Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521730 | XP_013461988.1 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521730 | sp|A7SDW5|EIF3L_NEMVE | 44.208 | 518 | 248 | 10 | 20 | 523 | 35 | 525 | 3.44e-155 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521730 | G7ZWE0 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071640 | Msa0521730 | 0.828043 | 1.119668e-54 | -8.615850e-47 |
| Msa0071760 | Msa0521730 | 0.834356 | 3.142293e-56 | -8.615850e-47 |
| Msa0086160 | Msa0521730 | 0.878076 | 3.762794e-69 | -8.615850e-47 |
| Msa0089540 | Msa0521730 | 0.861058 | 1.339342e-63 | -8.615850e-47 |
| Msa0114600 | Msa0521730 | 0.822458 | 2.343426e-53 | -8.615850e-47 |
| Msa0132460 | Msa0521730 | 0.817714 | 2.857842e-52 | -8.615850e-47 |
| Msa0169710 | Msa0521730 | 0.812056 | 5.135985e-51 | -8.615850e-47 |
| Msa0172300 | Msa0521730 | 0.807709 | 4.428300e-50 | -8.615850e-47 |
| Msa0182050 | Msa0521730 | 0.815818 | 7.606466e-52 | -8.615850e-47 |
| Msa0182100 | Msa0521730 | 0.854065 | 1.576870e-61 | -8.615850e-47 |
| Msa0183840 | Msa0521730 | 0.803908 | 2.785321e-49 | -8.615850e-47 |
| Msa0188740 | Msa0521730 | 0.889145 | 3.147131e-73 | -8.615850e-47 |
| Msa0192300 | Msa0521730 | 0.813485 | 2.500025e-51 | -8.615850e-47 |
| Msa0195030 | Msa0521730 | 0.814673 | 1.366456e-51 | -8.615850e-47 |
| Msa0220410 | Msa0521730 | -0.821422 | 4.072897e-53 | -8.615850e-47 |
| Msa0237180 | Msa0521730 | 0.843719 | 1.178635e-58 | -8.615850e-47 |
| Msa0370350 | Msa0521730 | -0.813991 | 1.933989e-51 | -8.615850e-47 |
| Msa0371490 | Msa0521730 | 0.825629 | 4.222637e-54 | -8.615850e-47 |
| Msa0372100 | Msa0521730 | 0.804256 | 2.356712e-49 | -8.615850e-47 |
| Msa0373350 | Msa0521730 | 0.810289 | 1.241072e-50 | -8.615850e-47 |
| Msa0377370 | Msa0521730 | 0.847380 | 1.199412e-59 | -8.615850e-47 |
| Msa0378620 | Msa0521730 | -0.836404 | 9.545360e-57 | -8.615850e-47 |
| Msa0380590 | Msa0521730 | 0.848495 | 5.910894e-60 | -8.615850e-47 |
| Msa0387290 | Msa0521730 | 0.841686 | 4.087150e-58 | -8.615850e-47 |
| Msa0388520 | Msa0521730 | 0.823886 | 1.087711e-53 | -8.615850e-47 |
| Msa0416470 | Msa0521730 | 0.841860 | 3.677433e-58 | -8.615850e-47 |
| Msa0426940 | Msa0521730 | 0.808564 | 2.911384e-50 | -8.615850e-47 |
| Msa0433060 | Msa0521730 | 0.887436 | 1.429374e-72 | -8.615850e-47 |
| Msa0450150 | Msa0521730 | 0.817065 | 4.000136e-52 | -8.615850e-47 |
| Msa0476730 | Msa0521730 | -0.849004 | 4.271113e-60 | -8.615850e-47 |
| Msa0270160 | Msa0521730 | 0.898668 | 4.234719e-77 | -8.615850e-47 |
| Msa0274940 | Msa0521730 | 0.824988 | 5.987463e-54 | -8.615850e-47 |
| Msa0277600 | Msa0521730 | 0.816769 | 4.661442e-52 | -8.615850e-47 |
| Msa0278540 | Msa0521730 | 0.812093 | 5.042026e-51 | -8.615850e-47 |
| Msa0299540 | Msa0521730 | -0.803782 | 2.958267e-49 | -8.615850e-47 |
| Msa0301250 | Msa0521730 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0313060 | Msa0521730 | 0.833234 | 5.995233e-56 | -8.615850e-47 |
| Msa0315660 | Msa0521730 | 0.836142 | 1.112714e-56 | -8.615850e-47 |
| Msa0500420 | Msa0521730 | 0.843073 | 1.753318e-58 | -8.615850e-47 |
| Msa0511760 | Msa0521730 | 0.813852 | 2.074891e-51 | -8.615850e-47 |
| Msa0521100 | Msa0521730 | -0.823201 | 1.573244e-53 | -8.615850e-47 |
| Msa0521730 | Msa0524680 | 0.886756 | 2.592568e-72 | -8.615850e-47 |
| Msa0521730 | Msa0547920 | 0.842837 | 2.025537e-58 | -8.615850e-47 |
| Msa0521730 | Msa0550490 | 0.818728 | 1.684994e-52 | -8.615850e-47 |
| Msa0521730 | Msa0573550 | 0.828738 | 7.609069e-55 | -8.615850e-47 |
| Msa0521730 | Msa0574780 | 0.811881 | 5.607464e-51 | -8.615850e-47 |
| Msa0521730 | Msa0585570 | 0.806916 | 6.518517e-50 | -8.615850e-47 |
| Msa0521730 | Msa0602900 | 0.855244 | 7.183425e-62 | -8.615850e-47 |
| Msa0521730 | Msa0609120 | 0.838225 | 3.262702e-57 | -8.615850e-47 |
| Msa0521730 | Msa0619230 | 0.801846 | 7.426339e-49 | -8.615850e-47 |
| Msa0521730 | Msa0621190 | 0.812881 | 3.391149e-51 | -8.615850e-47 |
| Msa0521730 | Msa0643960 | 0.854603 | 1.102542e-61 | -8.615850e-47 |
| Msa0521730 | Msa0663400 | 0.810706 | 1.008697e-50 | -8.615850e-47 |
| Msa0521730 | Msa0708630 | 0.819000 | 1.461470e-52 | -8.615850e-47 |
| Msa0521730 | Msa0790450 | 0.885639 | 6.837637e-72 | -8.615850e-47 |
| Msa0521730 | Msa0798590 | 0.809662 | 1.693717e-50 | -8.615850e-47 |
| Msa0521730 | Msa0929700 | 0.845936 | 2.975948e-59 | -8.615850e-47 |
| Msa0521730 | Msa0930890 | 0.817549 | 3.113440e-52 | -8.615850e-47 |
| Msa0521730 | Msa1025200 | 0.836222 | 1.062108e-56 | -8.615850e-47 |
| Msa0521730 | Msa1025220 | 0.845225 | 4.638012e-59 | -8.615850e-47 |
| Msa0521730 | Msa1026710 | 0.838373 | 2.989523e-57 | -8.615850e-47 |
| Msa0521730 | Msa1047020 | 0.827749 | 1.317267e-54 | -8.615850e-47 |
| Msa0521730 | Msa1070810 | 0.822024 | 2.955769e-53 | -8.615850e-47 |
| Msa0521730 | Msa1082050 | 0.808808 | 2.581616e-50 | -8.615850e-47 |
| Msa0521730 | Msa1085850 | 0.894891 | 1.609414e-75 | -8.615850e-47 |
| Msa0521730 | Msa1118790 | 0.817929 | 2.555170e-52 | -8.615850e-47 |
| Msa0521730 | Msa1126690 | 0.829628 | 4.627649e-55 | -8.615850e-47 |
| Msa0521730 | Msa1130680 | 0.830415 | 2.974355e-55 | -8.615850e-47 |
| Msa0521730 | Msa1158630 | 0.822806 | 1.945348e-53 | -8.615850e-47 |
| Msa0521730 | Msa1165210 | 0.846059 | 2.754637e-59 | -8.615850e-47 |
| Msa0521730 | Msa1219760 | 0.831315 | 1.790096e-55 | -8.615850e-47 |
| Msa0521730 | Msa1227350 | 0.819923 | 9.000465e-53 | -8.615850e-47 |
| Msa0521730 | Msa1235950 | 0.841957 | 3.466757e-58 | -8.615850e-47 |
| Msa0521730 | Msa1235980 | 0.840812 | 6.938930e-58 | -8.615850e-47 |
| Msa0521730 | Msa1237040 | 0.807350 | 5.276677e-50 | -8.615850e-47 |
| Msa0521730 | Msa1296090 | 0.803595 | 3.233660e-49 | -8.615850e-47 |
| Msa0521730 | Msa1333370 | 0.810220 | 1.284506e-50 | -8.615850e-47 |
| Msa0521730 | Msa1341780 | 0.834436 | 3.001440e-56 | -8.615850e-47 |
| Msa0521730 | Msa1347610 | 0.863649 | 2.141607e-64 | -8.615850e-47 |
| Msa0521730 | Msa1367540 | 0.819909 | 9.066364e-53 | -8.615850e-47 |
| Msa0521730 | Msa1387750 | 0.810966 | 8.863664e-51 | -8.615850e-47 |
| Msa0521730 | Msa1390760 | 0.809163 | 2.167043e-50 | -8.615850e-47 |
| Msa0521730 | Msa1403520 | 0.898842 | 3.569717e-77 | -8.615850e-47 |
| Msa0521730 | Msa1407550 | 0.819478 | 1.137104e-52 | -8.615850e-47 |
| Msa0521730 | Msa1424570 | 0.804491 | 2.106182e-49 | -8.615850e-47 |
| Msa0521730 | Msa1446510 | 0.854340 | 1.313820e-61 | -8.615850e-47 |
| Msa0521730 | Msa1450560 | 0.881513 | 2.255538e-70 | -8.615850e-47 |
| Msa0521730 | Msa1462580 | 0.829469 | 5.058613e-55 | -8.615850e-47 |
