Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220410 | XP_013465057.1 | 88.401 | 319 | 10 | 2 | 1 | 293 | 1 | 318 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220410 | sp|Q754F0|SYM1_ASHGO | 26.705 | 176 | 98 | 3 | 127 | 272 | 8 | 182 | 1.31e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220410 | A0A072VBB5 | 88.401 | 319 | 10 | 2 | 1 | 293 | 1 | 318 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0086160 | Msa0220410 | -0.818186 | 2.235293e-52 | -8.615850e-47 |
| Msa0089540 | Msa0220410 | -0.818124 | 2.308313e-52 | -8.615850e-47 |
| Msa0093940 | Msa0220410 | 0.909958 | 3.200952e-82 | -8.615850e-47 |
| Msa0135850 | Msa0220410 | 0.811138 | 8.132507e-51 | -8.615850e-47 |
| Msa0220410 | Msa0223190 | 0.802658 | 5.053200e-49 | -8.615850e-47 |
| Msa0220410 | Msa0261650 | 0.809173 | 2.156696e-50 | -8.615850e-47 |
| Msa0220410 | Msa0299540 | 0.959280 | 2.868096e-117 | -8.615850e-47 |
| Msa0220410 | Msa0302310 | 0.810498 | 1.118590e-50 | -8.615850e-47 |
| Msa0220410 | Msa0372100 | -0.802768 | 4.796817e-49 | -8.615850e-47 |
| Msa0220410 | Msa0378620 | 0.812308 | 4.525555e-51 | -8.615850e-47 |
| Msa0220410 | Msa0388520 | -0.809699 | 1.663376e-50 | -8.615850e-47 |
| Msa0220410 | Msa0398410 | -0.806522 | 7.896137e-50 | -8.615850e-47 |
| Msa0220410 | Msa0425020 | 0.806222 | 9.132729e-50 | -8.615850e-47 |
| Msa0220410 | Msa0476730 | 0.832152 | 1.112547e-55 | -8.615850e-47 |
| Msa0220410 | Msa0496470 | 0.807453 | 5.017797e-50 | -8.615850e-47 |
| Msa0220410 | Msa0496570 | 0.808021 | 3.800307e-50 | -8.615850e-47 |
| Msa0220410 | Msa0521100 | 0.806254 | 8.994325e-50 | -8.615850e-47 |
| Msa0220410 | Msa0521730 | -0.821422 | 4.072897e-53 | -8.615850e-47 |
| Msa0220410 | Msa0619320 | 0.831342 | 1.762223e-55 | -8.615850e-47 |
| Msa0220410 | Msa0704780 | 0.834413 | 3.041034e-56 | -8.615850e-47 |
| Msa0220410 | Msa1025200 | -0.807486 | 4.938056e-50 | -8.615850e-47 |
| Msa0220410 | Msa1025220 | -0.809035 | 2.308755e-50 | -8.615850e-47 |
| Msa0220410 | Msa1085570 | 0.815701 | 8.077803e-52 | -8.615850e-47 |
| Msa0220410 | Msa1085850 | -0.802712 | 4.924834e-49 | -8.615850e-47 |
| Msa0220410 | Msa1344610 | 0.805796 | 1.123079e-49 | -8.615850e-47 |
| Msa0220410 | Msa1347610 | -0.808662 | 2.774072e-50 | -8.615850e-47 |
| Msa0220410 | Msa1368170 | -0.822073 | 2.879303e-53 | -8.615850e-47 |
| Msa0220410 | Msa1385570 | -0.804711 | 1.894573e-49 | -8.615850e-47 |
| Msa0220410 | Msa1427180 | 0.805974 | 1.029954e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220410 | MtrunA17_Chr2g0324001 | 88.401 | 319 | 10 | 2 | 1 | 293 | 1 | 318 | 0.0 | 561 |
| Msa0220410 | MtrunA17_Chr2g0318131 | 64.453 | 256 | 65 | 1 | 57 | 286 | 110 | 365 | 1.76e-119 | 347 |
| Msa0220410 | MtrunA17_Chr2g0324031 | 84.848 | 33 | 5 | 0 | 194 | 226 | 26 | 58 | 1.11e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220410 | AT4G03410.2 | 61.783 | 314 | 84 | 3 | 5 | 289 | 13 | 319 | 6.26e-139 | 396 |
| Msa0220410 | AT4G03410.1 | 62.258 | 310 | 81 | 3 | 5 | 285 | 13 | 315 | 1.14e-138 | 394 |
| Msa0220410 | AT1G52870.2 | 54.830 | 352 | 84 | 5 | 2 | 280 | 3 | 352 | 3.60e-125 | 362 |
| Msa0220410 | AT1G52870.1 | 53.333 | 270 | 77 | 4 | 2 | 224 | 3 | 270 | 7.38e-92 | 275 |
Find 113 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATTAAATTATTCTTCTT+TGG | 0.169387 | 2_1:+68608442 | Msa0220410:three_prime_UTR |
| CTGTGGAACAAAGGCTTCTT+TGG | 0.173165 | 2_1:+68606844 | Msa0220410:CDS |
| GTTTGGTGCGAAATTAATTA+AGG | 0.189591 | 2_1:-68604660 | None:intergenic |
| TCTTAGTTACCTTAGAATTT+TGG | 0.194039 | 2_1:-68607780 | None:intergenic |
| CACAGGCAGGCTGGAAGCTT+TGG | 0.250296 | 2_1:+68606787 | Msa0220410:intron |
| TTCGCCCATCTGATTACTTA+TGG | 0.254055 | 2_1:+68606813 | Msa0220410:CDS |
| ATCAATGCTGCAATCGTTCT+TGG | 0.258440 | 2_1:+68604956 | Msa0220410:CDS |
| GCTGCAATCGTTCTTGGATT+TGG | 0.262559 | 2_1:+68604962 | Msa0220410:CDS |
| ATATTAAATTATTCTTCTTT+GGG | 0.263210 | 2_1:+68608443 | Msa0220410:three_prime_UTR |
| TCCGCCTATTATATACTTTC+CGG | 0.278321 | 2_1:+68608496 | Msa0220410:three_prime_UTR |
| AAACTGTGTGGTCAGCTATT+TGG | 0.279478 | 2_1:+68606190 | Msa0220410:CDS |
| TGGACTGTATTGAGCTCATC+TGG | 0.292811 | 2_1:+68606868 | Msa0220410:CDS |
| TATACAGGATTGTACATAAT+AGG | 0.312831 | 2_1:-68608401 | None:intergenic |
| TGCGGATTGCGGTGCTGTGC+TGG | 0.314198 | 2_1:-68604428 | None:intergenic |
| ATGATCAATTGTGAGCAATT+TGG | 0.323543 | 2_1:-68604999 | None:intergenic |
| ACAACCGGAAAGTATATAAT+AGG | 0.337230 | 2_1:-68608500 | None:intergenic |
| GCATCGTATGTTCTTTATAC+AGG | 0.347558 | 2_1:-68608416 | None:intergenic |
| TCACAATTGATCATGATTAC+TGG | 0.351701 | 2_1:+68605008 | Msa0220410:CDS |
