Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302310 | AES67610.1 | 96.503 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302310 | G7IHP7 | 96.503 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa0302310 | 0.833902 | 4.083730e-56 | -8.615850e-47 |
| Msa0041780 | Msa0302310 | 0.830263 | 3.240670e-55 | -8.615850e-47 |
| Msa0044780 | Msa0302310 | 0.804847 | 1.774611e-49 | -8.615850e-47 |
| Msa0045620 | Msa0302310 | -0.828062 | 1.107812e-54 | -8.615850e-47 |
| Msa0050320 | Msa0302310 | 0.826388 | 2.788638e-54 | -8.615850e-47 |
| Msa0073270 | Msa0302310 | -0.802856 | 4.599509e-49 | -8.615850e-47 |
| Msa0085580 | Msa0302310 | 0.824128 | 9.545027e-54 | -8.615850e-47 |
| Msa0091090 | Msa0302310 | 0.832656 | 8.346851e-56 | -8.615850e-47 |
| Msa0096570 | Msa0302310 | 0.811467 | 6.900620e-51 | -8.615850e-47 |
| Msa0117300 | Msa0302310 | 0.821838 | 3.263822e-53 | -8.615850e-47 |
| Msa0154720 | Msa0302310 | 0.825419 | 4.736942e-54 | -8.615850e-47 |
| Msa0160650 | Msa0302310 | 0.844733 | 6.295627e-59 | -8.615850e-47 |
| Msa0183200 | Msa0302310 | 0.829835 | 4.121767e-55 | -8.615850e-47 |
| Msa0188500 | Msa0302310 | 0.866108 | 3.626896e-65 | -8.615850e-47 |
| Msa0220410 | Msa0302310 | 0.810498 | 1.118590e-50 | -8.615850e-47 |
| Msa0223190 | Msa0302310 | 0.985381 | 2.163276e-163 | -8.615850e-47 |
| Msa0225880 | Msa0302310 | 0.827337 | 1.653903e-54 | -8.615850e-47 |
| Msa0229750 | Msa0302310 | 0.831793 | 1.364529e-55 | -8.615850e-47 |
| Msa0230980 | Msa0302310 | 0.846715 | 1.824515e-59 | -8.615850e-47 |
| Msa0243820 | Msa0302310 | 0.802989 | 4.316811e-49 | -8.615850e-47 |
| Msa0256410 | Msa0302310 | 0.815136 | 1.078718e-51 | -8.615850e-47 |
| Msa0260470 | Msa0302310 | 0.826459 | 2.681064e-54 | -8.615850e-47 |
| Msa0264240 | Msa0302310 | 0.828591 | 8.257598e-55 | -8.615850e-47 |
| Msa0264420 | Msa0302310 | 0.988631 | 8.805042e-175 | -8.615850e-47 |
| Msa0270460 | Msa0302310 | 0.847175 | 1.365532e-59 | -8.615850e-47 |
| Msa0274950 | Msa0302310 | -0.812042 | 5.172438e-51 | -8.615850e-47 |
| Msa0302310 | Msa0304110 | 0.817948 | 2.530183e-52 | -8.615850e-47 |
| Msa0302310 | Msa0309060 | 0.830088 | 3.575783e-55 | -8.615850e-47 |
| Msa0302310 | Msa0339560 | 0.838146 | 3.419425e-57 | -8.615850e-47 |
| Msa0302310 | Msa0339670 | 0.991545 | 3.194715e-188 | -8.615850e-47 |
| Msa0302310 | Msa0341190 | 0.809476 | 1.857281e-50 | -8.615850e-47 |
| Msa0302310 | Msa0352640 | 0.825938 | 3.567495e-54 | -8.615850e-47 |
| Msa0302310 | Msa0364010 | 0.841251 | 5.320369e-58 | -8.615850e-47 |
| Msa0302310 | Msa0370350 | 0.808289 | 3.331781e-50 | -8.615850e-47 |
| Msa0302310 | Msa0372990 | 0.814363 | 1.600831e-51 | -8.615850e-47 |
| Msa0302310 | Msa0378670 | 0.821721 | 3.472513e-53 | -8.615850e-47 |
| Msa0302310 | Msa0378700 | 0.817845 | 2.669788e-52 | -8.615850e-47 |
| Msa0302310 | Msa0379500 | 0.800750 | 1.244610e-48 | -8.615850e-47 |
| Msa0302310 | Msa0380590 | -0.806482 | 8.052240e-50 | -8.615850e-47 |
| Msa0302310 | Msa0387740 | 0.825399 | 4.788295e-54 | -8.615850e-47 |
| Msa0302310 | Msa0403720 | 0.856286 | 3.565372e-62 | -8.615850e-47 |
| Msa0302310 | Msa0404180 | 0.813102 | 3.034021e-51 | -8.615850e-47 |
| Msa0302310 | Msa0408160 | 0.817613 | 3.011123e-52 | -8.615850e-47 |
| Msa0302310 | Msa0416390 | -0.823873 | 1.095876e-53 | -8.615850e-47 |
| Msa0302310 | Msa0417850 | 0.803384 | 3.577546e-49 | -8.615850e-47 |
| Msa0302310 | Msa0419420 | 0.802553 | 5.312823e-49 | -8.615850e-47 |
| Msa0302310 | Msa0421390 | 0.835642 | 1.489620e-56 | -8.615850e-47 |
| Msa0302310 | Msa0428330 | 0.821283 | 4.383998e-53 | -8.615850e-47 |
| Msa0302310 | Msa0431940 | 0.825616 | 4.254689e-54 | -8.615850e-47 |
| Msa0302310 | Msa0436600 | 0.838685 | 2.483076e-57 | -8.615850e-47 |
| Msa0302310 | Msa0436610 | 0.829235 | 5.765072e-55 | -8.615850e-47 |
| Msa0302310 | Msa0438680 | 0.806500 | 7.983573e-50 | -8.615850e-47 |
| Msa0302310 | Msa0448400 | 0.815707 | 8.051744e-52 | -8.615850e-47 |
| Msa0302310 | Msa0456480 | 0.806436 | 8.234578e-50 | -8.615850e-47 |
| Msa0302310 | Msa0462980 | -0.813614 | 2.341051e-51 | -8.615850e-47 |
| Msa0302310 | Msa0496460 | 0.847029 | 1.497413e-59 | -8.615850e-47 |
| Msa0302310 | Msa0496470 | 0.857927 | 1.169134e-62 | -8.615850e-47 |
| Msa0302310 | Msa0496570 | 0.855539 | 5.895112e-62 | -8.615850e-47 |
| Msa0302310 | Msa0500420 | -0.804693 | 1.910699e-49 | -8.615850e-47 |
| Msa0302310 | Msa0508580 | -0.817390 | 3.380550e-52 | -8.615850e-47 |
| Msa0302310 | Msa0520810 | 0.838567 | 2.664149e-57 | -8.615850e-47 |
| Msa0302310 | Msa0521940 | -0.810821 | 9.527269e-51 | -8.615850e-47 |
| Msa0302310 | Msa0546370 | 0.856335 | 3.449021e-62 | -8.615850e-47 |
