Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704780 | XP_039685180.1 | 90.452 | 199 | 13 | 2 | 1 | 198 | 1 | 194 | 3.86e-124 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704780 | sp|Q9SJ02|STEP2_ARATH | 56.566 | 198 | 74 | 5 | 1 | 192 | 1 | 192 | 6.24e-62 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704780 | A0A396GPG0 | 90.452 | 199 | 13 | 2 | 1 | 198 | 1 | 194 | 1.84e-124 | 358 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0704780 | -0.816661 | 4.929273e-52 | -8.615850e-47 |
| Msa0034700 | Msa0704780 | 0.808433 | 3.104962e-50 | -8.615850e-47 |
| Msa0040090 | Msa0704780 | 0.847617 | 1.032614e-59 | -8.615850e-47 |
| Msa0041780 | Msa0704780 | 0.817749 | 2.805962e-52 | -8.615850e-47 |
| Msa0044530 | Msa0704780 | 0.844715 | 6.366316e-59 | -8.615850e-47 |
| Msa0044780 | Msa0704780 | 0.853594 | 2.154746e-61 | -8.615850e-47 |
| Msa0045620 | Msa0704780 | -0.854671 | 1.054116e-61 | -8.615850e-47 |
| Msa0050320 | Msa0704780 | 0.831934 | 1.259330e-55 | -8.615850e-47 |
| Msa0050530 | Msa0704780 | -0.805608 | 1.229509e-49 | -8.615850e-47 |
| Msa0063190 | Msa0704780 | -0.812267 | 4.619365e-51 | -8.615850e-47 |
| Msa0085580 | Msa0704780 | 0.847811 | 9.130645e-60 | -8.615850e-47 |
| Msa0086620 | Msa0704780 | 0.806953 | 6.403602e-50 | -8.615850e-47 |
| Msa0087580 | Msa0704780 | 0.817615 | 3.007782e-52 | -8.615850e-47 |
| Msa0087780 | Msa0704780 | 0.839643 | 1.401489e-57 | -8.615850e-47 |
| Msa0087790 | Msa0704780 | 0.815511 | 8.904135e-52 | -8.615850e-47 |
| Msa0089540 | Msa0704780 | -0.818118 | 2.315895e-52 | -8.615850e-47 |
| Msa0091090 | Msa0704780 | 0.823088 | 1.672040e-53 | -8.615850e-47 |
| Msa0091220 | Msa0704780 | 0.848453 | 6.069554e-60 | -8.615850e-47 |
| Msa0091240 | Msa0704780 | 0.844699 | 6.431312e-59 | -8.615850e-47 |
| Msa0094180 | Msa0704780 | -0.812296 | 4.553233e-51 | -8.615850e-47 |
| Msa0096020 | Msa0704780 | 0.825961 | 3.522461e-54 | -8.615850e-47 |
| Msa0096570 | Msa0704780 | 0.817408 | 3.349787e-52 | -8.615850e-47 |
| Msa0100890 | Msa0704780 | -0.812193 | 4.795051e-51 | -8.615850e-47 |
| Msa0604640 | Msa0704780 | 0.827515 | 1.499425e-54 | -8.615850e-47 |
| Msa0608940 | Msa0704780 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0618770 | Msa0704780 | 0.806200 | 9.233680e-50 | -8.615850e-47 |
| Msa0619320 | Msa0704780 | 0.948862 | 4.052812e-107 | -8.615850e-47 |
| Msa0621780 | Msa0704780 | 0.849492 | 3.122830e-60 | -8.615850e-47 |
| Msa0623310 | Msa0704780 | -0.847201 | 1.343539e-59 | -8.615850e-47 |
| Msa0623360 | Msa0704780 | 0.801322 | 9.510492e-49 | -8.615850e-47 |
| Msa0630850 | Msa0704780 | 0.859122 | 5.144482e-63 | -8.615850e-47 |
| Msa0659020 | Msa0704780 | 0.834480 | 2.925904e-56 | -8.615850e-47 |
| Msa0661480 | Msa0704780 | -0.816875 | 4.413502e-52 | -8.615850e-47 |
| Msa0663290 | Msa0704780 | -0.833886 | 4.122322e-56 | -8.615850e-47 |
| Msa0664070 | Msa0704780 | -0.826364 | 2.824726e-54 | -8.615850e-47 |
| Msa0673940 | Msa0704780 | -0.802541 | 5.341491e-49 | -8.615850e-47 |
| Msa0680450 | Msa0704780 | -0.802399 | 5.715498e-49 | -8.615850e-47 |
| Msa0681880 | Msa0704780 | 0.856021 | 4.261690e-62 | -8.615850e-47 |
| Msa0685390 | Msa0704780 | 0.853798 | 1.882429e-61 | -8.615850e-47 |
| Msa0685610 | Msa0704780 | -0.822453 | 2.349750e-53 | -8.615850e-47 |
| Msa0704780 | Msa0705050 | 0.854968 | 8.639652e-62 | -8.615850e-47 |
| Msa0704780 | Msa0705810 | 0.809757 | 1.616135e-50 | -8.615850e-47 |
| Msa0704780 | Msa0708020 | -0.814274 | 1.674801e-51 | -8.615850e-47 |
| Msa0704780 | Msa0708980 | -0.813044 | 3.124184e-51 | -8.615850e-47 |
| Msa0704780 | Msa0714060 | 0.809877 | 1.522394e-50 | -8.615850e-47 |
| Msa0704780 | Msa0714200 | 0.810041 | 1.403973e-50 | -8.615850e-47 |
| Msa0704780 | Msa0715510 | -0.815561 | 8.678265e-52 | -8.615850e-47 |
| Msa0704780 | Msa0726520 | -0.816080 | 6.649752e-52 | -8.615850e-47 |
| Msa0704780 | Msa0732970 | -0.814225 | 1.716934e-51 | -8.615850e-47 |
| Msa0704780 | Msa0733240 | 0.800387 | 1.475811e-48 | -8.615850e-47 |
| Msa0704780 | Msa0742090 | 0.803240 | 3.831526e-49 | -8.615850e-47 |
| Msa0704780 | Msa0756440 | 0.823126 | 1.638445e-53 | -8.615850e-47 |
| Msa0704780 | Msa0766860 | -0.823540 | 1.310858e-53 | -8.615850e-47 |
| Msa0704780 | Msa0771910 | -0.822626 | 2.141730e-53 | -8.615850e-47 |
| Msa0704780 | Msa0773960 | -0.806886 | 6.615157e-50 | -8.615850e-47 |
| Msa0704780 | Msa0775420 | 0.802701 | 4.951867e-49 | -8.615850e-47 |
| Msa0704780 | Msa0776590 | 0.831526 | 1.587818e-55 | -8.615850e-47 |
| Msa0704780 | Msa0795710 | 0.848172 | 7.259187e-60 | -8.615850e-47 |
| Msa0704780 | Msa0812800 | 0.806825 | 6.814463e-50 | -8.615850e-47 |
| Msa0704780 | Msa0813630 | 0.809457 | 1.874650e-50 | -8.615850e-47 |
| Msa0704780 | Msa0831820 | -0.809537 | 1.801776e-50 | -8.615850e-47 |
| Msa0704780 | Msa0833450 | 0.840663 | 7.592077e-58 | -8.615850e-47 |
| Msa0704780 | Msa0834200 | 0.859535 | 3.866813e-63 | -8.615850e-47 |
| Msa0704780 | Msa0834240 | 0.832603 | 8.602918e-56 | -8.615850e-47 |
| Msa0704780 | Msa0835550 | 0.817129 | 3.869357e-52 | -8.615850e-47 |
| Msa0704780 | Msa0840520 | -0.803588 | 3.245643e-49 | -8.615850e-47 |
| Msa0704780 | Msa0846900 | -0.825038 | 5.829677e-54 | -8.615850e-47 |
| Msa0704780 | Msa0850600 | -0.801982 | 6.963425e-49 | -8.615850e-47 |
| Msa0704780 | Msa0853150 | 0.803681 | 3.104215e-49 | -8.615850e-47 |
| Msa0704780 | Msa0861480 | 0.805977 | 1.028699e-49 | -8.615850e-47 |
| Msa0704780 | Msa0866510 | 0.808735 | 2.676135e-50 | -8.615850e-47 |
| Msa0704780 | Msa0899730 | 0.803769 | 2.976135e-49 | -8.615850e-47 |
| Msa0704780 | Msa0927190 | 0.806767 | 7.008833e-50 | -8.615850e-47 |
| Msa0704780 | Msa0930950 | 0.850497 | 1.634334e-60 | -8.615850e-47 |
