AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0286400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0286400 MtrunA17_Chr2g0303181 94.964 139 7 0 9 147 35 173 3.18e-94 270
Msa0286400 MtrunA17_Chr8g0381011 73.050 141 32 1 13 147 36 176 4.24e-69 206
Msa0286400 MtrunA17_Chr4g0054701 62.338 77 29 0 13 89 65 141 3.93e-31 109
Msa0286400 MtrunA17_Chr4g0047341 44.737 76 42 0 18 93 40 115 1.20e-22 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0286400 AT4G20380.2 62.937 143 41 3 17 147 47 189 1.58e-49 157
Msa0286400 AT4G20380.7 62.937 143 41 3 17 147 47 189 1.58e-49 157
Msa0286400 AT4G20380.6 62.937 143 41 3 17 147 42 184 2.05e-49 157
Msa0286400 AT4G20380.3 62.937 143 41 3 17 147 42 184 2.05e-49 157
Msa0286400 AT4G20380.4 62.937 143 41 3 17 147 42 184 2.05e-49 157
Msa0286400 AT4G20380.1 62.937 143 41 3 17 147 42 184 2.05e-49 157
Msa0286400 AT4G20380.5 62.937 143 41 3 17 147 42 184 2.05e-49 157
Msa0286400 AT4G20380.8 53.254 169 41 3 17 147 42 210 8.03e-46 149
Msa0286400 AT4G20380.8 58.209 67 25 1 20 83 4 70 7.50e-18 76.6
Msa0286400 AT1G32540.1 61.842 76 29 0 13 88 99 174 4.05e-30 108
Msa0286400 AT1G32540.3 61.039 77 30 0 13 89 66 142 7.10e-30 106
Msa0286400 AT1G32540.2 61.039 77 30 0 13 89 66 142 7.10e-30 106
Msa0286400 AT1G32540.5 62.162 74 28 0 13 86 66 139 3.75e-29 104
Msa0286400 AT4G20380.9 60.241 83 24 2 17 90 42 124 1.36e-28 102
Msa0286400 AT4G21610.1 46.512 86 43 1 11 96 54 136 4.22e-25 94.4
Msa0286400 AT4G21610.2 45.000 80 41 1 11 90 54 130 2.84e-21 84.3
Msa0286400 AT1G32540.7 44.578 83 43 2 2 83 51 131 2.04e-15 68.9
Msa0286400 AT1G32540.7 65.000 40 14 0 13 52 99 138 2.32e-12 60.8
Msa0286400 AT1G32540.4 50.000 68 33 1 19 85 33 100 4.63e-15 67.0
Msa0286400 AT1G32540.4 70.270 37 11 0 13 49 66 102 3.69e-12 59.7
Msa0286400 AT1G32540.6 50.000 68 33 1 19 85 33 100 4.63e-15 67.0
Msa0286400 AT1G32540.6 70.270 37 11 0 13 49 66 102 3.69e-12 59.7

Find 76 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTCCTTCTTGGAATAAT+TGG 0.125303 2_3:+27484011 Msa0286400:five_prime_UTR
CTTCTTGTCTGATCCAAATT+AGG 0.175732 2_3:+27484113 Msa0286400:five_prime_UTR
ATGCATCCCTTGTTAATAAT+TGG 0.195757 2_3:-27484225 None:intergenic
TTAAATTGAAAACTCCTTCT+TGG 0.201770 2_3:+27484002 Msa0286400:five_prime_UTR
CGTTGATTCAAGTGGGAAAT+TGG 0.251370 2_3:+27487647 Msa0286400:CDS
GATTTAAACTATAAACTAAA+TGG 0.262273 2_3:+27484310 Msa0286400:exon
CCAACCTCTAGATCCTAATT+TGG 0.269664 2_3:-27484126 None:intergenic
TCCATTCCTGCAGGCACTTC+AGG 0.284154 2_3:-27484356 None:intergenic