| Msa0302310 | Msa0549330 | 0.810193 | 1.301726e-50 | -8.615850e-47 |
| Msa0302310 | Msa0555510 | 0.818614 | 1.787809e-52 | -8.615850e-47 |
| Msa0302310 | Msa0560370 | 0.817654 | 2.947589e-52 | -8.615850e-47 |
| Msa0302310 | Msa0568290 | 0.812867 | 3.414929e-51 | -8.615850e-47 |
| Msa0302310 | Msa0568460 | 0.809089 | 2.247949e-50 | -8.615850e-47 |
| Msa0302310 | Msa0572270 | 0.814165 | 1.770528e-51 | -8.615850e-47 |
| Msa0302310 | Msa0580540 | 0.803028 | 4.237568e-49 | -8.615850e-47 |
| Msa0302310 | Msa0604640 | 0.838225 | 3.262702e-57 | -8.615850e-47 |
| Msa0302310 | Msa0608940 | 0.826903 | 2.101372e-54 | -8.615850e-47 |
| Msa0302310 | Msa0619320 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa0302310 | Msa0623310 | -0.824850 | 6.456723e-54 | -8.615850e-47 |
| Msa0302310 | Msa0623360 | 0.848752 | 5.017520e-60 | -8.615850e-47 |
| Msa0302310 | Msa0630850 | 0.856923 | 2.316187e-62 | -8.615850e-47 |
| Msa0302310 | Msa0643020 | -0.805585 | 1.243285e-49 | -8.615850e-47 |
| Msa0302310 | Msa0649530 | 0.815304 | 9.899051e-52 | -8.615850e-47 |
| Msa0302310 | Msa0655610 | 0.814621 | 1.403809e-51 | -8.615850e-47 |
| Msa0302310 | Msa0659020 | 0.824909 | 6.251310e-54 | -8.615850e-47 |
| Msa0302310 | Msa0680370 | -0.802939 | 4.421555e-49 | -8.615850e-47 |
| Msa0302310 | Msa0680450 | -0.809701 | 1.661304e-50 | -8.615850e-47 |
| Msa0302310 | Msa0681880 | 0.857261 | 1.841569e-62 | -8.615850e-47 |
| Msa0302310 | Msa0685390 | 0.822723 | 2.033987e-53 | -8.615850e-47 |
| Msa0302310 | Msa0691740 | 0.818854 | 1.577597e-52 | -8.615850e-47 |
| Msa0302310 | Msa0702310 | 0.809524 | 1.813595e-50 | -8.615850e-47 |
| Msa0302310 | Msa0704780 | 0.880411 | 5.613510e-70 | -8.615850e-47 |
| Msa0302310 | Msa0705050 | 0.832692 | 8.174455e-56 | -8.615850e-47 |
| Msa0302310 | Msa0705130 | 0.813715 | 2.224506e-51 | -8.615850e-47 |
| Msa0302310 | Msa0714060 | 0.830104 | 3.543042e-55 | -8.615850e-47 |
| Msa0302310 | Msa0714200 | 0.826322 | 2.891329e-54 | -8.615850e-47 |
| Msa0302310 | Msa0755500 | 0.800623 | 1.321401e-48 | -8.615850e-47 |
| Msa0302310 | Msa0756440 | 0.843972 | 1.008290e-58 | -8.615850e-47 |
| Msa0302310 | Msa0770020 | 0.802663 | 5.041101e-49 | -8.615850e-47 |
| Msa0302310 | Msa0771910 | -0.802540 | 5.345121e-49 | -8.615850e-47 |
| Msa0302310 | Msa0775420 | 0.836822 | 7.468458e-57 | -8.615850e-47 |
| Msa0302310 | Msa0796610 | 0.807380 | 5.199910e-50 | -8.615850e-47 |
| Msa0302310 | Msa0807980 | 0.804763 | 1.847892e-49 | -8.615850e-47 |
| Msa0302310 | Msa0812800 | 0.835582 | 1.543416e-56 | -8.615850e-47 |
| Msa0302310 | Msa0813630 | 0.810582 | 1.073245e-50 | -8.615850e-47 |
| Msa0302310 | Msa0833910 | 0.800822 | 1.203182e-48 | -8.615850e-47 |
| Msa0302310 | Msa0834200 | 0.835342 | 1.774002e-56 | -8.615850e-47 |
| Msa0302310 | Msa0834240 | 0.841159 | 5.628224e-58 | -8.615850e-47 |
| Msa0302310 | Msa0835550 | 0.851361 | 9.328620e-61 | -8.615850e-47 |
| Msa0302310 | Msa0846300 | 0.824471 | 7.929609e-54 | -8.615850e-47 |
| Msa0302310 | Msa0846900 | -0.805331 | 1.405770e-49 | -8.615850e-47 |
| Msa0302310 | Msa0853150 | 0.822067 | 2.887960e-53 | -8.615850e-47 |
| Msa0302310 | Msa0861480 | 0.824772 | 6.735214e-54 | -8.615850e-47 |
| Msa0302310 | Msa0861560 | 0.824069 | 9.855389e-54 | -8.615850e-47 |
| Msa0302310 | Msa0871310 | 0.819340 | 1.222888e-52 | -8.615850e-47 |
| Msa0302310 | Msa0927890 | 0.812721 | 3.675949e-51 | -8.615850e-47 |
| Msa0302310 | Msa0967250 | 0.812438 | 4.240513e-51 | -8.615850e-47 |
| Msa0302310 | Msa0967260 | 0.800589 | 1.342817e-48 | -8.615850e-47 |
| Msa0302310 | Msa0975560 | 0.823278 | 1.509377e-53 | -8.615850e-47 |
| Msa0302310 | Msa0986560 | 0.825956 | 3.533275e-54 | -8.615850e-47 |
| Msa0302310 | Msa0995660 | 0.804552 | 2.045487e-49 | -8.615850e-47 |
| Msa0302310 | Msa0998940 | 0.809740 | 1.629489e-50 | -8.615850e-47 |
| Msa0302310 | Msa0999590 | 0.840961 | 6.343161e-58 | -8.615850e-47 |
| Msa0302310 | Msa1026710 | -0.816554 | 5.209480e-52 | -8.615850e-47 |
| Msa0302310 | Msa1031530 | 0.819252 | 1.280295e-52 | -8.615850e-47 |
| Msa0302310 | Msa1035040 | -0.803522 | 3.348665e-49 | -8.615850e-47 |
| Msa0302310 | Msa1038110 | 0.858218 | 9.580377e-63 | -8.615850e-47 |
| Msa0302310 | Msa1052030 | 0.806483 | 8.047120e-50 | -8.615850e-47 |
| Msa0302310 | Msa1057620 | 0.802190 | 6.310996e-49 | -8.615850e-47 |
| Msa0302310 | Msa1071310 | 0.828346 | 9.461063e-55 | -8.615850e-47 |
| Msa0302310 | Msa1101300 | 0.809812 | 1.572306e-50 | -8.615850e-47 |
| Msa0302310 | Msa1101610 | 0.836854 | 7.332021e-57 | -8.615850e-47 |
| Msa0302310 | Msa1127200 | -0.806809 | 6.867934e-50 | -8.615850e-47 |
| Msa0302310 | Msa1129660 | 0.851809 | 6.969935e-61 | -8.615850e-47 |