| Msa0704780 | Msa0975550 | 0.805629 | 1.217389e-49 | -8.615850e-47 |
| Msa0704780 | Msa0978980 | -0.811944 | 5.433344e-51 | -8.615850e-47 |
| Msa0704780 | Msa0982960 | -0.812386 | 4.351309e-51 | -8.615850e-47 |
| Msa0704780 | Msa0999480 | 0.817285 | 3.569173e-52 | -8.615850e-47 |
| Msa0704780 | Msa0999590 | 0.817423 | 3.323639e-52 | -8.615850e-47 |
| Msa0704780 | Msa1026710 | -0.814092 | 1.837496e-51 | -8.615850e-47 |
| Msa0704780 | Msa1033420 | -0.800314 | 1.527229e-48 | -8.615850e-47 |
| Msa0704780 | Msa1036020 | -0.805462 | 1.319654e-49 | -8.615850e-47 |
| Msa0704780 | Msa1057620 | 0.834407 | 3.052124e-56 | -8.615850e-47 |
| Msa0704780 | Msa1078590 | 0.807231 | 5.591193e-50 | -8.615850e-47 |
| Msa0704780 | Msa1083630 | -0.804102 | 2.538023e-49 | -8.615850e-47 |
| Msa0704780 | Msa1085570 | 0.830747 | 2.467841e-55 | -8.615850e-47 |
| Msa0704780 | Msa1088740 | 0.822592 | 2.181823e-53 | -8.615850e-47 |
| Msa0704780 | Msa1093190 | 0.803512 | 3.365209e-49 | -8.615850e-47 |
| Msa0704780 | Msa1101610 | 0.874239 | 7.885929e-68 | -8.615850e-47 |
| Msa0704780 | Msa1101980 | 0.812236 | 4.691822e-51 | -8.615850e-47 |
| Msa0704780 | Msa1127200 | -0.834350 | 3.153777e-56 | -8.615850e-47 |
| Msa0704780 | Msa1129660 | 0.814118 | 1.812964e-51 | -8.615850e-47 |
| Msa0704780 | Msa1133440 | 0.865925 | 4.146826e-65 | -8.615850e-47 |
| Msa0704780 | Msa1134770 | -0.812470 | 4.170955e-51 | -8.615850e-47 |
| Msa0704780 | Msa1150860 | -0.800546 | 1.370172e-48 | -8.615850e-47 |
| Msa0704780 | Msa1154630 | -0.808367 | 3.206424e-50 | -8.615850e-47 |
| Msa0704780 | Msa1165460 | -0.800687 | 1.282299e-48 | -8.615850e-47 |
| Msa0704780 | Msa1169590 | 0.806500 | 7.983573e-50 | -8.615850e-47 |
| Msa0704780 | Msa1180840 | -0.811975 | 5.351028e-51 | -8.615850e-47 |
| Msa0704780 | Msa1183910 | -0.807805 | 4.223523e-50 | -8.615850e-47 |
| Msa0704780 | Msa1190350 | 0.819087 | 1.396444e-52 | -8.615850e-47 |
| Msa0704780 | Msa1199580 | 0.858015 | 1.100723e-62 | -8.615850e-47 |
| Msa0704780 | Msa1206040 | -0.813514 | 2.462433e-51 | -8.615850e-47 |
| Msa0704780 | Msa1211260 | 0.828351 | 9.433313e-55 | -8.615850e-47 |
| Msa0704780 | Msa1211300 | 0.804500 | 2.097109e-49 | -8.615850e-47 |
| Msa0704780 | Msa1220580 | -0.817449 | 3.278365e-52 | -8.615850e-47 |
| Msa0704780 | Msa1231440 | -0.812652 | 3.807268e-51 | -8.615850e-47 |
| Msa0704780 | Msa1240060 | -0.835905 | 1.277823e-56 | -8.615850e-47 |
| Msa0704780 | Msa1242990 | 0.811633 | 6.350505e-51 | -8.615850e-47 |
| Msa0704780 | Msa1243630 | 0.837538 | 4.901108e-57 | -8.615850e-47 |
| Msa0704780 | Msa1244220 | 0.833031 | 6.734094e-56 | -8.615850e-47 |
| Msa0704780 | Msa1253270 | -0.802210 | 6.251026e-49 | -8.615850e-47 |
| Msa0704780 | Msa1255710 | -0.810418 | 1.164262e-50 | -8.615850e-47 |
| Msa0704780 | Msa1263610 | 0.803083 | 4.129390e-49 | -8.615850e-47 |
| Msa0704780 | Msa1266120 | 0.808507 | 2.993635e-50 | -8.615850e-47 |
| Msa0704780 | Msa1273320 | -0.809248 | 2.077930e-50 | -8.615850e-47 |
| Msa0704780 | Msa1278000 | -0.804821 | 1.797418e-49 | -8.615850e-47 |
| Msa0704780 | Msa1278030 | -0.802625 | 5.132535e-49 | -8.615850e-47 |
| Msa0704780 | Msa1281370 | -0.817765 | 2.782192e-52 | -8.615850e-47 |
| Msa0704780 | Msa1286860 | 0.812337 | 4.461450e-51 | -8.615850e-47 |
| Msa0704780 | Msa1288970 | 0.806395 | 8.399286e-50 | -8.615850e-47 |
| Msa0704780 | Msa1295210 | 0.811890 | 5.582014e-51 | -8.615850e-47 |
| Msa0704780 | Msa1297070 | -0.817282 | 3.574533e-52 | -8.615850e-47 |
| Msa0704780 | Msa1298980 | 0.800482 | 1.412035e-48 | -8.615850e-47 |
| Msa0704780 | Msa1306700 | 0.811262 | 7.646374e-51 | -8.615850e-47 |
| Msa0704780 | Msa1317240 | 0.813353 | 2.671809e-51 | -8.615850e-47 |
| Msa0704780 | Msa1320530 | -0.829278 | 5.629005e-55 | -8.615850e-47 |
| Msa0704780 | Msa1328630 | 0.857904 | 1.187395e-62 | -8.615850e-47 |
| Msa0704780 | Msa1328720 | 0.860657 | 1.772288e-63 | -8.615850e-47 |
| Msa0704780 | Msa1328870 | -0.809878 | 1.521681e-50 | -8.615850e-47 |
| Msa0704780 | Msa1332690 | 0.800717 | 1.264057e-48 | -8.615850e-47 |
| Msa0704780 | Msa1334560 | -0.826475 | 2.658919e-54 | -8.615850e-47 |
| Msa0704780 | Msa1342400 | 0.836422 | 9.447229e-57 | -8.615850e-47 |
| Msa0704780 | Msa1343450 | 0.800919 | 1.149812e-48 | -8.615850e-47 |
| Msa0704780 | Msa1343480 | 0.814789 | 1.288033e-51 | -8.615850e-47 |
| Msa0704780 | Msa1347610 | -0.810973 | 8.830323e-51 | -8.615850e-47 |
| Msa0704780 | Msa1348330 | -0.844807 | 6.013219e-59 | -8.615850e-47 |
| Msa0704780 | Msa1349850 | 0.857597 | 1.464526e-62 | -8.615850e-47 |
| Msa0704780 | Msa1352630 | 0.826079 | 3.302502e-54 | -8.615850e-47 |
| Msa0704780 | Msa1362590 | -0.822685 | 2.075769e-53 | -8.615850e-47 |
| Msa0704780 | Msa1366140 | 0.802348 | 5.853705e-49 | -8.615850e-47 |
| Msa0704780 | Msa1368660 | 0.800910 | 1.154590e-48 | -8.615850e-47 |
| Msa0704780 | Msa1369180 | 0.818150 | 2.278133e-52 | -8.615850e-47 |
| Msa0704780 | Msa1371800 | -0.856285 | 3.566919e-62 | -8.615850e-47 |
| Msa0704780 | Msa1372030 | -0.830004 | 3.747658e-55 | -8.615850e-47 |
| Msa0704780 | Msa1376310 | -0.856083 | 4.089159e-62 | -8.615850e-47 |
| Msa0704780 | Msa1382750 | 0.803318 | 3.691058e-49 | -8.615850e-47 |
| Msa0704780 | Msa1388270 | 0.812600 | 3.906822e-51 | -8.615850e-47 |
| Msa0704780 | Msa1401000 | 0.816823 | 4.532848e-52 | -8.615850e-47 |
| Msa0704780 | Msa1403950 | 0.842570 | 2.385563e-58 | -8.615850e-47 |
| Msa0704780 | Msa1413900 | 0.820802 | 5.657307e-53 | -8.615850e-47 |
| Msa0704780 | Msa1417950 | -0.801751 | 7.767129e-49 | -8.615850e-47 |
| Msa0704780 | Msa1420830 | -0.802088 | 6.623423e-49 | -8.615850e-47 |