| TTGGCGGTGACGAATTATTC+AGG | 0.353350 | 2_1:+68608275 | Msa0220410:three_prime_UTR |
| TGTGGAACAAAGGCTTCTTT+GGG | 0.369696 | 2_1:+68606845 | Msa0220410:CDS |
| CTTGTTGGGTTTACTCTCCA+TGG | 0.385473 | 2_1:+68605990 | Msa0220410:CDS |
| TATACTTGTTGTGCATCCTT+TGG | 0.387734 | 2_1:+68608256 | Msa0220410:three_prime_UTR |
| TACACCAAGCCAAAATTCTA+AGG | 0.390257 | 2_1:+68607771 | Msa0220410:CDS |
| CTATTTAGATCAGGTCTTGT+TGG | 0.390942 | 2_1:+68605975 | Msa0220410:CDS |
| TTTGGTGCGAAATTAATTAA+GGG | 0.392774 | 2_1:-68604659 | None:intergenic |
| AAGAACGATTGCAGCATTGA+TGG | 0.399238 | 2_1:-68604954 | None:intergenic |
| AGTGGAGTTGTCTACTCAAT+TGG | 0.403111 | 2_1:+68605804 | Msa0220410:CDS |
| TTGGAACACCATCTACTTTG+TGG | 0.406483 | 2_1:+68606209 | Msa0220410:CDS |
| TATTTAGATCAGGTCTTGTT+GGG | 0.406785 | 2_1:+68605976 | Msa0220410:CDS |
| TGCGAAATTAATTAAGGGAT+TGG | 0.407194 | 2_1:-68604654 | None:intergenic |
| TGGTCAAAAGCAACTTTAGC+AGG | 0.412786 | 2_1:-68606168 | None:intergenic |
| TGGTAGCATATATATATAAC+AGG | 0.417535 | 2_1:+68604539 | Msa0220410:five_prime_UTR |
| GAAAGGAGGTAAGGAGATGT+GGG | 0.419167 | 2_1:-68604762 | None:intergenic |
| GGAACTCTGTCACTCTCAAC+TGG | 0.421878 | 2_1:-68604466 | None:intergenic |
| AAATAGCTGACCACACAGTT+TGG | 0.423298 | 2_1:-68606188 | None:intergenic |
| CAGGGACAACCCACCATTGT+TGG | 0.429883 | 2_1:-68606149 | None:intergenic |
| AGAAAGGAGGTAAGGAGATG+TGG | 0.435548 | 2_1:-68604763 | None:intergenic |
| ATAGGCGGATTGTATATAAT+AGG | 0.435845 | 2_1:-68608482 | None:intergenic |
| TTGTCTACTCAATTGGAGAT+TGG | 0.442062 | 2_1:+68605811 | Msa0220410:CDS |
| TAGGCAATCCAATTGTGTTC+AGG | 0.443916 | 2_1:-68605735 | None:intergenic |
| TGCAGCATTGATGGCACGTC+CGG | 0.446757 | 2_1:-68604945 | None:intergenic |
| TTGGGAAGAGAAAGGAGGTA+AGG | 0.452969 | 2_1:-68604771 | None:intergenic |
| GGTTTCTTCTTCGCCTTCCA+AGG | 0.454215 | 2_1:+68604886 | Msa0220410:CDS |
| ACCCAAAACCACAAAGTAGA+TGG | 0.457211 | 2_1:-68606217 | None:intergenic |
| AAGTGATAATATATTACAAC+CGG | 0.457860 | 2_1:-68608515 | None:intergenic |
| AGAGGATCGTGAAGCAGCTT+CGG | 0.458460 | 2_1:+68604832 | Msa0220410:CDS |
| CAAAATATATAGTGCTATGA+AGG | 0.459856 | 2_1:+68605921 | Msa0220410:intron |
| TTGCGGTGCTGTGCTGGAAA+TGG | 0.468112 | 2_1:-68604422 | None:intergenic |
| GAGATGTGGGGCTTTGAGAA+GGG | 0.469500 | 2_1:-68604749 | None:intergenic |
| TCTTTCTTTAAATTCTCTCA+TGG | 0.476604 | 2_1:+68604691 | Msa0220410:exon |
| GGTTCTAGTTGAGAATTGAT+TGG | 0.477105 | 2_1:-68604599 | None:intergenic |
| AAATTAATTAAGGGATTGGT+GGG | 0.477447 | 2_1:-68604650 | None:intergenic |
| AATATGTGCCTGAACACAAT+TGG | 0.484652 | 2_1:+68605727 | Msa0220410:CDS |
| TTTGATTCTACAGAGAAAGA+AGG | 0.485854 | 2_1:-68604620 | None:intergenic |
| AATTGGAGATTGGATTGCTC+AGG | 0.486533 | 2_1:+68605821 | Msa0220410:CDS |
| TGCTTTCAGAGATTGCTCAT+AGG | 0.490513 | 2_1:-68605754 | None:intergenic |
| GAGGAAGTGTCAGAAACAAC+AGG | 0.491215 | 2_1:+68607742 | Msa0220410:CDS |
| CTCTCAACTGGAAGAGAAGA+GGG | 0.492330 | 2_1:-68604454 | None:intergenic |
| TTAGCTAAAATGGCAATAAG+TGG | 0.494093 | 2_1:+68605786 | Msa0220410:CDS |
| AATATGCTTCACAGGCAGGC+TGG | 0.502341 | 2_1:+68606778 | Msa0220410:intron |
| GGAGATGTGGGGCTTTGAGA+AGG | 0.505377 | 2_1:-68604750 | None:intergenic |
| AGGATCTCAATTGAAGTTGA+AGG | 0.512181 | 2_1:+68608184 | Msa0220410:three_prime_UTR |
| GAAATTAATTAAGGGATTGG+TGG | 0.516216 | 2_1:-68604651 | None:intergenic |
| TACTTATGGTGTGGTTCCTG+TGG | 0.517838 | 2_1:+68606827 | Msa0220410:CDS |
| ACTTGTTGTGCATCCTTTGG+CGG | 0.518337 | 2_1:+68608259 | Msa0220410:three_prime_UTR |
| AGCAACCTCTGTGATACCCT+TGG | 0.523659 | 2_1:-68604903 | None:intergenic |
| GTATAAAGAACATACGATGC+TGG | 0.523748 | 2_1:+68608419 | Msa0220410:three_prime_UTR |
| GAATAATTCGTCACCGCCAA+AGG | 0.526939 | 2_1:-68608272 | None:intergenic |
| GGGGCTTTGAGAAGGGAAGG+AGG | 0.527578 | 2_1:-68604742 | None:intergenic |
| TTAAATTATTCTTCTTTGGG+GGG | 0.531443 | 2_1:+68608446 | Msa0220410:three_prime_UTR |
| CGAGCGCGGCTATTTAGATC+AGG | 0.532514 | 2_1:+68605966 | Msa0220410:CDS |
| CAAAGAAGCCTTTGTTCCAC+AGG | 0.539036 | 2_1:-68606843 | None:intergenic |
| TGTGGGGCTTTGAGAAGGGA+AGG | 0.541270 | 2_1:-68604745 | None:intergenic |
| GGAACAAAGGCTTCTTTGGG+TGG | 0.543292 | 2_1:+68606848 | Msa0220410:CDS |
| TATTAAATTATTCTTCTTTG+GGG | 0.545614 | 2_1:+68608444 | Msa0220410:three_prime_UTR |
| CCACACCATAAGTAATCAGA+TGG | 0.560187 | 2_1:-68606818 | None:intergenic |
| GTTTCTTCTTCGCCTTCCAA+GGG | 0.562683 | 2_1:+68604887 | Msa0220410:CDS |
| GGACTGTATTGAGCTCATCT+GGG | 0.562988 | 2_1:+68606869 | Msa0220410:CDS |
| AATTGAAGTTGAAAATTCGA+AGG | 0.567007 | 2_1:+68608164 | Msa0220410:three_prime_UTR |
