20.0%
!! ATAATTATATGATATGGTCA+GGG + chr1_3:3732253-3732272 Msa0097890:intron 20.0%
!!! TTTTTTAACTTTGATGATGA+AGG + chr1_3:3732406-3732425 Msa0097890:intron 20.0%
!!! TTTATTATTTATTTTCCAGC+GGG + chr1_3:3732719-3732738 Msa0097890:intron 20.0%
!! ATCACATACAATATTTAGAA+TGG + chr1_3:3732966-3732985 Msa0097890:CDS 20.0%
!!! TGATTAAAAAGCATTAGATT+AGG - chr1_3:3733068-3733087 None:intergenic 20.0%
!!! TGCTTTTTAATCAAATATGA+AGG + chr1_3:3733075-3733094 Msa0097890:intron 20.0%
!! AATAGTTGATTAGGATAATT+TGG - chr1_3:3733315-3733334 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG + chr1_3:3733314-3733333 Msa0097890:intron 20.0%
!! AAATAAACCAATAGTTGATT+AGG - chr1_3:3733324-3733343 None:intergenic 20.0%
!! GTAACATAGTATTAATTGAA+TGG + chr1_3:3733378-3733397 Msa0097890:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr1_3:3733412-3733431 Msa0097890:intron 20.0%
!!! AAATAGGTATGTTTTTTTGT+TGG + chr1_3:3733693-3733712 Msa0097890:intron 20.0%
!!! ACTTTGGAAAATAATAATGT+TGG + chr1_3:3733748-3733767 Msa0097890:intron 20.0%
!! TTAATTTACTATCACGATAT+GGG - chr1_3:3733804-3733823 None:intergenic 20.0%
!! GAGCAAAAAGAATATTAAAA+AGG - chr1_3:3734104-3734123 None:intergenic 20.0%
!!! AGAAAGTATTTAACATTTAC+AGG - chr1_3:3734948-3734967 None:intergenic 20.0%
!!! ACTTTCTAATTCTAAAACAA+TGG + chr1_3:3734961-3734980 Msa0097890:intron 20.0%
!! AAATAAAGATATGAACTTAC+AGG - chr1_3:3735450-3735469 None:intergenic 20.0%
!! ATATCTTGTATTCTTAGTTA+TGG - chr1_3:3735585-3735604 None:intergenic 20.0%
!! CTAAGAATACAAGATATAAA+AGG + chr1_3:3735588-3735607 Msa0097890:intron 20.0%
!! AAATTCATAAACCAATTGAA+GGG - chr1_3:3735646-3735665 None:intergenic 20.0%
!! AAAATTCATAAACCAATTGA+AGG - chr1_3:3735647-3735666 None:intergenic 20.0%
!! TCTATATACATAATCATCTT+CGG - chr1_3:3735747-3735766 None:intergenic 20.0%
!! AAATGAAAAGATAAATGAAC+TGG + chr1_3:3736005-3736024 Msa0097890:CDS 20.0%
!! ATATACTATCATTCATACTT+TGG + chr1_3:3736041-3736060 Msa0097890:intron 20.0%
!! CAAATTAGAAAAATTAGAAG+AGG - chr1_3:3736148-3736167 None:intergenic 20.0%
!!! CTCTTCTAATTTTTCTAATT+TGG + chr1_3:3736146-3736165 Msa0097890:intron 20.0%
!! GAATAATTTAATTACATCAC+TGG + chr1_3:3736814-3736833 Msa0097890:CDS 20.0%
!!! CTATTCTTTGTCTTATTTTT+AGG + chr1_3:3736950-3736969 Msa0097890:intron 20.0%
!! TTCAACTTTACTTGAAAAAA+TGG + chr1_3:3737273-3737292 Msa0097890:intron 20.0%
!!! TTTTAAGACAAAACATAGTA+AGG + chr1_3:3737818-3737837 Msa0097890:intron 20.0%
!! TTGTAACAAAAAATCAGTTT+AGG - chr1_3:3737858-3737877 None:intergenic 20.0%
!!! AAACTGATTTTTTGTTACAA+AGG + chr1_3:3737858-3737877 Msa0097890:intron 20.0%
!!! AACTGATTTTTTGTTACAAA+GGG + chr1_3:3737859-3737878 Msa0097890:intron 20.0%
!! TACTATACTCTTTTTCTTAG+CGG - chr1_3:3730822-3730841 None:intergenic 25.0%
! GAAAAAGAAAACAAAATCGA+AGG - chr1_3:3731107-3731126 None:intergenic 25.0%
! AAAGTAAGAGACGAATTTAA+TGG - chr1_3:3731661-3731680 None:intergenic 25.0%
! ATTAAATTCGTCTCTTACTT+TGG + chr1_3:3731660-3731679 Msa0097890:intron 25.0%
! CAATATGTTAGGGATTAAAT+TGG + chr1_3:3731774-3731793 Msa0097890:intron 25.0%
! TTTAACCACTAACTTCAATA+AGG - chr1_3:3731856-3731875 None:intergenic 25.0%
! TGAAGTTAGTGGTTAAATAT+AGG + chr1_3:3731859-3731878 Msa0097890:intron 25.0%
! GAAGTTAGTGGTTAAATATA+GGG + chr1_3:3731860-3731879 Msa0097890:intron 25.0%
! TTGACAGTTTAATAGATTCA+AGG + chr1_3:3731889-3731908 Msa0097890:intron 25.0%
!! ATGTTAGAGACTTTTACTTT+AGG + chr1_3:3732057-3732076 Msa0097890:intron 25.0%
! TGCATGCATTTATTACTTAA+GGG + chr1_3:3732097-3732116 Msa0097890:intron 25.0%
! ATTTATTACTTAAGGGAATC+AGG + chr1_3:3732104-3732123 Msa0097890:intron 25.0%
! TAAAACACACACATATATCA+TGG - chr1_3:3732132-3732151 None:intergenic 25.0%
! ACCGTTATATTAATTGTGTT+AGG + chr1_3:3732166-3732185 Msa0097890:intron 25.0%
! CCCTAACACAATTAATATAA+CGG - chr1_3:3732170-3732189 None:intergenic 25.0%
! CCGTTATATTAATTGTGTTA+GGG + chr1_3:3732167-3732186 Msa0097890:intron 25.0%
!! TTTTCTTTTGTGGTTAATGT+TGG + chr1_3:3732628-3732647 Msa0097890:CDS 25.0%
!!! TTATTATTTATTTTCCAGCG+GGG + chr1_3:3732720-3732739 Msa0097890:intron 25.0%
! TATATTGAAAGGAATATGGA+AGG - chr1_3:3733195-3733214 None:intergenic 25.0%
!! ACATGTTTCATTTTATGGTA+GGG + chr1_3:3733771-3733790 Msa0097890:intron 25.0%
! GTTAATTTACTATCACGATA+TGG - chr1_3:3733805-3733824 None:intergenic 25.0%
! ACAATTTGGGAAAATCAAAT+GGG - chr1_3:3734157-3734176 None:intergenic 25.0%
! AACAATTTGGGAAAATCAAA+TGG - chr1_3:3734158-3734177 None:intergenic 25.0%
! TGTGTAACTAAACTATCTAT+TGG + chr1_3:3734213-3734232 Msa0097890:intron 25.0%
! AGAATTAGGATAATCGTATT+AGG + chr1_3:3734252-3734271 Msa0097890:intron 25.0%
! GCAAAAACAAGTAAAATGTA+GGG - chr1_3:3734320-3734339 None:intergenic 25.0%
! TATAGCTGGTATAAAATTGA+AGG - chr1_3:3734378-3734397 None:intergenic 25.0%