| Msa0704780 | Msa1427180 | 0.883643 | 3.773075e-71 | -8.615850e-47 |
| Msa0704780 | Msa1427600 | 0.803193 | 3.917092e-49 | -8.615850e-47 |
| Msa0704780 | Msa1436620 | -0.803386 | 3.573368e-49 | -8.615850e-47 |
| Msa0704780 | Msa1438370 | -0.841286 | 5.211032e-58 | -8.615850e-47 |
| Msa0704780 | Msa1438510 | -0.812157 | 4.883542e-51 | -8.615850e-47 |
| Msa0704780 | Msa1447900 | -0.806419 | 8.301890e-50 | -8.615850e-47 |
| Msa0704780 | Msa1450630 | 0.847827 | 9.036310e-60 | -8.615850e-47 |
| Msa0704780 | Msa1451690 | 0.840932 | 6.455175e-58 | -8.615850e-47 |
| Msa0704780 | Msa1452200 | 0.813219 | 2.859743e-51 | -8.615850e-47 |
| Msa0704780 | Msa1452790 | 0.948709 | 5.508615e-107 | -8.615850e-47 |
| Msa0704780 | Msa1460970 | -0.834806 | 2.422388e-56 | -8.615850e-47 |
| Msa0130360 | Msa0704780 | -0.801981 | 6.965241e-49 | -8.615850e-47 |
| Msa0134300 | Msa0704780 | 0.817797 | 2.736784e-52 | -8.615850e-47 |
| Msa0134380 | Msa0704780 | 0.863536 | 2.320579e-64 | -8.615850e-47 |
| Msa0134390 | Msa0704780 | 0.845644 | 3.571158e-59 | -8.615850e-47 |
| Msa0134400 | Msa0704780 | 0.808507 | 2.994283e-50 | -8.615850e-47 |
| Msa0134420 | Msa0704780 | 0.825017 | 5.895264e-54 | -8.615850e-47 |
| Msa0136180 | Msa0704780 | 0.809380 | 1.947242e-50 | -8.615850e-47 |
| Msa0137010 | Msa0704780 | 0.856477 | 3.132742e-62 | -8.615850e-47 |
| Msa0154720 | Msa0704780 | 0.831907 | 1.278751e-55 | -8.615850e-47 |
| Msa0160650 | Msa0704780 | 0.805633 | 1.215035e-49 | -8.615850e-47 |
| Msa0180590 | Msa0704780 | 0.827519 | 1.496130e-54 | -8.615850e-47 |
| Msa0180600 | Msa0704780 | 0.853217 | 2.765230e-61 | -8.615850e-47 |
| Msa0180780 | Msa0704780 | 0.814500 | 1.492391e-51 | -8.615850e-47 |
| Msa0184330 | Msa0704780 | 0.811282 | 7.569780e-51 | -8.615850e-47 |
| Msa0186510 | Msa0704780 | 0.840361 | 9.106042e-58 | -8.615850e-47 |
| Msa0188500 | Msa0704780 | 0.852492 | 4.454435e-61 | -8.615850e-47 |
| Msa0192830 | Msa0704780 | -0.804667 | 1.935158e-49 | -8.615850e-47 |
| Msa0205250 | Msa0704780 | -0.802058 | 6.718090e-49 | -8.615850e-47 |
| Msa0206370 | Msa0704780 | -0.805456 | 1.323469e-49 | -8.615850e-47 |
| Msa0219840 | Msa0704780 | -0.807989 | 3.861023e-50 | -8.615850e-47 |
| Msa0220410 | Msa0704780 | 0.834413 | 3.041034e-56 | -8.615850e-47 |
| Msa0221460 | Msa0704780 | 0.834845 | 2.368182e-56 | -8.615850e-47 |
| Msa0223190 | Msa0704780 | 0.877166 | 7.810998e-69 | -8.615850e-47 |
| Msa0225800 | Msa0704780 | -0.807258 | 5.518386e-50 | -8.615850e-47 |
| Msa0225880 | Msa0704780 | 0.813316 | 2.722904e-51 | -8.615850e-47 |
| Msa0229750 | Msa0704780 | 0.882836 | 7.453753e-71 | -8.615850e-47 |
| Msa0230980 | Msa0704780 | 0.870084 | 1.905149e-66 | -8.615850e-47 |
| Msa0235080 | Msa0704780 | -0.812723 | 3.672769e-51 | -8.615850e-47 |
| Msa0367590 | Msa0704780 | 0.807835 | 4.163375e-50 | -8.615850e-47 |
| Msa0369040 | Msa0704780 | -0.841214 | 5.442567e-58 | -8.615850e-47 |
| Msa0371350 | Msa0704780 | 0.836068 | 1.161702e-56 | -8.615850e-47 |
| Msa0372990 | Msa0704780 | 0.810443 | 1.149645e-50 | -8.615850e-47 |
| Msa0375930 | Msa0704780 | 0.801065 | 1.073661e-48 | -8.615850e-47 |
| Msa0378670 | Msa0704780 | 0.830745 | 2.469596e-55 | -8.615850e-47 |
| Msa0378700 | Msa0704780 | 0.836167 | 1.096442e-56 | -8.615850e-47 |
| Msa0380590 | Msa0704780 | -0.802190 | 6.310996e-49 | -8.615850e-47 |
| Msa0385770 | Msa0704780 | 0.830020 | 3.715015e-55 | -8.615850e-47 |
| Msa0387740 | Msa0704780 | 0.867050 | 1.820109e-65 | -8.615850e-47 |
| Msa0391160 | Msa0704780 | 0.800622 | 1.322182e-48 | -8.615850e-47 |
| Msa0403720 | Msa0704780 | 0.875121 | 3.953628e-68 | -8.615850e-47 |
| Msa0416390 | Msa0704780 | -0.830606 | 2.672177e-55 | -8.615850e-47 |
| Msa0418100 | Msa0704780 | -0.801157 | 1.027945e-48 | -8.615850e-47 |
| Msa0419420 | Msa0704780 | 0.854170 | 1.471137e-61 | -8.615850e-47 |
| Msa0424570 | Msa0704780 | 0.802125 | 6.508655e-49 | -8.615850e-47 |
| Msa0428330 | Msa0704780 | 0.849971 | 2.295348e-60 | -8.615850e-47 |
| Msa0430040 | Msa0704780 | 0.812219 | 4.733575e-51 | -8.615850e-47 |
| Msa0431940 | Msa0704780 | 0.802954 | 4.389871e-49 | -8.615850e-47 |
| Msa0434090 | Msa0704780 | -0.825577 | 4.346316e-54 | -8.615850e-47 |
| Msa0436100 | Msa0704780 | -0.816720 | 4.781187e-52 | -8.615850e-47 |
| Msa0436600 | Msa0704780 | 0.816939 | 4.268764e-52 | -8.615850e-47 |
| Msa0436610 | Msa0704780 | 0.829848 | 4.091129e-55 | -8.615850e-47 |
| Msa0438680 | Msa0704780 | 0.846797 | 1.732874e-59 | -8.615850e-47 |
| Msa0468360 | Msa0704780 | 0.832201 | 1.081855e-55 | -8.615850e-47 |
| Msa0477900 | Msa0704780 | -0.830913 | 2.246772e-55 | -8.615850e-47 |
| Msa0481050 | Msa0704780 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
| Msa0238960 | Msa0704780 | 0.850829 | 1.318597e-60 | -8.615850e-47 |
| Msa0244820 | Msa0704780 | 0.835493 | 1.624985e-56 | -8.615850e-47 |
| Msa0260470 | Msa0704780 | 0.809646 | 1.707494e-50 | -8.615850e-47 |
| Msa0260570 | Msa0704780 | -0.800119 | 1.673977e-48 | -8.615850e-47 |
| Msa0260630 | Msa0704780 | -0.800164 | 1.638329e-48 | -8.615850e-47 |
| Msa0260980 | Msa0704780 | -0.803905 | 2.789220e-49 | -8.615850e-47 |
| Msa0264420 | Msa0704780 | 0.872033 | 4.338951e-67 | -8.615850e-47 |
| Msa0267450 | Msa0704780 | 0.811121 | 8.204402e-51 | -8.615850e-47 |
| Msa0267510 | Msa0704780 | 0.808322 | 3.278651e-50 | -8.615850e-47 |
| Msa0270460 | Msa0704780 | 0.869289 | 3.462956e-66 | -8.615850e-47 |
| Msa0273360 | Msa0704780 | -0.809452 | 1.879163e-50 | -8.615850e-47 |
| Msa0274950 | Msa0704780 | -0.816153 | 6.403988e-52 | -8.615850e-47 |
| Msa0276800 | Msa0704780 | 0.859513 | 3.927965e-63 | -8.615850e-47 |
| Msa0299540 | Msa0704780 | 0.809395 | 1.932757e-50 | -8.615850e-47 |