| GGATTTCGATATACTACATA+CGG | 0.568022 | 2_1:+68604368 | Msa0220410:five_prime_UTR |
| TTGGTTTGGGAAGAGAAAGG+AGG | 0.568112 | 2_1:-68604776 | None:intergenic |
| CCATCTGATTACTTATGGTG+TGG | 0.569311 | 2_1:+68606818 | Msa0220410:CDS |
| AATAGTGAGAAAGAGATCCA+TGG | 0.572551 | 2_1:-68606007 | None:intergenic |
| ATTAAATTATTCTTCTTTGG+GGG | 0.575116 | 2_1:+68608445 | Msa0220410:three_prime_UTR |
| TGACTCAGCTTAAAATTCGA+AGG | 0.575848 | 2_1:+68608136 | Msa0220410:three_prime_UTR |
| ACAACCCACCATTGTTGGAA+AGG | 0.581867 | 2_1:-68606144 | None:intergenic |
| CTCAACTGGAAGAGAAGAGG+GGG | 0.584107 | 2_1:-68604452 | None:intergenic |
| GGGCTTTGAGAAGGGAAGGA+GGG | 0.590501 | 2_1:-68604741 | None:intergenic |
| ATCAGAATCCCGAAAATCTG+AGG | 0.598586 | 2_1:+68607723 | Msa0220410:CDS |
| ACTCTCAACTGGAAGAGAAG+AGG | 0.604661 | 2_1:-68604455 | None:intergenic |
| GGTCAAAAGCAACTTTAGCA+GGG | 0.608265 | 2_1:-68606167 | None:intergenic |
| TAAGTAATCAGATGGGCGAA+AGG | 0.609767 | 2_1:-68606810 | None:intergenic |
| CATAATCAGCTCCGTTACAG+AGG | 0.615880 | 2_1:+68604814 | Msa0220410:CDS |
| TGCTTCACGATCCTCTGTAA+CGG | 0.624438 | 2_1:-68604825 | None:intergenic |
| AAAGGAGGTAAGGAGATGTG+GGG | 0.626162 | 2_1:-68604761 | None:intergenic |
| AAATAACCACCTCACACAGT+TGG | 0.629043 | 2_1:-68606034 | None:intergenic |
| CGCACGCACAATGTCAACGT+GGG | 0.632810 | 2_1:+68604347 | None:intergenic |
| AATAGAAGAAGCAACTGACA+TGG | 0.637698 | 2_1:-68604714 | None:intergenic |
| ACTGACACTGATATTCTCAC+CGG | 0.639131 | 2_1:+68604926 | Msa0220410:CDS |
| ACCGGAAAGTATATAATAGG+CGG | 0.640507 | 2_1:-68608497 | None:intergenic |
| GGCGGATTGTATATAATAGG+CGG | 0.640755 | 2_1:-68608479 | None:intergenic |
| ACAGGATTGTACATAATAGG+CGG | 0.644993 | 2_1:-68608398 | None:intergenic |
| GTGTGGTTCCTGTGGAACAA+AGG | 0.645875 | 2_1:+68606835 | Msa0220410:CDS |
| ACCTCTGTGATACCCTTGGA+AGG | 0.647729 | 2_1:-68604899 | None:intergenic |
| CTATTACTACCAACTGTGTG+AGG | 0.652660 | 2_1:+68606025 | Msa0220410:CDS |
| TCTCAACTGGAAGAGAAGAG+GGG | 0.668650 | 2_1:-68604453 | None:intergenic |
| CACACCATAAGTAATCAGAT+GGG | 0.679652 | 2_1:-68606817 | None:intergenic |
| GCGAAGAAGAAACCTCCTCG+AGG | 0.711152 | 2_1:-68604877 | None:intergenic |
| AAAAGACAGAAAAGTCCTCG+AGG | 0.718772 | 2_1:+68604862 | Msa0220410:CDS |
| GCCTTCCAAGGGTATCACAG+AGG | 0.723856 | 2_1:+68604898 | Msa0220410:CDS |
| AGACAGAAAAGTCCTCGAGG+AGG | 0.726431 | 2_1:+68604865 | Msa0220410:CDS |
| TCAACTGGAAGAGAAGAGGG+GGG | 0.731319 | 2_1:-68604451 | None:intergenic |
| TCGCACGCACAATGTCAACG+TGG | 0.743406 | 2_1:+68604346 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAAATTATTCTTCTT+TGG | + | chr2_1:68608442-68608461 | Msa0220410:three_prime_UTR | 10.0% |
| !! | ATATTAAATTATTCTTCTTT+GGG | + | chr2_1:68608443-68608462 | Msa0220410:three_prime_UTR | 10.0% |
| !! | ATAAATTAAGAAACATAGTT+TGG | - | chr2_1:68605453-68605472 | None:intergenic | 15.0% |
| !! | TTAAATGAGATTTAATTACA+AGG | - | chr2_1:68607131-68607150 | None:intergenic | 15.0% |
| !! | AATTAAATCTCATTTAAGAA+TGG | + | chr2_1:68607134-68607153 | Msa0220410:intron | 15.0% |
| !!! | TAAGCAAAAATCAATTTTTT+AGG | + | chr2_1:68607300-68607319 | Msa0220410:intron | 15.0% |
| !!! | TTTTTCTTTTTTTTGTTTCT+AGG | + | chr2_1:68607686-68607705 | Msa0220410:intron | 15.0% |
| !!! | GAATTAGAATTTTTAATCAT+AGG | - | chr2_1:68607939-68607958 | None:intergenic | 15.0% |
| !! | TATTAAATTATTCTTCTTTG+GGG | + | chr2_1:68608444-68608463 | Msa0220410:three_prime_UTR | 15.0% |
| !! | CAATTGTATGAGTTTAAAAA+TGG | - | chr2_1:68604521-68604540 | None:intergenic | 20.0% |
| !!! | CATTTTTAAACTCATACAAT+TGG | + | chr2_1:68604519-68604538 | Msa0220410:five_prime_UTR | 20.0% |
| !!! | AAAGAAAGATTTTGTTTGTT+TGG | - | chr2_1:68604680-68604699 | None:intergenic | 20.0% |
| !! | ATAGAAAAAGAAGCAAAATT+TGG | - | chr2_1:68605059-68605078 | None:intergenic | 20.0% |
| !!! | TCAATAATAAGCTAGTTTAT+TGG | - | chr2_1:68605129-68605148 | None:intergenic | 20.0% |
| !! | ATGTATTATAGTAAAGCAAA+CGG | + | chr2_1:68605596-68605615 | Msa0220410:intron | 20.0% |
| !!! | TGTATTTTCTGTATTGTAAA+TGG | + | chr2_1:68605643-68605662 | Msa0220410:intron | 20.0% |
| !!! | TAAGAACTTATTTGTTTCTT+AGG | + | chr2_1:68606310-68606329 | Msa0220410:intron | 20.0% |
| !!! | AAGAACTTATTTGTTTCTTA+GGG | + | chr2_1:68606311-68606330 | Msa0220410:intron | 20.0% |
| !! | GATAAAAAATCAATTCAAAC+AGG | - | chr2_1:68606337-68606356 | None:intergenic | 20.0% |
| !!! | TGAATTGATTTTTTATCTAC+TGG | + | chr2_1:68606340-68606359 | Msa0220410:intron | 20.0% |
| !! | TGTTACAAAAATAAAGCAAA+AGG | + | chr2_1:68606600-68606619 | Msa0220410:intron | 20.0% |
| !!! | CACAATTTTTTTTTTTCAGT+CGG | + | chr2_1:68606951-68606970 | Msa0220410:intron | 20.0% |