!! CTTACTTATTTCTTGATTGT+TGG + chr1_3:3734433-3734452 Msa0097890:intron 25.0%
!! TACATGAATATTTTCCATTC+AGG + chr1_3:3734583-3734602 Msa0097890:intron 25.0%
!! ACATGAATATTTTCCATTCA+GGG + chr1_3:3734584-3734603 Msa0097890:intron 25.0%
! TTCCACTATTTAGTATGAAA+TGG + chr1_3:3734755-3734774 Msa0097890:intron 25.0%
! AATTATGCTCATGTATGTTA+GGG + chr1_3:3735135-3735154 Msa0097890:intron 25.0%
!! AATGATTGAATATTTCGAGT+GGG - chr1_3:3735408-3735427 None:intergenic 25.0%
!! CTGTATATATTGCTATTATG+GGG - chr1_3:3735548-3735567 None:intergenic 25.0%
!! GCTGTATATATTGCTATTAT+GGG - chr1_3:3735549-3735568 None:intergenic 25.0%
!! TGCTGTATATATTGCTATTA+TGG - chr1_3:3735550-3735569 None:intergenic 25.0%
!!! TTCGCTTTTAAACAAAAACA+TGG - chr1_3:3735797-3735816 None:intergenic 25.0%
! TACACATAAAAAGAGAAACA+TGG - chr1_3:3735867-3735886 None:intergenic 25.0%
!! ACAATAAATTGACTGTTTCT+TGG - chr1_3:3736622-3736641 None:intergenic 25.0%
! GATTGATATCTTGATATTTG+TGG - chr1_3:3736917-3736936 None:intergenic 25.0%
! AAGATATCAATCATCAATCA+TGG + chr1_3:3736925-3736944 Msa0097890:intron 25.0%
! TAGTTACTATGTGGTATTAA+TGG - chr1_3:3737007-3737026 None:intergenic 25.0%
!! TTTAAAGTGAAGGTAATACA+AGG - chr1_3:3737164-3737183 None:intergenic 25.0%
! CAAAAGCTTGAATCATATTA+TGG + chr1_3:3737189-3737208 Msa0097890:intron 25.0%
!! TATCATTCCCTTAATTTGAA+GGG - chr1_3:3737253-3737272 None:intergenic 25.0%
!! ATATCATTCCCTTAATTTGA+AGG - chr1_3:3737254-3737273 None:intergenic 25.0%
! TTTCTGTTAGATAGGAAATT+AGG + chr1_3:3737371-3737390 Msa0097890:intron 25.0%
! AAATTAGGAACAAACAATCA+GGG + chr1_3:3737386-3737405 Msa0097890:intron 25.0%
!!! AACTTTTTTATCTTGCCTTT+TGG - chr1_3:3737682-3737701 None:intergenic 25.0%
!! CATATAAATTAGAAGTGTGT+AGG + chr1_3:3737703-3737722 Msa0097890:intron 25.0%
!! CAATTCTATCTTTTTACCTA+TGG - chr1_3:3737784-3737803 None:intergenic 25.0%
! TTAAGACCAAAATTGAGAAA+TGG + chr1_3:3738172-3738191 Msa0097890:CDS 25.0%
TTTGAATTTCGAGAGATTGA+CGG - chr1_3:3730797-3730816 None:intergenic 30.0%
! CTTTTCTGTTGTTCAAACTT+TGG - chr1_3:3730872-3730891 None:intergenic 30.0%
TTGAACAACAGAAAAGCAAA+TGG + chr1_3:3730876-3730895 Msa0097890:exon 30.0%
! AAATTGAATACCGAAAGCAT+AGG - chr1_3:3731031-3731050 None:intergenic 30.0%
TGTTTATGAGATTCTCACTA+AGG + chr1_3:3731169-3731188 Msa0097890:CDS 30.0%
! TTGGTGATAAATGATGAACT+TGG + chr1_3:3731428-3731447 Msa0097890:intron 30.0%
!! TTTGACAGTTTTTCAACTAC+TGG + chr1_3:3731495-3731514 Msa0097890:intron 30.0%
GTCAAATGATGTATGGAATT+GGG + chr1_3:3731561-3731580 Msa0097890:intron 30.0%
CTTCTTCTGACAATATGTTA+GGG + chr1_3:3731764-3731783 Msa0097890:intron 30.0%
AATCTATTAAACTGTCAAGC+TGG - chr1_3:3731887-3731906 None:intergenic 30.0%
CTGCATGCATTTATTACTTA+AGG + chr1_3:3732096-3732115 Msa0097890:intron 30.0%
CCAAATCTAAATCAAAGCAA+CGG - chr1_3:3732202-3732221 None:intergenic 30.0%
! TTTAATTCGAGTTTCCTACA+TGG + chr1_3:3732504-3732523 Msa0097890:CDS 30.0%
TTCATTGTAAATCTCCATGT+AGG - chr1_3:3732521-3732540 None:intergenic 30.0%
! TCTGATTTTCAACAACAAGA+AGG - chr1_3:3732555-3732574 None:intergenic 30.0%
!!! TCACTTTGCTTTTTCTTTTG+TGG + chr1_3:3732618-3732637 Msa0097890:CDS 30.0%
TTCTAGATCTCCTTAAAGTA+GGG + chr1_3:3732793-3732812 Msa0097890:CDS 30.0%
!! GTTATTGTTTTACAGTGAAC+AGG + chr1_3:3732905-3732924 Msa0097890:intron 30.0%
GTGAGACAAATATGAATGTA+AGG + chr1_3:3732935-3732954 Msa0097890:CDS 30.0%
GTCACTTATTGAACTATCAT+CGG - chr1_3:3733134-3733153 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_3:3733478-3733497 None:intergenic 30.0%
TAGAATTTAGTAGATCTTGC+TGG + chr1_3:3733553-3733572 Msa0097890:intron 30.0%
! AACAAAAGCTTGATGATTCT+AGG + chr1_3:3733637-3733656 Msa0097890:CDS 30.0%
! GTTGGACATGTTTCATTTTA+TGG + chr1_3:3733766-3733785 Msa0097890:intron 30.0%
! GACATGTTTCATTTTATGGT+AGG + chr1_3:3733770-3733789 Msa0097890:intron 30.0%
! CATGTTTCATTTTATGGTAG+GGG + chr1_3:3733772-3733791 Msa0097890:intron 30.0%
!!! AGTGCATATAATGGATGTTT+TGG - chr1_3:3733860-3733879 None:intergenic 30.0%
!! TTGTGTCTCTTTAACTTGTT+TGG + chr1_3:3733916-3733935 Msa0097890:intron 30.0%
GTTCACATTGAAGAAACAAA+GGG + chr1_3:3733986-3734005 Msa0097890:CDS 30.0%
! TAAGCACTGCTAAACATAAA+TGG - chr1_3:3734126-3734145 None:intergenic 30.0%
CAATTTGGGAAAATCAAATG+GGG - chr1_3:3734156-3734175 None:intergenic 30.0%
CTGATACTAGGAAACAATTT+GGG - chr1_3:3734170-3734189 None:intergenic 30.0%
ACTGATACTAGGAAACAATT+TGG - chr1_3:3734171-3734190 None:intergenic 30.0%
CAAGTAAATCAACTGATACT+AGG - chr1_3:3734182-3734201 None:intergenic 30.0%
AAGAAAATCGTGGAAGAATT+AGG + chr1_3:3734238-3734257 Msa0097890:intron 30.0%
TAAAATGTAGGGAAAACTTC+AGG - chr1_3:3734309-3734328 None:intergenic 30.0%
GGCAAAAACAAGTAAAATGT+AGG - chr1_3:3734321-3734340 None:intergenic 30.0%
!!! ACATTTTACTTGTTTTTGCC+TGG + chr1_3:3734321-3734340 Msa0097890:intron 30.0%