| Msa0300670 | Msa0704780 | 0.833519 | 5.091443e-56 | -8.615850e-47 |
| Msa0302310 | Msa0704780 | 0.880411 | 5.613510e-70 | -8.615850e-47 |
| Msa0304110 | Msa0704780 | 0.806704 | 7.229876e-50 | -8.615850e-47 |
| Msa0309060 | Msa0704780 | 0.867451 | 1.355506e-65 | -8.615850e-47 |
| Msa0316720 | Msa0704780 | 0.869640 | 2.661288e-66 | -8.615850e-47 |
| Msa0336430 | Msa0704780 | -0.825564 | 4.375202e-54 | -8.615850e-47 |
| Msa0336520 | Msa0704780 | -0.826666 | 2.394030e-54 | -8.615850e-47 |
| Msa0337760 | Msa0704780 | 0.833192 | 6.139839e-56 | -8.615850e-47 |
| Msa0339670 | Msa0704780 | 0.874834 | 4.954025e-68 | -8.615850e-47 |
| Msa0364010 | Msa0704780 | 0.843027 | 1.803025e-58 | -8.615850e-47 |
| Msa0484250 | Msa0704780 | 0.802295 | 6.002375e-49 | -8.615850e-47 |
| Msa0496470 | Msa0704780 | 0.820770 | 5.753176e-53 | -8.615850e-47 |
| Msa0496570 | Msa0704780 | 0.831099 | 2.022123e-55 | -8.615850e-47 |
| Msa0506750 | Msa0704780 | -0.806209 | 9.194291e-50 | -8.615850e-47 |
| Msa0511600 | Msa0704780 | 0.847529 | 1.091913e-59 | -8.615850e-47 |
| Msa0516000 | Msa0704780 | 0.807520 | 4.855720e-50 | -8.615850e-47 |
| Msa0521940 | Msa0704780 | -0.840812 | 6.938930e-58 | -8.615850e-47 |
| Msa0526230 | Msa0704780 | 0.804678 | 1.924629e-49 | -8.615850e-47 |
| Msa0541880 | Msa0704780 | -0.809829 | 1.559696e-50 | -8.615850e-47 |
| Msa0541940 | Msa0704780 | -0.808734 | 2.677459e-50 | -8.615850e-47 |
| Msa0546370 | Msa0704780 | 0.818279 | 2.129323e-52 | -8.615850e-47 |
| Msa0549330 | Msa0704780 | 0.806487 | 8.034027e-50 | -8.615850e-47 |
| Msa0568290 | Msa0704780 | 0.898630 | 4.394761e-77 | -8.615850e-47 |
| Msa0568460 | Msa0704780 | 0.860170 | 2.489204e-63 | -8.615850e-47 |
| Msa0568710 | Msa0704780 | -0.825952 | 3.540565e-54 | -8.615850e-47 |
| Msa0572270 | Msa0704780 | 0.837056 | 6.507909e-57 | -8.615850e-47 |
| Msa0572360 | Msa0704780 | -0.801898 | 7.243848e-49 | -8.615850e-47 |
| Msa0575960 | Msa0704780 | 0.801498 | 8.751594e-49 | -8.615850e-47 |
| Msa0580540 | Msa0704780 | 0.849049 | 4.148906e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704780 | MtrunA17_Chr8g0382991 | 90.452 | 199 | 13 | 2 | 1 | 198 | 1 | 194 | 3.55e-128 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704780 | AT2G21970.1 | 56.566 | 198 | 74 | 5 | 1 | 192 | 1 | 192 | 6.34e-63 | 194 |
Find 83 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACAAACTGATTCTTTAA+TGG | 0.149334 | 4_4:+77282721 | Msa0704780:exon |
| ATGTTTGTGTTCGCGCCTTC+TGG | 0.200953 | 4_4:-77282863 | None:intergenic |
| TTCTTTACGGGTCTTGATTA+TGG | 0.222006 | 4_4:-77282942 | None:intergenic |
| CTTGCATGTCTTCTTCTTTA+CGG | 0.282945 | 4_4:-77282955 | None:intergenic |
| TTGCATGTCTTCTTCTTTAC+GGG | 0.300636 | 4_4:-77282954 | None:intergenic |
| CTTAGAACTCTCGATATATT+CGG | 0.302152 | 4_4:-77283014 | None:intergenic |
| TTGTTTGGGTGCGGTTACTA+TGG | 0.311981 | 4_4:+77283317 | Msa0704780:CDS |
| GAATTCGGTGTTCAGGAAAA+TGG | 0.321728 | 4_4:+77283263 | Msa0704780:CDS |
| CCTTCTGGTTCAGTCGGTTT+GGG | 0.324652 | 4_4:-77282848 | None:intergenic |
| GCCTTCTGGTTCAGTCGGTT+TGG | 0.330559 | 4_4:-77282849 | None:intergenic |
| AGCAGTTGCGGAGAAGAAAT+TGG | 0.350239 | 4_4:-77282584 | None:intergenic |
| GAGGCGGGTGGGATTTGTTT+GGG | 0.354432 | 4_4:+77283303 | Msa0704780:CDS |
| ACTTGAGAAGTGGTAGTTGT+AGG | 0.364804 | 4_4:-77282682 | None:intergenic |
| GGAGGCGGGTGGGATTTGTT+TGG | 0.366265 | 4_4:+77283302 | Msa0704780:CDS |
| ATGTAACTGATTTCATTTAG+TGG | 0.375551 | 4_4:+77283746 | Msa0704780:three_prime_UTR |
| TGGTTCAGTCGGTTTGGGTT+TGG | 0.403211 | 4_4:-77282843 | None:intergenic |
| GAACGAGACGATGATACTTT+TGG | 0.405757 | 4_4:-77282782 | None:intergenic |
| GGAGTTGGTGACGGGGAATT+CGG | 0.411121 | 4_4:+77283248 | Msa0704780:CDS |
| CTTGAGAAGTGGTAGTTGTA+GGG | 0.421678 | 4_4:-77282681 | None:intergenic |
| TTCAGGAAAATGGATATTGC+AGG | 0.423134 | 4_4:+77283273 | Msa0704780:CDS |
| CGCGAATTTAGTATTGAACT+TGG | 0.427182 | 4_4:+77283602 | Msa0704780:three_prime_UTR |
| TGACGGGGAATTCGGTGTTC+AGG | 0.428337 | 4_4:+77283256 | Msa0704780:CDS |
| ATCAATTAGCGAATCAATGA+AGG | 0.432023 | 4_4:-77283409 | None:intergenic |
| CGGAGATGATTTCGAAATCC+TGG | 0.437279 | 4_4:-77283042 | None:intergenic |
| CTATGGCGGCAATGTTTGCT+TGG | 0.440446 | 4_4:+77283334 | Msa0704780:CDS |
| TTCATTATTCAAATTTAAAG+TGG | 0.447869 | 4_4:+77283710 | Msa0704780:three_prime_UTR |
| GTGACGGTGGAGTTGGTGAC+GGG | 0.448839 | 4_4:+77283240 | Msa0704780:CDS |
| CTAATTGATCAAATCGTTGA+CGG | 0.458559 | 4_4:+77283423 | Msa0704780:CDS |
| CCGCCCCAGAAAACCTGGTC+AGG | 0.477101 | 4_4:+77282805 | Msa0704780:CDS |
| GTCTTGATTATGGCGCCGAC+TGG | 0.478139 | 4_4:-77282932 | None:intergenic |
| CGTTCCCGCCCCAGAAAACC+TGG | 0.482952 | 4_4:+77282800 | Msa0704780:CDS |
| TGTTACCATGGCGAGGCGGC+CGG | 0.483455 | 4_4:-77283062 | None:intergenic |
| AAGAATCAGTTTGTTTGTGA+GGG | 0.497960 | 4_4:-77282715 | None:intergenic |
| AGTCGGTTTGGGTTTGGTGA+CGG | 0.503663 | 4_4:-77282837 | None:intergenic |
| GATTATGGCGCCGACTGGAT+CGG | 0.505400 | 4_4:-77282927 | None:intergenic |
| AATGGATATTGCAGGGATAA+CGG | 0.508574 | 4_4:+77283281 | Msa0704780:CDS |
| AAAGTTTGAGACTTGAGAAG+TGG | 0.510886 | 4_4:-77282692 | None:intergenic |
| TTCGGAAAGAGTGGCGAAGA+AGG | 0.517357 | 4_4:-77282996 | None:intergenic |
| AAAGAATCAGTTTGTTTGTG+AGG | 0.521674 | 4_4:-77282716 | None:intergenic |
| TTCGCGCCTTCTGGTTCAGT+CGG | 0.523523 | 4_4:-77282854 | None:intergenic |
| TATTGCAGGGATAACGGAGG+CGG | 0.525078 | 4_4:+77283287 | Msa0704780:CDS |
| GCAGATGGTGTTTGCAGCGA+CGG | 0.525390 | 4_4:+77283218 | Msa0704780:intron |
| ATGTTCATAGATTGTAAGAT+GGG | 0.530332 | 4_4:+77283647 | Msa0704780:three_prime_UTR |
| AATGAATGAACGAACGTTGA+AGG | 0.532387 | 4_4:-77282658 | None:intergenic |