| Msa0302310 | Msa1133440 | 0.804459 | 2.138259e-49 | -8.615850e-47 |
| Msa0302310 | Msa1188820 | 0.801303 | 9.595597e-49 | -8.615850e-47 |
| Msa0302310 | Msa1190350 | 0.800409 | 1.461067e-48 | -8.615850e-47 |
| Msa0302310 | Msa1199580 | 0.854937 | 8.823419e-62 | -8.615850e-47 |
| Msa0302310 | Msa1211260 | 0.807655 | 4.545249e-50 | -8.615850e-47 |
| Msa0302310 | Msa1216700 | 0.803600 | 3.227232e-49 | -8.615850e-47 |
| Msa0302310 | Msa1220580 | -0.804762 | 1.849236e-49 | -8.615850e-47 |
| Msa0302310 | Msa1223510 | 0.813265 | 2.793974e-51 | -8.615850e-47 |
| Msa0302310 | Msa1229770 | 0.805024 | 1.630063e-49 | -8.615850e-47 |
| Msa0302310 | Msa1240060 | -0.852461 | 4.547432e-61 | -8.615850e-47 |
| Msa0302310 | Msa1242990 | 0.824933 | 6.171289e-54 | -8.615850e-47 |
| Msa0302310 | Msa1243630 | 0.806413 | 8.327696e-50 | -8.615850e-47 |
| Msa0302310 | Msa1244220 | 0.803248 | 3.817283e-49 | -8.615850e-47 |
| Msa0302310 | Msa1263610 | 0.847327 | 1.240285e-59 | -8.615850e-47 |
| Msa0302310 | Msa1264140 | 0.804303 | 2.304635e-49 | -8.615850e-47 |
| Msa0302310 | Msa1266720 | 0.823600 | 1.269055e-53 | -8.615850e-47 |
| Msa0302310 | Msa1281370 | -0.844018 | 9.804609e-59 | -8.615850e-47 |
| Msa0302310 | Msa1302780 | 0.805309 | 1.420366e-49 | -8.615850e-47 |
| Msa0302310 | Msa1306700 | 0.804032 | 2.623952e-49 | -8.615850e-47 |
| Msa0302310 | Msa1320530 | -0.860748 | 1.663511e-63 | -8.615850e-47 |
| Msa0302310 | Msa1323920 | 0.811238 | 7.736585e-51 | -8.615850e-47 |
| Msa0302310 | Msa1328630 | 0.853135 | 2.919277e-61 | -8.615850e-47 |
| Msa0302310 | Msa1328720 | 0.854035 | 1.608836e-61 | -8.615850e-47 |
| Msa0302310 | Msa1329660 | 0.811503 | 6.778328e-51 | -8.615850e-47 |
| Msa0302310 | Msa1334560 | -0.818710 | 1.700595e-52 | -8.615850e-47 |
| Msa0302310 | Msa1342400 | 0.846416 | 2.201875e-59 | -8.615850e-47 |
| Msa0302310 | Msa1343480 | 0.804372 | 2.229317e-49 | -8.615850e-47 |
| Msa0302310 | Msa1347610 | -0.822185 | 2.712047e-53 | -8.615850e-47 |
| Msa0302310 | Msa1353280 | 0.809603 | 1.744028e-50 | -8.615850e-47 |
| Msa0302310 | Msa1368660 | 0.825281 | 5.107332e-54 | -8.615850e-47 |
| Msa0302310 | Msa1370630 | 0.803158 | 3.983465e-49 | -8.615850e-47 |
| Msa0302310 | Msa1371800 | -0.830131 | 3.489708e-55 | -8.615850e-47 |
| Msa0302310 | Msa1376310 | -0.830920 | 2.237317e-55 | -8.615850e-47 |
| Msa0302310 | Msa1382750 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
| Msa0302310 | Msa1388070 | 0.805081 | 1.585619e-49 | -8.615850e-47 |
| Msa0302310 | Msa1388270 | 0.828670 | 7.902708e-55 | -8.615850e-47 |
| Msa0302310 | Msa1398310 | 0.800016 | 1.756371e-48 | -8.615850e-47 |
| Msa0302310 | Msa1401000 | 0.851482 | 8.622358e-61 | -8.615850e-47 |
| Msa0302310 | Msa1407200 | 0.826176 | 3.131702e-54 | -8.615850e-47 |
| Msa0302310 | Msa1409050 | 0.828316 | 9.621238e-55 | -8.615850e-47 |
| Msa0302310 | Msa1409760 | 0.829036 | 6.442775e-55 | -8.615850e-47 |
| Msa0302310 | Msa1413900 | 0.803986 | 2.682906e-49 | -8.615850e-47 |
| Msa0302310 | Msa1427180 | 0.985004 | 3.092050e-162 | -8.615850e-47 |
| Msa0302310 | Msa1431180 | 0.809409 | 1.919572e-50 | -8.615850e-47 |
| Msa0302310 | Msa1446220 | 0.810832 | 9.473610e-51 | -8.615850e-47 |
| Msa0302310 | Msa1450630 | 0.821908 | 3.144194e-53 | -8.615850e-47 |
| Msa0302310 | Msa1452200 | 0.835807 | 1.353233e-56 | -8.615850e-47 |
| Msa0302310 | Msa1452790 | 0.816068 | 6.691616e-52 | -8.615850e-47 |
| Msa0302310 | Msa1459630 | 0.816376 | 5.710239e-52 | -8.615850e-47 |
| Msa0302310 | Msa1460970 | -0.821736 | 3.444676e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302310 | MtrunA17_Chr2g0328301 | 96.503 | 286 | 10 | 0 | 1 | 286 | 1 | 286 | 0.0 | 575 |
| Msa0302310 | MtrunA17_Chr4g0031681 | 46.667 | 210 | 47 | 5 | 96 | 286 | 261 | 424 | 3.45e-51 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302310 | AT5G59400.1 | 57.931 | 290 | 111 | 4 | 7 | 285 | 6 | 295 | 7.72e-117 | 338 |
| Msa0302310 | AT5G59400.2 | 54.237 | 236 | 97 | 4 | 7 | 231 | 6 | 241 | 1.14e-81 | 247 |
Find 81 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACGGTTGTTTCTGATTT+TGG | 0.096153 | 2_3:-59093044 | None:intergenic |
| TATCAAAATGCATTTAATTT+AGG | 0.174239 | 2_3:+59094241 | Msa0302310:CDS |
| TTTGGTAGACAATGGGTTTA+TGG | 0.211478 | 2_3:+59095464 | Msa0302310:CDS |
| ACACATGGCACTTTGCTCTA+TGG | 0.252132 | 2_3:-59094940 | None:intergenic |
| CTAACCTCTTCTCCACAATT+TGG | 0.256151 | 2_3:-59094536 | None:intergenic |
| CCATGTGTGTGAATGCTTAT+TGG | 0.266944 | 2_3:+59094955 | Msa0302310:CDS |
| AAAGAGCTTCAAGGGTTTCT+TGG | 0.284671 | 2_3:-59093162 | None:intergenic |
| CAGCAATCAACTTCAAGATT+TGG | 0.317400 | 2_3:+59095446 | Msa0302310:intron |