TCGGAGCTGGTTGTTTCATT+AGG 0.307392 2_3:-27487445 None:intergenic
TCAAAATGAACCTATCGATT+TGG 0.342668 2_3:-27488415 None:intergenic
GACTTCAATTCAATCATTGC+AGG 0.349327 2_3:-27488256 None:intergenic
TCTAGACTCTTCTCCGTTCA+AGG 0.370289 2_3:+27488277 Msa0286400:three_prime_UTR
GGCAGTTCCCACAACGGATA+TGG 0.376956 2_3:-27486663 None:intergenic
GATATAATTGACTATAGATA+TGG 0.387920 2_3:-27484184 None:intergenic
ATAAACTAAATGGTTACATC+CGG 0.415689 2_3:+27484320 Msa0286400:exon
TTGTCTCGAATTACAAGTCC+TGG 0.425475 2_3:+27488440 Msa0286400:three_prime_UTR
CTGATGCTTTAAAACGTTGT+TGG 0.430969 2_3:+27488216 Msa0286400:three_prime_UTR
AGAAGATACCGTTTCGGAGC+TGG 0.444161 2_3:-27487458 None:intergenic
AAACAATTATAGATATTCAA+TGG 0.445337 2_3:+27488560 Msa0286400:three_prime_UTR
TCCTGAAGTGCCTGCAGGAA+TGG 0.454062 2_3:+27484355 Msa0286400:CDS
CCACTTGAATCAACGGACAT+AGG 0.456065 2_3:-27487639 None:intergenic
CAGGTAAGCAATGTTGTTGT+GGG 0.474114 2_3:+27488168 Msa0286400:intron
ATTGGCTAAATAGAGAAAGA+TGG 0.476891 2_3:-27484207 None:intergenic
AGGAGTTGGCGGCCTTCCAT+TGG 0.478744 2_3:-27487413 None:intergenic
TCTACGCGTTTATGTATTGA+AGG 0.485454 2_3:+27484053 Msa0286400:five_prime_UTR
TTGGCTAAATAGAGAAAGAT+GGG 0.493322 2_3:-27484206 None:intergenic
GGACTAATAACAATTAACAT+AGG 0.496200 2_3:-27484163 None:intergenic
ATATCCGTTGTGGGAACTGC+CGG 0.504182 2_3:+27486665 Msa0286400:CDS
TGCAGTAGAAGATACCGTTT+CGG 0.505298 2_3:-27487464 None:intergenic
GACTAATAACAATTAACATA+GGG 0.516365 2_3:-27484162 None:intergenic
AAATGAACCATATCCGTTGT+GGG 0.521367 2_3:+27486656 Msa0286400:CDS
GTTTCATTAGGTGTCAGTAC+AGG 0.522934 2_3:-27487433 None:intergenic
TGTGACATTTCCATTCCTGC+AGG 0.523355 2_3:-27484365 None:intergenic
CAATTTCCCACTTGAATCAA+CGG 0.526156 2_3:-27487646 None:intergenic
AAATCAATTTAAACCTTGAA+CGG 0.528512 2_3:-27488290 None:intergenic
TAAACTAAATGGTTACATCC+GGG 0.530304 2_3:+27484321 Msa0286400:exon
AAATTTCCTGAAGTGCCTGC+AGG 0.533221 2_3:+27484350 Msa0286400:CDS
GTATTTATATGCATTATACA+AGG 0.538109 2_3:+27488316 Msa0286400:three_prime_UTR
GAGGATACATGAGTGTTGTC+CGG 0.538194 2_3:-27486684 None:intergenic
CGCGTTTATGTATTGAAGGT+AGG 0.538744 2_3:+27484057 Msa0286400:five_prime_UTR
CCAAATTAGGATCTAGAGGT+TGG 0.541970 2_3:+27484126 Msa0286400:five_prime_UTR
GAAATGTCACAACTTTATTG+TGG 0.542581 2_3:+27484377 Msa0286400:CDS
CAAATGAACCATATCCGTTG+TGG 0.547355 2_3:+27486655 Msa0286400:CDS
TGAAACAACCAGCTCCGAAA+CGG 0.550490 2_3:+27487450 Msa0286400:CDS
TATTTAGCCAATTATTAACA+AGG 0.552960 2_3:+27484218 Msa0286400:five_prime_UTR
ACAGGTAAGCAATGTTGTTG+TGG 0.554197 2_3:+27488167 Msa0286400:intron