CAAATACAGGAAAACTATCT+AGG - chr1_3:3734403-3734422 None:intergenic 30.0%
! GTTTTCCTGTATTTGCATTT+TGG + chr1_3:3734408-3734427 Msa0097890:intron 30.0%
AAGTACCAAAATGCAAATAC+AGG - chr1_3:3734416-3734435 None:intergenic 30.0%
CTCCATTTCATACTAAATAG+TGG - chr1_3:3734760-3734779 None:intergenic 30.0%
!! CGCAACTTTGTTATTTATCA+TGG + chr1_3:3734992-3735011 Msa0097890:intron 30.0%
! AAGGAAAAGTATGAATTGTC+TGG - chr1_3:3735032-3735051 None:intergenic 30.0%
TGAGCATAATTGGAACAAAA+TGG - chr1_3:3735126-3735145 None:intergenic 30.0%
CTAACATACATGAGCATAAT+TGG - chr1_3:3735136-3735155 None:intergenic 30.0%
CAATTATGCTCATGTATGTT+AGG + chr1_3:3735134-3735153 Msa0097890:intron 30.0%
GACATTAATAGTACATCTCA+AGG + chr1_3:3735198-3735217 Msa0097890:CDS 30.0%
ATGTGGTTGAAAATGAACAA+TGG + chr1_3:3735348-3735367 Msa0097890:CDS 30.0%
GAGTAATTTGAAGAGAATCA+AGG - chr1_3:3735386-3735405 None:intergenic 30.0%
GAATGATTGAATATTTCGAG+TGG - chr1_3:3735409-3735428 None:intergenic 30.0%
!!! GAAGTTTTTTTCCCTTCAAT+TGG + chr1_3:3735632-3735651 Msa0097890:intron 30.0%
TATTGTTGAGCAATTCTTGT+TGG + chr1_3:3735680-3735699 Msa0097890:intron 30.0%
GTATTTAATATAGCACTGTG+TGG + chr1_3:3735817-3735836 Msa0097890:intron 30.0%
TGAAAAGATAAATGAACTGG+AGG + chr1_3:3736008-3736027 Msa0097890:CDS 30.0%
GCTTACTAACAATTTCATAC+AGG - chr1_3:3736083-3736102 None:intergenic 30.0%
!! ACGAAACTGTTTAACTTGAT+AGG + chr1_3:3736117-3736136 Msa0097890:intron 30.0%
TCTATATCAGCTACATCAAA+TGG - chr1_3:3736190-3736209 None:intergenic 30.0%
! CTTCGCTCTCTTTTATAAAA+TGG + chr1_3:3736352-3736371 Msa0097890:intron 30.0%
ATAGGCAATTCTTGAATTAG+CGG - chr1_3:3736492-3736511 None:intergenic 30.0%
TAATTCAAGAATTGCCTATG+AGG + chr1_3:3736493-3736512 Msa0097890:CDS 30.0%
! AAACTACAAAGATAGCTTTG+AGG + chr1_3:3736533-3736552 Msa0097890:CDS 30.0%
TATGGCAAATAAAGCTGATA+TGG - chr1_3:3736593-3736612 None:intergenic 30.0%
! ACTGTTTCTTGGAATGATTA+TGG - chr1_3:3736611-3736630 None:intergenic 30.0%
TTATCAGAAAGCTCAATAAC+AGG + chr1_3:3736839-3736858 Msa0097890:CDS 30.0%
CAATAACAGGAAATCAAAAG+AGG + chr1_3:3736852-3736871 Msa0097890:CDS 30.0%
ATAGTAACTAAAGCCTTGAT+TGG + chr1_3:3737017-3737036 Msa0097890:intron 30.0%
TATTGAACAAATGCCAATCA+AGG - chr1_3:3737033-3737052 None:intergenic 30.0%
!! TTAATTTGAAGGGTGCTATA+AGG - chr1_3:3737243-3737262 None:intergenic 30.0%
TTATAGCACCCTTCAAATTA+AGG + chr1_3:3737242-3737261 Msa0097890:intron 30.0%
TATAGCACCCTTCAAATTAA+GGG + chr1_3:3737243-3737262 Msa0097890:intron 30.0%
ACTTGAAAAAATGGTTAGAG+AGG + chr1_3:3737282-3737301 Msa0097890:intron 30.0%
ACATTCACTCATTTCACTTT+GGG - chr1_3:3737335-3737354 None:intergenic 30.0%
AAAGTGAAATGAGTGAATGT+GGG + chr1_3:3737335-3737354 Msa0097890:intron 30.0%
TTGAGGAATTTCTGTTAGAT+AGG + chr1_3:3737363-3737382 Msa0097890:intron 30.0%
GAAATTAGGAACAAACAATC+AGG + chr1_3:3737385-3737404 Msa0097890:intron 30.0%
!! ATACTGATTTAGAGACCAAA+AGG + chr1_3:3737664-3737683 Msa0097890:intron 30.0%
TAAACATTGAAGTACAGAGA+AGG + chr1_3:3738067-3738086 Msa0097890:CDS 30.0%
AGAGAAGGAAAAATCTAGAA+GGG + chr1_3:3738082-3738101 Msa0097890:CDS 30.0%
!! AAAGATTTTGGCACTGAAAT+TGG - chr1_3:3738210-3738229 None:intergenic 30.0%
! ATTTCAGTGCCAAAATCTTT+TGG + chr1_3:3738210-3738229 Msa0097890:CDS 30.0%
! TTTCAGTGCCAAAATCTTTT+GGG + chr1_3:3738211-3738230 Msa0097890:CDS 30.0%
ATTGTAAACCATGAACATCT+TGG + chr1_3:3738250-3738269 Msa0097890:three_prime_UTR 30.0%
! CGGATATTTTCTGTTCTTCA+TGG - chr1_3:3730757-3730776 None:intergenic 35.0%
AGAAAATATCCGTTTGTCGA+AGG + chr1_3:3730765-3730784 Msa0097890:five_prime_UTR 35.0%
GAAAATATCCGTTTGTCGAA+GGG + chr1_3:3730766-3730785 Msa0097890:five_prime_UTR 35.0%
ATTTCTCTTCACAAGATCCA+TGG + chr1_3:3730985-3731004 Msa0097890:CDS 35.0%
TCTAACTCTTCCTATGCTTT+CGG + chr1_3:3731018-3731037 Msa0097890:CDS 35.0%
!!! TTCTCTCTTGTTTTTGCAGT+CGG + chr1_3:3731452-3731471 Msa0097890:intron 35.0%
AATCCTCTCATTTATGCTGT+CGG - chr1_3:3731534-3731553 None:intergenic 35.0%
GGTCAAATGATGTATGGAAT+TGG + chr1_3:3731560-3731579 Msa0097890:intron 35.0%
ACTACAATTTGATAGAGTCG+AGG - chr1_3:3731734-3731753 None:intergenic 35.0%
CCTAACATATTGTCAGAAGA+AGG - chr1_3:3731766-3731785 None:intergenic 35.0%
CCTTCTTCTGACAATATGTT+AGG + chr1_3:3731763-3731782 Msa0097890:intron 35.0%
! GGGATTAAATTGGTAGTAAG+TGG + chr1_3:3731784-3731803 Msa0097890:intron 35.0%
ATGGACCTTATTGAAGTTAG+TGG + chr1_3:3731848-3731867 Msa0097890:intron 35.0%
ATAATCTGAGGGACCTATTT+GGG + chr1_3:3731929-3731948 Msa0097890:intron 35.0%
AACAAAGTCAGAGACTAAGT+TGG + chr1_3:3731958-3731977 Msa0097890:intron 35.0%
!! AAGTTGGTGGTTTACTTGAT+TGG + chr1_3:3731974-3731993 Msa0097890:intron 35.0%
!! AGTTGGTGGTTTACTTGATT+GGG + chr1_3:3731975-3731994 Msa0097890:intron 35.0%
! CCGTTGCTTTGATTTAGATT+TGG + chr1_3:3732199-3732218 Msa0097890:intron 35.0%
ATCTGAGAAACAAACAAGCA+AGG - chr1_3:3732469-3732488 None:intergenic 35.0%