| !! | CATTCATTAAATGATGTATT+TGG | + | chr2_1:68607325-68607344 | Msa0220410:intron | 20.0% |
| !!! | TAAGCAAAAATCAACTTTTT+AGG | - | chr2_1:68607389-68607408 | None:intergenic | 20.0% |
| !! | ATGACAGAAAAATAATACAA+CGG | - | chr2_1:68607809-68607828 | None:intergenic | 20.0% |
| !!! | TATTTTTCTGTCATGTTTTA+AGG | + | chr2_1:68607815-68607834 | Msa0220410:intron | 20.0% |
| !! | CAATATATTGAGAAAATTGA+TGG | - | chr2_1:68607980-68607999 | None:intergenic | 20.0% |
| !! | AATAAAACTGCGTAAAAATA+TGG | + | chr2_1:68608043-68608062 | Msa0220410:exon | 20.0% |
| !! | ATAAAACTGCGTAAAAATAT+GGG | + | chr2_1:68608044-68608063 | Msa0220410:exon | 20.0% |
| !! | AAAAACTATATATAGGTTCA+TGG | + | chr2_1:68608069-68608088 | Msa0220410:three_prime_UTR | 20.0% |
| !! | ATTAAATTATTCTTCTTTGG+GGG | + | chr2_1:68608445-68608464 | Msa0220410:three_prime_UTR | 20.0% |
| !! | AAGTGATAATATATTACAAC+CGG | - | chr2_1:68608518-68608537 | None:intergenic | 20.0% |
| !!! | ATAGCATCTTTATTTTACGT+GGG | - | chr2_1:68604490-68604509 | None:intergenic | 25.0% |
| !!! | AATAGCATCTTTATTTTACG+TGG | - | chr2_1:68604491-68604510 | None:intergenic | 25.0% |
| ! | TTGTATGAGTTTAAAAATGG+AGG | - | chr2_1:68604518-68604537 | None:intergenic | 25.0% |
| ! | TGGTAGCATATATATATAAC+AGG | + | chr2_1:68604539-68604558 | Msa0220410:five_prime_UTR | 25.0% |
| !! | AAATTAATTAAGGGATTGGT+GGG | - | chr2_1:68604653-68604672 | None:intergenic | 25.0% |
| !! | TTTGGTGCGAAATTAATTAA+GGG | - | chr2_1:68604662-68604681 | None:intergenic | 25.0% |
| ! | TCTTTCTTTAAATTCTCTCA+TGG | + | chr2_1:68604691-68604710 | Msa0220410:exon | 25.0% |
| ! | TGCTATAATCTAGTAGAAAA+AGG | + | chr2_1:68605255-68605274 | Msa0220410:intron | 25.0% |
| !! | TATTTTCTAATGACTCTGTT+CGG | - | chr2_1:68605360-68605379 | None:intergenic | 25.0% |
| ! | AGTTTGGTATAGATAGAATA+TGG | - | chr2_1:68605437-68605456 | None:intergenic | 25.0% |
| ! | TAAAGCCAAATTAAGAAACA+CGG | - | chr2_1:68605497-68605516 | None:intergenic | 25.0% |
| ! | TGTATTATAGTAAAGCAAAC+GGG | + | chr2_1:68605597-68605616 | Msa0220410:intron | 25.0% |
| ! | AAGAAGTTGAAAACTGATTA+GGG | + | chr2_1:68605666-68605685 | Msa0220410:intron | 25.0% |
| !!! | AAATCCAGTTTTAGCTAAAA+TGG | + | chr2_1:68605776-68605795 | Msa0220410:CDS | 25.0% |
| !! | AAATTATGAAGTGCTTATGT+TGG | + | chr2_1:68605868-68605887 | Msa0220410:intron | 25.0% |
| !! | CTTCATAGCACTATATATTT+TGG | - | chr2_1:68605923-68605942 | None:intergenic | 25.0% |
| ! | CAAAATATATAGTGCTATGA+AGG | + | chr2_1:68605921-68605940 | Msa0220410:intron | 25.0% |
| !!! | GTTATTTTACATCTTTGGTT+TGG | + | chr2_1:68606050-68606069 | Msa0220410:intron | 25.0% |
| !! | AGTCAAACTATTTTCATACA+AGG | - | chr2_1:68606415-68606434 | None:intergenic | 25.0% |
| !! | GTAATTTTATTGTACTGTCA+AGG | + | chr2_1:68606539-68606558 | Msa0220410:intron | 25.0% |
| ! | GAGAAAATTGATGAAAGAAA+GGG | + | chr2_1:68606622-68606641 | Msa0220410:intron | 25.0% |
| ! | AGAAAATTGATGAAAGAAAG+GGG | + | chr2_1:68606623-68606642 | Msa0220410:intron | 25.0% |
| ! | AAAAACCAAACCAGATTAAT+TGG | + | chr2_1:68607037-68607056 | Msa0220410:intron | 25.0% |
| ! | TATGAGATACTTATCCAAAA+GGG | - | chr2_1:68607105-68607124 | None:intergenic | 25.0% |
| ! | AATATAGAGAAGAGTAGAAA+AGG | + | chr2_1:68607165-68607184 | Msa0220410:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr2_1:68607399-68607418 | Msa0220410:intron | 25.0% |
| ! | AAAAACCAGACCAATTTAAT+TGG | + | chr2_1:68607591-68607610 | Msa0220410:intron | 25.0% |
| ! | AAAATCCAATTAAATTGGTC+TGG | - | chr2_1:68607599-68607618 | None:intergenic | 25.0% |
| ! | AACGCAAAATCCAATTAAAT+TGG | - | chr2_1:68607604-68607623 | None:intergenic | 25.0% |
| !! | TCTTAGTTACCTTAGAATTT+TGG | - | chr2_1:68607783-68607802 | None:intergenic | 25.0% |
| ! | TAAAACTGCGTAAAAATATG+GGG | + | chr2_1:68608045-68608064 | Msa0220410:exon | 25.0% |
| ! | ATGGGGAAAAAACTATATAT+AGG | + | chr2_1:68608062-68608081 | Msa0220410:three_prime_UTR | 25.0% |
| ! | AATTGAAGTTGAAAATTCGA+AGG | + | chr2_1:68608164-68608183 | Msa0220410:three_prime_UTR | 25.0% |
| !! | TATGTTTTACTTCTTCTTTG+AGG | + | chr2_1:68608364-68608383 | Msa0220410:three_prime_UTR | 25.0% |
| !! | ATGTTTTACTTCTTCTTTGA+GGG | + | chr2_1:68608365-68608384 | Msa0220410:three_prime_UTR | 25.0% |
| ! | TATACAGGATTGTACATAAT+AGG | - | chr2_1:68608404-68608423 | None:intergenic | 25.0% |
| ! | TTAAATTATTCTTCTTTGGG+GGG | + | chr2_1:68608446-68608465 | Msa0220410:three_prime_UTR | 25.0% |
| GGATTTCGATATACTACATA+CGG | + | chr2_1:68604368-68604387 | Msa0220410:five_prime_UTR | 30.0% | |
| TTTGATTCTACAGAGAAAGA+AGG | - | chr2_1:68604623-68604642 | None:intergenic | 30.0% | |