| Msa0521730 | Msa1465700 | 0.826126 | 3.219310e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521730 | MtrunA17_Chr3g0139831 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521730 | AT5G25757.1 | 80.306 | 523 | 86 | 3 | 5 | 526 | 8 | 514 | 0.0 | 869 |
| Msa0521730 | AT5G25754.1 | 80.306 | 523 | 86 | 3 | 5 | 526 | 8 | 514 | 0.0 | 869 |
Find 134 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGAGCCTTCTATGTTAA+TGG | 0.150810 | 3_4:-74692401 | Msa0521730:CDS |
| CTCTTTCAGGTGGTTCTTCA+TGG | 0.182026 | 3_4:-74695910 | Msa0521730:CDS |
| TAATTACTGCAGTCTCTTTC+AGG | 0.198149 | 3_4:-74695923 | Msa0521730:CDS |
| GAATCAATGGCTTTGGGATA+TGG | 0.229252 | 3_4:-74695866 | Msa0521730:CDS |
| AAGTAGATGAACCAACTTTA+AGG | 0.240848 | 3_4:-74692119 | Msa0521730:intron |
| TTATTGCTGAACGCTGTTAA+TGG | 0.257768 | 3_4:-74690993 | Msa0521730:three_prime_UTR |
| TACTAGAGGCTCTTCAAAAC+TGG | 0.270914 | 3_4:+74692941 | None:intergenic |
| GCCGGCAAAGCAAAGTAAAA+AGG | 0.280186 | 3_4:+74691220 | None:intergenic |
| TAGCAATGTCTTGAAAGTTT+TGG | 0.293530 | 3_4:-74694741 | Msa0521730:CDS |
| CGCAGTATCCAAACAGATTA+GGG | 0.294334 | 3_4:+74696309 | None:intergenic |
| TTCATCAACAAGCCTGCTTT+GGG | 0.303001 | 3_4:+74693097 | None:intergenic |
| GGTGTTTACACCATTGTTAT+TGG | 0.316510 | 3_4:-74694620 | Msa0521730:CDS |
| CGCTGAAGGGGTAATAAACT+TGG | 0.322037 | 3_4:+74692965 | None:intergenic |
| CTGAGGGTTCATTGTCTCTT+GGG | 0.323751 | 3_4:-74694695 | Msa0521730:CDS |
| GCTGAGGGTTCATTGTCTCT+TGG | 0.330424 | 3_4:-74694696 | Msa0521730:CDS |
| ATTACCACCATTTACCACTA+TGG | 0.330766 | 3_4:-74694590 | Msa0521730:CDS |
| AGCTTCCGAATCAATGGCTT+TGG | 0.332438 | 3_4:-74695873 | Msa0521730:CDS |
| TTTCATCAACAAGCCTGCTT+TGG | 0.334356 | 3_4:+74693096 | None:intergenic |
| GGAAAGAAGTTTCGTACATT+TGG | 0.342653 | 3_4:+74696115 | None:intergenic |
| GGCAAAACCATAGTGGTAAA+TGG | 0.355256 | 3_4:+74694583 | None:intergenic |
| CCGCAGTATCCAAACAGATT+AGG | 0.356064 | 3_4:+74696308 | None:intergenic |
| GATGTACTTGGCACCCTTAT+CGG | 0.358467 | 3_4:-74691247 | Msa0521730:three_prime_UTR |
| CTTCTTGCGTCAGGTTGTTA+AGG | 0.370724 | 3_4:-74691475 | Msa0521730:intron |
| AAGCAACAACAGTTGTTATC+AGG | 0.387793 | 3_4:-74692204 | Msa0521730:CDS |
| CCTATCTGACCGTTTCTTCA+AGG | 0.387841 | 3_4:-74696088 | Msa0521730:CDS |
| AATAAAGCCATTAACATAGA+AGG | 0.390415 | 3_4:+74692394 | None:intergenic |
| AGAAACGGTCAGATAGGGTT+TGG | 0.394229 | 3_4:+74696094 | None:intergenic |
| TGAACAAATGTATGCGTTGC+TGG | 0.399391 | 3_4:-74693141 | Msa0521730:CDS |
| TATGTTAATGGCTTTATTTG+AGG | 0.401710 | 3_4:-74692389 | Msa0521730:intron |
| GTTGTTGCTTTGCTTCATAA+AGG | 0.402516 | 3_4:+74692217 | None:intergenic |
| CCTGACTGACTAATATCAAT+AGG | 0.413043 | 3_4:+74694641 | None:intergenic |
| TTCAATATCTGTTCATATTG+TGG | 0.422018 | 3_4:+74693170 | None:intergenic |
| ACTGGATCGGGAACGAAGTT+GGG | 0.422123 | 3_4:+74696198 | None:intergenic |
| CTTGTACATCTTTAAGTACA+AGG | 0.428339 | 3_4:-74693210 | Msa0521730:CDS |
| TCTCAGTTGCGAGAGAAGTA+TGG | 0.431894 | 3_4:-74693065 | Msa0521730:CDS |
| CCTATTGATATTAGTCAGTC+AGG | 0.436140 | 3_4:-74694641 | Msa0521730:CDS |
| TTGGGGTATTTCAGTATGGT+TGG | 0.437805 | 3_4:-74694722 | Msa0521730:CDS |
| GACTGGATCGGGAACGAAGT+TGG | 0.438328 | 3_4:+74696197 | None:intergenic |
| GAAGTAATCTCCATACCGTT+TGG | 0.439729 | 3_4:+74691494 | None:intergenic |
| GCTTCCGAATCAATGGCTTT+GGG | 0.440244 | 3_4:-74695872 | Msa0521730:CDS |
| TGCAAAACTTGCAAGTTACA+TGG | 0.442232 | 3_4:-74692142 | Msa0521730:CDS |
| GTCTTGTTTGCAGCTTGAAA+AGG | 0.447914 | 3_4:-74691308 | Msa0521730:intron |
| TCTTCAAAACTGGGCGCTGA+AGG | 0.452512 | 3_4:+74692951 | None:intergenic |
| CCTTGAAGAAACGGTCAGAT+AGG | 0.454544 | 3_4:+74696088 | None:intergenic |
| TGGAGATTACTTCTTGCGTC+AGG | 0.454633 | 3_4:-74691484 | Msa0521730:CDS |
| ATGTAGATTAATGATACGGC+TGG | 0.471148 | 3_4:-74690907 | Msa0521730:three_prime_UTR |
| CCCTCATTTGAAAACATAAG+TGG | 0.471292 | 3_4:+74691093 | None:intergenic |
| AAGAAGTTTCGTACATTTGG+TGG | 0.477971 | 3_4:+74696118 | None:intergenic |
| CTCTGAATCTGCTGTGACAA+TGG | 0.481443 | 3_4:-74696265 | Msa0521730:exon |
| AATATACTTTCAAGAAGGTC+CGG | 0.484004 | 3_4:+74692178 | None:intergenic |
| CAGTATGGTTGGTTTGCTGA+GGG | 0.489529 | 3_4:-74694711 | Msa0521730:CDS |
| TCTCTTGAAACAGTTCGATC+AGG | 0.490945 | 3_4:-74695764 | Msa0521730:intron |
| TGACCTGCGGAGCATAAGAT+TGG | 0.496399 | 3_4:+74694562 | None:intergenic |
| TCAGTATGGTTGGTTTGCTG+AGG | 0.497191 | 3_4:-74694712 | Msa0521730:CDS |
| TGAGCATCACATACTGAGTA+AGG | 0.498577 | 3_4:+74690832 | None:intergenic |
| AAGTCTTGCAACCTTAAAGT+TGG | 0.500427 | 3_4:+74692108 | None:intergenic |
| ATATGCAGCTTCCGAATCAA+TGG | 0.505365 | 3_4:-74695879 | Msa0521730:CDS |
| CTTCAAAACTGGGCGCTGAA+GGG | 0.514443 | 3_4:+74692952 | None:intergenic |
| ACTCATGCTGTTGATAGTGC+TGG | 0.515009 | 3_4:-74691954 | Msa0521730:CDS |
| CGAGATGGACAGTATAAAGC+TGG | 0.519050 | 3_4:-74691278 | Msa0521730:CDS |
| CTCTTGGGTGATTATCACAC+TGG | 0.525249 | 3_4:-74694680 | Msa0521730:CDS |
| GAGAGAGTGAAGGTAGCTTA+CGG | 0.526072 | 3_4:+74696285 | None:intergenic |
| GCTGAAGGGGTAATAAACTT+GGG | 0.527613 | 3_4:+74692966 | None:intergenic |
| TCACACTGGTCTCAAGTGCT+TGG | 0.527814 | 3_4:-74694666 | Msa0521730:CDS |
| ATAGAAATCCACATCAGCAT+TGG | 0.528493 | 3_4:+74691920 | None:intergenic |
| TTGCCAATCTTATGCTCCGC+AGG | 0.528690 | 3_4:-74694565 | Msa0521730:intron |
| ATATCCCAAAGCCATTGATT+CGG | 0.529948 | 3_4:+74695868 | None:intergenic |
| CTTGAAGAAACGGTCAGATA+GGG | 0.530479 | 3_4:+74696089 | None:intergenic |
| ATGGTGTGTCCTTGAAGAAA+CGG | 0.530687 | 3_4:+74696079 | None:intergenic |
| CATCAACAAGCCTGCTTTGG+GGG | 0.533539 | 3_4:+74693099 | None:intergenic |
| TAATCTCCATACCGTTTGGA+AGG | 0.533943 | 3_4:+74691498 | None:intergenic |
| AGTAATATCCAATGCTGATG+TGG | 0.534293 | 3_4:-74691928 | Msa0521730:CDS |
| CTGGAGTGAGTTGATGTACT+TGG | 0.535340 | 3_4:-74691259 | Msa0521730:exon |
| AACAGTTGTTATCAGGTCTC+CGG | 0.535364 | 3_4:-74692197 | Msa0521730:CDS |
| TCTCTCTGATGTGACGGTAG+AGG | 0.537475 | 3_4:+74696157 | None:intergenic |
| TACTCGAGCAGGAGAAGGAA+GGG | 0.539087 | 3_4:-74694808 | Msa0521730:CDS |
| CGAAGTTGGGATCGTAGCCT+AGG | 0.539968 | 3_4:+74696211 | None:intergenic |
| AAATATGTAGATTAATGATA+CGG | 0.540047 | 3_4:-74690911 | Msa0521730:three_prime_UTR |
| GTATTGAGCGACAGCGTCTA+CGG | 0.542427 | 3_4:+74696050 | None:intergenic |
| TGTTGAATATACTTTCAAGA+AGG | 0.551618 | 3_4:+74692173 | None:intergenic |
| TCTAAACCTTCCAAACGGTA+TGG | 0.552675 | 3_4:-74691504 | Msa0521730:CDS |
| TCGATTCTCTGACGAAGCGT+AGG | 0.552849 | 3_4:+74695955 | None:intergenic |