ATTGCAAATTCATGAGAGTC+TGG + chr1_3:3732576-3732595 Msa0097890:CDS 35.0%
! GTTCTAGATCTCCTTAAAGT+AGG + chr1_3:3732792-3732811 Msa0097890:CDS 35.0%
TCTAGATCTCCTTAAAGTAG+GGG + chr1_3:3732794-3732813 Msa0097890:CDS 35.0%
ATGAAGGTGATTGAAAGCAA+AGG + chr1_3:3733091-3733110 Msa0097890:intron 35.0%
TGAAGGTGATTGAAAGCAAA+GGG + chr1_3:3733092-3733111 Msa0097890:intron 35.0%
TGAACTATCATCGGAAGAAT+CGG - chr1_3:3733125-3733144 None:intergenic 35.0%
TTCCTTGATATGTGTGCAAT+TGG - chr1_3:3733261-3733280 None:intergenic 35.0%
ATTGCACACATATCAAGGAA+TGG + chr1_3:3733261-3733280 Msa0097890:intron 35.0%
CTATGTTACACTACTTCCAA+AGG - chr1_3:3733367-3733386 None:intergenic 35.0%
!!! GACACTCATTTTGAAACAGA+GGG + chr1_3:3733482-3733501 Msa0097890:intron 35.0%
TAAGTGAGGGCTCAAAAAAT+AGG + chr1_3:3733677-3733696 Msa0097890:CDS 35.0%
GGTTCACATTGAAGAAACAA+AGG + chr1_3:3733985-3734004 Msa0097890:intron 35.0%
CTCATTCACTTGAACACAAT+TGG - chr1_3:3734047-3734066 None:intergenic 35.0%
CAATTGTGTTCAAGTGAATG+AGG + chr1_3:3734045-3734064 Msa0097890:CDS 35.0%
TCTATTGGAGAAGAAAATCG+TGG + chr1_3:3734228-3734247 Msa0097890:intron 35.0%
ATCGTATTAGGAAGCTTACT+CGG + chr1_3:3734264-3734283 Msa0097890:intron 35.0%
AACCTATGCTAACTATTTCC+AGG - chr1_3:3734342-3734361 None:intergenic 35.0%
AAACTATCTAGGCATATAGC+TGG - chr1_3:3734392-3734411 None:intergenic 35.0%
ATTTAGTATGAAATGGAGCG+TGG + chr1_3:3734762-3734781 Msa0097890:intron 35.0%
AGAGGAAATCACGTAATCAA+TGG + chr1_3:3734811-3734830 Msa0097890:CDS 35.0%
! GAAAAGTATGAATTGTCTGG+AGG - chr1_3:3735029-3735048 None:intergenic 35.0%
CAAAATGGAGCAAAAATGTC+AGG - chr1_3:3735111-3735130 None:intergenic 35.0%
AACTTCATCAACGATGTCAA+CGG - chr1_3:3735618-3735637 None:intergenic 35.0%
CAAGAATTGCTCAACAATAG+AGG - chr1_3:3735679-3735698 None:intergenic 35.0%
! AGTTTCGTTTGATGATCTTC+TGG - chr1_3:3736105-3736124 None:intergenic 35.0%
AATACACATCAACAGAGTCA+TGG - chr1_3:3736390-3736409 None:intergenic 35.0%
AATCCAGAGAAAGAATTCAG+AGG + chr1_3:3736410-3736429 Msa0097890:intron 35.0%
CCTATTAGTTGCTTGTTTGA+CGG - chr1_3:3736441-3736460 None:intergenic 35.0%
ACAGATTCTGATAACCTCAT+AGG - chr1_3:3736510-3736529 None:intergenic 35.0%
TATGAGGTTATCAGAATCTG+TGG + chr1_3:3736509-3736528 Msa0097890:CDS 35.0%
! TATCAGTAATGCAGGTTGAA+TGG + chr1_3:3736562-3736581 Msa0097890:intron 35.0%
! ATCAGTAATGCAGGTTGAAT+GGG + chr1_3:3736563-3736582 Msa0097890:intron 35.0%
TCCTAAACAGAGATTTGCAT+TGG + chr1_3:3736652-3736671 Msa0097890:intron 35.0%
TCCAATGCAAATCTCTGTTT+AGG - chr1_3:3736656-3736675 None:intergenic 35.0%
AAACAGAGATTTGCATTGGA+TGG + chr1_3:3736656-3736675 Msa0097890:intron 35.0%
CTTTCAACCATGAGTGAAAT+TGG + chr1_3:3736701-3736720 Msa0097890:CDS 35.0%
ATTTGCACCAATTTCACTCA+TGG - chr1_3:3736711-3736730 None:intergenic 35.0%
TGCAAATCTATTTGCAGCTT+TGG + chr1_3:3736724-3736743 Msa0097890:CDS 35.0%
!! AATCTATTTGCAGCTTTGGA+AGG + chr1_3:3736728-3736747 Msa0097890:CDS 35.0%
AATCCAGGAACAACAAAAAG+AGG + chr1_3:3736778-3736797 Msa0097890:CDS 35.0%
! TCAAGGCTTTAGTTACTATG+TGG - chr1_3:3737016-3737035 None:intergenic 35.0%
ATTCACTCATTTCACTTTGG+GGG - chr1_3:3737333-3737352 None:intergenic 35.0%
CATTCACTCATTTCACTTTG+GGG - chr1_3:3737334-3737353 None:intergenic 35.0%
CACATTCACTCATTTCACTT+TGG - chr1_3:3737336-3737355 None:intergenic 35.0%
CAAAGTGAAATGAGTGAATG+TGG + chr1_3:3737334-3737353 Msa0097890:intron 35.0%
AAGTGAAATGAGTGAATGTG+GGG + chr1_3:3737336-3737355 Msa0097890:intron 35.0%
TCGTTAAATAGTGTCTACAG+CGG + chr1_3:3737513-3737532 Msa0097890:intron 35.0%
TTGTCAAATAGCAGCTATAG+TGG + chr1_3:3737576-3737595 Msa0097890:intron 35.0%
!!! TTTTTTGTTACAAAGGGCTC+TGG + chr1_3:3737865-3737884 Msa0097890:intron 35.0%
AACGGAATCTGATTACTCAA+AGG + chr1_3:3737900-3737919 Msa0097890:CDS 35.0%
!! CTTTCAAAGCATTTTCCCTT+TGG - chr1_3:3738044-3738063 None:intergenic 35.0%
CAGAGAAGGAAAAATCTAGA+AGG + chr1_3:3738081-3738100 Msa0097890:CDS 35.0%
GAGAAGGAAAAATCTAGAAG+GGG + chr1_3:3738083-3738102 Msa0097890:CDS 35.0%
! AGCTCTCCATTTCTCAATTT+TGG - chr1_3:3738181-3738200 None:intergenic 35.0%
! TCTTGACACCCAAAAGATTT+TGG - chr1_3:3738222-3738241 None:intergenic 35.0%
AAAAGACACCAAGATGTTCA+TGG - chr1_3:3738261-3738280 None:intergenic 35.0%
CATGGACTTTCATGGCATAT+GGG - chr1_3:3730739-3730758 None:intergenic 40.0%
TCATGGACTTTCATGGCATA+TGG - chr1_3:3730740-3730759 None:intergenic 40.0%
CTGTTCTTCATGGACTTTCA+TGG - chr1_3:3730747-3730766 None:intergenic 40.0%
!! TGTTGTTCAAACTTTGGAGC+GGG - chr1_3:3730866-3730885 None:intergenic 40.0%
! CTGTTGTTCAAACTTTGGAG+CGG - chr1_3:3730867-3730886 None:intergenic 40.0%
GTTTCTTCAGATTCCGTCAA+TGG + chr1_3:3730934-3730953 Msa0097890:CDS 40.0%
GGATCTTGTGAAGAGAAATG+CGG - chr1_3:3730984-3731003 None:intergenic 40.0%
!! TTGCAGTCGGTTCTAAATTG+AGG + chr1_3:3731465-3731484 Msa0097890:intron 40.0%