| GAAATTAATTAAGGGATTGG+TGG | - | chr2_1:68604654-68604673 | None:intergenic | 30.0% | |
| TGCGAAATTAATTAAGGGAT+TGG | - | chr2_1:68604657-68604676 | None:intergenic | 30.0% | |
| !! | GTTTGGTGCGAAATTAATTA+AGG | - | chr2_1:68604663-68604682 | None:intergenic | 30.0% |
| ATGATCAATTGTGAGCAATT+TGG | - | chr2_1:68605002-68605021 | None:intergenic | 30.0% | |
| TCACAATTGATCATGATTAC+TGG | + | chr2_1:68605008-68605027 | Msa0220410:CDS | 30.0% | |
| TGATTGAACTTAGCTTATAG+AGG | + | chr2_1:68605084-68605103 | Msa0220410:intron | 30.0% | |
| ! | ATTGAGTTGTTTATCCAAAG+AGG | + | chr2_1:68605395-68605414 | Msa0220410:intron | 30.0% |
| TTTGACTATAATGATCTGTC+AGG | - | chr2_1:68605521-68605540 | None:intergenic | 30.0% | |
| GTATTATAGTAAAGCAAACG+GGG | + | chr2_1:68605598-68605617 | Msa0220410:intron | 30.0% | |
| GAAGAAGTTGAAAACTGATT+AGG | + | chr2_1:68605665-68605684 | Msa0220410:intron | 30.0% | |
| TGATTAGGGTTTCATAATTC+AGG | + | chr2_1:68605680-68605699 | Msa0220410:intron | 30.0% | |
| GATTAGGGTTTCATAATTCA+GGG | + | chr2_1:68605681-68605700 | Msa0220410:intron | 30.0% | |
| !!! | ATTGCCATTTTAGCTAAAAC+TGG | - | chr2_1:68605783-68605802 | None:intergenic | 30.0% |
| TTAGCTAAAATGGCAATAAG+TGG | + | chr2_1:68605786-68605805 | Msa0220410:CDS | 30.0% | |
| !! | CTCAGGTATGTTTTTGAATT+TGG | + | chr2_1:68605838-68605857 | Msa0220410:intron | 30.0% |
| !! | TATTTAGATCAGGTCTTGTT+GGG | + | chr2_1:68605976-68605995 | Msa0220410:CDS | 30.0% |
| !! | AGGTGGTTATTTTACATCTT+TGG | + | chr2_1:68606045-68606064 | Msa0220410:intron | 30.0% |
| !!! | TACATCTTTGGTTTGGATTT+TGG | + | chr2_1:68606057-68606076 | Msa0220410:intron | 30.0% |
| !!! | GATTTTTTATCTACTGGCAT+AGG | + | chr2_1:68606346-68606365 | Msa0220410:intron | 30.0% |
| GGAGAAAATTGATGAAAGAA+AGG | + | chr2_1:68606621-68606640 | Msa0220410:intron | 30.0% | |
| TAGTTCAAACCAACAATTCA+AGG | + | chr2_1:68606662-68606681 | Msa0220410:intron | 30.0% | |
| ATTGTTCATCCTTGAATTGT+TGG | - | chr2_1:68606674-68606693 | None:intergenic | 30.0% | |
| TCTAAACAAACAATTGTCTG+TGG | - | chr2_1:68606722-68606741 | None:intergenic | 30.0% | |
| !!! | TTGGTTTTTTTCCCTAGTTT+GGG | - | chr2_1:68607026-68607045 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTTTCCCTAGTT+TGG | - | chr2_1:68607027-68607046 | None:intergenic | 30.0% |
| ACAATTCACACCAATTAATC+TGG | - | chr2_1:68607050-68607069 | None:intergenic | 30.0% | |
| !!! | TTTTAAGTTCTTTGAGTCGT+TGG | + | chr2_1:68607072-68607091 | Msa0220410:intron | 30.0% |
| GTATGAGATACTTATCCAAA+AGG | - | chr2_1:68607106-68607125 | None:intergenic | 30.0% | |
| AGAGTAGAAAAGGAAAACAA+AGG | + | chr2_1:68607175-68607194 | Msa0220410:intron | 30.0% | |
| ! | AATATTTCGCAAAGCATCAA+GGG | - | chr2_1:68607518-68607537 | None:intergenic | 30.0% |
| AAATGTTGAACAGAATGCAT+TGG | + | chr2_1:68607556-68607575 | Msa0220410:intron | 30.0% | |
| GTACTATTACTGTTAGAATG+TGG | - | chr2_1:68607896-68607915 | None:intergenic | 30.0% | |
| !!! | TTTTTACGCAGTTTTATTCC+TGG | - | chr2_1:68608041-68608060 | None:intergenic | 30.0% |
| !! | ATAGGCGGATTGTATATAAT+AGG | - | chr2_1:68608485-68608504 | None:intergenic | 30.0% |
| ! | ACAACCGGAAAGTATATAAT+AGG | - | chr2_1:68608503-68608522 | None:intergenic | 30.0% |
| ! | GGTTCTAGTTGAGAATTGAT+TGG | - | chr2_1:68604602-68604621 | None:intergenic | 35.0% |
| AATAGAAGAAGCAACTGACA+TGG | - | chr2_1:68604717-68604736 | None:intergenic | 35.0% | |
| !!! | TTTTTGGTTTGGGAAGAGAA+AGG | - | chr2_1:68604782-68604801 | None:intergenic | 35.0% |
| !!! | TATGATACGACGTCGTTTTT+TGG | - | chr2_1:68604798-68604817 | None:intergenic | 35.0% |
| ATCTCATATTCACACCTCTT+TGG | - | chr2_1:68605412-68605431 | None:intergenic | 35.0% | |
| AATATGTGCCTGAACACAAT+TGG | + | chr2_1:68605727-68605746 | Msa0220410:CDS | 35.0% | |
| TTGTCTACTCAATTGGAGAT+TGG | + | chr2_1:68605811-68605830 | Msa0220410:CDS | 35.0% | |
| ! | ATGAAGTGCTTATGTTGGAT+AGG | + | chr2_1:68605873-68605892 | Msa0220410:intron | 35.0% |
| ! | TGAAGTGCTTATGTTGGATA+GGG | + | chr2_1:68605874-68605893 | Msa0220410:intron | 35.0% |
| GCTCGATCAAACTCAAAAAT+AGG | - | chr2_1:68605951-68605970 | None:intergenic | 35.0% | |
| ! | CTATTTAGATCAGGTCTTGT+TGG | + | chr2_1:68605975-68605994 | Msa0220410:CDS | 35.0% |
| AATAGTGAGAAAGAGATCCA+TGG | - | chr2_1:68606010-68606029 | None:intergenic | 35.0% | |
| ! | CTCTTTTTCCTTTCCAACAA+TGG | + | chr2_1:68606136-68606155 | Msa0220410:CDS | 35.0% |
| ! | TTTTTCCTTTCCAACAATGG+TGG | + | chr2_1:68606139-68606158 | Msa0220410:CDS | 35.0% |
| ! | TTTTCCTTTCCAACAATGGT+GGG | + | chr2_1:68606140-68606159 | Msa0220410:CDS | 35.0% |
| ! | ACCATCTACTTTGTGGTTTT+GGG | + | chr2_1:68606216-68606235 | Msa0220410:intron | 35.0% |