CGAATTACAAGTCCTGGATG+TGG 0.558615 2_3:+27488446 Msa0286400:three_prime_UTR
TTAGGTGTCAGTACAGGAGT+TGG 0.564205 2_3:-27487427 None:intergenic
AAGATTTATAGTGTTACAGC+AGG 0.569605 2_3:-27484453 None:intergenic
GCATCTACATCCAAATCGAT+AGG 0.575581 2_3:+27488405 Msa0286400:three_prime_UTR
GGTGTCAGTACAGGAGTTGG+CGG 0.576256 2_3:-27487424 None:intergenic
ACAACACTCATGTATCCTCA+TGG 0.578970 2_3:+27486688 Msa0286400:CDS
ATGTCACAACTTTATTGTGG+AGG 0.583864 2_3:+27484380 Msa0286400:CDS
TGGATCCAATTATTCCAAGA+AGG 0.591600 2_3:-27484016 None:intergenic
TAAACATCAAAACCACATCC+AGG 0.597164 2_3:-27488458 None:intergenic
ATTTAGCCAATTATTAACAA+GGG 0.597265 2_3:+27484219 Msa0286400:five_prime_UTR
TGATCCAAATTAGGATCTAG+AGG 0.603492 2_3:+27484122 Msa0286400:five_prime_UTR
TGTTGGTTTATGTGATGTTG+AGG 0.613608 2_3:+27488233 Msa0286400:three_prime_UTR
TCCTGTAGATGACCAATGGA+AGG 0.615310 2_3:+27487401 Msa0286400:intron
CCTATGTCCGTTGATTCAAG+TGG 0.615696 2_3:+27487639 Msa0286400:CDS
TTGGATGTAGATGCGAAATG+AGG 0.619627 2_3:-27488396 None:intergenic
AAACTAAATGGTTACATCCG+GGG 0.619715 2_3:+27484322 Msa0286400:exon
CTATGTCCGTTGATTCAAGT+GGG 0.636368 2_3:+27487640 Msa0286400:CDS
CAAACTGCACATTTGACTGA+AGG 0.636685 2_3:-27486715 None:intergenic
GATCTAGAGGTTGGTAACGA+TGG 0.643835 2_3:+27484135 Msa0286400:five_prime_UTR
ATTGTCCTGTAGATGACCAA+TGG 0.647818 2_3:+27487397 Msa0286400:intron
ACAGTTTGGCTCTCAAAGTG+AGG 0.651282 2_3:-27487603 None:intergenic
AACACTATAAATCTTGTACC+AGG 0.651954 2_3:+27484461 Msa0286400:CDS
CGTAGACACACATACGTGTG+TGG 0.656589 2_3:-27484036 None:intergenic
ACATTGCTAATGCACGCACG+TGG 0.683036 2_3:+27484410 Msa0286400:CDS
TTGTCCGGCAGTTCCCACAA+CGG 0.690082 2_3:-27486669 None:intergenic
GTTACAGCAGGAACATCTCA+CGG 0.690666 2_3:-27484441 None:intergenic
GACTTGGTAAGCATGATCAG+TGG 0.699715 2_3:+27488490 Msa0286400:three_prime_UTR
TTGTGGGCGTTACAACAGAG+AGG 0.708635 2_3:+27488184 Msa0286400:CDS
TTGACTGAAGGAGCTCCATG+AGG 0.723404 2_3:-27486703 None:intergenic
GCATGATCAGTGGATCGATG+TGG 0.752002 2_3:+27488500 Msa0286400:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTGTTAGTTT+TGG + chr2_3:27487683-27487702 Msa0286400:intron 10.0%
!!! AAAACTATAAAATATTTTAC+AGG + chr2_3:27488016-27488035 Msa0286400:intron 10.0%
!! GATTTAAACTATAAACTAAA+TGG + chr2_3:27484310-27484329 Msa0286400:exon 15.0%
!!! AAACATATTAAACTTTTAGA+AGG - chr2_3:27484965-27484984 None:intergenic 15.0%
!!! TTCTAAAAGTTTAATATGTT+TGG + chr2_3:27484964-27484983 Msa0286400:intron 15.0%
!! ATTATAATTATATATCACCA+AGG + chr2_3:27485082-27485101 Msa0286400:intron 15.0%