| TAGACATTTAAATGTAATCT+TGG | 0.329454 | 2_3:+59095741 | Msa0302310:three_prime_UTR |
| CCGACAGTTAAAACACTTCA+AGG | 0.341879 | 2_3:+59094473 | Msa0302310:intron |
| TTACAGCTCCCTTTGGCGTC+TGG | 0.345446 | 2_3:-59095510 | None:intergenic |
| TTGGTAGACAATGGGTTTAT+GGG | 0.350926 | 2_3:+59095465 | Msa0302310:CDS |
| TTTCATCTTCCTTCTCTCTT+CGG | 0.366302 | 2_3:+59093068 | Msa0302310:CDS |
| GGTGAATACCATTATCTTCA+TGG | 0.383957 | 2_3:+59094309 | Msa0302310:CDS |
| CCTTGAAGCTCTTTATTCTC+AGG | 0.389886 | 2_3:+59093171 | Msa0302310:CDS |
| CACATGGCACTTTGCTCTAT+GGG | 0.391842 | 2_3:-59094939 | None:intergenic |
| AAGAGCTTCAAGGGTTTCTT+GGG | 0.410172 | 2_3:-59093161 | None:intergenic |
| ACCGAGTGCCATGAAGATAA+TGG | 0.411246 | 2_3:-59094317 | None:intergenic |
| CCTGAGAATAAAGAGCTTCA+AGG | 0.416387 | 2_3:-59093171 | None:intergenic |
| AGAAAATTTACAGCTCCCTT+TGG | 0.418396 | 2_3:-59095517 | None:intergenic |
| GAATGACTTGGCAGCACTAA+AGG | 0.426467 | 2_3:+59094505 | Msa0302310:CDS |
| TCAAACATAAACCAACTTGT+AGG | 0.432749 | 2_3:+59095774 | Msa0302310:three_prime_UTR |
| TTACCTGAGGCAGAAGCAAC+CGG | 0.444107 | 2_3:-59094355 | None:intergenic |
| AGCAACAGCAGCACCGCTTT+AGG | 0.444700 | 2_3:+59092998 | Msa0302310:CDS |
| TATCCGGTTGCTTCTGCCTC+AGG | 0.446058 | 2_3:+59094352 | Msa0302310:CDS |
| TTGGTAGTTCAGCAATGGTT+GGG | 0.456189 | 2_3:+59094191 | Msa0302310:CDS |
| TTCAAGATTTGGTAGACAAT+GGG | 0.459540 | 2_3:+59095457 | Msa0302310:CDS |
| TTTGGTAGTTCAGCAATGGT+TGG | 0.463462 | 2_3:+59094190 | Msa0302310:CDS |
| GAGGACTTAGTTGTGATGCT+TGG | 0.477149 | 2_3:-59094279 | None:intergenic |
| TGCATTTGGTAGTTCAGCAA+TGG | 0.480534 | 2_3:+59094186 | Msa0302310:CDS |
| GGTAACAGTTGAAGCTTAAG+TGG | 0.481788 | 2_3:+59093525 | Msa0302310:intron |
| TTTAATTTAGGATTATCATA+TGG | 0.482685 | 2_3:+59094253 | Msa0302310:CDS |
| CTTCAAGATTTGGTAGACAA+TGG | 0.486758 | 2_3:+59095456 | Msa0302310:CDS |
| CAGTTGAAGCTTAAGTGGTA+TGG | 0.493314 | 2_3:+59093530 | Msa0302310:intron |
| AGGGCAGGAAGATCTGTCTA+TGG | 0.493392 | 2_3:+59094129 | Msa0302310:intron |
| CTGAGAATAAAGAGCTTCAA+GGG | 0.499082 | 2_3:-59093170 | None:intergenic |
| ACCATTATCTTCATGGCACT+CGG | 0.500659 | 2_3:+59094316 | Msa0302310:CDS |
| GCGTAAATCCAGACGCCAAA+GGG | 0.509490 | 2_3:+59095502 | Msa0302310:CDS |
| AATGACTTGGCAGCACTAAA+GGG | 0.512532 | 2_3:+59094506 | Msa0302310:CDS |
| GGTCCATCTTGTATATATGT+TGG | 0.512587 | 2_3:+59093121 | Msa0302310:CDS |
| TTAAAACACTTCAAGGCTTG+TGG | 0.533051 | 2_3:+59094480 | Msa0302310:CDS |
| GGAGTTGATATGTCAATCAC+TGG | 0.535633 | 2_3:+59095658 | Msa0302310:three_prime_UTR |
| TTATGTTATTACCTCAACTT+CGG | 0.535679 | 2_3:-59094987 | None:intergenic |
| AGGATACTTCACAACTGACT+TGG | 0.542875 | 2_3:-59093555 | None:intergenic |
| TCTTGGGTGGCAGTTTGAAG+AGG | 0.543205 | 2_3:-59093145 | None:intergenic |
| AGGCTTGTGGAGGAATGACT+TGG | 0.547292 | 2_3:+59094493 | Msa0302310:CDS |
| GGAATTTCGCACCGAAGTTG+AGG | 0.547885 | 2_3:+59094976 | Msa0302310:CDS |
| ACCTGCGACGACCGTCCTCA+TGG | 0.549456 | 2_3:+59093100 | Msa0302310:CDS |
| AACATGTCATCAACTATCAA+AGG | 0.550328 | 2_3:-59093405 | None:intergenic |
| GGCAGAGATCCGAAGAGAGA+AGG | 0.551019 | 2_3:-59093077 | None:intergenic |
| ACCATGAGGACGGTCGTCGC+AGG | 0.551432 | 2_3:-59093101 | None:intergenic |
| GCAGCACCGCTTTAGGTGGA+TGG | 0.553063 | 2_3:+59093005 | Msa0302310:CDS |
| GGACCAACATATATACAAGA+TGG | 0.557422 | 2_3:-59093124 | None:intergenic |
| AGCTTCAAGGGTTTCTTGGG+TGG | 0.559365 | 2_3:-59093158 | None:intergenic |
| ATGGTATTCACCATGAAAAG+AGG | 0.559608 | 2_3:-59094298 | None:intergenic |
| ATGTCCAAATTGTGGAGAAG+AGG | 0.561187 | 2_3:+59094532 | Msa0302310:CDS |
| GCACTTATAGTTAGCAAGGA+AGG | 0.562526 | 2_3:+59095637 | Msa0302310:three_prime_UTR |
| AAGGGTTCATGTCCAAATTG+TGG | 0.563160 | 2_3:+59094524 | Msa0302310:CDS |
| TTGTGCACTTATAGTTAGCA+AGG | 0.574225 | 2_3:+59095633 | Msa0302310:three_prime_UTR |
| CACCGTCCATCCACCTAAAG+CGG | 0.577414 | 2_3:-59093011 | None:intergenic |
| CACCGCTTTAGGTGGATGGA+CGG | 0.580229 | 2_3:+59093009 | Msa0302310:CDS |
| TGCGTAAATCCAGACGCCAA+AGG | 0.585411 | 2_3:+59095501 | Msa0302310:CDS |
| ACAAACACATATGAACATGT+TGG | 0.585580 | 2_3:+59092967 | Msa0302310:exon |
| TGCATTTGTAAGAACAGACA+AGG | 0.588695 | 2_3:+59094904 | Msa0302310:CDS |
| AAACACTTCAAGGCTTGTGG+AGG | 0.598739 | 2_3:+59094483 | Msa0302310:CDS |
| ATGAGGACGGTCGTCGCAGG+TGG | 0.602794 | 2_3:-59093098 | None:intergenic |
| CTAACTATAAGTGCACAAGT+TGG | 0.603492 | 2_3:-59095628 | None:intergenic |
| AAGTTGATGCTGCAAAACAT+TGG | 0.603833 | 2_3:-59094214 | None:intergenic |
| AACAGCAGCACCGCTTTAGG+TGG | 0.608229 | 2_3:+59093001 | Msa0302310:CDS |