| TTCAAAACTGGGCGCTGAAG+GGG | 0.556525 | 3_4:+74692953 | None:intergenic |
| CGTAGCCTAGGTCTTGAGCT+TGG | 0.560532 | 3_4:+74696223 | None:intergenic |
| TTCGTCAGAGAATCGATTCG+TGG | 0.564246 | 3_4:-74695948 | Msa0521730:CDS |
| AAATGTGAACAAAATTCTGC+CGG | 0.568648 | 3_4:+74691202 | None:intergenic |
| GTCTTCTCTACCGTGAGATG+TGG | 0.569636 | 3_4:-74696005 | Msa0521730:CDS |
| TCAGATACTCGAGCAGGAGA+AGG | 0.571169 | 3_4:-74694813 | Msa0521730:CDS |
| ACTAGAGGCTCTTCAAAACT+GGG | 0.572995 | 3_4:+74692942 | None:intergenic |
| ATACTCGAGCAGGAGAAGGA+AGG | 0.578832 | 3_4:-74694809 | Msa0521730:CDS |
| CATTCTTCTCTCTGATGTGA+CGG | 0.584120 | 3_4:+74696151 | None:intergenic |
| GCAGGACACAATTCATGTTG+TGG | 0.584900 | 3_4:-74691529 | Msa0521730:intron |
| ACAGCGTCTACGGAGGGCCA+TGG | 0.585469 | 3_4:+74696060 | None:intergenic |
| CGTCTCCAAGCTCAAGACCT+AGG | 0.590090 | 3_4:-74696228 | Msa0521730:CDS |
| ACCTGGTTGTAATTTACTAG+AGG | 0.590170 | 3_4:+74692927 | None:intergenic |
| TAAGATTGGCAAAACCATAG+TGG | 0.590299 | 3_4:+74694576 | None:intergenic |
| AATTATTCAGATACTCGAGC+AGG | 0.592977 | 3_4:-74694819 | Msa0521730:CDS |
| AGAAGGCTCAGAGTCAATAG+AGG | 0.593706 | 3_4:+74692411 | None:intergenic |
| TTACTGCAGTCTCTTTCAGG+TGG | 0.600442 | 3_4:-74695920 | Msa0521730:CDS |
| TGAAAAGGTGATCAACGAGA+TGG | 0.601494 | 3_4:-74691293 | Msa0521730:CDS |
| ATTTGAAAACATAAGTGGGT+GGG | 0.604920 | 3_4:+74691098 | None:intergenic |
| TGGAGTCTAAACCTTCCAAA+CGG | 0.607048 | 3_4:-74691509 | Msa0521730:CDS |
| CATTTGAAAACATAAGTGGG+TGG | 0.614613 | 3_4:+74691097 | None:intergenic |
| TGTAGATTAATGATACGGCT+GGG | 0.616631 | 3_4:-74690906 | Msa0521730:three_prime_UTR |
| CATATTGTGGAGACTTCTGA+TGG | 0.618356 | 3_4:+74693183 | None:intergenic |
| TAGGAGTGAGACGAGCATAG+AGG | 0.619056 | 3_4:+74695974 | None:intergenic |
| CCTCATTTGAAAACATAAGT+GGG | 0.621953 | 3_4:+74691094 | None:intergenic |
| TCGTCAGAGAATCGATTCGT+GGG | 0.622796 | 3_4:-74695947 | Msa0521730:CDS |
| GAGTGAGACGAGCATAGAGG+TGG | 0.627092 | 3_4:+74695977 | None:intergenic |
| ACGGCTGGGCCTTTCAAAAG+CGG | 0.627850 | 3_4:-74690892 | Msa0521730:three_prime_UTR |
| GCCTCTAGTAAATTACAACC+AGG | 0.628196 | 3_4:-74692928 | Msa0521730:intron |
| GATGGCTATGATTACAATGG+TGG | 0.631082 | 3_4:-74694764 | Msa0521730:CDS |
| TGAGCGACAGCGTCTACGGA+GGG | 0.640297 | 3_4:+74696054 | None:intergenic |
| TAAGCACAAAGGACAGCTAA+CGG | 0.640998 | 3_4:+74690856 | None:intergenic |
| GGTGGCGAAACCACATCTCA+CGG | 0.647100 | 3_4:+74695995 | None:intergenic |
| GAGCAATTCACTGCAAACGA+TGG | 0.649501 | 3_4:-74694782 | Msa0521730:CDS |
| CCTAATCTGTTTGGATACTG+CGG | 0.649911 | 3_4:-74696308 | Msa0521730:five_prime_UTR |
| TCATCAACAAGCCTGCTTTG+GGG | 0.650115 | 3_4:+74693098 | None:intergenic |
| AGTGGTAAATGGTGGTAATG+TGG | 0.651980 | 3_4:+74694594 | None:intergenic |
| AATGCAACGATATGATGATG+AGG | 0.655375 | 3_4:-74693027 | Msa0521730:CDS |
| GCTGGGCCTTTCAAAAGCGG+AGG | 0.656152 | 3_4:-74690889 | Msa0521730:three_prime_UTR |
| AGCAGATTCAGAGAGAGTGA+AGG | 0.660117 | 3_4:+74696275 | None:intergenic |
| CTGAAGGGGTAATAAACTTG+GGG | 0.662460 | 3_4:+74692967 | None:intergenic |
| TTGAGCGACAGCGTCTACGG+AGG | 0.671373 | 3_4:+74696053 | None:intergenic |
| GTTTCTTCAAGGACACACCA+TGG | 0.673800 | 3_4:-74696077 | Msa0521730:CDS |
| AAAACCATAGTGGTAAATGG+TGG | 0.678504 | 3_4:+74694586 | None:intergenic |
| TAGTATTTGGTATTACACGT+AGG | 0.684066 | 3_4:+74691152 | None:intergenic |
| ACAACGCATCAAAAGAAACA+TGG | 0.687118 | 3_4:+74691033 | None:intergenic |
| GGTAGAGAAGACAGAAGACA+TGG | 0.688600 | 3_4:+74696016 | None:intergenic |
| ACGGTAGAGGTGAACAACGA+AGG | 0.689816 | 3_4:+74696170 | None:intergenic |
| CTGAGTAAGGATAAGCACAA+AGG | 0.699303 | 3_4:+74690845 | None:intergenic |
| ACAGCGTTCAGCAATAAACA+AGG | 0.700897 | 3_4:+74690999 | None:intergenic |
| AACGATGGCTATGATTACAA+TGG | 0.723830 | 3_4:-74694767 | Msa0521730:CDS |
| AATGTGGCATCCAATAACAA+TGG | 0.744265 | 3_4:+74694610 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATAAAAAAAATTATTGA+GGG | + | chr3_4:74693212-74693231 | None:intergenic | 10.0% |
| !! | AGAAATAAAAAAAATTATTG+AGG | + | chr3_4:74693213-74693232 | None:intergenic | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | + | chr3_4:74693372-74693391 | None:intergenic | 10.0% |
| !!! | TCACATTTTAATTTTATTTT+GGG | + | chr3_4:74693395-74693414 | None:intergenic | 10.0% |
| !!! | TTCACATTTTAATTTTATTT+TGG | + | chr3_4:74693396-74693415 | None:intergenic | 10.0% |
| !! | AGTATTTATTTATGTTAAAA+TGG | - | chr3_4:74693582-74693601 | Msa0521730:intron | 10.0% |
| !! | TTATAAATTATTACATTACA+TGG | - | chr3_4:74693844-74693863 | Msa0521730:intron | 10.0% |
| !! | AGTAATTTATATATTAAAAG+GGG | + | chr3_4:74694850-74694869 | None:intergenic | 10.0% |
| !!! | TAAAATTTTTAAATAGTTTC+TGG | - | chr3_4:74695322-74695341 | Msa0521730:intron | 10.0% |
| !!! | AAAATTTTTAAATAGTTTCT+GGG | - | chr3_4:74695323-74695342 | Msa0521730:intron | 10.0% |
| !!! | TTTATTATCTATTTTATCAG+AGG | - | chr3_4:74691467-74691486 | Msa0521730:intron | 15.0% |
| !!! | TTTGAAATATAATTCTACAA+TGG | + | chr3_4:74693001-74693020 | None:intergenic | 15.0% |
| !!! | TAATATGTTTTGAATAAAAG+GGG | + | chr3_4:74693104-74693123 | None:intergenic | 15.0% |
| !!! | CTAATATGTTTTGAATAAAA+GGG | + | chr3_4:74693105-74693124 | None:intergenic | 15.0% |
| !!! | TCTAATATGTTTTGAATAAA+AGG | + | chr3_4:74693106-74693125 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTAACATAAGAG+GGG | + | chr3_4:74693177-74693196 | None:intergenic | 15.0% |
| !!! | GATTTTATTTTAACATAAGA+GGG | + | chr3_4:74693178-74693197 | None:intergenic | 15.0% |
| !!! | AGATTTTATTTTAACATAAG+AGG | + | chr3_4:74693179-74693198 | None:intergenic | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | + | chr3_4:74693373-74693392 | None:intergenic | 15.0% |
| !! | TTTAAATAACCATACTTAAT+CGG | + | chr3_4:74693431-74693450 | None:intergenic | 15.0% |
| !!! | AGTATAAATTTTACTTTTCA+AGG | - | chr3_4:74693674-74693693 | Msa0521730:intron | 15.0% |
| !!! | GTATAAATTTTACTTTTCAA+GGG | - | chr3_4:74693675-74693694 | Msa0521730:intron | 15.0% |
| !! | GTAATTTATATATTAAAAGG+GGG | + | chr3_4:74694849-74694868 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATATTGATCCA+AGG | + | chr3_4:74695073-74695092 | None:intergenic | 15.0% |
| !! | AAATATGTAGATTAATGATA+CGG | - | chr3_4:74696226-74696245 | Msa0521730:CDS | 15.0% |
| !! | TATATGTTCAAAAACATTAT+TGG | + | chr3_4:74696353-74696372 | None:intergenic | 15.0% |
| !! | TGTTTATGCTAGTATATAAA+GGG | + | chr3_4:74691763-74691782 | None:intergenic | 20.0% |
| !!! | ATAAGCTATTTCTATAACAA+AGG | + | chr3_4:74691992-74692011 | None:intergenic | 20.0% |