| TTTGGGTGCGGTTACTATGG+CGG | 0.548728 | 4_4:+77283320 | Msa0704780:CDS |
| CTATGCACTCTCAGATCATA+CGG | 0.549836 | 4_4:+77282902 | Msa0704780:CDS |
| GGGTGGGATTTGTTTGGGTG+CGG | 0.551031 | 4_4:+77283308 | Msa0704780:CDS |
| CAGGGATAACGGAGGCGGGT+GGG | 0.551178 | 4_4:+77283292 | Msa0704780:CDS |
| GGGTGAACTCTGATTCATCA+TGG | 0.556267 | 4_4:+77283467 | Msa0704780:exon |
| GCAGGGATAACGGAGGCGGG+TGG | 0.556957 | 4_4:+77283291 | Msa0704780:CDS |
| CGAGAGTTCTAAGAAAAGCC+AGG | 0.559263 | 4_4:+77283024 | Msa0704780:CDS |
| GGTGACGGTGGAGTTGGTGA+CGG | 0.559321 | 4_4:+77283239 | Msa0704780:CDS |
| ACAATCTATGAACATGCTCA+AGG | 0.561369 | 4_4:-77283639 | None:intergenic |
| GTGTGACTAACTGCGAGCTC+CGG | 0.567817 | 4_4:+77282756 | Msa0704780:CDS |
| ATTGCAGGGATAACGGAGGC+GGG | 0.570947 | 4_4:+77283288 | Msa0704780:CDS |
| CATCTCCGGCCGCCTCGCCA+TGG | 0.570988 | 4_4:+77283057 | Msa0704780:CDS |
| CATGTTCATAGATTGTAAGA+TGG | 0.573227 | 4_4:+77283646 | Msa0704780:three_prime_UTR |
| TGACGGTGGAGTTGGTGACG+GGG | 0.573283 | 4_4:+77283241 | Msa0704780:CDS |
| ACGGAAAATTGAACCTGACC+AGG | 0.573450 | 4_4:-77282818 | None:intergenic |
| CAGGATTTCGAAATCATCTC+CGG | 0.574628 | 4_4:+77283043 | Msa0704780:CDS |
| TAATAACGAGTAAGCAGTTG+CGG | 0.582455 | 4_4:-77282596 | None:intergenic |
| ATTGTAAGATGGGTGGTTAG+CGG | 0.585816 | 4_4:+77283657 | Msa0704780:three_prime_UTR |
| AGCGACGGTGACGGTGGAGT+TGG | 0.587633 | 4_4:+77283233 | Msa0704780:CDS |
| TGATTCATCATGGTTTGATG+AGG | 0.593825 | 4_4:+77283477 | Msa0704780:exon |
| CTCGATATATTCGGAAAGAG+TGG | 0.596447 | 4_4:-77283005 | None:intergenic |
| TGTGAAGATTCGATCCACTC+TGG | 0.602920 | 4_4:-77283373 | None:intergenic |
| TTCATAGATTGTAAGATGGG+TGG | 0.607672 | 4_4:+77283650 | Msa0704780:three_prime_UTR |
| CAATCTATGAACATGCTCAA+GGG | 0.610585 | 4_4:-77283638 | None:intergenic |
| GAAGAAGGAGGACACGTCAT+CGG | 0.616933 | 4_4:-77282981 | None:intergenic |
| GGAAAGAGTGGCGAAGAAGG+AGG | 0.623174 | 4_4:-77282993 | None:intergenic |
| GGTGTTTGCAGCGACGGTGA+CGG | 0.625726 | 4_4:+77283224 | Msa0704780:CDS |
| CTCAAGTGCTCGTACCAGAG+TGG | 0.631041 | 4_4:+77283359 | Msa0704780:CDS |
| TTGTTCTATGATGATAGCGA+GGG | 0.632266 | 4_4:+77283447 | Msa0704780:CDS |
| TTTGTTCTATGATGATAGCG+AGG | 0.632796 | 4_4:+77283446 | Msa0704780:CDS |
| TCAGGAAAATGGATATTGCA+GGG | 0.643208 | 4_4:+77283274 | Msa0704780:CDS |
| CAAACATCGTTCTACAACCG+CGG | 0.645183 | 4_4:+77282879 | Msa0704780:CDS |
| CCCAAACCGACTGAACCAGA+AGG | 0.654325 | 4_4:+77282848 | Msa0704780:CDS |
| GTTTGCAGCGACGGTGACGG+TGG | 0.675734 | 4_4:+77283227 | Msa0704780:CDS |
| ATTGGATACGTAGCACACAC+AGG | 0.687544 | 4_4:-77282566 | None:intergenic |
| AGGTATCAGACAAAACTATG+TGG | 0.693305 | 4_4:-77282546 | None:intergenic |
| GGATATTGCAGGGATAACGG+AGG | 0.721943 | 4_4:+77283284 | Msa0704780:CDS |
| GATCTGAGAGTGCATAGCCG+CGG | 0.723172 | 4_4:-77282896 | None:intergenic |
| TCATACGGTTCCGATCCAGT+CGG | 0.759723 | 4_4:+77282917 | Msa0704780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATACTATGACTTTTTTT+TGG | + | chr4_4:77282625-77282644 | Msa0704780:five_prime_UTR | 15.0% |
| !! | TTCATTATTCAAATTTAAAG+TGG | + | chr4_4:77283710-77283729 | Msa0704780:three_prime_UTR | 15.0% |
| !!! | TTAATACTATGACTTTTTTT+TGG | + | chr4_4:77282625-77282644 | Msa0704780:five_prime_UTR | 15.0% |
| !! | TTCATTATTCAAATTTAAAG+TGG | + | chr4_4:77283710-77283729 | Msa0704780:three_prime_UTR | 15.0% |
| !! | CATTATTCTCAGTTTATTAT+TGG | + | chr4_4:77283125-77283144 | Msa0704780:intron | 20.0% |
| !! | TTCCTCTAATATAGTATATA+TGG | - | chr4_4:77283168-77283187 | None:intergenic | 20.0% |
| !! | CATTATTCTCAGTTTATTAT+TGG | + | chr4_4:77283125-77283144 | Msa0704780:intron | 20.0% |
| !! | TTCCTCTAATATAGTATATA+TGG | - | chr4_4:77283168-77283187 | None:intergenic | 20.0% |
| !! | CAAACAAACTGATTCTTTAA+TGG | + | chr4_4:77282721-77282740 | Msa0704780:exon | 25.0% |
| ! | AATATAGTATATATGGACAC+AGG | - | chr4_4:77283161-77283180 | None:intergenic | 25.0% |
| ! | GTCCATATATACTATATTAG+AGG | + | chr4_4:77283163-77283182 | Msa0704780:intron | 25.0% |
| !!! | ATTGTTGCTTTTTATTGATG+TGG | + | chr4_4:77283191-77283210 | Msa0704780:intron | 25.0% |
| ! | ATGTTCATAGATTGTAAGAT+GGG | + | chr4_4:77283647-77283666 | Msa0704780:three_prime_UTR | 25.0% |
| !! | ATGTAACTGATTTCATTTAG+TGG | + | chr4_4:77283746-77283765 | Msa0704780:three_prime_UTR | 25.0% |
| !! | CAAACAAACTGATTCTTTAA+TGG | + | chr4_4:77282721-77282740 | Msa0704780:exon | 25.0% |
| ! | AATATAGTATATATGGACAC+AGG | - | chr4_4:77283161-77283180 | None:intergenic | 25.0% |
| ! | GTCCATATATACTATATTAG+AGG | + | chr4_4:77283163-77283182 | Msa0704780:intron | 25.0% |
| !!! | ATTGTTGCTTTTTATTGATG+TGG | + | chr4_4:77283191-77283210 | Msa0704780:intron | 25.0% |
| ! | ATGTTCATAGATTGTAAGAT+GGG | + | chr4_4:77283647-77283666 | Msa0704780:three_prime_UTR | 25.0% |
| !! | ATGTAACTGATTTCATTTAG+TGG | + | chr4_4:77283746-77283765 | Msa0704780:three_prime_UTR | 25.0% |
| ! | AAGAATCAGTTTGTTTGTGA+GGG | - | chr4_4:77282718-77282737 | None:intergenic | 30.0% |
| ! | AAAGAATCAGTTTGTTTGTG+AGG | - | chr4_4:77282719-77282738 | None:intergenic | 30.0% |
| CTTAGAACTCTCGATATATT+CGG | - | chr4_4:77283017-77283036 | None:intergenic | 30.0% | |
| ATCAATTAGCGAATCAATGA+AGG | - | chr4_4:77283412-77283431 | None:intergenic | 30.0% | |
| CTAATTGATCAAATCGTTGA+CGG | + | chr4_4:77283423-77283442 | Msa0704780:CDS | 30.0% | |
| CATGTTCATAGATTGTAAGA+TGG | + | chr4_4:77283646-77283665 | Msa0704780:three_prime_UTR | 30.0% | |
| ! | AAGAATCAGTTTGTTTGTGA+GGG | - | chr4_4:77282718-77282737 | None:intergenic | 30.0% |
| ! | AAAGAATCAGTTTGTTTGTG+AGG | - | chr4_4:77282719-77282738 | None:intergenic | 30.0% |
| CTTAGAACTCTCGATATATT+CGG | - | chr4_4:77283017-77283036 | None:intergenic | 30.0% | |