| ATCCTCGTTGCAGTATCAGA+AGG | 0.615303 | 2_3:+59093573 | Msa0302310:CDS |
| CCAATAAGCATTCACACACA+TGG | 0.617576 | 2_3:-59094955 | None:intergenic |
| AATCACCTCAGCATCAGCAT+AGG | 0.620614 | 2_3:-59093603 | None:intergenic |
| TGACATGTTTGATAGAGTAG+AGG | 0.624434 | 2_3:+59093419 | Msa0302310:CDS |
| GCAAGGGATGCATATTACAA+AGG | 0.629849 | 2_3:+59093378 | Msa0302310:CDS |
| GGCGTCTGGATTTACGCACA+AGG | 0.641633 | 2_3:-59095496 | None:intergenic |
| TACAAGATGGACCATGAGGA+CGG | 0.641757 | 2_3:-59093111 | None:intergenic |
| ATCAACCTATGCTGATGCTG+AGG | 0.651620 | 2_3:+59093598 | Msa0302310:CDS |
| ACATGGCACTTTGCTCTATG+GGG | 0.653009 | 2_3:-59094938 | None:intergenic |
| AGAAGGAAGATGAAACAGAA+CGG | 0.670572 | 2_3:-59093060 | None:intergenic |
| TATATACAAGATGGACCATG+AGG | 0.716840 | 2_3:-59093115 | None:intergenic |
| TGCCTTCTGATACTGCAACG+AGG | 0.764708 | 2_3:-59093575 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATAAAACTATTTTC+AGG | - | chr2_3:59093871-59093890 | None:intergenic | 10.0% |
| !!! | GAAAATAGTTTTATTAAAAT+TGG | + | chr2_3:59093871-59093890 | Msa0302310:intron | 10.0% |
| !! | ATAAAAAGTTAAAATTTGTA+AGG | - | chr2_3:59094412-59094431 | None:intergenic | 10.0% |
| !! | TAAAGAAAAAAATAATACTT+TGG | + | chr2_3:59095142-59095161 | Msa0302310:intron | 10.0% |
| !!! | CATTTTGAAAATTTTTTTTT+TGG | + | chr2_3:59095246-59095265 | Msa0302310:intron | 10.0% |
| !!! | ATTGAGAATTATTTTAAACA+TGG | + | chr2_3:59093334-59093353 | Msa0302310:intron | 15.0% |
| !! | ATCTTATGTTATTCATATTA+TGG | + | chr2_3:59093504-59093523 | Msa0302310:intron | 15.0% |
| !!! | TTTTATTAAAATTGGTTTTG+CGG | + | chr2_3:59093879-59093898 | Msa0302310:intron | 15.0% |
| !! | TAATAAATATTACATTCATC+TGG | + | chr2_3:59094018-59094037 | Msa0302310:intron | 15.0% |
| !!! | TATCAAAATGCATTTAATTT+AGG | + | chr2_3:59094241-59094260 | Msa0302310:CDS | 15.0% |
| !!! | TTTAATTTAGGATTATCATA+TGG | + | chr2_3:59094253-59094272 | Msa0302310:CDS | 15.0% |
| !! | TGTAACATAATATTAATTGA+AGG | + | chr2_3:59095171-59095190 | Msa0302310:intron | 15.0% |
| !! | GTAACATAATATTAATTGAA+GGG | + | chr2_3:59095172-59095191 | Msa0302310:intron | 15.0% |
| !! | TAATCATATGTGAAATTAAA+TGG | - | chr2_3:59095348-59095367 | None:intergenic | 15.0% |
| !! | GAATAACATAAGATTAAGAT+CGG | - | chr2_3:59093498-59093517 | None:intergenic | 20.0% |
| !!! | GTTGTTTGTTTTATTGAAAA+AGG | + | chr2_3:59094697-59094716 | Msa0302310:intron | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | - | chr2_3:59095108-59095127 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | + | chr2_3:59095107-59095126 | Msa0302310:intron | 20.0% |
| !!! | ACTATGATTTTTCAATAGTA+AGG | + | chr2_3:59095543-59095562 | Msa0302310:three_prime_UTR | 20.0% |
| !! | TAGACATTTAAATGTAATCT+TGG | + | chr2_3:59095741-59095760 | Msa0302310:three_prime_UTR | 20.0% |
| !!! | GAATTATTTTAAACATGGCA+TGG | + | chr2_3:59093339-59093358 | Msa0302310:intron | 25.0% |
| !! | TGGTGAATTTTCATCAATAA+GGG | - | chr2_3:59093675-59093694 | None:intergenic | 25.0% |
| !! | TTGGTGAATTTTCATCAATA+AGG | - | chr2_3:59093676-59093695 | None:intergenic | 25.0% |
| ! | TAAGTATAAGCAACTGAAAT+TGG | - | chr2_3:59093695-59093714 | None:intergenic | 25.0% |
| !!! | ATACTTAAGTTTTAGTTGCA+TGG | + | chr2_3:59093708-59093727 | Msa0302310:intron | 25.0% |
| ! | ATAATGCAAAGAATGCATAT+TGG | + | chr2_3:59093771-59093790 | Msa0302310:intron | 25.0% |
| ! | TAATGCAAAGAATGCATATT+GGG | + | chr2_3:59093772-59093791 | Msa0302310:intron | 25.0% |
| !!! | GAATGTTTTTGTTTTCGAAA+AGG | + | chr2_3:59093930-59093949 | Msa0302310:intron | 25.0% |
| ! | ACTACCAAATGCAAAAAATA+AGG | - | chr2_3:59094179-59094198 | None:intergenic | 25.0% |
| ! | TATGAAAGACTACAAAGTTT+GGG | - | chr2_3:59094570-59094589 | None:intergenic | 25.0% |
| ! | TTATGTTATTACCTCAACTT+CGG | - | chr2_3:59094990-59095009 | None:intergenic | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | - | chr2_3:59095235-59095254 | None:intergenic | 25.0% |
| !!! | ATTGTTTTACTTCTTGCAAA+AGG | + | chr2_3:59095302-59095321 | Msa0302310:intron | 25.0% |
| !!! | AAAAGGCATTTCATAACATT+AGG | + | chr2_3:59095319-59095338 | Msa0302310:intron | 25.0% |
| !!! | GATTTTTCAATAGTAAGGAA+AGG | + | chr2_3:59095548-59095567 | Msa0302310:three_prime_UTR | 25.0% |
| ACAAACACATATGAACATGT+TGG | + | chr2_3:59092967-59092986 | Msa0302310:exon | 30.0% | |
| AACATGTCATCAACTATCAA+AGG | - | chr2_3:59093408-59093427 | None:intergenic | 30.0% | |
| ! | AAGAAGTTAAGAAGCATATG+TGG | - | chr2_3:59093466-59093485 | None:intergenic | 30.0% |
| GCATTCTTTGCATTATTAAG+AGG | - | chr2_3:59093767-59093786 | None:intergenic | 30.0% | |
| AATGCAAAGAATGCATATTG+GGG | + | chr2_3:59093773-59093792 | Msa0302310:intron | 30.0% | |