!! AGTCGGTTCTAAATTGAGGT+CGG + chr1_3:3731469-3731488 Msa0097890:intron 40.0%
!! TCAACTACTGGCCTCAATTT+TGG + chr1_3:3731507-3731526 Msa0097890:intron 40.0%
ATAAATGAGAGGATTCGAGC+TGG + chr1_3:3731539-3731558 Msa0097890:intron 40.0%
!! TCTCCGTCATTGACTTAGAT+GGG - chr1_3:3731629-3731648 None:intergenic 40.0%
!! ATCTCCGTCATTGACTTAGA+TGG - chr1_3:3731630-3731649 None:intergenic 40.0%
!! TTTGGAGAGCACTCTCAAAT+AGG + chr1_3:3731678-3731697 Msa0097890:intron 40.0%
CATAATCTGAGGGACCTATT+TGG + chr1_3:3731928-3731947 Msa0097890:intron 40.0%
! AAAGTCAGAGACTAAGTTGG+TGG + chr1_3:3731961-3731980 Msa0097890:intron 40.0%
AATATATCTTTGACTGCCCG+AGG - chr1_3:3732357-3732376 None:intergenic 40.0%
ACAAACCTTCCCCTACTTTA+AGG - chr1_3:3732806-3732825 None:intergenic 40.0%
TTTACAGTGAACAGGCACTT+TGG + chr1_3:3732913-3732932 Msa0097890:intron 40.0%
! CATTGTTCGAGTTTCAGTCT+TGG + chr1_3:3733153-3733172 Msa0097890:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_3:3733231-3733250 None:intergenic 40.0%
AGCCAATTGCACACATATCA+AGG + chr1_3:3733256-3733275 Msa0097890:intron 40.0%
!!! CGACACTCATTTTGAAACAG+AGG + chr1_3:3733481-3733500 Msa0097890:intron 40.0%
TCTGAAAGGATTGCAAAGAC+TGG + chr1_3:3733577-3733596 Msa0097890:CDS 40.0%
GATGGAGTACGTTTGAAAGA+AGG + chr1_3:3733604-3733623 Msa0097890:CDS 40.0%
!! TGGTGCTACAGTGCATATAA+TGG - chr1_3:3733869-3733888 None:intergenic 40.0%
!! AACACAATTGGTGATGCGTT+TGG - chr1_3:3734035-3734054 None:intergenic 40.0%
TCGTATTAGGAAGCTTACTC+GGG + chr1_3:3734265-3734284 Msa0097890:intron 40.0%
TGCCTGGAAATAGTTAGCAT+AGG + chr1_3:3734337-3734356 Msa0097890:intron 40.0%
AGAGCTACGTAAGAAACTTG+AGG + chr1_3:3734513-3734532 Msa0097890:CDS 40.0%
AGCAAGAGGTTCTTAAACTC+AGG + chr1_3:3734627-3734646 Msa0097890:CDS 40.0%
ACTCAGGAACGATTTACTCA+AGG + chr1_3:3734643-3734662 Msa0097890:CDS 40.0%
AGGAACGATTTACTCAAGGT+AGG + chr1_3:3734647-3734666 Msa0097890:intron 40.0%
TGGTAAGCTTGAAATGGAAC+TGG + chr1_3:3734782-3734801 Msa0097890:CDS 40.0%
! ATCTGAGACTGAGAATGATG+TGG - chr1_3:3734874-3734893 None:intergenic 40.0%
TCATTCTCAGTCTCAGATTG+TGG + chr1_3:3734876-3734895 Msa0097890:CDS 40.0%
CATTCTCAGTCTCAGATTGT+GGG + chr1_3:3734877-3734896 Msa0097890:CDS 40.0%
GTCTGAAAAGCAGCACAAAA+AGG - chr1_3:3735051-3735070 None:intergenic 40.0%
AGCAAAGAGAGGGAAAGAAA+AGG - chr1_3:3735087-3735106 None:intergenic 40.0%
AATGTCAGGAAGCAAAGAGA+GGG - chr1_3:3735097-3735116 None:intergenic 40.0%
AAATGTCAGGAAGCAAAGAG+AGG - chr1_3:3735098-3735117 None:intergenic 40.0%
GTTAGGGACCTAGATATTTG+AGG + chr1_3:3735151-3735170 Msa0097890:intron 40.0%
AATCCTCGCCTCAAATATCT+AGG - chr1_3:3735162-3735181 None:intergenic 40.0%
! TTGCTGAAAGATTCTGGAAG+AGG - chr1_3:3735312-3735331 None:intergenic 40.0%
TCCAGAATCTTTCAGCAATG+TGG + chr1_3:3735314-3735333 Msa0097890:CDS 40.0%
AATGAACAATGGCTACGTTG+CGG + chr1_3:3735359-3735378 Msa0097890:CDS 40.0%
CAGGAGTTGTATCACTTAGT+GGG - chr1_3:3735431-3735450 None:intergenic 40.0%
ACAGGAGTTGTATCACTTAG+TGG - chr1_3:3735432-3735451 None:intergenic 40.0%
! TTGCTATTATGGGGAAGTAG+TGG - chr1_3:3735539-3735558 None:intergenic 40.0%
ATCATCTTCGGTACGTGTAT+TGG - chr1_3:3735735-3735754 None:intergenic 40.0%
! TGATTTGGCTGATGTTTGTC+AGG + chr1_3:3735915-3735934 Msa0097890:intron 40.0%
GATTTGGCTGATGTTTGTCA+GGG + chr1_3:3735916-3735935 Msa0097890:intron 40.0%
AACTGCAAAGTATGAACGAG+AGG + chr1_3:3735951-3735970 Msa0097890:CDS 40.0%
CTATCTTGAGCTTGTGTCAT+AGG + chr1_3:3736255-3736274 Msa0097890:intron 40.0%
ACAGGAAATGGGAGAAAGAT+TGG - chr1_3:3736296-3736315 None:intergenic 40.0%
TCTTTCTCCCATTTCCTGTA+TGG + chr1_3:3736297-3736316 Msa0097890:intron 40.0%
ATCAAGGCCATACAGGAAAT+GGG - chr1_3:3736307-3736326 None:intergenic 40.0%
CTTCCTCTGAATTCTTTCTC+TGG - chr1_3:3736416-3736435 None:intergenic 40.0%
CCGTCAAACAAGCAACTAAT+AGG + chr1_3:3736438-3736457 Msa0097890:CDS 40.0%
!! CTACAAAGATAGCTTTGAGG+AGG + chr1_3:3736536-3736555 Msa0097890:CDS 40.0%
!! GGAGGTTTTATCAGTAATGC+AGG + chr1_3:3736554-3736573 Msa0097890:CDS 40.0%
!!! GAACCTCTTTTTGTTGTTCC+TGG - chr1_3:3736784-3736803 None:intergenic 40.0%
AACAAAAAGAGGTTCGTGAG+AGG + chr1_3:3736789-3736808 Msa0097890:CDS 40.0%
TATAGTCTGTGTGTCACATC+AGG + chr1_3:3737087-3737106 Msa0097890:intron 40.0%
GAGTTATACGAGATCTCTCA+TGG + chr1_3:3737135-3737154 Msa0097890:intron 40.0%
TTCACTCATTTCACTTTGGG+GGG - chr1_3:3737332-3737351 None:intergenic 40.0%
GGGAAATCACTTGATAGACT+TGG + chr1_3:3737406-3737425 Msa0097890:intron 40.0%
TTGCAGATCGCAGAAAATAG+CGG - chr1_3:3737638-3737657 None:intergenic 40.0%
! TTTCTAAAGAGCGCAACCAT+AGG + chr1_3:3737765-3737784 Msa0097890:intron 40.0%
AAAGATACGAAAGCCTCGAA+AGG + chr1_3:3737935-3737954 Msa0097890:CDS 40.0%
AAGATACGAAAGCCTCGAAA+GGG + chr1_3:3737936-3737955 Msa0097890:CDS 40.0%