| ATCAATTAGCGAATCAATGA+AGG | - | chr4_4:77283412-77283431 | None:intergenic | 30.0% | |
| CTAATTGATCAAATCGTTGA+CGG | + | chr4_4:77283423-77283442 | Msa0704780:CDS | 30.0% | |
| CATGTTCATAGATTGTAAGA+TGG | + | chr4_4:77283646-77283665 | Msa0704780:three_prime_UTR | 30.0% | |
| AGGTATCAGACAAAACTATG+TGG | - | chr4_4:77282549-77282568 | None:intergenic | 35.0% | |
| TAATAACGAGTAAGCAGTTG+CGG | - | chr4_4:77282599-77282618 | None:intergenic | 35.0% | |
| AATGAATGAACGAACGTTGA+AGG | - | chr4_4:77282661-77282680 | None:intergenic | 35.0% | |
| ! | AAAGTTTGAGACTTGAGAAG+TGG | - | chr4_4:77282695-77282714 | None:intergenic | 35.0% |
| TTCTTTACGGGTCTTGATTA+TGG | - | chr4_4:77282945-77282964 | None:intergenic | 35.0% | |
| TTGCATGTCTTCTTCTTTAC+GGG | - | chr4_4:77282957-77282976 | None:intergenic | 35.0% | |
| CTTGCATGTCTTCTTCTTTA+CGG | - | chr4_4:77282958-77282977 | None:intergenic | 35.0% | |
| GATCACATGTGTTAGTGTTA+GGG | - | chr4_4:77283091-77283110 | None:intergenic | 35.0% | |
| TGATCACATGTGTTAGTGTT+AGG | - | chr4_4:77283092-77283111 | None:intergenic | 35.0% | |
| !!! | GTTGCTTTTTATTGATGTGG+TGG | + | chr4_4:77283194-77283213 | Msa0704780:intron | 35.0% |
| TTCAGGAAAATGGATATTGC+AGG | + | chr4_4:77283273-77283292 | Msa0704780:CDS | 35.0% | |
| TCAGGAAAATGGATATTGCA+GGG | + | chr4_4:77283274-77283293 | Msa0704780:CDS | 35.0% | |
| AATGGATATTGCAGGGATAA+CGG | + | chr4_4:77283281-77283300 | Msa0704780:CDS | 35.0% | |
| ! | TTTGTTCTATGATGATAGCG+AGG | + | chr4_4:77283446-77283465 | Msa0704780:CDS | 35.0% |
| ! | TTGTTCTATGATGATAGCGA+GGG | + | chr4_4:77283447-77283466 | Msa0704780:CDS | 35.0% |
| TGATTCATCATGGTTTGATG+AGG | + | chr4_4:77283477-77283496 | Msa0704780:exon | 35.0% | |
| ! | CGCGAATTTAGTATTGAACT+TGG | + | chr4_4:77283602-77283621 | Msa0704780:three_prime_UTR | 35.0% |
| CAATCTATGAACATGCTCAA+GGG | - | chr4_4:77283641-77283660 | None:intergenic | 35.0% | |
| ACAATCTATGAACATGCTCA+AGG | - | chr4_4:77283642-77283661 | None:intergenic | 35.0% | |
| TTCATAGATTGTAAGATGGG+TGG | + | chr4_4:77283650-77283669 | Msa0704780:three_prime_UTR | 35.0% | |
| AGGTATCAGACAAAACTATG+TGG | - | chr4_4:77282549-77282568 | None:intergenic | 35.0% | |
| TAATAACGAGTAAGCAGTTG+CGG | - | chr4_4:77282599-77282618 | None:intergenic | 35.0% | |
| AATGAATGAACGAACGTTGA+AGG | - | chr4_4:77282661-77282680 | None:intergenic | 35.0% | |
| ! | AAAGTTTGAGACTTGAGAAG+TGG | - | chr4_4:77282695-77282714 | None:intergenic | 35.0% |
| TTCTTTACGGGTCTTGATTA+TGG | - | chr4_4:77282945-77282964 | None:intergenic | 35.0% | |
| TTGCATGTCTTCTTCTTTAC+GGG | - | chr4_4:77282957-77282976 | None:intergenic | 35.0% | |
| CTTGCATGTCTTCTTCTTTA+CGG | - | chr4_4:77282958-77282977 | None:intergenic | 35.0% | |
| GATCACATGTGTTAGTGTTA+GGG | - | chr4_4:77283091-77283110 | None:intergenic | 35.0% | |
| TGATCACATGTGTTAGTGTT+AGG | - | chr4_4:77283092-77283111 | None:intergenic | 35.0% | |
| !!! | GTTGCTTTTTATTGATGTGG+TGG | + | chr4_4:77283194-77283213 | Msa0704780:intron | 35.0% |
| TTCAGGAAAATGGATATTGC+AGG | + | chr4_4:77283273-77283292 | Msa0704780:CDS | 35.0% | |
| TCAGGAAAATGGATATTGCA+GGG | + | chr4_4:77283274-77283293 | Msa0704780:CDS | 35.0% | |
| AATGGATATTGCAGGGATAA+CGG | + | chr4_4:77283281-77283300 | Msa0704780:CDS | 35.0% | |
| ! | TTTGTTCTATGATGATAGCG+AGG | + | chr4_4:77283446-77283465 | Msa0704780:CDS | 35.0% |
| ! | TTGTTCTATGATGATAGCGA+GGG | + | chr4_4:77283447-77283466 | Msa0704780:CDS | 35.0% |
| TGATTCATCATGGTTTGATG+AGG | + | chr4_4:77283477-77283496 | Msa0704780:exon | 35.0% | |
| ! | CGCGAATTTAGTATTGAACT+TGG | + | chr4_4:77283602-77283621 | Msa0704780:three_prime_UTR | 35.0% |
| CAATCTATGAACATGCTCAA+GGG | - | chr4_4:77283641-77283660 | None:intergenic | 35.0% | |
| ACAATCTATGAACATGCTCA+AGG | - | chr4_4:77283642-77283661 | None:intergenic | 35.0% | |
| TTCATAGATTGTAAGATGGG+TGG | + | chr4_4:77283650-77283669 | Msa0704780:three_prime_UTR | 35.0% | |
| CTTGAGAAGTGGTAGTTGTA+GGG | - | chr4_4:77282684-77282703 | None:intergenic | 40.0% | |
| ACTTGAGAAGTGGTAGTTGT+AGG | - | chr4_4:77282685-77282704 | None:intergenic | 40.0% | |
| ! | GAACGAGACGATGATACTTT+TGG | - | chr4_4:77282785-77282804 | None:intergenic | 40.0% |
| CTATGCACTCTCAGATCATA+CGG | + | chr4_4:77282902-77282921 | Msa0704780:CDS | 40.0% | |
| CTCGATATATTCGGAAAGAG+TGG | - | chr4_4:77283008-77283027 | None:intergenic | 40.0% | |
| CAGGATTTCGAAATCATCTC+CGG | + | chr4_4:77283043-77283062 | Msa0704780:CDS | 40.0% | |
| !!! | GTGTTAGGGTTTTGTTACCA+TGG | - | chr4_4:77283077-77283096 | None:intergenic | 40.0% |
| !! | GAATTCGGTGTTCAGGAAAA+TGG | + | chr4_4:77283263-77283282 | Msa0704780:CDS | 40.0% |
| ATTGTAAGATGGGTGGTTAG+CGG | + | chr4_4:77283657-77283676 | Msa0704780:three_prime_UTR | 40.0% | |
| CTTGAGAAGTGGTAGTTGTA+GGG | - | chr4_4:77282684-77282703 | None:intergenic | 40.0% | |
| ACTTGAGAAGTGGTAGTTGT+AGG | - | chr4_4:77282685-77282704 | None:intergenic | 40.0% | |
| ! | GAACGAGACGATGATACTTT+TGG | - | chr4_4:77282785-77282804 | None:intergenic | 40.0% |
| CTATGCACTCTCAGATCATA+CGG | + | chr4_4:77282902-77282921 | Msa0704780:CDS | 40.0% | |
| CTCGATATATTCGGAAAGAG+TGG | - | chr4_4:77283008-77283027 | None:intergenic | 40.0% | |
| CAGGATTTCGAAATCATCTC+CGG | + | chr4_4:77283043-77283062 | Msa0704780:CDS | 40.0% | |
| !!! | GTGTTAGGGTTTTGTTACCA+TGG | - | chr4_4:77283077-77283096 | None:intergenic | 40.0% |
| !! | GAATTCGGTGTTCAGGAAAA+TGG | + | chr4_4:77283263-77283282 | Msa0704780:CDS | 40.0% |
| ATTGTAAGATGGGTGGTTAG+CGG | + | chr4_4:77283657-77283676 | Msa0704780:three_prime_UTR | 40.0% | |
| ATTGGATACGTAGCACACAC+AGG | - | chr4_4:77282569-77282588 | None:intergenic | 45.0% | |