!! TTCAAAATAATATCAAATTG+TGG - chr2_3:27485748-27485767 None:intergenic 15.0%
!!! TTTAAAACTAATCTGAATTT+CGG - chr2_3:27486369-27486388 None:intergenic 15.0%
!!! CATTACTTCAAATATATTTT+AGG + chr2_3:27487215-27487234 Msa0286400:intron 15.0%
!!! ATCAAAGTTTTTTTTTTTCA+GGG - chr2_3:27487771-27487790 None:intergenic 15.0%
!!! AATCAAAGTTTTTTTTTTTC+AGG - chr2_3:27487772-27487791 None:intergenic 15.0%
!!! AAAATATGAAATTACTGATT+TGG - chr2_3:27487987-27488006 None:intergenic 15.0%
!! AAACAATTATAGATATTCAA+TGG + chr2_3:27488560-27488579 Msa0286400:three_prime_UTR 15.0%
!! GACTAATAACAATTAACATA+GGG - chr2_3:27484165-27484184 None:intergenic 20.0%
!! GATATAATTGACTATAGATA+TGG - chr2_3:27484187-27484206 None:intergenic 20.0%
!! TATTTAGCCAATTATTAACA+AGG + chr2_3:27484218-27484237 Msa0286400:five_prime_UTR 20.0%
!! ATTTAGCCAATTATTAACAA+GGG + chr2_3:27484219-27484238 Msa0286400:five_prime_UTR 20.0%
!! TTGTAAATATATATCATACC+TGG - chr2_3:27484482-27484501 None:intergenic 20.0%
!! TTATAAATTAAGTGTATACC+AGG - chr2_3:27484614-27484633 None:intergenic 20.0%
!!! TATTAAACTTTTAGAAGGTT+TGG - chr2_3:27484960-27484979 None:intergenic 20.0%
!! TTAACTACAAAAATATTGCA+TGG - chr2_3:27485194-27485213 None:intergenic 20.0%
!!! ACAAAAATTATTGAGTTGAA+TGG - chr2_3:27485501-27485520 None:intergenic 20.0%
!!! AAGCAAAGAATTTTTTTTTC+TGG + chr2_3:27486054-27486073 Msa0286400:intron 20.0%
!!! AGCAAAGAATTTTTTTTTCT+GGG + chr2_3:27486055-27486074 Msa0286400:intron 20.0%
!! TGATTAGGAAAAAAAATCAT+AGG - chr2_3:27486264-27486283 None:intergenic 20.0%
!!! GTTTTTGTAGTTTATAGATA+AGG - chr2_3:27486309-27486328 None:intergenic 20.0%
!! TTAAAACTAATCTGAATTTC+GGG - chr2_3:27486368-27486387 None:intergenic 20.0%
!! CATTTGATTAGAATCTTTAA+AGG - chr2_3:27486641-27486660 None:intergenic 20.0%
!! TATCAAAATAGAATCTTGAT+TGG - chr2_3:27486883-27486902 None:intergenic 20.0%
!! GTTGAAAATCAGAAAATAAT+TGG + chr2_3:27486990-27487009 Msa0286400:intron 20.0%
!! ATATTTAAGAAAAGAAAGAC+AGG + chr2_3:27487094-27487113 Msa0286400:intron 20.0%
!! TATAAAAGCTTGATATAGAT+GGG + chr2_3:27487132-27487151 Msa0286400:intron 20.0%
!!! TCAAATATATTTTAGGATTC+TGG + chr2_3:27487222-27487241 Msa0286400:intron 20.0%
!! CAAAATTCACTTATTCTATA+GGG - chr2_3:27487739-27487758 None:intergenic 20.0%
!!! TCAAAGTTTTTTTTTTTCAG+GGG - chr2_3:27487770-27487789 None:intergenic 20.0%
!! ATAGTCATCTCATATTATAA+AGG - chr2_3:27487801-27487820 None:intergenic 20.0%
!!! TAATATGAGATGACTATTTT+TGG + chr2_3:27487804-27487823 Msa0286400:intron 20.0%
!!! TTAATTTTAAGAATGTGAAC+TGG + chr2_3:27488143-27488162 Msa0286400:intron 20.0%