| GACTCTTTGGATAACATCTA+TGG | + | chr2_1:68606252-68606271 | Msa0220410:intron | 35.0% | |
| TAAGTTCTTACAGTGAGCAT+GGG | - | chr2_1:68606300-68606319 | None:intergenic | 35.0% | |
| ATAAGTTCTTACAGTGAGCA+TGG | - | chr2_1:68606301-68606320 | None:intergenic | 35.0% | |
| ATTACAGCATGTGAACAAAG+AGG | - | chr2_1:68606524-68606543 | None:intergenic | 35.0% | |
| TTCACTCTAATATGCTTCAC+AGG | + | chr2_1:68606770-68606789 | Msa0220410:intron | 35.0% | |
| CACACCATAAGTAATCAGAT+GGG | - | chr2_1:68606820-68606839 | None:intergenic | 35.0% | |
| TCACACCAATTAATCTGGTT+TGG | - | chr2_1:68607045-68607064 | None:intergenic | 35.0% | |
| GAAAAGGAAAACAAAGGAGA+AGG | + | chr2_1:68607181-68607200 | Msa0220410:intron | 35.0% | |
| TTCATTATTGTAGCCGATTG+CGG | - | chr2_1:68607229-68607248 | None:intergenic | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | - | chr2_1:68607286-68607305 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | - | chr2_1:68607287-68607306 | None:intergenic | 35.0% | |
| ! | CAATATTTCGCAAAGCATCA+AGG | - | chr2_1:68607519-68607538 | None:intergenic | 35.0% |
| GCGAAATATTGAGAGTTTGT+CGG | + | chr2_1:68607528-68607547 | Msa0220410:intron | 35.0% | |
| TACACCAAGCCAAAATTCTA+AGG | + | chr2_1:68607771-68607790 | Msa0220410:CDS | 35.0% | |
| !!! | GTTACCTTAGAATTTTGGCT+TGG | - | chr2_1:68607778-68607797 | None:intergenic | 35.0% |
| ATTTCGTGATAAGTTTCACG+AGG | - | chr2_1:68607852-68607871 | None:intergenic | 35.0% | |
| ! | AGTCATCAAATGCTTTTGCA+AGG | - | chr2_1:68608121-68608140 | None:intergenic | 35.0% |
| TGACTCAGCTTAAAATTCGA+AGG | + | chr2_1:68608136-68608155 | Msa0220410:three_prime_UTR | 35.0% | |
| AGGATCTCAATTGAAGTTGA+AGG | + | chr2_1:68608156-68608175 | Msa0220410:three_prime_UTR | 35.0% | |
| !! | TATACTTGTTGTGCATCCTT+TGG | + | chr2_1:68608256-68608275 | Msa0220410:three_prime_UTR | 35.0% |
| ACAGGATTGTACATAATAGG+CGG | - | chr2_1:68608401-68608420 | None:intergenic | 35.0% | |
| GCATCGTATGTTCTTTATAC+AGG | - | chr2_1:68608419-68608438 | None:intergenic | 35.0% | |
| GTATAAAGAACATACGATGC+TGG | + | chr2_1:68608419-68608438 | Msa0220410:three_prime_UTR | 35.0% | |
| TCCGCCTATTATATACTTTC+CGG | + | chr2_1:68608496-68608515 | Msa0220410:three_prime_UTR | 35.0% | |
| ! | ACCGGAAAGTATATAATAGG+CGG | - | chr2_1:68608500-68608519 | None:intergenic | 35.0% |
| !!! | ACGACGTCGTTTTTTGGTTT+GGG | - | chr2_1:68604792-68604811 | None:intergenic | 40.0% |
| !!! | TACGACGTCGTTTTTTGGTT+TGG | - | chr2_1:68604793-68604812 | None:intergenic | 40.0% |
| AAAAGACAGAAAAGTCCTCG+AGG | + | chr2_1:68604862-68604881 | Msa0220410:CDS | 40.0% | |
| ACTGACACTGATATTCTCAC+CGG | + | chr2_1:68604926-68604945 | Msa0220410:CDS | 40.0% | |
| ! | AAGAACGATTGCAGCATTGA+TGG | - | chr2_1:68604957-68604976 | None:intergenic | 40.0% |
| ATCAATGCTGCAATCGTTCT+TGG | + | chr2_1:68604956-68604975 | Msa0220410:CDS | 40.0% | |
| CGTTGCCGTGTTTCTTAATT+TGG | + | chr2_1:68605489-68605508 | Msa0220410:intron | 40.0% | |
| TTATAGTAAAGCAAACGGGG+AGG | + | chr2_1:68605601-68605620 | Msa0220410:intron | 40.0% | |
| AGGGTTTCATAATTCAGGGT+TGG | + | chr2_1:68605685-68605704 | Msa0220410:intron | 40.0% | |
| TAGGCAATCCAATTGTGTTC+AGG | - | chr2_1:68605738-68605757 | None:intergenic | 40.0% | |
| TGCTTTCAGAGATTGCTCAT+AGG | - | chr2_1:68605757-68605776 | None:intergenic | 40.0% | |
| AGTGGAGTTGTCTACTCAAT+TGG | + | chr2_1:68605804-68605823 | Msa0220410:CDS | 40.0% | |
| AATTGGAGATTGGATTGCTC+AGG | + | chr2_1:68605821-68605840 | Msa0220410:CDS | 40.0% | |
| !!! | TTTTTGAGTTTGATCGAGCG+CGG | + | chr2_1:68605952-68605971 | Msa0220410:CDS | 40.0% |
| CTATTACTACCAACTGTGTG+AGG | + | chr2_1:68606025-68606044 | Msa0220410:CDS | 40.0% | |
| AAATAACCACCTCACACAGT+TGG | - | chr2_1:68606037-68606056 | None:intergenic | 40.0% | |
| TTGTTTGCGTTGTGTAACAC+AGG | + | chr2_1:68606113-68606132 | Msa0220410:intron | 40.0% | |
| GGTCAAAAGCAACTTTAGCA+GGG | - | chr2_1:68606170-68606189 | None:intergenic | 40.0% | |
| TGGTCAAAAGCAACTTTAGC+AGG | - | chr2_1:68606171-68606190 | None:intergenic | 40.0% | |
| !! | TTGCTTTTGACCAAACTGTG+TGG | + | chr2_1:68606178-68606197 | Msa0220410:CDS | 40.0% |
| AAATAGCTGACCACACAGTT+TGG | - | chr2_1:68606191-68606210 | None:intergenic | 40.0% | |
| AAACTGTGTGGTCAGCTATT+TGG | + | chr2_1:68606190-68606209 | Msa0220410:CDS | 40.0% | |
| TTGGAACACCATCTACTTTG+TGG | + | chr2_1:68606209-68606228 | Msa0220410:CDS | 40.0% | |
| ! | CACCATCTACTTTGTGGTTT+TGG | + | chr2_1:68606215-68606234 | Msa0220410:intron | 40.0% |
| ACCCAAAACCACAAAGTAGA+TGG | - | chr2_1:68606220-68606239 | None:intergenic | 40.0% | |
| TTTGTTGCGTTTCGACTCTT+TGG | + | chr2_1:68606239-68606258 | Msa0220410:intron | 40.0% | |
| TAAGTAATCAGATGGGCGAA+AGG | - | chr2_1:68606813-68606832 | None:intergenic | 40.0% | |