AAAGTTGTAACTCCCTTTCG+AGG - chr1_3:3737951-3737970 None:intergenic 40.0%
TTGCAATTGTGTCAAGCCAA+AGG + chr1_3:3738025-3738044 Msa0097890:CDS 40.0%
TGCAATTGTGTCAAGCCAAA+GGG + chr1_3:3738026-3738045 Msa0097890:CDS 40.0%
AAGGAAAAATCTAGAAGGGG+AGG + chr1_3:3738086-3738105 Msa0097890:CDS 40.0%
CGGAAATACCCTTCGACAAA+CGG - chr1_3:3730777-3730796 None:intergenic 45.0%
AACGAGAGGACGAACTCTAA+CGG - chr1_3:3730917-3730936 None:intergenic 45.0%
ACGGAATCTGAAGAAACGAG+AGG - chr1_3:3730931-3730950 None:intergenic 45.0%
ATTCCGTCAATGGAAGCTTC+TGG + chr1_3:3730944-3730963 Msa0097890:CDS 45.0%
CTTCCAGAAGCTTCCATTGA+CGG - chr1_3:3730950-3730969 None:intergenic 45.0%
GAAGAGAAATGCGGTTATCG+TGG - chr1_3:3730975-3730994 None:intergenic 45.0%
AGTTAGAGAGAGGAGTTCCA+TGG - chr1_3:3731005-3731024 None:intergenic 45.0%
GCATAGGAAGAGTTAGAGAG+AGG - chr1_3:3731015-3731034 None:intergenic 45.0%
ATCATTCTCGCTGCTCTCAA+TGG + chr1_3:3731194-3731213 Msa0097890:CDS 45.0%
ATGCTGTCGGTCCAAAATTG+AGG - chr1_3:3731521-3731540 None:intergenic 45.0%
CGAGCTGGTCAAATGATGTA+TGG + chr1_3:3731554-3731573 Msa0097890:intron 45.0%
TTAGATGGGACGACAGATGT+TGG - chr1_3:3731615-3731634 None:intergenic 45.0%
CGTCCCATCTAAGTCAATGA+CGG + chr1_3:3731623-3731642 Msa0097890:intron 45.0%
CTTTGTTGAGCCTCCCAAAT+AGG - chr1_3:3731945-3731964 None:intergenic 45.0%
TCAGGGACTGCATTTGCTTA+TGG + chr1_3:3732270-3732289 Msa0097890:intron 45.0%
CAGGGACTGCATTTGCTTAT+GGG + chr1_3:3732271-3732290 Msa0097890:intron 45.0%
GCAAATTCATGAGAGTCTGG+AGG + chr1_3:3732579-3732598 Msa0097890:CDS 45.0%
ATTCATGAGAGTCTGGAGGT+TGG + chr1_3:3732583-3732602 Msa0097890:CDS 45.0%
GATCTCCTTAAAGTAGGGGA+AGG + chr1_3:3732798-3732817 Msa0097890:CDS 45.0%
GGTGATTGAAAGCAAAGGGA+AGG + chr1_3:3733096-3733115 Msa0097890:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_3:3733232-3733251 None:intergenic 45.0%
!! TAGATCTTGCTGGCTCTGAA+AGG + chr1_3:3733563-3733582 Msa0097890:CDS 45.0%
ATTGCAAAGACTGGAGCTGA+TGG + chr1_3:3733586-3733605 Msa0097890:CDS 45.0%
TGTAGCACCAGAAGAGGTAA+AGG + chr1_3:3733879-3733898 Msa0097890:intron 45.0%
CGTATTAGGAAGCTTACTCG+GGG + chr1_3:3734266-3734285 Msa0097890:intron 45.0%
!! CAGATGCAGCCTTGTTAAAG+CGG + chr1_3:3734473-3734492 Msa0097890:CDS 45.0%
!! TAGCTGTTGCCGCTTTAACA+AGG - chr1_3:3734485-3734504 None:intergenic 45.0%
GCTTGAAATGGAACTGGAAG+AGG + chr1_3:3734788-3734807 Msa0097890:CDS 45.0%
AAATGGAACTGGAAGAGGAG+AGG + chr1_3:3734793-3734812 Msa0097890:CDS 45.0%
GACTGAGAATGATGTGGTAC+TGG - chr1_3:3734868-3734887 None:intergenic 45.0%
TTGTGGGACGAACAACAATC+AGG + chr1_3:3734893-3734912 Msa0097890:CDS 45.0%
!! GCACTGGCTGTCTTTAAACA+GGG - chr1_3:3735240-3735259 None:intergenic 45.0%
!! AGCACTGGCTGTCTTTAAAC+AGG - chr1_3:3735241-3735260 None:intergenic 45.0%
! TCGCTTGACAACAAAAGCAC+TGG - chr1_3:3735256-3735275 None:intergenic 45.0%
! CTGAAAGATTCTGGAAGAGG+AGG - chr1_3:3735309-3735328 None:intergenic 45.0%
GCCACATTGCTGAAAGATTC+TGG - chr1_3:3735318-3735337 None:intergenic 45.0%
ATGTGGCTGACGAAGATATG+TGG + chr1_3:3735331-3735350 Msa0097890:CDS 45.0%
CATCAAGGCCATACAGGAAA+TGG - chr1_3:3736308-3736327 None:intergenic 45.0%
ACATAGCATCAAGGCCATAC+AGG - chr1_3:3736314-3736333 None:intergenic 45.0%
GCTTGCAGTACATAGCATCA+AGG - chr1_3:3736323-3736342 None:intergenic 45.0%
!!! TTGGAAGGTCACTTTTCCAC+TGG + chr1_3:3736743-3736762 Msa0097890:CDS 45.0%
!!! TGGAAGGTCACTTTTCCACT+GGG + chr1_3:3736744-3736763 Msa0097890:CDS 45.0%
! TTGTGTTGACAGCTGCACAA+AGG - chr1_3:3736881-3736900 None:intergenic 45.0%
TTTGTGCAGCTGTCAACACA+AGG + chr1_3:3736880-3736899 Msa0097890:CDS 45.0%
GTCAACACAAGGTAGTTGTC+TGG + chr1_3:3736891-3736910 Msa0097890:intron 45.0%
AGTGAATGTGGGGAAAGTTG+AGG + chr1_3:3737346-3737365 Msa0097890:intron 45.0%
GCTATAGCACTATTGCGTAG+CGG + chr1_3:3737600-3737619 Msa0097890:intron 45.0%
GATCGCAGAAAATAGCGGTT+TGG - chr1_3:3737633-3737652 None:intergenic 45.0%
! TGTTACAAAGGGCTCTGGTT+TGG + chr1_3:3737870-3737889 Msa0097890:intron 45.0%
! GTTACAAAGGGCTCTGGTTT+GGG + chr1_3:3737871-3737890 Msa0097890:intron 45.0%
AAGTCGCTTATTTCCTTGCG+TGG + chr1_3:3738144-3738163 Msa0097890:CDS 45.0%
!!! TAATAAATTTTTATATTGAA+AGG - chr1_3:3733206-3733225 None:intergenic 5.0%
!!! TTATTTTAATTTTATAACTT+TGG + chr1_3:3733732-3733751 Msa0097890:intron 5.0%
CGTCAATGGAAGCTTCTGGA+AGG + chr1_3:3730948-3730967 Msa0097890:CDS 50.0%
GCTGCTCTCAATGGCTTCAA+TGG + chr1_3:3731203-3731222 Msa0097890:CDS 50.0%
GGACCGACAGCATAAATGAG+AGG + chr1_3:3731528-3731547 Msa0097890:intron 50.0%
ATCTGAGGGACCTATTTGGG+AGG + chr1_3:3731932-3731951 Msa0097890:intron 50.0%
CTTATGGGCAGACAAGCAGT+GGG + chr1_3:3732286-3732305 Msa0097890:CDS 50.0%
GGGAAGACGTTCACGATGAA+TGG + chr1_3:3732306-3732325 Msa0097890:CDS 50.0%
GAATGGTTGTGAGACTGACC+CGG + chr1_3:3732323-3732342 Msa0097890:CDS 50.0%