| !! | TATAGAAATAGCTTATACTT+AGG | - | chr3_4:74691996-74692015 | Msa0521730:intron | 20.0% |
| !! | AAATAAGGTAAAAACAGTTA+TGG | + | chr3_4:74692082-74692101 | None:intergenic | 20.0% |
| !!! | ATATTTTACATAAGCACTTA+AGG | - | chr3_4:74692188-74692207 | Msa0521730:CDS | 20.0% |
| !!! | CTCAAATAAATTAGTTTAGT+TGG | + | chr3_4:74692722-74692741 | None:intergenic | 20.0% |
| !! | CAACTAAACTAATTTATTTG+AGG | - | chr3_4:74692720-74692739 | Msa0521730:intron | 20.0% |
| !!! | ATTTAGGATTCATTAGAAAT+TGG | - | chr3_4:74692940-74692959 | Msa0521730:CDS | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | + | chr3_4:74693074-74693093 | None:intergenic | 20.0% |
| !!! | GTGTATATTTTAACATAAGA+GGG | + | chr3_4:74693075-74693094 | None:intergenic | 20.0% |
| !!! | AGTGTATATTTTAACATAAG+AGG | + | chr3_4:74693076-74693095 | None:intergenic | 20.0% |
| !!! | TAGTCCTTATTTACTTATTA+AGG | - | chr3_4:74693614-74693633 | Msa0521730:intron | 20.0% |
| !!! | AGTCCTTATTTACTTATTAA+GGG | - | chr3_4:74693615-74693634 | Msa0521730:intron | 20.0% |
| !! | AATAATTTATAACCCATGAA+GGG | + | chr3_4:74693836-74693855 | None:intergenic | 20.0% |
| !! | TAATAATTTATAACCCATGA+AGG | + | chr3_4:74693837-74693856 | None:intergenic | 20.0% |
| !!! | ACTTCAAATTTGAAATGTTT+GGG | + | chr3_4:74694305-74694324 | None:intergenic | 20.0% |
| !!! | AACTTCAAATTTGAAATGTT+TGG | + | chr3_4:74694306-74694325 | None:intergenic | 20.0% |
| !!! | AATTCAAATTTGAAGCTAAT+TGG | + | chr3_4:74694333-74694352 | None:intergenic | 20.0% |
| !! | CTTGACAAATCTAAATAATA+TGG | + | chr3_4:74695711-74695730 | None:intergenic | 20.0% |
| !!! | ATTCAATATTCCTTTTTTTG+TGG | - | chr3_4:74696074-74696093 | Msa0521730:CDS | 20.0% |
| !! | TTATCTATTTTATCAGAGGT+AGG | - | chr3_4:74691471-74691490 | Msa0521730:intron | 25.0% |
| !! | TATCTATTTTATCAGAGGTA+GGG | - | chr3_4:74691472-74691491 | Msa0521730:intron | 25.0% |
| !! | TGGATTGATTTATTTGAGTT+TGG | - | chr3_4:74691501-74691520 | Msa0521730:CDS | 25.0% |
| !! | GGATTGATTTATTTGAGTTT+GGG | - | chr3_4:74691502-74691521 | Msa0521730:CDS | 25.0% |
| !! | TTTTTGTTCAGTAGAACTTT+TGG | - | chr3_4:74691541-74691560 | Msa0521730:intron | 25.0% |
| !!! | ATTGTTTTTGCAAATGCTAT+AGG | + | chr3_4:74691642-74691661 | None:intergenic | 25.0% |
| ! | GTGTTTATGCTAGTATATAA+AGG | + | chr3_4:74691764-74691783 | None:intergenic | 25.0% |
| !! | AACATAATTAAGACCCTTTT+TGG | + | chr3_4:74692225-74692244 | None:intergenic | 25.0% |
| ! | TGAATTACAATTGAGCATTT+AGG | - | chr3_4:74692924-74692943 | Msa0521730:intron | 25.0% |
| ! | TGTAATTTAAGCATCTTTGA+GGG | + | chr3_4:74693044-74693063 | None:intergenic | 25.0% |
| !!! | TATTTTTCTTTGAAGTGTGT+TGG | + | chr3_4:74693259-74693278 | None:intergenic | 25.0% |
| ! | TCAAAGAAAAATAGCATTGT+AGG | - | chr3_4:74693266-74693285 | Msa0521730:intron | 25.0% |
| ! | TTATTAAAGCCGATTAAGTA+TGG | - | chr3_4:74693419-74693438 | Msa0521730:intron | 25.0% |
| ! | CTTATTTACTTATTAAGGGA+GGG | - | chr3_4:74693619-74693638 | Msa0521730:intron | 25.0% |
| ! | TTATTTACTTATTAAGGGAG+GGG | - | chr3_4:74693620-74693639 | Msa0521730:intron | 25.0% |
| ! | TTGTAATTCAAGCATCTTAT+AGG | - | chr3_4:74693644-74693663 | Msa0521730:intron | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+GGG | - | chr3_4:74693645-74693664 | Msa0521730:intron | 25.0% |
| !!! | TAAATTTTACTTTTCAAGGG+AGG | - | chr3_4:74693678-74693697 | Msa0521730:intron | 25.0% |
| !!! | AAATTTTACTTTTCAAGGGA+GGG | - | chr3_4:74693679-74693698 | Msa0521730:intron | 25.0% |
| ! | AGTGTATATTTCAACATAAG+AGG | - | chr3_4:74693703-74693722 | Msa0521730:intron | 25.0% |
| ! | GTGTATATTTCAACATAAGA+GGG | - | chr3_4:74693704-74693723 | Msa0521730:intron | 25.0% |
| ! | TGTATATTTCAACATAAGAG+GGG | - | chr3_4:74693705-74693724 | Msa0521730:intron | 25.0% |
| ! | TTCAATATCTGTTCATATTG+TGG | + | chr3_4:74693970-74693989 | None:intergenic | 25.0% |
| ! | CTTACAGATTGAAATAAATC+TGG | - | chr3_4:74694449-74694468 | Msa0521730:intron | 25.0% |
| ! | AGATTGAAATAAATCTGGTT+TGG | - | chr3_4:74694454-74694473 | Msa0521730:intron | 25.0% |
| !!! | CTTGTTACCTGATTTTTTAT+GGG | - | chr3_4:74694631-74694650 | Msa0521730:CDS | 25.0% |
| !!! | TTGTTACCTGATTTTTTATG+GGG | - | chr3_4:74694632-74694651 | Msa0521730:CDS | 25.0% |
| ! | AATAAAGCCATTAACATAGA+AGG | + | chr3_4:74694746-74694765 | None:intergenic | 25.0% |
| !!! | TATGTTAATGGCTTTATTTG+AGG | - | chr3_4:74694748-74694767 | Msa0521730:CDS | 25.0% |
| ! | TGTTGAATATACTTTCAAGA+AGG | + | chr3_4:74694967-74694986 | None:intergenic | 25.0% |
| ! | TAATTAATCTAGCATTTCCT+TGG | - | chr3_4:74695053-74695072 | Msa0521730:intron | 25.0% |
| !! | ATGATGTTTTCATTTATTGC+AGG | - | chr3_4:74695590-74695609 | Msa0521730:intron | 25.0% |
| !!! | AGACAAAAACATTTGACTTT+TGG | - | chr3_4:74695750-74695769 | Msa0521730:intron | 25.0% |
| !! | TTTTGTTCACATTTTGTTGA+AGG | - | chr3_4:74695944-74695963 | Msa0521730:CDS | 25.0% |
| !! | TTTGTTCACATTTTGTTGAA+GGG | - | chr3_4:74695945-74695964 | Msa0521730:CDS | 25.0% |
| ! | GACAAGCAAAAAATAGTATT+TGG | + | chr3_4:74696001-74696020 | None:intergenic | 25.0% |
| !!! | TTTGCTTGTCTTTTATTTAG+AGG | - | chr3_4:74696011-74696030 | Msa0521730:CDS | 25.0% |
| AACAAAAACCCTAATCTGTT+TGG | - | chr3_4:74690820-74690839 | Msa0521730:three_prime_UTR | 30.0% | |
| !! | GAACTTTTGGAAACAACTTA+TGG | - | chr3_4:74691554-74691573 | Msa0521730:intron | 30.0% |
| ! | TAGTATATAAAGGGCTTGTT+TGG | + | chr3_4:74691754-74691773 | None:intergenic | 30.0% |
| TCAAATAAGTCCATTCAAAC+AGG | + | chr3_4:74691802-74691821 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCCAT+TGG | - | chr3_4:74691812-74691831 | Msa0521730:intron | 30.0% | |
| TTGGAAAACTTGTGGAAATA+AGG | + | chr3_4:74692097-74692116 | None:intergenic | 30.0% | |
| ! | TAGCAATGTCTTGAAAGTTT+TGG | - | chr3_4:74692396-74692415 | Msa0521730:CDS | 30.0% |
| ! | AGCAATGTCTTGAAAGTTTT+GGG | - | chr3_4:74692397-74692416 | Msa0521730:CDS | 30.0% |
| ATTTCTATCTCTGTTCTTTC+TGG | - | chr3_4:74692888-74692907 | Msa0521730:intron | 30.0% | |
| TTTCTATCTCTGTTCTTTCT+GGG | - | chr3_4:74692889-74692908 | Msa0521730:intron | 30.0% | |
| AGTAGTTGAGTATCATTTGA+AGG | - | chr3_4:74692965-74692984 | Msa0521730:CDS | 30.0% | |
| GTAATTTAAGCATCTTTGAG+GGG | + | chr3_4:74693043-74693062 | None:intergenic | 30.0% | |
| GTGTAATTTAAGCATCTTTG+AGG | + | chr3_4:74693045-74693064 | None:intergenic | 30.0% | |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | chr3_4:74693070-74693089 | None:intergenic | 30.0% |
| !!! | ATATTTTAACATAAGAGGGG+AGG | + | chr3_4:74693071-74693090 | None:intergenic | 30.0% |