| TTCGCCCATCTGATTACTTA+TGG | + | chr2_1:68606813-68606832 | Msa0220410:CDS | 40.0% | |
| CCACACCATAAGTAATCAGA+TGG | - | chr2_1:68606821-68606840 | None:intergenic | 40.0% | |
| CCATCTGATTACTTATGGTG+TGG | + | chr2_1:68606818-68606837 | Msa0220410:CDS | 40.0% | |
| TGTGGAACAAAGGCTTCTTT+GGG | + | chr2_1:68606845-68606864 | Msa0220410:CDS | 40.0% | |
| GAGTTCAATAAGACCGCAAT+CGG | + | chr2_1:68607213-68607232 | Msa0220410:intron | 40.0% | |
| GAGTAAGTATATACTCCCTC+TGG | + | chr2_1:68607268-68607287 | Msa0220410:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr2_1:68607402-68607421 | Msa0220410:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr2_1:68607403-68607422 | Msa0220410:intron | 40.0% | |
| ATCAGAATCCCGAAAATCTG+AGG | + | chr2_1:68607723-68607742 | Msa0220410:CDS | 40.0% | |
| ! | TGACACTTCCTCAGATTTTC+GGG | - | chr2_1:68607734-68607753 | None:intergenic | 40.0% |
| ! | CTGACACTTCCTCAGATTTT+CGG | - | chr2_1:68607735-68607754 | None:intergenic | 40.0% |
| TCTATATGTTGTGTACTGCC+AGG | + | chr2_1:68608020-68608039 | Msa0220410:intron | 40.0% | |
| !! | GGCGGATTGTATATAATAGG+CGG | - | chr2_1:68608482-68608501 | None:intergenic | 40.0% |
| TCTCAACTGGAAGAGAAGAG+GGG | - | chr2_1:68604456-68604475 | None:intergenic | 45.0% | |
| CTCTCAACTGGAAGAGAAGA+GGG | - | chr2_1:68604457-68604476 | None:intergenic | 45.0% | |
| ACTCTCAACTGGAAGAGAAG+AGG | - | chr2_1:68604458-68604477 | None:intergenic | 45.0% | |
| AAAGGAGGTAAGGAGATGTG+GGG | - | chr2_1:68604764-68604783 | None:intergenic | 45.0% | |
| GAAAGGAGGTAAGGAGATGT+GGG | - | chr2_1:68604765-68604784 | None:intergenic | 45.0% | |
| AGAAAGGAGGTAAGGAGATG+TGG | - | chr2_1:68604766-68604785 | None:intergenic | 45.0% | |
| TTGGGAAGAGAAAGGAGGTA+AGG | - | chr2_1:68604774-68604793 | None:intergenic | 45.0% | |
| !! | TTGGTTTGGGAAGAGAAAGG+AGG | - | chr2_1:68604779-68604798 | None:intergenic | 45.0% |
| CATAATCAGCTCCGTTACAG+AGG | + | chr2_1:68604814-68604833 | Msa0220410:CDS | 45.0% | |
| TGCTTCACGATCCTCTGTAA+CGG | - | chr2_1:68604828-68604847 | None:intergenic | 45.0% | |
| GTTTCTTCTTCGCCTTCCAA+GGG | + | chr2_1:68604887-68604906 | Msa0220410:CDS | 45.0% | |
| GCTGCAATCGTTCTTGGATT+TGG | + | chr2_1:68604962-68604981 | Msa0220410:CDS | 45.0% | |
| CTTGTTGGGTTTACTCTCCA+TGG | + | chr2_1:68605990-68606009 | Msa0220410:CDS | 45.0% | |
| TTACTACCAACTGTGTGAGG+TGG | + | chr2_1:68606028-68606047 | Msa0220410:intron | 45.0% | |
| ACAACCCACCATTGTTGGAA+AGG | - | chr2_1:68606147-68606166 | None:intergenic | 45.0% | |
| ATGAAAGAAAGGGGTCAGAG+AGG | + | chr2_1:68606632-68606651 | Msa0220410:intron | 45.0% | |
| CTCTAATATGCTTCACAGGC+AGG | + | chr2_1:68606774-68606793 | Msa0220410:intron | 45.0% | |
| TACTTATGGTGTGGTTCCTG+TGG | + | chr2_1:68606827-68606846 | Msa0220410:CDS | 45.0% | |
| CAAAGAAGCCTTTGTTCCAC+AGG | - | chr2_1:68606846-68606865 | None:intergenic | 45.0% | |
| CTGTGGAACAAAGGCTTCTT+TGG | + | chr2_1:68606844-68606863 | Msa0220410:CDS | 45.0% | |
| TGGACTGTATTGAGCTCATC+TGG | + | chr2_1:68606868-68606887 | Msa0220410:CDS | 45.0% | |
| GGACTGTATTGAGCTCATCT+GGG | + | chr2_1:68606869-68606888 | Msa0220410:CDS | 45.0% | |
| TCCGCTCAATGTTTCAGTGT+GGG | - | chr2_1:68606993-68607012 | None:intergenic | 45.0% | |
| TTCCGCTCAATGTTTCAGTG+TGG | - | chr2_1:68606994-68607013 | None:intergenic | 45.0% | |
| AAACATTGAGCGGAATGCGT+TGG | + | chr2_1:68606999-68607018 | Msa0220410:intron | 45.0% | |
| AATGCGTTGGACCCAAACTA+GGG | + | chr2_1:68607012-68607031 | Msa0220410:intron | 45.0% | |
| !!! | TCGTTGGTTCAATGCCCTTT+TGG | + | chr2_1:68607088-68607107 | Msa0220410:intron | 45.0% |
| TGCTTATTGTGTACTCCCTC+CGG | - | chr2_1:68607421-68607440 | None:intergenic | 45.0% | |
| ! | AAAGCATCAAGGGTTTGAGG+GGG | - | chr2_1:68607508-68607527 | None:intergenic | 45.0% |
| ! | CAAAGCATCAAGGGTTTGAG+GGG | - | chr2_1:68607509-68607528 | None:intergenic | 45.0% |
| ! | GCAAAGCATCAAGGGTTTGA+GGG | - | chr2_1:68607510-68607529 | None:intergenic | 45.0% |
| !! | GAGGAAGTGTCAGAAACAAC+AGG | + | chr2_1:68607742-68607761 | Msa0220410:CDS | 45.0% |
| TAAGTTTCACGAGGACTCTC+TGG | - | chr2_1:68607843-68607862 | None:intergenic | 45.0% | |
| !! | ACTTGTTGTGCATCCTTTGG+CGG | + | chr2_1:68608259-68608278 | Msa0220410:three_prime_UTR | 45.0% |
| GAATAATTCGTCACCGCCAA+AGG | - | chr2_1:68608275-68608294 | None:intergenic | 45.0% | |
| TTGGCGGTGACGAATTATTC+AGG | + | chr2_1:68608275-68608294 | Msa0220410:three_prime_UTR | 45.0% | |
| TCAACTGGAAGAGAAGAGGG+GGG | - | chr2_1:68604454-68604473 | None:intergenic | 50.0% | |
| CTCAACTGGAAGAGAAGAGG+GGG | - | chr2_1:68604455-68604474 | None:intergenic | 50.0% | |