| AGCAGTTGCGGAGAAGAAAT+TGG | - | chr4_4:77282587-77282606 | None:intergenic | 45.0% | |
| !! | ACGATGATACTTTTGGTGGC+CGG | - | chr4_4:77282778-77282797 | None:intergenic | 45.0% |
| ! | CGAGACGATGATACTTTTGG+TGG | - | chr4_4:77282782-77282801 | None:intergenic | 45.0% |
| ! | TGAACCTGACCAGGTTTTCT+GGG | - | chr4_4:77282812-77282831 | None:intergenic | 45.0% |
| ! | TTGAACCTGACCAGGTTTTC+TGG | - | chr4_4:77282813-77282832 | None:intergenic | 45.0% |
| ACGGAAAATTGAACCTGACC+AGG | - | chr4_4:77282821-77282840 | None:intergenic | 45.0% | |
| CAAACATCGTTCTACAACCG+CGG | + | chr4_4:77282879-77282898 | Msa0704780:CDS | 45.0% | |
| !! | CGAGAGTTCTAAGAAAAGCC+AGG | + | chr4_4:77283024-77283043 | Msa0704780:CDS | 45.0% |
| CGGAGATGATTTCGAAATCC+TGG | - | chr4_4:77283045-77283064 | None:intergenic | 45.0% | |
| ! | TATTGATGTGGTGGTGCAGA+TGG | + | chr4_4:77283203-77283222 | Msa0704780:intron | 45.0% |
| TTGTTTGGGTGCGGTTACTA+TGG | + | chr4_4:77283317-77283336 | Msa0704780:CDS | 45.0% | |
| TGTGAAGATTCGATCCACTC+TGG | - | chr4_4:77283376-77283395 | None:intergenic | 45.0% | |
| GGGTGAACTCTGATTCATCA+TGG | + | chr4_4:77283467-77283486 | Msa0704780:exon | 45.0% | |
| ATTGGATACGTAGCACACAC+AGG | - | chr4_4:77282569-77282588 | None:intergenic | 45.0% | |
| AGCAGTTGCGGAGAAGAAAT+TGG | - | chr4_4:77282587-77282606 | None:intergenic | 45.0% | |
| !! | ACGATGATACTTTTGGTGGC+CGG | - | chr4_4:77282778-77282797 | None:intergenic | 45.0% |
| ! | CGAGACGATGATACTTTTGG+TGG | - | chr4_4:77282782-77282801 | None:intergenic | 45.0% |
| ! | TGAACCTGACCAGGTTTTCT+GGG | - | chr4_4:77282812-77282831 | None:intergenic | 45.0% |
| ! | TTGAACCTGACCAGGTTTTC+TGG | - | chr4_4:77282813-77282832 | None:intergenic | 45.0% |
| ACGGAAAATTGAACCTGACC+AGG | - | chr4_4:77282821-77282840 | None:intergenic | 45.0% | |
| CAAACATCGTTCTACAACCG+CGG | + | chr4_4:77282879-77282898 | Msa0704780:CDS | 45.0% | |
| !! | CGAGAGTTCTAAGAAAAGCC+AGG | + | chr4_4:77283024-77283043 | Msa0704780:CDS | 45.0% |
| CGGAGATGATTTCGAAATCC+TGG | - | chr4_4:77283045-77283064 | None:intergenic | 45.0% | |
| ! | TATTGATGTGGTGGTGCAGA+TGG | + | chr4_4:77283203-77283222 | Msa0704780:intron | 45.0% |
| TTGTTTGGGTGCGGTTACTA+TGG | + | chr4_4:77283317-77283336 | Msa0704780:CDS | 45.0% | |
| TGTGAAGATTCGATCCACTC+TGG | - | chr4_4:77283376-77283395 | None:intergenic | 45.0% | |
| GGGTGAACTCTGATTCATCA+TGG | + | chr4_4:77283467-77283486 | Msa0704780:exon | 45.0% | |
| ! | GAACCTGACCAGGTTTTCTG+GGG | - | chr4_4:77282811-77282830 | None:intergenic | 50.0% |
| !! | AGTCGGTTTGGGTTTGGTGA+CGG | - | chr4_4:77282840-77282859 | None:intergenic | 50.0% |
| !! | TGGTTCAGTCGGTTTGGGTT+TGG | - | chr4_4:77282846-77282865 | None:intergenic | 50.0% |
| !! | CCTTCTGGTTCAGTCGGTTT+GGG | - | chr4_4:77282851-77282870 | None:intergenic | 50.0% |
| ATGTTTGTGTTCGCGCCTTC+TGG | - | chr4_4:77282866-77282885 | None:intergenic | 50.0% | |
| TCATACGGTTCCGATCCAGT+CGG | + | chr4_4:77282917-77282936 | Msa0704780:CDS | 50.0% | |
| GAAGAAGGAGGACACGTCAT+CGG | - | chr4_4:77282984-77283003 | None:intergenic | 50.0% | |
| TTCGGAAAGAGTGGCGAAGA+AGG | - | chr4_4:77282999-77283018 | None:intergenic | 50.0% | |
| !! | GTTTTGTTACCATGGCGAGG+CGG | - | chr4_4:77283069-77283088 | None:intergenic | 50.0% |
| !!! | AGGGTTTTGTTACCATGGCG+AGG | - | chr4_4:77283072-77283091 | None:intergenic | 50.0% |
| ! | GGATATTGCAGGGATAACGG+AGG | + | chr4_4:77283284-77283303 | Msa0704780:CDS | 50.0% |
| !! | TATTGCAGGGATAACGGAGG+CGG | + | chr4_4:77283287-77283306 | Msa0704780:CDS | 50.0% |
| TTTGGGTGCGGTTACTATGG+CGG | + | chr4_4:77283320-77283339 | Msa0704780:CDS | 50.0% | |
| CTATGGCGGCAATGTTTGCT+TGG | + | chr4_4:77283334-77283353 | Msa0704780:CDS | 50.0% | |
| ! | GAACCTGACCAGGTTTTCTG+GGG | - | chr4_4:77282811-77282830 | None:intergenic | 50.0% |
| !! | AGTCGGTTTGGGTTTGGTGA+CGG | - | chr4_4:77282840-77282859 | None:intergenic | 50.0% |
| !! | TGGTTCAGTCGGTTTGGGTT+TGG | - | chr4_4:77282846-77282865 | None:intergenic | 50.0% |
| !! | CCTTCTGGTTCAGTCGGTTT+GGG | - | chr4_4:77282851-77282870 | None:intergenic | 50.0% |
| ATGTTTGTGTTCGCGCCTTC+TGG | - | chr4_4:77282866-77282885 | None:intergenic | 50.0% | |
| TCATACGGTTCCGATCCAGT+CGG | + | chr4_4:77282917-77282936 | Msa0704780:CDS | 50.0% | |
| GAAGAAGGAGGACACGTCAT+CGG | - | chr4_4:77282984-77283003 | None:intergenic | 50.0% | |
| TTCGGAAAGAGTGGCGAAGA+AGG | - | chr4_4:77282999-77283018 | None:intergenic | 50.0% | |
| !! | GTTTTGTTACCATGGCGAGG+CGG | - | chr4_4:77283069-77283088 | None:intergenic | 50.0% |
| !!! | AGGGTTTTGTTACCATGGCG+AGG | - | chr4_4:77283072-77283091 | None:intergenic | 50.0% |
| ! | GGATATTGCAGGGATAACGG+AGG | + | chr4_4:77283284-77283303 | Msa0704780:CDS | 50.0% |
| !! | TATTGCAGGGATAACGGAGG+CGG | + | chr4_4:77283287-77283306 | Msa0704780:CDS | 50.0% |
| TTTGGGTGCGGTTACTATGG+CGG | + | chr4_4:77283320-77283339 | Msa0704780:CDS | 50.0% | |
| CTATGGCGGCAATGTTTGCT+TGG | + | chr4_4:77283334-77283353 | Msa0704780:CDS | 50.0% | |
| GTGTGACTAACTGCGAGCTC+CGG | + | chr4_4:77282756-77282775 | Msa0704780:CDS | 55.0% | |
| CCCAAACCGACTGAACCAGA+AGG | + | chr4_4:77282848-77282867 | Msa0704780:CDS | 55.0% | |
| !! | GCCTTCTGGTTCAGTCGGTT+TGG | - | chr4_4:77282852-77282871 | None:intergenic | 55.0% |
| !! | TTCGCGCCTTCTGGTTCAGT+CGG | - | chr4_4:77282857-77282876 | None:intergenic | 55.0% |
| ! | GATCTGAGAGTGCATAGCCG+CGG | - | chr4_4:77282899-77282918 | None:intergenic | 55.0% |
| !! | GATTATGGCGCCGACTGGAT+CGG | - | chr4_4:77282930-77282949 | None:intergenic | 55.0% |
| !! | GTCTTGATTATGGCGCCGAC+TGG | - | chr4_4:77282935-77282954 | None:intergenic | 55.0% |
| GGAAAGAGTGGCGAAGAAGG+AGG | - | chr4_4:77282996-77283015 | None:intergenic | 55.0% | |