| !!! | TTTTCAGGTCTAATCAATGT+AGG | - | chr2_3:59093856-59093875 | None:intergenic | 30.0% |
| CAAGAATAGAGAAAAGAGAA+GGG | - | chr2_3:59094075-59094094 | None:intergenic | 30.0% | |
| CGTCTTAATATTGAATGATG+TGG | + | chr2_3:59094102-59094121 | Msa0302310:intron | 30.0% | |
| ATATTGAATGATGTGGATGT+AGG | + | chr2_3:59094109-59094128 | Msa0302310:intron | 30.0% | |
| TATTGAATGATGTGGATGTA+GGG | + | chr2_3:59094110-59094129 | Msa0302310:intron | 30.0% | |
| !!! | TGGACCTTATTTTTTGCATT+TGG | + | chr2_3:59094172-59094191 | Msa0302310:CDS | 30.0% |
| ATATGAAAAGTAGCAGCAAA+AGG | - | chr2_3:59094385-59094404 | None:intergenic | 30.0% | |
| !!! | TGTTTTAACTGTCGGAAAAA+AGG | - | chr2_3:59094468-59094487 | None:intergenic | 30.0% |
| ATGAAAGACTACAAAGTTTG+GGG | - | chr2_3:59094569-59094588 | None:intergenic | 30.0% | |
| CTATGAAAGACTACAAAGTT+TGG | - | chr2_3:59094571-59094590 | None:intergenic | 30.0% | |
| CTTTGACTAATGATCTTGTT+TGG | + | chr2_3:59094612-59094631 | Msa0302310:intron | 30.0% | |
| TTGCTTATCGAATAAGTGTT+CGG | - | chr2_3:59094651-59094670 | None:intergenic | 30.0% | |
| TTAAAATTGTCTGAGTGAGT+TGG | + | chr2_3:59094860-59094879 | Msa0302310:intron | 30.0% | |
| TTCTTACAAATGCAAATACC+TGG | - | chr2_3:59094898-59094917 | None:intergenic | 30.0% | |
| !! | AAGCGACACTCATTTTTAAA+CGG | - | chr2_3:59095025-59095044 | None:intergenic | 30.0% |
| CAACAAACCAATAGTTGATT+AGG | - | chr2_3:59095117-59095136 | None:intergenic | 30.0% | |
| ! | TTCAAGATTTGGTAGACAAT+GGG | + | chr2_3:59095457-59095476 | Msa0302310:CDS | 30.0% |
| !!! | AGAACGGTTGTTTCTGATTT+TGG | - | chr2_3:59093047-59093066 | None:intergenic | 35.0% |
| AGAAGGAAGATGAAACAGAA+CGG | - | chr2_3:59093063-59093082 | None:intergenic | 35.0% | |
| TTTCATCTTCCTTCTCTCTT+CGG | + | chr2_3:59093068-59093087 | Msa0302310:CDS | 35.0% | |
| TATATACAAGATGGACCATG+AGG | - | chr2_3:59093118-59093137 | None:intergenic | 35.0% | |
| GGTCCATCTTGTATATATGT+TGG | + | chr2_3:59093121-59093140 | Msa0302310:CDS | 35.0% | |
| GGACCAACATATATACAAGA+TGG | - | chr2_3:59093127-59093146 | None:intergenic | 35.0% | |
| CTGAGAATAAAGAGCTTCAA+GGG | - | chr2_3:59093173-59093192 | None:intergenic | 35.0% | |
| GCGCTTATGCTTAATTAAGT+TGG | + | chr2_3:59093261-59093280 | Msa0302310:intron | 35.0% | |
| TGATCTTTGCTAATAGGCAA+GGG | + | chr2_3:59093362-59093381 | Msa0302310:intron | 35.0% | |
| TGACATGTTTGATAGAGTAG+AGG | + | chr2_3:59093419-59093438 | Msa0302310:CDS | 35.0% | |
| ! | AGAAGCATATGTGGTGAATT+GGG | - | chr2_3:59093457-59093476 | None:intergenic | 35.0% |
| ! | AAGAAGCATATGTGGTGAAT+TGG | - | chr2_3:59093458-59093477 | None:intergenic | 35.0% |
| AATGATGTTGGATCTTCATG+TGG | + | chr2_3:59093798-59093817 | Msa0302310:intron | 35.0% | |
| ! | TTCATCTGGTTAGAGTGTTA+AGG | + | chr2_3:59094032-59094051 | Msa0302310:intron | 35.0% |
| AGAAAAGAGAAGGGAAAAAG+GGG | - | chr2_3:59094066-59094085 | None:intergenic | 35.0% | |
| GAGAAAAGAGAAGGGAAAAA+GGG | - | chr2_3:59094067-59094086 | None:intergenic | 35.0% | |
| AGAGAAAAGAGAAGGGAAAA+AGG | - | chr2_3:59094068-59094087 | None:intergenic | 35.0% | |
| CCAAGAATAGAGAAAAGAGA+AGG | - | chr2_3:59094076-59094095 | None:intergenic | 35.0% | |
| ! | CCTTCTCTTTTCTCTATTCT+TGG | + | chr2_3:59094073-59094092 | Msa0302310:intron | 35.0% |
| !! | AAGTTGATGCTGCAAAACAT+TGG | - | chr2_3:59094217-59094236 | None:intergenic | 35.0% |
| ! | AATGTTTTGCAGCATCAACT+TGG | + | chr2_3:59094216-59094235 | Msa0302310:CDS | 35.0% |
| ! | ACAACTAAGTCCTCTTTTCA+TGG | + | chr2_3:59094288-59094307 | Msa0302310:CDS | 35.0% |
| ATGGTATTCACCATGAAAAG+AGG | - | chr2_3:59094301-59094320 | None:intergenic | 35.0% | |
| GGTGAATACCATTATCTTCA+TGG | + | chr2_3:59094309-59094328 | Msa0302310:CDS | 35.0% | |
| ! | AGCAAAAGGATTTTTACCTG+AGG | - | chr2_3:59094371-59094390 | None:intergenic | 35.0% |
| !!! | CCTTGAAGTGTTTTAACTGT+CGG | - | chr2_3:59094476-59094495 | None:intergenic | 35.0% |
| TTAAAACACTTCAAGGCTTG+TGG | + | chr2_3:59094480-59094499 | Msa0302310:CDS | 35.0% | |
| TGAAAGACTACAAAGTTTGG+GGG | - | chr2_3:59094568-59094587 | None:intergenic | 35.0% | |
| CATAGTCTCCTTAACTTCTT+TGG | + | chr2_3:59094586-59094605 | Msa0302310:intron | 35.0% | |
| CAAAGAAGCCAAAGAAGTTA+AGG | - | chr2_3:59094597-59094616 | None:intergenic | 35.0% | |
| TATGACAGTTAGCAATCTAG+AGG | + | chr2_3:59094755-59094774 | Msa0302310:intron | 35.0% | |
| ATGCAAATACCTGGAAGATA+AGG | - | chr2_3:59094889-59094908 | None:intergenic | 35.0% | |
| TGCATTTGTAAGAACAGACA+AGG | + | chr2_3:59094904-59094923 | Msa0302310:CDS | 35.0% | |
| !! | GACACTCATTTTTAAACGGA+GGG | - | chr2_3:59095021-59095040 | None:intergenic | 35.0% |