| !! | ATGTTTTGAATAAAAGGGGA+GGG | + | chr3_4:74693100-74693119 | None:intergenic | 30.0% |
| !! | TATGTTTTGAATAAAAGGGG+AGG | + | chr3_4:74693101-74693120 | None:intergenic | 30.0% |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | chr3_4:74693070-74693089 | None:intergenic | 30.0% |
| !!! | TTATTTTAACATAAGAGGGG+AGG | + | chr3_4:74693174-74693193 | None:intergenic | 30.0% |
| CCTCCCTTAATAAGTAAATA+AGG | + | chr3_4:74693621-74693640 | None:intergenic | 30.0% | |
| ! | CCTTATTTACTTATTAAGGG+AGG | - | chr3_4:74693618-74693637 | Msa0521730:intron | 30.0% |
| TATTTACTTATTAAGGGAGG+GGG | - | chr3_4:74693621-74693640 | Msa0521730:intron | 30.0% | |
| !! | AATTTTACTTTTCAAGGGAG+GGG | - | chr3_4:74693680-74693699 | Msa0521730:intron | 30.0% |
| CTTGTACATCTTTAAGTACA+AGG | - | chr3_4:74693927-74693946 | Msa0521730:intron | 30.0% | |
| ! | AGTCTAAGATAAGATATACC+TGG | + | chr3_4:74694230-74694249 | None:intergenic | 30.0% |
| ! | TTCTCTTTATGCAGCTTTTT+GGG | + | chr3_4:74694497-74694516 | None:intergenic | 30.0% |
| ! | TTTCTCTTTATGCAGCTTTT+TGG | + | chr3_4:74694498-74694517 | None:intergenic | 30.0% |
| !!! | GCTTGTTACCTGATTTTTTA+TGG | - | chr3_4:74694630-74694649 | Msa0521730:CDS | 30.0% |
| TATGTACCCCATAAAAAATC+AGG | + | chr3_4:74694641-74694660 | None:intergenic | 30.0% | |
| ! | TATATATTAAAAGGGGGCAT+TGG | + | chr3_4:74694843-74694862 | None:intergenic | 30.0% |
| TTAAAGTTATTTGTTTCCCC+AGG | - | chr3_4:74694869-74694888 | Msa0521730:CDS | 30.0% | |
| AATATACTTTCAAGAAGGTC+CGG | + | chr3_4:74694962-74694981 | None:intergenic | 30.0% | |
| AAGTAGATGAACCAACTTTA+AGG | - | chr3_4:74695018-74695037 | Msa0521730:intron | 30.0% | |
| TCTTCAAAGAGAAAAGGATT+AGG | + | chr3_4:74695278-74695297 | None:intergenic | 30.0% | |
| TGAATCTCTTCAAAGAGAAA+AGG | + | chr3_4:74695284-74695303 | None:intergenic | 30.0% | |
| ACAAAATACCTGTGTTTATG+TGG | + | chr3_4:74695349-74695368 | None:intergenic | 30.0% | |
| TATTAATTGTCCTAGCTTGA+AGG | - | chr3_4:74695497-74695516 | Msa0521730:intron | 30.0% | |
| AAATGTGAACAAAATTCTGC+CGG | + | chr3_4:74695938-74695957 | None:intergenic | 30.0% | |
| TAGTATTTGGTATTACACGT+AGG | + | chr3_4:74695988-74696007 | None:intergenic | 30.0% | |
| ATTTGAAAACATAAGTGGGT+GGG | + | chr3_4:74696042-74696061 | None:intergenic | 30.0% | |
| CCTCATTTGAAAACATAAGT+GGG | + | chr3_4:74696046-74696065 | None:intergenic | 30.0% | |
| ! | CCACTTATGTTTTCAAATGA+GGG | - | chr3_4:74696044-74696063 | Msa0521730:CDS | 30.0% |
| TGGTATTTGTCCACAAAAAA+AGG | + | chr3_4:74696087-74696106 | None:intergenic | 30.0% | |
| AAGAAGTTTCGTACATTTGG+TGG | + | chr3_4:74691022-74691041 | None:intergenic | 35.0% | |
| GGAAAGAAGTTTCGTACATT+TGG | + | chr3_4:74691025-74691044 | None:intergenic | 35.0% | |
| TAATTACTGCAGTCTCTTTC+AGG | - | chr3_4:74691214-74691233 | Msa0521730:three_prime_UTR | 35.0% | |
| ! | ATATCCCAAAGCCATTGATT+CGG | + | chr3_4:74691272-74691291 | None:intergenic | 35.0% |
| ! | TATTTGAGTTTGGGTCTGTT+TGG | - | chr3_4:74691511-74691530 | Msa0521730:CDS | 35.0% |
| ATAAACACTTACGAGACTCT+GGG | - | chr3_4:74691776-74691795 | Msa0521730:intron | 35.0% | |
| ! | AAACTATCTTGGAGTGCTTA+TGG | + | chr3_4:74691921-74691940 | None:intergenic | 35.0% |
| GCTGTTGTCATAAACTATCT+TGG | + | chr3_4:74691932-74691951 | None:intergenic | 35.0% | |
| TTATACTTAGGCGCTTATCA+TGG | - | chr3_4:74692008-74692027 | Msa0521730:intron | 35.0% | |
| CAGTTATGGAACACATCATA+AGG | + | chr3_4:74692068-74692087 | None:intergenic | 35.0% | |
| !! | GTTGTTTTCATGAGTCAAGT+TGG | + | chr3_4:74692116-74692135 | None:intergenic | 35.0% |
| !! | ATGTTGTCTTTTGCTGTCTT+AGG | - | chr3_4:74692240-74692259 | Msa0521730:CDS | 35.0% |
| ! | TCTTAGGCTTGGAATGTTTT+TGG | - | chr3_4:74692256-74692275 | Msa0521730:intron | 35.0% |
| AATTATTCAGATACTCGAGC+AGG | - | chr3_4:74692318-74692337 | Msa0521730:intron | 35.0% | |
| AACGATGGCTATGATTACAA+TGG | - | chr3_4:74692370-74692389 | Msa0521730:intron | 35.0% | |
| ! | GCAATGTCTTGAAAGTTTTG+GGG | - | chr3_4:74692398-74692417 | Msa0521730:CDS | 35.0% |
| !!! | AGTTTTGGGGTATTTCAGTA+TGG | - | chr3_4:74692411-74692430 | Msa0521730:CDS | 35.0% |
| CCTGACTGACTAATATCAAT+AGG | + | chr3_4:74692499-74692518 | None:intergenic | 35.0% | |
| CCTATTGATATTAGTCAGTC+AGG | - | chr3_4:74692496-74692515 | Msa0521730:intron | 35.0% | |
| GGTGTTTACACCATTGTTAT+TGG | - | chr3_4:74692517-74692536 | Msa0521730:intron | 35.0% | |
| AATGTGGCATCCAATAACAA+TGG | + | chr3_4:74692530-74692549 | None:intergenic | 35.0% | |
| ATTACCACCATTTACCACTA+TGG | - | chr3_4:74692547-74692566 | Msa0521730:intron | 35.0% | |
| AAAACCATAGTGGTAAATGG+TGG | + | chr3_4:74692554-74692573 | None:intergenic | 35.0% | |
| TAAGATTGGCAAAACCATAG+TGG | + | chr3_4:74692564-74692583 | None:intergenic | 35.0% | |
| TTTGCCTTGTATCACTTGAA+TGG | - | chr3_4:74692747-74692766 | Msa0521730:intron | 35.0% | |
| ATACACTGACAGAATAGAGA+CGG | + | chr3_4:74692773-74692792 | None:intergenic | 35.0% | |
| AGTGTATTGTTTATGTCCAC+AGG | - | chr3_4:74692786-74692805 | Msa0521730:intron | 35.0% | |
| TCCACAGGCTCAAATAATAT+TGG | - | chr3_4:74692801-74692820 | Msa0521730:intron | 35.0% | |
| ACCAATATTATTTGAGCCTG+TGG | + | chr3_4:74692805-74692824 | None:intergenic | 35.0% | |
| TTCTATCTCTGTTCTTTCTG+GGG | - | chr3_4:74692890-74692909 | Msa0521730:intron | 35.0% | |
| TTGAGTATCATTTGAAGGTG+TGG | - | chr3_4:74692970-74692989 | Msa0521730:CDS | 35.0% | |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | chr3_4:74693069-74693088 | None:intergenic | 35.0% |
| GTAATTCAAGCTTCTCTCAA+GGG | + | chr3_4:74693146-74693165 | None:intergenic | 35.0% | |
| TGTAATTCAAGCTTCTCTCA+AGG | + | chr3_4:74693147-74693166 | None:intergenic | 35.0% | |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | chr3_4:74693069-74693088 | None:intergenic | 35.0% |
| ATTCAAGCATCTTATAGGGA+AGG | - | chr3_4:74693649-74693668 | Msa0521730:intron | 35.0% | |
| TTCAAGCATCTTATAGGGAA+GGG | - | chr3_4:74693650-74693669 | Msa0521730:intron | 35.0% | |
| ATATTTCAACATAAGAGGGG+AGG | - | chr3_4:74693708-74693727 | Msa0521730:intron | 35.0% | |
| TATTTCAACATAAGAGGGGA+GGG | - | chr3_4:74693709-74693728 | Msa0521730:intron | 35.0% | |
| TGTAGTTCAAGCATCTTTGA+GGG | - | chr3_4:74693735-74693754 | Msa0521730:intron | 35.0% | |
| TGTAGAAAAGGCTACATTTC+AGG | + | chr3_4:74693870-74693889 | None:intergenic | 35.0% | |
| ! | AATGCAACGATATGATGATG+AGG | - | chr3_4:74694110-74694129 | Msa0521730:intron | 35.0% |
| ACCTGGTTGTAATTTACTAG+AGG | + | chr3_4:74694213-74694232 | None:intergenic | 35.0% | |
| TCTAAACAATGACAGCTGAT+GGG | + | chr3_4:74694802-74694821 | None:intergenic | 35.0% | |