!! AAATCAATTTAAACCTTGAA+CGG - chr2_3:27488293-27488312 None:intergenic 20.0%
!! GTATTTATATGCATTATACA+AGG + chr2_3:27488316-27488335 Msa0286400:three_prime_UTR 20.0%
!! AATTAAAAAAAGGACAAGAT+TGG - chr2_3:27488601-27488620 None:intergenic 20.0%
! TTAAATTGAAAACTCCTTCT+TGG + chr2_3:27484002-27484021 Msa0286400:five_prime_UTR 25.0%
! GGACTAATAACAATTAACAT+AGG - chr2_3:27484166-27484185 None:intergenic 25.0%
! ATAAACTAAATGGTTACATC+CGG + chr2_3:27484320-27484339 Msa0286400:exon 25.0%
! AAATACACTTAATTCATCGA+TGG + chr2_3:27484578-27484597 Msa0286400:intron 25.0%
!!! GTACAATATTTTTGGAAAGT+AGG - chr2_3:27484763-27484782 None:intergenic 25.0%
!! GCTAAACAGTACAATATTTT+TGG - chr2_3:27484771-27484790 None:intergenic 25.0%
! TCAGAAGATATTACGTTAAA+TGG - chr2_3:27485037-27485056 None:intergenic 25.0%
! AATATCTTCTGATTATTCCA+AGG + chr2_3:27485045-27485064 Msa0286400:intron 25.0%
! AATTAAAATTATGCTGTCCT+TGG - chr2_3:27485065-27485084 None:intergenic 25.0%
!! TCAACTCAATAATTTTTGTC+CGG + chr2_3:27485502-27485521 Msa0286400:intron 25.0%
! GAATGATATTATGATAGTAC+TGG + chr2_3:27485831-27485850 Msa0286400:intron 25.0%
!!! GCAAAGAATTTTTTTTTCTG+GGG + chr2_3:27486056-27486075 Msa0286400:intron 25.0%
! GCTTATTCGTTAAAAAGAAA+TGG - chr2_3:27486190-27486209 None:intergenic 25.0%
! ACAAAAACAAGATAGAATCT+TGG + chr2_3:27486321-27486340 Msa0286400:intron 25.0%
! AAAATTTACGTGTAAACTTC+AGG + chr2_3:27486485-27486504 Msa0286400:intron 25.0%
! ATATCCATAGATGAAGAAAA+TGG - chr2_3:27486546-27486565 None:intergenic 25.0%
! GTAAATTAATTCTGTTGATC+TGG + chr2_3:27486825-27486844 Msa0286400:intron 25.0%
! CTATAAAAGCTTGATATAGA+TGG + chr2_3:27487131-27487150 Msa0286400:intron 25.0%
! AAAATGCAAAATGTTGACAA+CGG - chr2_3:27487335-27487354 None:intergenic 25.0%
!! TCAACATTTTGCATTTTATG+TGG + chr2_3:27487338-27487357 Msa0286400:intron 25.0%
!!! ACTTTTGACTTTCTTTCTTT+TGG + chr2_3:27487494-27487513 Msa0286400:intron 25.0%
! CCAAAATTCACTTATTCTAT+AGG - chr2_3:27487740-27487759 None:intergenic 25.0%
!! CCTATAGAATAAGTGAATTT+TGG + chr2_3:27487737-27487756 Msa0286400:intron 25.0%
!!! TGGTTTTGATGTTTATGTTT+TGG + chr2_3:27488466-27488485 Msa0286400:three_prime_UTR 25.0%
AAACTCCTTCTTGGAATAAT+TGG + chr2_3:27484011-27484030 Msa0286400:five_prime_UTR 30.0%
TTGGCTAAATAGAGAAAGAT+GGG - chr2_3:27484209-27484228 None:intergenic 30.0%
ATTGGCTAAATAGAGAAAGA+TGG - chr2_3:27484210-27484229 None:intergenic 30.0%
ATGCATCCCTTGTTAATAAT+TGG - chr2_3:27484228-27484247 None:intergenic 30.0%