| TTCCTTAATCTGTGTGCAAT+TGG | - | chr2_3:59095051-59095070 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr2_3:59095272-59095291 | Msa0302310:intron | 35.0% |
| CAGCAATCAACTTCAAGATT+TGG | + | chr2_3:59095446-59095465 | Msa0302310:intron | 35.0% | |
| ! | CTTCAAGATTTGGTAGACAA+TGG | + | chr2_3:59095456-59095475 | Msa0302310:CDS | 35.0% |
| ! | TTTGGTAGACAATGGGTTTA+TGG | + | chr2_3:59095464-59095483 | Msa0302310:CDS | 35.0% |
| ! | TTGGTAGACAATGGGTTTAT+GGG | + | chr2_3:59095465-59095484 | Msa0302310:CDS | 35.0% |
| AGAAAATTTACAGCTCCCTT+TGG | - | chr2_3:59095520-59095539 | None:intergenic | 35.0% | |
| CTAACTATAAGTGCACAAGT+TGG | - | chr2_3:59095631-59095650 | None:intergenic | 35.0% | |
| TTGTGCACTTATAGTTAGCA+AGG | + | chr2_3:59095633-59095652 | Msa0302310:three_prime_UTR | 35.0% | |
| AAGAGCTTCAAGGGTTTCTT+GGG | - | chr2_3:59093164-59093183 | None:intergenic | 40.0% | |
| AAAGAGCTTCAAGGGTTTCT+TGG | - | chr2_3:59093165-59093184 | None:intergenic | 40.0% | |
| CCTGAGAATAAAGAGCTTCA+AGG | - | chr2_3:59093174-59093193 | None:intergenic | 40.0% | |
| CCTTGAAGCTCTTTATTCTC+AGG | + | chr2_3:59093171-59093190 | Msa0302310:CDS | 40.0% | |
| GCATGGTGATCTTTGCTAAT+AGG | + | chr2_3:59093356-59093375 | Msa0302310:intron | 40.0% | |
| GTGATCTTTGCTAATAGGCA+AGG | + | chr2_3:59093361-59093380 | Msa0302310:intron | 40.0% | |
| GCAAGGGATGCATATTACAA+AGG | + | chr2_3:59093378-59093397 | Msa0302310:CDS | 40.0% | |
| AAGCATATGTGGTGAATTGG+GGG | - | chr2_3:59093455-59093474 | None:intergenic | 40.0% | |
| GAAGCATATGTGGTGAATTG+GGG | - | chr2_3:59093456-59093475 | None:intergenic | 40.0% | |
| GGTAACAGTTGAAGCTTAAG+TGG | + | chr2_3:59093525-59093544 | Msa0302310:intron | 40.0% | |
| CAGTTGAAGCTTAAGTGGTA+TGG | + | chr2_3:59093530-59093549 | Msa0302310:intron | 40.0% | |
| AGGATACTTCACAACTGACT+TGG | - | chr2_3:59093558-59093577 | None:intergenic | 40.0% | |
| ATCAATAAGGGTGATAGCCA+AGG | - | chr2_3:59093663-59093682 | None:intergenic | 40.0% | |
| CATATTGGGGAGAATGATGT+TGG | + | chr2_3:59093786-59093805 | Msa0302310:intron | 40.0% | |
| ! | TTTTTACATTAGCGAGTGCG+TGG | + | chr2_3:59094152-59094171 | Msa0302310:CDS | 40.0% |
| ! | TGCATTTGGTAGTTCAGCAA+TGG | + | chr2_3:59094186-59094205 | Msa0302310:CDS | 40.0% |
| ! | TTTGGTAGTTCAGCAATGGT+TGG | + | chr2_3:59094190-59094209 | Msa0302310:CDS | 40.0% |
| ! | TTGGTAGTTCAGCAATGGTT+GGG | + | chr2_3:59094191-59094210 | Msa0302310:CDS | 40.0% |
| ACCATTATCTTCATGGCACT+CGG | + | chr2_3:59094316-59094335 | Msa0302310:CDS | 40.0% | |
| !! | CGGTTTTGTCATAGGATATC+CGG | + | chr2_3:59094336-59094355 | Msa0302310:CDS | 40.0% |
| CCGACAGTTAAAACACTTCA+AGG | + | chr2_3:59094473-59094492 | Msa0302310:intron | 40.0% | |
| ! | AATGACTTGGCAGCACTAAA+GGG | + | chr2_3:59094506-59094525 | Msa0302310:CDS | 40.0% |
| AAGGGTTCATGTCCAAATTG+TGG | + | chr2_3:59094524-59094543 | Msa0302310:CDS | 40.0% | |
| ATGTCCAAATTGTGGAGAAG+AGG | + | chr2_3:59094532-59094551 | Msa0302310:CDS | 40.0% | |
| CTAACCTCTTCTCCACAATT+TGG | - | chr2_3:59094539-59094558 | None:intergenic | 40.0% | |
| AGTTGGATTCCTTATCTTCC+AGG | + | chr2_3:59094877-59094896 | Msa0302310:intron | 40.0% | |
| CCAATAAGCATTCACACACA+TGG | - | chr2_3:59094958-59094977 | None:intergenic | 40.0% | |
| CCATGTGTGTGAATGCTTAT+TGG | + | chr2_3:59094955-59094974 | Msa0302310:CDS | 40.0% | |
| !! | CGACACTCATTTTTAAACGG+AGG | - | chr2_3:59095022-59095041 | None:intergenic | 40.0% |
| AGCCAATTGCACACAGATTA+AGG | + | chr2_3:59095046-59095065 | Msa0302310:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr2_3:59095276-59095295 | Msa0302310:intron | 40.0% |
| GCACTTATAGTTAGCAAGGA+AGG | + | chr2_3:59095637-59095656 | Msa0302310:three_prime_UTR | 40.0% | |
| !! | GGAGTTGATATGTCAATCAC+TGG | + | chr2_3:59095658-59095677 | Msa0302310:three_prime_UTR | 40.0% |
| TACAAGATGGACCATGAGGA+CGG | - | chr2_3:59093114-59093133 | None:intergenic | 45.0% | |
| ATCCTCGTTGCAGTATCAGA+AGG | + | chr2_3:59093573-59093592 | Msa0302310:CDS | 45.0% | |
| ATCAACCTATGCTGATGCTG+AGG | + | chr2_3:59093598-59093617 | Msa0302310:CDS | 45.0% | |
| AATCACCTCAGCATCAGCAT+AGG | - | chr2_3:59093606-59093625 | None:intergenic | 45.0% | |
| ACTTCTTCTTTGCTCTGCCT+TGG | + | chr2_3:59093643-59093662 | Msa0302310:intron | 45.0% | |
| !! | TGGTTTTGCGGCGTTGAATT+AGG | + | chr2_3:59093891-59093910 | Msa0302310:intron | 45.0% |
| AGAGAAGGGAAAAAGGGGTA+GGG | - | chr2_3:59094061-59094080 | None:intergenic | 45.0% | |
| AAGAGAAGGGAAAAAGGGGT+AGG | - | chr2_3:59094062-59094081 | None:intergenic | 45.0% | |
| GAGGACTTAGTTGTGATGCT+TGG | - | chr2_3:59094282-59094301 | None:intergenic | 45.0% | |
| ACCGAGTGCCATGAAGATAA+TGG | - | chr2_3:59094320-59094339 | None:intergenic | 45.0% | |
| !! | ATGGCACTCGGTTTTGTCAT+AGG | + | chr2_3:59094328-59094347 | Msa0302310:CDS | 45.0% |