| GGAACTCTGTCACTCTCAAC+TGG | - | chr2_1:68604469-68604488 | None:intergenic | 50.0% | |
| !! | GAGATGTGGGGCTTTGAGAA+GGG | - | chr2_1:68604752-68604771 | None:intergenic | 50.0% |
| AGAGGATCGTGAAGCAGCTT+CGG | + | chr2_1:68604832-68604851 | Msa0220410:CDS | 50.0% | |
| AGACAGAAAAGTCCTCGAGG+AGG | + | chr2_1:68604865-68604884 | Msa0220410:CDS | 50.0% | |
| GGTTTCTTCTTCGCCTTCCA+AGG | + | chr2_1:68604886-68604905 | Msa0220410:CDS | 50.0% | |
| ACCTCTGTGATACCCTTGGA+AGG | - | chr2_1:68604902-68604921 | None:intergenic | 50.0% | |
| AGCAACCTCTGTGATACCCT+TGG | - | chr2_1:68604906-68604925 | None:intergenic | 50.0% | |
| AGTAAAGCAAACGGGGAGGA+TGG | + | chr2_1:68605605-68605624 | Msa0220410:intron | 50.0% | |
| TAGGCACTTGCGAGACTCTT+TGG | + | chr2_1:68606365-68606384 | Msa0220410:intron | 50.0% | |
| AATATGCTTCACAGGCAGGC+TGG | + | chr2_1:68606778-68606797 | Msa0220410:intron | 50.0% | |
| GTGTGGTTCCTGTGGAACAA+AGG | + | chr2_1:68606835-68606854 | Msa0220410:CDS | 50.0% | |
| GGAACAAAGGCTTCTTTGGG+TGG | + | chr2_1:68606848-68606867 | Msa0220410:CDS | 50.0% | |
| GCCCACACTGAAACATTGAG+CGG | + | chr2_1:68606989-68607008 | Msa0220410:intron | 50.0% | |
| GAATGCGTTGGACCCAAACT+AGG | + | chr2_1:68607011-68607030 | Msa0220410:intron | 50.0% | |
| ! | CGCAAAGCATCAAGGGTTTG+AGG | - | chr2_1:68607511-68607530 | None:intergenic | 50.0% |
| !! | TTGCGGTGCTGTGCTGGAAA+TGG | - | chr2_1:68604425-68604444 | None:intergenic | 55.0% |
| !! | GGGCTTTGAGAAGGGAAGGA+GGG | - | chr2_1:68604744-68604763 | None:intergenic | 55.0% |
| !! | TGTGGGGCTTTGAGAAGGGA+AGG | - | chr2_1:68604748-68604767 | None:intergenic | 55.0% |
| !! | GGAGATGTGGGGCTTTGAGA+AGG | - | chr2_1:68604753-68604772 | None:intergenic | 55.0% |
| GCGAAGAAGAAACCTCCTCG+AGG | - | chr2_1:68604880-68604899 | None:intergenic | 55.0% | |
| !! | GCCTTCCAAGGGTATCACAG+AGG | + | chr2_1:68604898-68604917 | Msa0220410:CDS | 55.0% |
| !! | TGCAGCATTGATGGCACGTC+CGG | - | chr2_1:68604948-68604967 | None:intergenic | 55.0% |
| CGAGCGCGGCTATTTAGATC+AGG | + | chr2_1:68605966-68605985 | Msa0220410:CDS | 55.0% | |
| CAGGGACAACCCACCATTGT+TGG | - | chr2_1:68606152-68606171 | None:intergenic | 55.0% | |
| TGGAAGAGAAGAGGGGGGTG+CGG | - | chr2_1:68604449-68604468 | None:intergenic | 60.0% | |
| !! | GGGGCTTTGAGAAGGGAAGG+AGG | - | chr2_1:68604745-68604764 | None:intergenic | 60.0% |
| CACAGGCAGGCTGGAAGCTT+TGG | + | chr2_1:68606787-68606806 | Msa0220410:intron | 60.0% | |
| !! | TGCGGATTGCGGTGCTGTGC+TGG | - | chr2_1:68604431-68604450 | None:intergenic | 65.0% |
| ! | GAAGAGGGGGGTGCGGATTG+CGG | - | chr2_1:68604442-68604461 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 68604351 | 68608546 | 68604351 | ID=Msa0220410;Name=Msa0220410 |
| chr2_1 | mRNA | 68604351 | 68608546 | 68604351 | ID=Msa0220410-mRNA-1;Parent=Msa0220410;Name=Msa0220410-mRNA-1;_AED=0.13;_eAED=0.13;_QI=359|0.83|0.85|1|0.66|0.71|7|499|293 |
| chr2_1 | exon | 68604351 | 68605033 | 68604351 | ID=Msa0220410-mRNA-1:exon:19447;Parent=Msa0220410-mRNA-1 |
| chr2_1 | exon | 68605702 | 68605842 | 68605702 | ID=Msa0220410-mRNA-1:exon:19448;Parent=Msa0220410-mRNA-1 |
| chr2_1 | exon | 68605933 | 68606046 | 68605933 | ID=Msa0220410-mRNA-1:exon:19449;Parent=Msa0220410-mRNA-1 |
| chr2_1 | exon | 68606135 | 68606230 | 68606135 | ID=Msa0220410-mRNA-1:exon:19450;Parent=Msa0220410-mRNA-1 |
| chr2_1 | exon | 68606792 | 68606907 | 68606792 | ID=Msa0220410-mRNA-1:exon:19451;Parent=Msa0220410-mRNA-1 |
| chr2_1 | exon | 68607708 | 68607792 | 68607708 | ID=Msa0220410-mRNA-1:exon:19452;Parent=Msa0220410-mRNA-1 |
| chr2_1 | exon | 68608042 | 68608546 | 68608042 | ID=Msa0220410-mRNA-1:exon:19453;Parent=Msa0220410-mRNA-1 |
| chr2_1 | five_prime_UTR | 68604351 | 68604709 | 68604351 | ID=Msa0220410-mRNA-1:five_prime_utr;Parent=Msa0220410-mRNA-1 |
| chr2_1 | CDS | 68604710 | 68605033 | 68604710 | ID=Msa0220410-mRNA-1:cds;Parent=Msa0220410-mRNA-1 |
| chr2_1 | CDS | 68605702 | 68605842 | 68605702 | ID=Msa0220410-mRNA-1:cds;Parent=Msa0220410-mRNA-1 |
| chr2_1 | CDS | 68605933 | 68606046 | 68605933 | ID=Msa0220410-mRNA-1:cds;Parent=Msa0220410-mRNA-1 |
| chr2_1 | CDS | 68606135 | 68606230 | 68606135 | ID=Msa0220410-mRNA-1:cds;Parent=Msa0220410-mRNA-1 |
| chr2_1 | CDS | 68606792 | 68606907 | 68606792 | ID=Msa0220410-mRNA-1:cds;Parent=Msa0220410-mRNA-1 |
| chr2_1 | CDS | 68607708 | 68607792 | 68607708 | ID=Msa0220410-mRNA-1:cds;Parent=Msa0220410-mRNA-1 |
| chr2_1 | CDS | 68608042 | 68608047 | 68608042 | ID=Msa0220410-mRNA-1:cds;Parent=Msa0220410-mRNA-1 |
| chr2_1 | three_prime_UTR | 68608048 | 68608546 | 68608048 | ID=Msa0220410-mRNA-1:three_prime_utr;Parent=Msa0220410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