| GCAGATGGTGTTTGCAGCGA+CGG | + | chr4_4:77283218-77283237 | Msa0704780:intron | 55.0% | |
| !! | GGAGTTGGTGACGGGGAATT+CGG | + | chr4_4:77283248-77283267 | Msa0704780:CDS | 55.0% |
| !! | TGACGGGGAATTCGGTGTTC+AGG | + | chr4_4:77283256-77283275 | Msa0704780:CDS | 55.0% |
| !! | ATTGCAGGGATAACGGAGGC+GGG | + | chr4_4:77283288-77283307 | Msa0704780:CDS | 55.0% |
| ! | GAGGCGGGTGGGATTTGTTT+GGG | + | chr4_4:77283303-77283322 | Msa0704780:CDS | 55.0% |
| ! | GGGTGGGATTTGTTTGGGTG+CGG | + | chr4_4:77283308-77283327 | Msa0704780:CDS | 55.0% |
| CTCAAGTGCTCGTACCAGAG+TGG | + | chr4_4:77283359-77283378 | Msa0704780:CDS | 55.0% | |
| GTGTGACTAACTGCGAGCTC+CGG | + | chr4_4:77282756-77282775 | Msa0704780:CDS | 55.0% | |
| CCCAAACCGACTGAACCAGA+AGG | + | chr4_4:77282848-77282867 | Msa0704780:CDS | 55.0% | |
| !! | GCCTTCTGGTTCAGTCGGTT+TGG | - | chr4_4:77282852-77282871 | None:intergenic | 55.0% |
| !! | TTCGCGCCTTCTGGTTCAGT+CGG | - | chr4_4:77282857-77282876 | None:intergenic | 55.0% |
| ! | GATCTGAGAGTGCATAGCCG+CGG | - | chr4_4:77282899-77282918 | None:intergenic | 55.0% |
| !! | GATTATGGCGCCGACTGGAT+CGG | - | chr4_4:77282930-77282949 | None:intergenic | 55.0% |
| !! | GTCTTGATTATGGCGCCGAC+TGG | - | chr4_4:77282935-77282954 | None:intergenic | 55.0% |
| GGAAAGAGTGGCGAAGAAGG+AGG | - | chr4_4:77282996-77283015 | None:intergenic | 55.0% | |
| GCAGATGGTGTTTGCAGCGA+CGG | + | chr4_4:77283218-77283237 | Msa0704780:intron | 55.0% | |
| !! | GGAGTTGGTGACGGGGAATT+CGG | + | chr4_4:77283248-77283267 | Msa0704780:CDS | 55.0% |
| !! | TGACGGGGAATTCGGTGTTC+AGG | + | chr4_4:77283256-77283275 | Msa0704780:CDS | 55.0% |
| !! | ATTGCAGGGATAACGGAGGC+GGG | + | chr4_4:77283288-77283307 | Msa0704780:CDS | 55.0% |
| ! | GAGGCGGGTGGGATTTGTTT+GGG | + | chr4_4:77283303-77283322 | Msa0704780:CDS | 55.0% |
| ! | GGGTGGGATTTGTTTGGGTG+CGG | + | chr4_4:77283308-77283327 | Msa0704780:CDS | 55.0% |
| CTCAAGTGCTCGTACCAGAG+TGG | + | chr4_4:77283359-77283378 | Msa0704780:CDS | 55.0% | |
| !!! | CTGACCAGGTTTTCTGGGGC+GGG | - | chr4_4:77282807-77282826 | None:intergenic | 60.0% |
| !! | CCTGACCAGGTTTTCTGGGG+CGG | - | chr4_4:77282808-77282827 | None:intergenic | 60.0% |
| GGTGTTTGCAGCGACGGTGA+CGG | + | chr4_4:77283224-77283243 | Msa0704780:CDS | 60.0% | |
| !! | GGTGACGGTGGAGTTGGTGA+CGG | + | chr4_4:77283239-77283258 | Msa0704780:CDS | 60.0% |
| !! | GTGACGGTGGAGTTGGTGAC+GGG | + | chr4_4:77283240-77283259 | Msa0704780:CDS | 60.0% |
| !! | TGACGGTGGAGTTGGTGACG+GGG | + | chr4_4:77283241-77283260 | Msa0704780:CDS | 60.0% |
| ! | GGAGGCGGGTGGGATTTGTT+TGG | + | chr4_4:77283302-77283321 | Msa0704780:CDS | 60.0% |
| !!! | CTGACCAGGTTTTCTGGGGC+GGG | - | chr4_4:77282807-77282826 | None:intergenic | 60.0% |
| !! | CCTGACCAGGTTTTCTGGGG+CGG | - | chr4_4:77282808-77282827 | None:intergenic | 60.0% |
| GGTGTTTGCAGCGACGGTGA+CGG | + | chr4_4:77283224-77283243 | Msa0704780:CDS | 60.0% | |
| !! | GGTGACGGTGGAGTTGGTGA+CGG | + | chr4_4:77283239-77283258 | Msa0704780:CDS | 60.0% |
| !! | GTGACGGTGGAGTTGGTGAC+GGG | + | chr4_4:77283240-77283259 | Msa0704780:CDS | 60.0% |
| !! | TGACGGTGGAGTTGGTGACG+GGG | + | chr4_4:77283241-77283260 | Msa0704780:CDS | 60.0% |
| ! | GGAGGCGGGTGGGATTTGTT+TGG | + | chr4_4:77283302-77283321 | Msa0704780:CDS | 60.0% |
| CGTTCCCGCCCCAGAAAACC+TGG | + | chr4_4:77282800-77282819 | Msa0704780:CDS | 65.0% | |
| CCGCCCCAGAAAACCTGGTC+AGG | + | chr4_4:77282805-77282824 | Msa0704780:CDS | 65.0% | |
| TGTTACCATGGCGAGGCGGC+CGG | - | chr4_4:77283065-77283084 | None:intergenic | 65.0% | |
| ! | GTTTGCAGCGACGGTGACGG+TGG | + | chr4_4:77283227-77283246 | Msa0704780:CDS | 65.0% |
| ! | AGCGACGGTGACGGTGGAGT+TGG | + | chr4_4:77283233-77283252 | Msa0704780:CDS | 65.0% |
| !! | CAGGGATAACGGAGGCGGGT+GGG | + | chr4_4:77283292-77283311 | Msa0704780:CDS | 65.0% |
| CGTTCCCGCCCCAGAAAACC+TGG | + | chr4_4:77282800-77282819 | Msa0704780:CDS | 65.0% | |
| CCGCCCCAGAAAACCTGGTC+AGG | + | chr4_4:77282805-77282824 | Msa0704780:CDS | 65.0% | |
| TGTTACCATGGCGAGGCGGC+CGG | - | chr4_4:77283065-77283084 | None:intergenic | 65.0% | |
| ! | GTTTGCAGCGACGGTGACGG+TGG | + | chr4_4:77283227-77283246 | Msa0704780:CDS | 65.0% |
| ! | AGCGACGGTGACGGTGGAGT+TGG | + | chr4_4:77283233-77283252 | Msa0704780:CDS | 65.0% |
| !! | CAGGGATAACGGAGGCGGGT+GGG | + | chr4_4:77283292-77283311 | Msa0704780:CDS | 65.0% |
| !! | GCAGGGATAACGGAGGCGGG+TGG | + | chr4_4:77283291-77283310 | Msa0704780:CDS | 70.0% |
| !! | GCAGGGATAACGGAGGCGGG+TGG | + | chr4_4:77283291-77283310 | Msa0704780:CDS | 70.0% |
| CATCTCCGGCCGCCTCGCCA+TGG | + | chr4_4:77283057-77283076 | Msa0704780:CDS | 75.0% | |
| CATCTCCGGCCGCCTCGCCA+TGG | + | chr4_4:77283057-77283076 | Msa0704780:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 77282540 | 77283795 | 77282540 | ID=Msa0704780;Name=Msa0704780 |
| chr4_4 | mRNA | 77282540 | 77283795 | 77282540 | ID=Msa0704780-mRNA-1;Parent=Msa0704780;Name=Msa0704780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=200|1|1|1|1|1|2|316|198 |
| chr4_4 | exon | 77282540 | 77283078 | 77282540 | ID=Msa0704780-mRNA-1:exon:24409;Parent=Msa0704780-mRNA-1 |
| chr4_4 | exon | 77283222 | 77283795 | 77283222 | ID=Msa0704780-mRNA-1:exon:24410;Parent=Msa0704780-mRNA-1 |
| chr4_4 | five_prime_UTR | 77282540 | 77282739 | 77282540 | ID=Msa0704780-mRNA-1:five_prime_utr;Parent=Msa0704780-mRNA-1 |
| chr4_4 | CDS | 77282740 | 77283078 | 77282740 | ID=Msa0704780-mRNA-1:cds;Parent=Msa0704780-mRNA-1 |
| chr4_4 | CDS | 77283222 | 77283479 | 77283222 | ID=Msa0704780-mRNA-1:cds;Parent=Msa0704780-mRNA-1 |
| chr4_4 | three_prime_UTR | 77283480 | 77283795 | 77283480 | ID=Msa0704780-mRNA-1:three_prime_utr;Parent=Msa0704780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