! GAACAAGTGAACTTTTAATC+TGG - chr2_3:27484287-27484306 None:intergenic 30.0%
TAAACTAAATGGTTACATCC+GGG + chr2_3:27484321-27484340 Msa0286400:exon 30.0%
GAAATGTCACAACTTTATTG+TGG + chr2_3:27484377-27484396 Msa0286400:CDS 30.0%
AAGATTTATAGTGTTACAGC+AGG - chr2_3:27484456-27484475 None:intergenic 30.0%
AACACTATAAATCTTGTACC+AGG + chr2_3:27484461-27484480 Msa0286400:CDS 30.0%
GTATTTAATGATCAAGCAAC+AGG - chr2_3:27484564-27484583 None:intergenic 30.0%
ATTAAGTGTATACCAGGATT+TGG - chr2_3:27484608-27484627 None:intergenic 30.0%
GAGTATGATGTACATATAGT+TGG - chr2_3:27484710-27484729 None:intergenic 30.0%
AATATTGTACTGTTTAGCGA+AGG + chr2_3:27484773-27484792 Msa0286400:intron 30.0%
! TATAGTTGAGACATAGGTTT+TGG + chr2_3:27485112-27485131 Msa0286400:intron 30.0%
TCAAATTATCTTTCCCAACA+TGG + chr2_3:27485145-27485164 Msa0286400:intron 30.0%
CATACACAATCAAATAGATG+AGG - chr2_3:27485812-27485831 None:intergenic 30.0%
TTGGAATTGAAACAGATCAA+GGG - chr2_3:27485911-27485930 None:intergenic 30.0%
TTCGTTAAAAAGAAATGGAG+AGG - chr2_3:27486185-27486204 None:intergenic 30.0%
! CTTTTTAACGAATAAGCAGT+TGG + chr2_3:27486193-27486212 Msa0286400:intron 30.0%
TAGGAAAAAAAATCATAGGC+TGG - chr2_3:27486260-27486279 None:intergenic 30.0%
AGATAGAATCTTGGTTCATT+TGG + chr2_3:27486330-27486349 Msa0286400:intron 30.0%
! AGTTCCATTTTCTTCATCTA+TGG + chr2_3:27486539-27486558 Msa0286400:intron 30.0%
!! GTTGTTTACTGACTTATTGT+TGG + chr2_3:27486610-27486629 Msa0286400:intron 30.0%
! GCTAAAGATTTTAGACTGAT+TGG + chr2_3:27486911-27486930 Msa0286400:intron 30.0%
ACTGATTGGATTTGAAGAAT+AGG + chr2_3:27486925-27486944 Msa0286400:intron 30.0%
!! TCAGATTACGTCATTTTGTT+CGG + chr2_3:27487013-27487032 Msa0286400:intron 30.0%
! GATTTTCTACTACTACAGTT+TGG - chr2_3:27487620-27487639 None:intergenic 30.0%
!!! GAATAAGTGAATTTTGGTTC+TGG + chr2_3:27487743-27487762 Msa0286400:intron 30.0%
! GGGAAGAAAGAATTCATTTT+AGG - chr2_3:27487946-27487965 None:intergenic 30.0%
AGGATATGGTAACTATACAA+TGG - chr2_3:27488060-27488079 None:intergenic 30.0%
! TCAAAATGAACCTATCGATT+TGG - chr2_3:27488418-27488437 None:intergenic 30.0%
!!! ATGTTTATGTTTTGGTGACT+TGG + chr2_3:27488474-27488493 Msa0286400:three_prime_UTR 30.0%
TGGATCCAATTATTCCAAGA+AGG - chr2_3:27484019-27484038 None:intergenic 35.0%
TCTACGCGTTTATGTATTGA+AGG + chr2_3:27484053-27484072 Msa0286400:five_prime_UTR 35.0%
CTTCTTGTCTGATCCAAATT+AGG + chr2_3:27484113-27484132 Msa0286400:five_prime_UTR 35.0%
TGATCCAAATTAGGATCTAG+AGG + chr2_3:27484122-27484141 Msa0286400:five_prime_UTR 35.0%
AAACTAAATGGTTACATCCG+GGG + chr2_3:27484322-27484341 Msa0286400:exon 35.0%