AATGGTTGTGAGACTGACCC+GGG + chr1_3:3732324-3732343 Msa0097890:CDS 50.0%
!! AGCGGGGAGTATTTGTTGCA+GGG + chr1_3:3732736-3732755 Msa0097890:intron 50.0%
! ATTTGTTGCAGGGCTCAGAG+AGG + chr1_3:3732746-3732765 Msa0097890:CDS 50.0%
CGTATACTCCAACCTGCTCT+TGG + chr1_3:3733826-3733845 Msa0097890:CDS 50.0%
ATACTCCAACCTGCTCTTGG+TGG + chr1_3:3733829-3733848 Msa0097890:CDS 50.0%
CATTTCCACCAAGAGCAGGT+TGG - chr1_3:3733837-3733856 None:intergenic 50.0%
TTGGCATTTCCACCAAGAGC+AGG - chr1_3:3733841-3733860 None:intergenic 50.0%
ATGCACTGTAGCACCAGAAG+AGG + chr1_3:3733873-3733892 Msa0097890:CDS 50.0%
ACCAGAAGAGGTAAAGGCTG+TGG + chr1_3:3733885-3733904 Msa0097890:intron 50.0%
ACCACAGCCTTTACCTCTTC+TGG - chr1_3:3733889-3733908 None:intergenic 50.0%
TCCATTCAGGGATCTCATGC+TGG + chr1_3:3734596-3734615 Msa0097890:intron 50.0%
CCATTCAGGGATCTCATGCT+GGG + chr1_3:3734597-3734616 Msa0097890:intron 50.0%
CATTCAGGGATCTCATGCTG+GGG + chr1_3:3734598-3734617 Msa0097890:intron 50.0%
GGAGCGTGGTAAGCTTGAAA+TGG + chr1_3:3734776-3734795 Msa0097890:CDS 50.0%
! GGACCTAGATATTTGAGGCG+AGG + chr1_3:3735156-3735175 Msa0097890:CDS 50.0%
GGAAGAGGAGGACTACTATC+TGG - chr1_3:3735297-3735316 None:intergenic 50.0%
GATTGCAGCATAGTTCCCAG+TGG - chr1_3:3736762-3736781 None:intergenic 50.0%
TGGGAACTATGCTGCAATCC+AGG + chr1_3:3736763-3736782 Msa0097890:CDS 50.0%
!! CTCTGGTTTGGGAGGAGAAA+CGG + chr1_3:3737882-3737901 Msa0097890:CDS 50.0%
GCTTATGGGCAGACAAGCAG+TGG + chr1_3:3732285-3732304 Msa0097890:CDS 55.0%
CTGCAACAAATACTCCCCGC+TGG - chr1_3:3732737-3732756 None:intergenic 55.0%
!! CAGCGGGGAGTATTTGTTGC+AGG + chr1_3:3732735-3732754 Msa0097890:intron 55.0%
TAGGAAGCTTACTCGGGGCA+AGG + chr1_3:3734271-3734290 Msa0097890:intron 55.0%
GCTTACTCGGGGCAAGGAAA+TGG + chr1_3:3734277-3734296 Msa0097890:intron 55.0%
CCCAGCATGAGATCCCTGAA+TGG - chr1_3:3734600-3734619 None:intergenic 55.0%
!! ACAAAGGGCTCTGGTTTGGG+AGG + chr1_3:3737874-3737893 Msa0097890:intron 55.0%
GGTCTTAAGATCGCCACGCA+AGG - chr1_3:3738160-3738179 None:intergenic 55.0%
CTGACCCGGGAGTGATTCCT+CGG + chr1_3:3732337-3732356 Msa0097890:CDS 60.0%
TGACCCGGGAGTGATTCCTC+GGG + chr1_3:3732338-3732357 Msa0097890:CDS 60.0%
ACTGCCCGAGGAATCACTCC+CGG - chr1_3:3732345-3732364 None:intergenic 60.0%
CTGCCCGAGGAATCACTCCC+GGG - chr1_3:3732344-3732363 None:intergenic 65.0%
! TGCTGGGGTGCTCGAGCAAG+AGG + chr1_3:3734613-3734632 Msa0097890:CDS 65.0%
GCACTGTGTGGCTAGTGCGC+TGG + chr1_3:3735829-3735848 Msa0097890:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 3730724 3738360 3730724 ID=Msa0097890;Name=Msa0097890
chr1_3 mRNA 3730724 3738360 3730724 ID=Msa0097890-mRNA-1;Parent=Msa0097890;Name=Msa0097890-mRNA-1;_AED=0.11;_eAED=0.11;_QI=171|0.94|0.94|1|1|1|18|115|833
chr1_3 exon 3730724 3731039 3730724 ID=Msa0097890-mRNA-1:exon:1179;Parent=Msa0097890-mRNA-1
chr1_3 exon 3731135 3731224 3731135 ID=Msa0097890-mRNA-1:exon:1180;Parent=Msa0097890-mRNA-1
chr1_3 exon 3732274 3732392 3732274 ID=Msa0097890-mRNA-1:exon:1181;Parent=Msa0097890-mRNA-1
chr1_3 exon 3732487 3732651 3732487 ID=Msa0097890-mRNA-1:exon:1182;Parent=Msa0097890-mRNA-1
chr1_3 exon 3732738 3732819 3732738 ID=Msa0097890-mRNA-1:exon:1183;Parent=Msa0097890-mRNA-1
chr1_3 exon 3732920 3732987 3732920 ID=Msa0097890-mRNA-1:exon:1184;Parent=Msa0097890-mRNA-1
chr1_3 exon 3733097 3733174 3733097 ID=Msa0097890-mRNA-1:exon:1185;Parent=Msa0097890-mRNA-1
chr1_3 exon 3733556 3733698 3733556 ID=Msa0097890-mRNA-1:exon:1186;Parent=Msa0097890-mRNA-1
chr1_3 exon 3733792 3733894 3733792 ID=Msa0097890-mRNA-1:exon:1187;Parent=Msa0097890-mRNA-1
chr1_3 exon 3733986 3734066 3733986 ID=Msa0097890-mRNA-1:exon:1188;Parent=Msa0097890-mRNA-1
chr1_3 exon 3734466 3734534 3734466 ID=Msa0097890-mRNA-1:exon:1189;Parent=Msa0097890-mRNA-1
chr1_3 exon 3734605 3734664 3734605 ID=Msa0097890-mRNA-1:exon:1190;Parent=Msa0097890-mRNA-1
chr1_3 exon 3734768 3734914 3734768 ID=Msa0097890-mRNA-1:exon:1191;Parent=Msa0097890-mRNA-1
chr1_3 exon 3735156 3735449 3735156 ID=Msa0097890-mRNA-1:exon:1192;Parent=Msa0097890-mRNA-1
chr1_3 exon 3735937 3736029 3735937 ID=Msa0097890-mRNA-1:exon:1193;Parent=Msa0097890-mRNA-1
chr1_3 exon 3736417 3736575 3736417 ID=Msa0097890-mRNA-1:exon:1194;Parent=Msa0097890-mRNA-1
chr1_3 exon 3736662 3736901 3736662 ID=Msa0097890-mRNA-1:exon:1195;Parent=Msa0097890-mRNA-1
chr1_3 exon 3737880 3738360 3737880 ID=Msa0097890-mRNA-1:exon:1196;Parent=Msa0097890-mRNA-1