| ATCTAAACAATGACAGCTGA+TGG | + | chr3_4:74694803-74694822 | None:intergenic | 35.0% | |
| !! | GTTGTTGCTTTGCTTCATAA+AGG | + | chr3_4:74694923-74694942 | None:intergenic | 35.0% |
| AAGCAACAACAGTTGTTATC+AGG | - | chr3_4:74694933-74694952 | Msa0521730:intron | 35.0% | |
| !! | GTAACTTGCAAGTTTTGCAA+GGG | + | chr3_4:74694994-74695013 | None:intergenic | 35.0% |
| !! | TGTAACTTGCAAGTTTTGCA+AGG | + | chr3_4:74694995-74695014 | None:intergenic | 35.0% |
| TGCAAAACTTGCAAGTTACA+TGG | - | chr3_4:74694995-74695014 | Msa0521730:intron | 35.0% | |
| AAGTCTTGCAACCTTAAAGT+TGG | + | chr3_4:74695032-74695051 | None:intergenic | 35.0% | |
| !! | TGCATTTCCATTTTGATGCT+TGG | - | chr3_4:74695129-74695148 | Msa0521730:intron | 35.0% |
| AGTAATATCCAATGCTGATG+TGG | - | chr3_4:74695209-74695228 | Msa0521730:intron | 35.0% | |
| ATAGAAATCCACATCAGCAT+TGG | + | chr3_4:74695220-74695239 | None:intergenic | 35.0% | |
| AGTTTAAACCTGTGTCTTGA+TGG | - | chr3_4:74695371-74695390 | Msa0521730:intron | 35.0% | |
| CTAAATAATATGGACCGCAA+AGG | + | chr3_4:74695701-74695720 | None:intergenic | 35.0% | |
| ! | TTCACATTTTGTTGAAGGGA+AGG | - | chr3_4:74695949-74695968 | Msa0521730:CDS | 35.0% |
| CATTTGAAAACATAAGTGGG+TGG | + | chr3_4:74696043-74696062 | None:intergenic | 35.0% | |
| ! | CCCACTTATGTTTTCAAATG+AGG | - | chr3_4:74696043-74696062 | Msa0521730:CDS | 35.0% |
| CCCTCATTTGAAAACATAAG+TGG | + | chr3_4:74696047-74696066 | None:intergenic | 35.0% | |
| ACAACGCATCAAAAGAAACA+TGG | + | chr3_4:74696107-74696126 | None:intergenic | 35.0% | |
| TTATTGCTGAACGCTGTTAA+TGG | - | chr3_4:74696144-74696163 | Msa0521730:CDS | 35.0% | |
| ATGTAGATTAATGATACGGC+TGG | - | chr3_4:74696230-74696249 | Msa0521730:CDS | 35.0% | |
| TGTAGATTAATGATACGGCT+GGG | - | chr3_4:74696231-74696250 | Msa0521730:CDS | 35.0% | |
| CGCAGTATCCAAACAGATTA+GGG | + | chr3_4:74690831-74690850 | None:intergenic | 40.0% | |
| CCTAATCTGTTTGGATACTG+CGG | - | chr3_4:74690829-74690848 | Msa0521730:three_prime_UTR | 40.0% | |
| !!! | AACGAAGGTTTTGACTGGAT+CGG | + | chr3_4:74690955-74690974 | None:intergenic | 40.0% |
| !! | TGAACAACGAAGGTTTTGAC+TGG | + | chr3_4:74690960-74690979 | None:intergenic | 40.0% |
| CATTCTTCTCTCTGATGTGA+CGG | + | chr3_4:74690989-74691008 | None:intergenic | 40.0% | |
| CTTGAAGAAACGGTCAGATA+GGG | + | chr3_4:74691051-74691070 | None:intergenic | 40.0% | |
| ATGGTGTGTCCTTGAAGAAA+CGG | + | chr3_4:74691061-74691080 | None:intergenic | 40.0% | |
| ATATGCAGCTTCCGAATCAA+TGG | - | chr3_4:74691258-74691277 | Msa0521730:exon | 40.0% | |
| !! | GAATCAATGGCTTTGGGATA+TGG | - | chr3_4:74691271-74691290 | Msa0521730:exon | 40.0% |
| TCTCTTGAAACAGTTCGATC+AGG | - | chr3_4:74691373-74691392 | Msa0521730:intron | 40.0% | |
| ! | TATCAGAGGTAGGGTTTGTT+TGG | - | chr3_4:74691481-74691500 | Msa0521730:CDS | 40.0% |
| CATAAACACTTACGAGACTC+TGG | - | chr3_4:74691775-74691794 | Msa0521730:intron | 40.0% | |
| GTCACAAGTGTTTATGCCAA+TGG | + | chr3_4:74691831-74691850 | None:intergenic | 40.0% | |
| TTGAGAGAACACATGAAGAC+AGG | - | chr3_4:74691856-74691875 | Msa0521730:intron | 40.0% | |
| !! | GAGTCAAGTTGGAAAACTTG+TGG | + | chr3_4:74692105-74692124 | None:intergenic | 40.0% |
| AGGAAGCTGTTCATCCAAAA+AGG | - | chr3_4:74692208-74692227 | Msa0521730:CDS | 40.0% | |
| GGAAGCTGTTCATCCAAAAA+GGG | - | chr3_4:74692209-74692228 | Msa0521730:CDS | 40.0% | |
| GATGGCTATGATTACAATGG+TGG | - | chr3_4:74692373-74692392 | Msa0521730:intron | 40.0% | |
| ! | TTGGGGTATTTCAGTATGGT+TGG | - | chr3_4:74692415-74692434 | Msa0521730:CDS | 40.0% |
| ! | AGTGGTAAATGGTGGTAATG+TGG | + | chr3_4:74692546-74692565 | None:intergenic | 40.0% |
| GGCAAAACCATAGTGGTAAA+TGG | + | chr3_4:74692557-74692576 | None:intergenic | 40.0% | |
| GCAAGCAAGCAATTGATTAG+TGG | + | chr3_4:74692607-74692626 | None:intergenic | 40.0% | |
| ATCTTGCACATATCCACACA+TGG | - | chr3_4:74692859-74692878 | Msa0521730:intron | 40.0% | |
| CACATATCCACACATGGAAT+GGG | - | chr3_4:74692865-74692884 | Msa0521730:intron | 40.0% | |
| TAGAAATCCCATTCCATGTG+TGG | + | chr3_4:74692875-74692894 | None:intergenic | 40.0% | |
| !!! | CTGTTCTTTCTGGGGTTTTT+AGG | - | chr3_4:74692898-74692917 | Msa0521730:intron | 40.0% |
| ! | TTTAAGCATCTTTGAGGGGA+GGG | + | chr3_4:74693039-74693058 | None:intergenic | 40.0% |
| ! | ATTTAAGCATCTTTGAGGGG+AGG | + | chr3_4:74693040-74693059 | None:intergenic | 40.0% |
| TCAAGCATCTTATAGGGAAG+GGG | - | chr3_4:74693651-74693670 | Msa0521730:intron | 40.0% | |
| ATTTCAACATAAGAGGGGAG+GGG | - | chr3_4:74693710-74693729 | Msa0521730:intron | 40.0% | |
| GTGTAGTTCAAGCATCTTTG+AGG | - | chr3_4:74693734-74693753 | Msa0521730:intron | 40.0% | |
| GTAGTTCAAGCATCTTTGAG+GGG | - | chr3_4:74693736-74693755 | Msa0521730:intron | 40.0% | |
| TTATGTGTGCTTTCCCTTCA+TGG | - | chr3_4:74693820-74693839 | Msa0521730:intron | 40.0% | |
| TATGTGTGCTTTCCCTTCAT+GGG | - | chr3_4:74693821-74693840 | Msa0521730:intron | 40.0% | |
| ! | TAGCCTTTTCTACAGATACG+TGG | - | chr3_4:74693876-74693895 | Msa0521730:intron | 40.0% |
| CATCCACGTATCTGTAGAAA+AGG | + | chr3_4:74693882-74693901 | None:intergenic | 40.0% | |
| CATATTGTGGAGACTTCTGA+TGG | + | chr3_4:74693957-74693976 | None:intergenic | 40.0% | |
| TGAACAAATGTATGCGTTGC+TGG | - | chr3_4:74693996-74694015 | Msa0521730:intron | 40.0% | |
| TTCATCAACAAGCCTGCTTT+GGG | + | chr3_4:74694043-74694062 | None:intergenic | 40.0% | |
| TTTCATCAACAAGCCTGCTT+TGG | + | chr3_4:74694044-74694063 | None:intergenic | 40.0% | |
| CTGAAGGGGTAATAAACTTG+GGG | + | chr3_4:74694173-74694192 | None:intergenic | 40.0% | |
| GCTGAAGGGGTAATAAACTT+GGG | + | chr3_4:74694174-74694193 | None:intergenic | 40.0% | |
| ACTAGAGGCTCTTCAAAACT+GGG | + | chr3_4:74694198-74694217 | None:intergenic | 40.0% | |
| TACTAGAGGCTCTTCAAAAC+TGG | + | chr3_4:74694199-74694218 | None:intergenic | 40.0% | |
| GCCTCTAGTAAATTACAACC+AGG | - | chr3_4:74694209-74694228 | Msa0521730:intron | 40.0% | |
| TTAGACTCCATCTGTGATCT+TGG | - | chr3_4:74694243-74694262 | Msa0521730:intron | 40.0% | |
| CACTCACTCAAAATGCTCTA+TGG | + | chr3_4:74694276-74694295 | None:intergenic | 40.0% | |
| !! | TTATGCAGCTTTTTGGGAGA+TGG | + | chr3_4:74694491-74694510 | None:intergenic | 40.0% |
| CTCTGAGCCTTCTATGTTAA+TGG | - | chr3_4:74694736-74694755 | Msa0521730:CDS | 40.0% | |
| !! | ATTAAAAGGGGGCATTGGAA+AGG | + | chr3_4:74694838-74694857 | None:intergenic | 40.0% |
| TTGAAGTCTATACGCATCCT+GGG | + | chr3_4:74694889-74694908 | None:intergenic | 40.0% | |
| ATTGAAGTCTATACGCATCC+TGG | + | chr3_4:74694890-74694909 | None:intergenic | 40.0% | |
| AACAGTTGTTATCAGGTCTC+CGG | - | chr3_4:74694940-74694959 | Msa0521730:intron | 40.0% | |