| AAACACTTCAAGGCTTGTGG+AGG | + | chr2_3:59094483-59094502 | Msa0302310:CDS | 45.0% | |
| ! | GAATGACTTGGCAGCACTAA+AGG | + | chr2_3:59094505-59094524 | Msa0302310:CDS | 45.0% |
| ACATGGCACTTTGCTCTATG+GGG | - | chr2_3:59094941-59094960 | None:intergenic | 45.0% | |
| CACATGGCACTTTGCTCTAT+GGG | - | chr2_3:59094942-59094961 | None:intergenic | 45.0% | |
| ACACATGGCACTTTGCTCTA+TGG | - | chr2_3:59094943-59094962 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr2_3:59095275-59095294 | Msa0302310:intron | 45.0% |
| TCTTGGGTGGCAGTTTGAAG+AGG | - | chr2_3:59093148-59093167 | None:intergenic | 50.0% | |
| AGCTTCAAGGGTTTCTTGGG+TGG | - | chr2_3:59093161-59093180 | None:intergenic | 50.0% | |
| TGCCTTCTGATACTGCAACG+AGG | - | chr2_3:59093578-59093597 | None:intergenic | 50.0% | |
| GAGAAGGGAAAAAGGGGTAG+GGG | - | chr2_3:59094060-59094079 | None:intergenic | 50.0% | |
| GAATGATGTGGATGTAGGGC+AGG | + | chr2_3:59094114-59094133 | Msa0302310:intron | 50.0% | |
| AGGGCAGGAAGATCTGTCTA+TGG | + | chr2_3:59094129-59094148 | Msa0302310:intron | 50.0% | |
| TTACCTGAGGCAGAAGCAAC+CGG | - | chr2_3:59094358-59094377 | None:intergenic | 50.0% | |
| AGGCTTGTGGAGGAATGACT+TGG | + | chr2_3:59094493-59094512 | Msa0302310:CDS | 50.0% | |
| GGAATTTCGCACCGAAGTTG+AGG | + | chr2_3:59094976-59094995 | Msa0302310:CDS | 50.0% | |
| TGCGTAAATCCAGACGCCAA+AGG | + | chr2_3:59095501-59095520 | Msa0302310:CDS | 50.0% | |
| GCGTAAATCCAGACGCCAAA+GGG | + | chr2_3:59095502-59095521 | Msa0302310:CDS | 50.0% | |
| AGCAACAGCAGCACCGCTTT+AGG | + | chr2_3:59092998-59093017 | Msa0302310:CDS | 55.0% | |
| ! | AACAGCAGCACCGCTTTAGG+TGG | + | chr2_3:59093001-59093020 | Msa0302310:CDS | 55.0% |
| ! | CACCGCTTTAGGTGGATGGA+CGG | + | chr2_3:59093009-59093028 | Msa0302310:CDS | 55.0% |
| CACCGTCCATCCACCTAAAG+CGG | - | chr2_3:59093014-59093033 | None:intergenic | 55.0% | |
| GGCAGAGATCCGAAGAGAGA+AGG | - | chr2_3:59093080-59093099 | None:intergenic | 55.0% | |
| TATCCGGTTGCTTCTGCCTC+AGG | + | chr2_3:59094352-59094371 | Msa0302310:CDS | 55.0% | |
| GGCGTCTGGATTTACGCACA+AGG | - | chr2_3:59095499-59095518 | None:intergenic | 55.0% | |
| TTACAGCTCCCTTTGGCGTC+TGG | - | chr2_3:59095513-59095532 | None:intergenic | 55.0% | |
| ! | GCAGCACCGCTTTAGGTGGA+TGG | + | chr2_3:59093005-59093024 | Msa0302310:CDS | 60.0% |
| ATGAGGACGGTCGTCGCAGG+TGG | - | chr2_3:59093101-59093120 | None:intergenic | 65.0% | |
| ACCTGCGACGACCGTCCTCA+TGG | + | chr2_3:59093100-59093119 | Msa0302310:CDS | 65.0% | |
| ACCATGAGGACGGTCGTCGC+AGG | - | chr2_3:59093104-59093123 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 59092949 | 59095795 | 59092949 | ID=Msa0302310;Name=Msa0302310 |
| chr2_3 | mRNA | 59092949 | 59095795 | 59092949 | ID=Msa0302310-mRNA-1;Parent=Msa0302310;Name=Msa0302310-mRNA-1;_AED=0.18;_eAED=0.18;_QI=28|1|1|1|1|1|7|263|286 |
| chr2_3 | exon | 59092949 | 59093192 | 59092949 | ID=Msa0302310-mRNA-1:exon:19097;Parent=Msa0302310-mRNA-1 |
| chr2_3 | exon | 59093378 | 59093440 | 59093378 | ID=Msa0302310-mRNA-1:exon:19098;Parent=Msa0302310-mRNA-1 |
| chr2_3 | exon | 59093533 | 59093619 | 59093533 | ID=Msa0302310-mRNA-1:exon:19099;Parent=Msa0302310-mRNA-1 |
| chr2_3 | exon | 59094136 | 59094373 | 59094136 | ID=Msa0302310-mRNA-1:exon:19100;Parent=Msa0302310-mRNA-1 |
| chr2_3 | exon | 59094480 | 59094553 | 59094480 | ID=Msa0302310-mRNA-1:exon:19101;Parent=Msa0302310-mRNA-1 |
| chr2_3 | exon | 59094899 | 59094997 | 59094899 | ID=Msa0302310-mRNA-1:exon:19102;Parent=Msa0302310-mRNA-1 |
| chr2_3 | exon | 59095449 | 59095795 | 59095449 | ID=Msa0302310-mRNA-1:exon:19103;Parent=Msa0302310-mRNA-1 |
| chr2_3 | five_prime_UTR | 59092949 | 59092976 | 59092949 | ID=Msa0302310-mRNA-1:five_prime_utr;Parent=Msa0302310-mRNA-1 |
| chr2_3 | CDS | 59092977 | 59093192 | 59092977 | ID=Msa0302310-mRNA-1:cds;Parent=Msa0302310-mRNA-1 |
| chr2_3 | CDS | 59093378 | 59093440 | 59093378 | ID=Msa0302310-mRNA-1:cds;Parent=Msa0302310-mRNA-1 |
| chr2_3 | CDS | 59093533 | 59093619 | 59093533 | ID=Msa0302310-mRNA-1:cds;Parent=Msa0302310-mRNA-1 |
| chr2_3 | CDS | 59094136 | 59094373 | 59094136 | ID=Msa0302310-mRNA-1:cds;Parent=Msa0302310-mRNA-1 |
| chr2_3 | CDS | 59094480 | 59094553 | 59094480 | ID=Msa0302310-mRNA-1:cds;Parent=Msa0302310-mRNA-1 |
| chr2_3 | CDS | 59094899 | 59094997 | 59094899 | ID=Msa0302310-mRNA-1:cds;Parent=Msa0302310-mRNA-1 |
| chr2_3 | CDS | 59095449 | 59095532 | 59095449 | ID=Msa0302310-mRNA-1:cds;Parent=Msa0302310-mRNA-1 |
| chr2_3 | three_prime_UTR | 59095533 | 59095795 | 59095533 | ID=Msa0302310-mRNA-1:three_prime_utr;Parent=Msa0302310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