chr1_3 five_prime_UTR 3730724 3730894 3730724 ID=Msa0097890-mRNA-1:five_prime_utr;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3730895 3731039 3730895 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3731135 3731224 3731135 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3732274 3732392 3732274 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3732487 3732651 3732487 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3732738 3732819 3732738 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3732920 3732987 3732920 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3733097 3733174 3733097 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3733556 3733698 3733556 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3733792 3733894 3733792 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3733986 3734066 3733986 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3734466 3734534 3734466 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3734605 3734664 3734605 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3734768 3734914 3734768 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3735156 3735449 3735156 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3735937 3736029 3735937 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3736417 3736575 3736417 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3736662 3736901 3736662 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 CDS 3737880 3738245 3737880 ID=Msa0097890-mRNA-1:cds;Parent=Msa0097890-mRNA-1
chr1_3 three_prime_UTR 3738246 3738360 3738246 ID=Msa0097890-mRNA-1:three_prime_utr;Parent=Msa0097890-mRNA-1
Gene Sequence

>Msa0097890

ATGGAAAAAATCTGCGTTGCCGTTAGAGTTCGTCCTCTCGTTTCTTCAGATTCCGTCAATGGAAGCTTCTGGAAGGTCCACGATAACCGCATTTCTCTTCACAAGATCCATGGAACTCCTCTCTCTAACTCTTCCTATGCTTTCGATCATGTATTCGATGAATCTAGCTCGAATTCAAGTGTTTATGAGATTCTCACTAAGGATATCATTCTCGCTGCTCTCAATGGCTTCAATGGGACTGCATTTGCTTATGGGCAGACAAGCAGTGGGAAGACGTTCACGATGAATGGTTGTGAGACTGACCCGGGAGTGATTCCTCGGGCAGTCAAAGATATATTTTCAAAAATTGAGACGATGACTGAACGAGAGTTTTTAATTCGAGTTTCCTACATGGAGATTTACAATGAAGAGATTAATGACCTTCTTGTTGTTGAAAATCAGAAATTGCAAATTCATGAGAGTCTGGAGGTTGGTTACTTGTCACTTCACTTTGCTTTTTCTTTTGTGGTTAATGTTGGTCGGGGAGTATTTGTTGCAGGGCTCAGAGAGGAAATTGTCAATAATGCTGAACAAGTTCTAGATCTCCTTAAAGTAGGGGAAGTGAACAGGCACTTTGGTGAGACAAATATGAATGTAAGGAGTAGCAGATCACATACAATATTTAGAATGGTGATTGAAAGCAAAGGGAAGGATTCCGATTCTTCCGATGATAGTTCAATAAGTGACATTGTTCGAGTTTCAGTCTTGAATTTAGTAGATCTTGCTGGCTCTGAAAGGATTGCAAAGACTGGAGCTGATGGAGTACGTTTGAAAGAAGGAAAACACATTAACAAAAGCTTGATGATTCTAGGAAATGTTATTAATAAATTAAGTGAGGGCTCAAAAAATAGGGGACATATCCCATATCGTGATAGTAAATTAACACGTATACTCCAACCTGCTCTTGGTGGAAATGCCAAAACATCCATTATATGCACTGTAGCACCAGAAGAGGTTCACATTGAAGAAACAAAGGGAACTCTTCAGTTTGCTAGTAGAGCCAAACGCATCACCAATTGTGTTCAAGTGAATGAGATTCTAACAGATGCAGCCTTGTTAAAGCGGCAACAGCTAGAGATAGAAGAGCTACGTAAGAAACTTGAGGGATCTCATGCTGGGGTGCTCGAGCAAGAGGTTCTTAAACTCAGGAACGATTTACTCAAGTATGAAATGGAGCGTGGTAAGCTTGAAATGGAACTGGAAGAGGAGAGGAAATCACGTAATCAATGGATTAGCGAGCAACAGAAGAAAATTGAAAATTCCAGTACCACATCATTCTCAGTCTCAGATTGTGGGACGAACAACAATCAGGGACCTAGATATTTGAGGCGAGGATTAATTGAAGAGTACAGTGACATTAATAGTACATCTCAAGGAGATATATTTAAATCTCCCTGTTTAAAGACAGCCAGTGCTTTTGTTGTCAAGCGATCAAGAAATTCAACATTGCCAGATAGTAGTCCTCCTCTTCCAGAATCTTTCAGCAATGTGGCTGACGAAGATATGTGGTTGAAAATGAACAATGGCTACGTTGCGGACCTTGATTCTCTTCAAATTACTCCCACTCGAAATATTCAATCATTCCCACTAAGTGATACAACTCCTGGTTGTATAAGTCAAACTGCAAAGTATGAACGAGAGGTTCAAGATTTGAGAAGACAACTAGAGCTTGCAAATGAAAAGATAAATGAACTGGAGAGAAAGAATTCAGAGGAAGTACCGTCAAACAAGCAACTAATAGGCGAAATCTCAGACAATCAACAAGAAACACCGCTAATTCAAGAATTGCCTATGAGGTTATCAGAATCTGTGGAAAACTACAAAGATAGCTTTGAGGAGGTTTTATCAGTAATGCAGAGATTTGCATTGGATGGAAAAGTCTCAACAGATAAAATGCTTTCAACCATGAGTGAAATTGGTGCAAATCTATTTGCAGCTTTGGAAGGTCACTTTTCCACTGGGAACTATGCTGCAATCCAGGAACAACAAAAAGAGGTTCGTGAGAGGATGAATAATTTAATTACATCACTGGAGTTATCAGAAAGCTCAATAACAGGAAATCAAAAGAGGACTCCTTTGTGCAGCTGTCAACACAAGGGCTCTGGTTTGGGAGGAGAAACGGAATCTGATTACTCAAAGGATGCTTTAACTGAAAGATACGAAAGCCTCGAAAGGGAGTTACAACTTTTGAAGATCGAAAGAGACTCTTTGCTAGAGAAGTTCTCTGAATCGTCTGATAAACTTGCAATTGTGTCAAGCCAAAGGGAAAATGCTTTGAAAGATTTAAACATTGAAGTACAGAGAAGGAAAAATCTAGAAGGGGAGGTTAAGCAATTTACTGCAGCTTTTGTCTGTCGTCAGAAGTCGCTTATTTCCTTGCGTGGCGATCTTAAGACCAAAATTGAGAAATGGAGAGCTCATACACCAATTTCAGTGCCAAAATCTTTTGGGTGTCAAGACTAA
Protein sequence

>Msa0097890

MEKICVAVRVRPLVSSDSVNGSFWKVHDNRISLHKIHGTPLSNSSYAFDHVFDESSSNSSVYEILTKDIILAALNGFNGTAFAYGQTSSGKTFTMNGCETDPGVIPRAVKDIFSKIETMTEREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLEVGYLSLHFAFSFVVNVGRGVFVAGLREEIVNNAEQVLDLLKVGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKDSDSSDDSSISDIVRVSVLNLVDLAGSERIAKTGADGVRLKEGKHINKSLMILGNVINKLSEGSKNRGHIPYRDSKLTRILQPALGGNAKTSIICTVAPEEVHIEETKGTLQFASRAKRITNCVQVNEILTDAALLKRQQLEIEELRKKLEGSHAGVLEQEVLKLRNDLLKYEMERGKLEMELEEERKSRNQWISEQQKKIENSSTTSFSVSDCGTNNNQGPRYLRRGLIEEYSDINSTSQGDIFKSPCLKTASAFVVKRSRNSTLPDSSPPLPESFSNVADEDMWLKMNNGYVADLDSLQITPTRNIQSFPLSDTTPGCISQTAKYEREVQDLRRQLELANEKINELERKNSEEVPSNKQLIGEISDNQQETPLIQELPMRLSESVENYKDSFEEVLSVMQRFALDGKVSTDKMLSTMSEIGANLFAALEGHFSTGNYAAIQEQQKEVRERMNNLITSLELSESSITGNQKRTPLCSCQHKGSGLGGETESDYSKDALTERYESLERELQLLKIERDSLLEKFSESSDKLAIVSSQRENALKDLNIEVQRRKNLEGEVKQFTAAFVCRQKSLISLRGDLKTKIEKWRAHTPISVPKSFGCQD*