| !! | TTTCCATTTTGATGCTTGGC+AGG | - | chr3_4:74695133-74695152 | Msa0521730:intron | 40.0% |
| AGAGAAAAGGATTAGGCAAG+AGG | + | chr3_4:74695271-74695290 | None:intergenic | 40.0% | |
| TACTGTTACCATCAAGACAC+AGG | + | chr3_4:74695382-74695401 | None:intergenic | 40.0% | |
| ACCATTGTTAACTCGCTTCT+TGG | - | chr3_4:74695463-74695482 | Msa0521730:intron | 40.0% | |
| ACCAAGAAGCGAGTTAACAA+TGG | + | chr3_4:74695467-74695486 | None:intergenic | 40.0% | |
| TGGAGTCTAAACCTTCCAAA+CGG | - | chr3_4:74695628-74695647 | Msa0521730:intron | 40.0% | |
| TCTAAACCTTCCAAACGGTA+TGG | - | chr3_4:74695633-74695652 | Msa0521730:intron | 40.0% | |
| TAATCTCCATACCGTTTGGA+AGG | + | chr3_4:74695642-74695661 | None:intergenic | 40.0% | |
| GAAGTAATCTCCATACCGTT+TGG | + | chr3_4:74695646-74695665 | None:intergenic | 40.0% | |
| !! | GTCTTGTTTGCAGCTTGAAA+AGG | - | chr3_4:74695829-74695848 | Msa0521730:CDS | 40.0% |
| TGAAAAGGTGATCAACGAGA+TGG | - | chr3_4:74695844-74695863 | Msa0521730:CDS | 40.0% | |
| GTAAAAAGGGGAACCGATAA+GGG | + | chr3_4:74695906-74695925 | None:intergenic | 40.0% | |
| AGTAAAAAGGGGAACCGATA+AGG | + | chr3_4:74695907-74695926 | None:intergenic | 40.0% | |
| CGGCAAAGCAAAGTAAAAAG+GGG | + | chr3_4:74695918-74695937 | None:intergenic | 40.0% | |
| CCGGCAAAGCAAAGTAAAAA+GGG | + | chr3_4:74695919-74695938 | None:intergenic | 40.0% | |
| ! | CCCTTTTTACTTTGCTTTGC+CGG | - | chr3_4:74695916-74695935 | Msa0521730:CDS | 40.0% |
| ACAGCGTTCAGCAATAAACA+AGG | + | chr3_4:74696141-74696160 | None:intergenic | 40.0% | |
| TAAGCACAAAGGACAGCTAA+CGG | + | chr3_4:74696284-74696303 | None:intergenic | 40.0% | |
| CTGAGTAAGGATAAGCACAA+AGG | + | chr3_4:74696295-74696314 | None:intergenic | 40.0% | |
| TGAGCATCACATACTGAGTA+AGG | + | chr3_4:74696308-74696327 | None:intergenic | 40.0% | |
| CCGCAGTATCCAAACAGATT+AGG | + | chr3_4:74690832-74690851 | None:intergenic | 45.0% | |
| GAGAGAGTGAAGGTAGCTTA+CGG | + | chr3_4:74690855-74690874 | None:intergenic | 45.0% | |
| AGCAGATTCAGAGAGAGTGA+AGG | + | chr3_4:74690865-74690884 | None:intergenic | 45.0% | |
| CTCTGAATCTGCTGTGACAA+TGG | - | chr3_4:74690872-74690891 | Msa0521730:three_prime_UTR | 45.0% | |
| !!! | ACGAAGGTTTTGACTGGATC+GGG | + | chr3_4:74690954-74690973 | None:intergenic | 45.0% |
| AGAAACGGTCAGATAGGGTT+TGG | + | chr3_4:74691046-74691065 | None:intergenic | 45.0% | |
| CCTTGAAGAAACGGTCAGAT+AGG | + | chr3_4:74691052-74691071 | None:intergenic | 45.0% | |
| CCTATCTGACCGTTTCTTCA+AGG | - | chr3_4:74691049-74691068 | Msa0521730:three_prime_UTR | 45.0% | |
| GTTTCTTCAAGGACACACCA+TGG | - | chr3_4:74691060-74691079 | Msa0521730:three_prime_UTR | 45.0% | |
| GGTAGAGAAGACAGAAGACA+TGG | + | chr3_4:74691124-74691143 | None:intergenic | 45.0% | |
| !! | TTCGTCAGAGAATCGATTCG+TGG | - | chr3_4:74691189-74691208 | Msa0521730:three_prime_UTR | 45.0% |
| !! | TCGTCAGAGAATCGATTCGT+GGG | - | chr3_4:74691190-74691209 | Msa0521730:three_prime_UTR | 45.0% |
| TTACTGCAGTCTCTTTCAGG+TGG | - | chr3_4:74691217-74691236 | Msa0521730:three_prime_UTR | 45.0% | |
| ! | CTCTTTCAGGTGGTTCTTCA+TGG | - | chr3_4:74691227-74691246 | Msa0521730:three_prime_UTR | 45.0% |
| AGCTTCCGAATCAATGGCTT+TGG | - | chr3_4:74691264-74691283 | Msa0521730:exon | 45.0% | |
| GCTTCCGAATCAATGGCTTT+GGG | - | chr3_4:74691265-74691284 | Msa0521730:exon | 45.0% | |
| !! | GTCTTTTGCTGTCTTAGGCT+TGG | - | chr3_4:74692245-74692264 | Msa0521730:CDS | 45.0% |
| GAGCAATTCACTGCAAACGA+TGG | - | chr3_4:74692355-74692374 | Msa0521730:intron | 45.0% | |
| !! | TCAGTATGGTTGGTTTGCTG+AGG | - | chr3_4:74692425-74692444 | Msa0521730:intron | 45.0% |
| !! | CAGTATGGTTGGTTTGCTGA+GGG | - | chr3_4:74692426-74692445 | Msa0521730:intron | 45.0% |
| CTGAGGGTTCATTGTCTCTT+GGG | - | chr3_4:74692442-74692461 | Msa0521730:intron | 45.0% | |
| CTCTTGGGTGATTATCACAC+TGG | - | chr3_4:74692457-74692476 | Msa0521730:intron | 45.0% | |
| ACGGCCATTCAAGTGATACA+AGG | + | chr3_4:74692754-74692773 | None:intergenic | 45.0% | |
| GCACATATCCACACATGGAA+TGG | - | chr3_4:74692864-74692883 | Msa0521730:intron | 45.0% | |
| ! | TTAAGCATCTTTGAGGGGAG+GGG | + | chr3_4:74693038-74693057 | None:intergenic | 45.0% |
| TTCAAGCTTCTCTCAAGGGA+GGG | + | chr3_4:74693142-74693161 | None:intergenic | 45.0% | |
| ATTCAAGCTTCTCTCAAGGG+AGG | + | chr3_4:74693143-74693162 | None:intergenic | 45.0% | |
| ! | TTCAAGCATCTTTGAGGGGA+GGG | - | chr3_4:74693740-74693759 | Msa0521730:intron | 45.0% |
| TCATCAACAAGCCTGCTTTG+GGG | + | chr3_4:74694042-74694061 | None:intergenic | 45.0% | |
| TCTCAGTTGCGAGAGAAGTA+TGG | - | chr3_4:74694072-74694091 | Msa0521730:intron | 45.0% | |
| CGCTGAAGGGGTAATAAACT+TGG | + | chr3_4:74694175-74694194 | None:intergenic | 45.0% | |
| TCCATCTGTGATCTTGGTTC+TGG | - | chr3_4:74694249-74694268 | Msa0521730:intron | 45.0% | |
| TCCAGAACCAAGATCACAGA+TGG | + | chr3_4:74694253-74694272 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAACA+AGG | + | chr3_4:74694363-74694382 | None:intergenic | 45.0% | |
| AGAAGGCTCAGAGTCAATAG+AGG | + | chr3_4:74694729-74694748 | None:intergenic | 45.0% | |
| TGAAGTCTATACGCATCCTG+GGG | + | chr3_4:74694888-74694907 | None:intergenic | 45.0% | |
| AGTCCTGCCAAGCATCAAAA+TGG | + | chr3_4:74695139-74695158 | None:intergenic | 45.0% | |
| !! | ACTCATGCTGTTGATAGTGC+TGG | - | chr3_4:74695183-74695202 | Msa0521730:intron | 45.0% |
| TTTCTGGGCCACATAAACAC+AGG | - | chr3_4:74695338-74695357 | Msa0521730:intron | 45.0% | |
| TGTTAACTCGCTTCTTGGTC+AGG | - | chr3_4:74695468-74695487 | Msa0521730:intron | 45.0% | |
| GCAGGACACAATTCATGTTG+TGG | - | chr3_4:74695608-74695627 | Msa0521730:intron | 45.0% | |
| TGGAGATTACTTCTTGCGTC+AGG | - | chr3_4:74695653-74695672 | Msa0521730:intron | 45.0% | |
| ! | CTTCTTGCGTCAGGTTGTTA+AGG | - | chr3_4:74695662-74695681 | Msa0521730:intron | 45.0% |
| ! | TGCGTCAGGTTGTTAAGGTA+TGG | - | chr3_4:74695667-74695686 | Msa0521730:intron | 45.0% |
| CAAGCTGCAAACAAGACAGA+CGG | + | chr3_4:74695826-74695845 | None:intergenic | 45.0% | |
| CGAGATGGACAGTATAAAGC+TGG | - | chr3_4:74695859-74695878 | Msa0521730:CDS | 45.0% | |
| !! | CTGGAGTGAGTTGATGTACT+TGG | - | chr3_4:74695878-74695897 | Msa0521730:CDS | 45.0% |
| GATGTACTTGGCACCCTTAT+CGG | - | chr3_4:74695890-74695909 | Msa0521730:CDS | 45.0% | |
| GCCGGCAAAGCAAAGTAAAA+AGG | + | chr3_4:74695920-74695939 | None:intergenic | 45.0% | |
| !!! | AAGAATTTATATTTTTTAAA+TGG | - | chr3_4:74693532-74693551 | Msa0521730:intron | 5.0% |
| !! | AAGTAATTTATATATTAAAA+GGG | + | chr3_4:74694851-74694870 | None:intergenic | 5.0% |
| !! | TAAGTAATTTATATATTAAA+AGG | + | chr3_4:74694852-74694871 | None:intergenic | 5.0% |
| !! | TTGTTTATTAAATATATATT+TGG | - | chr3_4:74695091-74695110 | Msa0521730:intron | 5.0% |
| ACTGGATCGGGAACGAAGTT+GGG | + | chr3_4:74690942-74690961 | None:intergenic | 50.0% | |
| ACGGTAGAGGTGAACAACGA+AGG | + | chr3_4:74690970-74690989 | None:intergenic | 50.0% | |
| TCTCTCTGATGTGACGGTAG+AGG | + | chr3_4:74690983-74691002 | None:intergenic | 50.0% | |
| GTATTGAGCGACAGCGTCTA+CGG | + | chr3_4:74691090-74691109 | None:intergenic | 50.0% | |
| GTCTTCTCTACCGTGAGATG+TGG | - | chr3_4:74691132-74691151 | Msa0521730:three_prime_UTR | 50.0% | |
| TAGGAGTGAGACGAGCATAG+AGG | + | chr3_4:74691166-74691185 | None:intergenic | 50.0% | |
| TCGATTCTCTGACGAAGCGT+AGG | + | chr3_4:74691185-74691204 | None:intergenic | 50.0% | |
| AGACTCTGGGCCTGTTTGAA+TGG | - | chr3_4:74691789-74691808 | Msa0521730:intron | 50.0% | |
| TCAGATACTCGAGCAGGAGA+AGG | - | chr3_4:74692324-74692343 | Msa0521730:intron | 50.0% | |
| ATACTCGAGCAGGAGAAGGA+AGG | - | chr3_4:74692328-74692347 | Msa0521730:intron | 50.0% | |
| TACTCGAGCAGGAGAAGGAA+GGG | - | chr3_4:74692329-74692348 | Msa0521730:intron | 50.0% | |
| GCTGAGGGTTCATTGTCTCT+TGG | - | chr3_4:74692441-74692460 | Msa0521730:intron | 50.0% | |
| ! | TCACACTGGTCTCAAGTGCT+TGG | - | chr3_4:74692471-74692490 | Msa0521730:intron | 50.0% |
| TTGCCAATCTTATGCTCCGC+AGG | - | chr3_4:74692572-74692591 | Msa0521730:intron | 50.0% | |
| TGACCTGCGGAGCATAAGAT+TGG | + | chr3_4:74692578-74692597 | None:intergenic | 50.0% | |
| TTAGTGGAAGTCGTGACCTG+CGG | + | chr3_4:74692591-74692610 | None:intergenic | 50.0% | |
| TCAAGCTTCTCTCAAGGGAG+GGG | + | chr3_4:74693141-74693160 | None:intergenic | 50.0% | |
| ! | GTTCAAGCATCTTTGAGGGG+AGG | - | chr3_4:74693739-74693758 | Msa0521730:intron | 50.0% |
| ! | TCAAGCATCTTTGAGGGGAG+GGG | - | chr3_4:74693741-74693760 | Msa0521730:intron | 50.0% |
| CATCAACAAGCCTGCTTTGG+GGG | + | chr3_4:74694041-74694060 | None:intergenic | 50.0% | |
| !! | TTCAAAACTGGGCGCTGAAG+GGG | + | chr3_4:74694187-74694206 | None:intergenic | 50.0% |
| !! | CTTCAAAACTGGGCGCTGAA+GGG | + | chr3_4:74694188-74694207 | None:intergenic | 50.0% |
| !! | TCTTCAAAACTGGGCGCTGA+AGG | + | chr3_4:74694189-74694208 | None:intergenic | 50.0% |
| !! | GCTTTTTGGGAGATGGAGCT+AGG | + | chr3_4:74694484-74694503 | None:intergenic | 50.0% |
| CTGATTCTCGCCTTCAAGCT+AGG | + | chr3_4:74695510-74695529 | None:intergenic | 50.0% | |
| CTAGCTTGAAGGCGAGAATC+AGG | - | chr3_4:74695508-74695527 | Msa0521730:intron | 50.0% | |
| GAAGGCGAGAATCAGGCTTT+AGG | - | chr3_4:74695515-74695534 | Msa0521730:intron | 50.0% | |
| GTATGGTTGCGTCTCCTTTG+CGG | - | chr3_4:74695684-74695703 | Msa0521730:intron | 50.0% | |
| !! | TGCGATCCTCCGCTTTTGAA+AGG | + | chr3_4:74696257-74696276 | None:intergenic | 50.0% |
| CGTCTCCAAGCTCAAGACCT+AGG | - | chr3_4:74690909-74690928 | Msa0521730:three_prime_UTR | 55.0% | |
| CGTAGCCTAGGTCTTGAGCT+TGG | + | chr3_4:74690917-74690936 | None:intergenic | 55.0% | |
| CGAAGTTGGGATCGTAGCCT+AGG | + | chr3_4:74690929-74690948 | None:intergenic | 55.0% | |
| GACTGGATCGGGAACGAAGT+TGG | + | chr3_4:74690943-74690962 | None:intergenic | 55.0% | |
| GGTGGCGAAACCACATCTCA+CGG | + | chr3_4:74691145-74691164 | None:intergenic | 55.0% | |
| GAGTGAGACGAGCATAGAGG+TGG | + | chr3_4:74691163-74691182 | None:intergenic | 55.0% | |
| ACGGCTGGGCCTTTCAAAAG+CGG | - | chr3_4:74696245-74696264 | Msa0521730:CDS | 55.0% | |
| TGAGCGACAGCGTCTACGGA+GGG | + | chr3_4:74691086-74691105 | None:intergenic | 60.0% | |
| TTGAGCGACAGCGTCTACGG+AGG | + | chr3_4:74691087-74691106 | None:intergenic | 60.0% | |
| GCTGGGCCTTTCAAAAGCGG+AGG | - | chr3_4:74696248-74696267 | Msa0521730:CDS | 60.0% | |
| ACAGCGTCTACGGAGGGCCA+TGG | + | chr3_4:74691080-74691099 | None:intergenic | 65.0% | |
| !! | GCTTTGGGGGCAGAGCGAGA+GGG | + | chr3_4:74694028-74694047 | None:intergenic | 65.0% |
| !! | TGCTTTGGGGGCAGAGCGAG+AGG | + | chr3_4:74694029-74694048 | None:intergenic | 65.0% |
| TCTCGCTCTGCCCCCAAAGC+AGG | - | chr3_4:74694028-74694047 | Msa0521730:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 74690787 | 74696372 | 74690787 | ID=Msa0521730;Name=Msa0521730 |
| chr3_4 | mRNA | 74690787 | 74696372 | 74690787 | ID=Msa0521730-mRNA-1;Parent=Msa0521730;Name=Msa0521730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=104|0.75|0.88|0.88|0.87|0.77|9|458|526 |
| chr3_4 | exon | 74690787 | 74690957 | 74690787 | ID=Msa0521730-mRNA-1:exon:21248;Parent=Msa0521730-mRNA-1 |
| chr3_4 | exon | 74690986 | 74691317 | 74690986 | ID=Msa0521730-mRNA-1:exon:21247;Parent=Msa0521730-mRNA-1 |
| chr3_4 | exon | 74691476 | 74691547 | 74691476 | ID=Msa0521730-mRNA-1:exon:21246;Parent=Msa0521730-mRNA-1 |
| chr3_4 | exon | 74691911 | 74692004 | 74691911 | ID=Msa0521730-mRNA-1:exon:21245;Parent=Msa0521730-mRNA-1 |
| chr3_4 | exon | 74692120 | 74692268 | 74692120 | ID=Msa0521730-mRNA-1:exon:21244;Parent=Msa0521730-mRNA-1 |
| chr3_4 | exon | 74692390 | 74692434 | 74692390 | ID=Msa0521730-mRNA-1:exon:21243;Parent=Msa0521730-mRNA-1 |
| chr3_4 | exon | 74692929 | 74693268 | 74692929 | ID=Msa0521730-mRNA-1:exon:21242;Parent=Msa0521730-mRNA-1 |
| chr3_4 | exon | 74694566 | 74694897 | 74694566 | ID=Msa0521730-mRNA-1:exon:21241;Parent=Msa0521730-mRNA-1 |
| chr3_4 | exon | 74695765 | 74696372 | 74695765 | ID=Msa0521730-mRNA-1:exon:21240;Parent=Msa0521730-mRNA-1 |
| chr3_4 | five_prime_UTR | 74696269 | 74696372 | 74696269 | ID=Msa0521730-mRNA-1:five_prime_utr;Parent=Msa0521730-mRNA-1 |
| chr3_4 | CDS | 74695765 | 74696268 | 74695765 | ID=Msa0521730-mRNA-1:cds;Parent=Msa0521730-mRNA-1 |
| chr3_4 | CDS | 74694566 | 74694897 | 74694566 | ID=Msa0521730-mRNA-1:cds;Parent=Msa0521730-mRNA-1 |
| chr3_4 | CDS | 74692929 | 74693268 | 74692929 | ID=Msa0521730-mRNA-1:cds;Parent=Msa0521730-mRNA-1 |
| chr3_4 | CDS | 74692390 | 74692434 | 74692390 | ID=Msa0521730-mRNA-1:cds;Parent=Msa0521730-mRNA-1 |
| chr3_4 | CDS | 74692120 | 74692268 | 74692120 | ID=Msa0521730-mRNA-1:cds;Parent=Msa0521730-mRNA-1 |
| chr3_4 | CDS | 74691911 | 74692004 | 74691911 | ID=Msa0521730-mRNA-1:cds;Parent=Msa0521730-mRNA-1 |
| chr3_4 | CDS | 74691476 | 74691547 | 74691476 | ID=Msa0521730-mRNA-1:cds;Parent=Msa0521730-mRNA-1 |
| chr3_4 | CDS | 74691273 | 74691317 | 74691273 | ID=Msa0521730-mRNA-1:cds;Parent=Msa0521730-mRNA-1 |
| chr3_4 | three_prime_UTR | 74690986 | 74691272 | 74690986 | ID=Msa0521730-mRNA-1:three_prime_utr;Parent=Msa0521730-mRNA-1 |
| chr3_4 | three_prime_UTR | 74690787 | 74690957 | 74690787 | ID=Msa0521730-mRNA-1:three_prime_utr;Parent=Msa0521730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