! TTCAGGAAATTTTAGATCCC+CGG - chr2_3:27484342-27484361 None:intergenic 35.0%
ATGTCACAACTTTATTGTGG+AGG + chr2_3:27484380-27484399 Msa0286400:CDS 35.0%
GTGTAAAAGCTGTACAAATC+TGG - chr2_3:27484515-27484534 None:intergenic 35.0%
!! ATTTTTGGAAAGTAGGTCAC+TGG - chr2_3:27484756-27484775 None:intergenic 35.0%
ATTCGGTTTCATTCAGAAGA+TGG + chr2_3:27484876-27484895 Msa0286400:intron 35.0%
TTCGGTTTCATTCAGAAGAT+GGG + chr2_3:27484877-27484896 Msa0286400:intron 35.0%
TTATATATCACCAAGGTGTG+TGG + chr2_3:27485089-27485108 Msa0286400:intron 35.0%
ATCTTTCCCAACATGGTATT+CGG + chr2_3:27485152-27485171 Msa0286400:intron 35.0%
AGGATATTAAGGATGACAGT+GGG - chr2_3:27485356-27485375 None:intergenic 35.0%
AAGGATATTAAGGATGACAG+TGG - chr2_3:27485357-27485376 None:intergenic 35.0%
!!! ATTTTTGTCCGGCCTTATTT+AGG + chr2_3:27485513-27485532 Msa0286400:intron 35.0%
! AAACTTCCAAGGTATCAAAG+TGG - chr2_3:27485567-27485586 None:intergenic 35.0%
! TACCTTGGAAGTTTCACTTT+TGG + chr2_3:27485573-27485592 Msa0286400:intron 35.0%
!! ACCTTGGAAGTTTCACTTTT+GGG + chr2_3:27485574-27485593 Msa0286400:intron 35.0%
! GGTTTTTGTACACACAATGA+TGG + chr2_3:27485595-27485614 Msa0286400:intron 35.0%
ACTCGGGGATACAAAAAATT+AGG - chr2_3:27485667-27485686 None:intergenic 35.0%
TTTGATGCCATATAAGGACT+CGG - chr2_3:27485684-27485703 None:intergenic 35.0%
AGACTGTTTGATGCCATATA+AGG - chr2_3:27485690-27485709 None:intergenic 35.0%
TCAAACAGTCTCTTCAAGAA+TGG + chr2_3:27485699-27485718 Msa0286400:intron 35.0%
GGAATAACAAACTGAACCTA+TGG - chr2_3:27485727-27485746 None:intergenic 35.0%
TACTGGTATCAAGACAGTAA+AGG + chr2_3:27485848-27485867 Msa0286400:intron 35.0%
CTTGGAATTGAAACAGATCA+AGG - chr2_3:27485912-27485931 None:intergenic 35.0%
TGATGATTGTGGAGTTGTTA+AGG - chr2_3:27485960-27485979 None:intergenic 35.0%
TGTCTAAGCAATGATGATTG+TGG - chr2_3:27485971-27485990 None:intergenic 35.0%
GATCTTTAACTCTCGTATCA+TGG + chr2_3:27485991-27486010 Msa0286400:intron 35.0%
! GCAAGTGGATGATATTGATT+AGG - chr2_3:27486279-27486298 None:intergenic 35.0%
AGATAAGGAATTACTGCAAG+TGG - chr2_3:27486294-27486313 None:intergenic 35.0%
ATCCACATAGCTCAATAATG+AGG + chr2_3:27486448-27486467 Msa0286400:intron 35.0%
TCCACATAGCTCAATAATGA+GGG + chr2_3:27486449-27486468 Msa0286400:intron 35.0%
AACAACTTAGCATGCATGAT+TGG - chr2_3:27486596-27486615 None:intergenic 35.0%
AAATGAACCATATCCGTTGT+GGG + chr2_3:27486656-27486675 Msa0286400:CDS 35.0%
TCGATGTAAGTGTACATTGA+TGG + chr2_3:27486755-27486774 Msa0286400:intron 35.0%
!! CAGATTACGTCATTTTGTTC+GGG + chr2_3:27487014-27487033 Msa0286400:intron 35.0%
TTAGGATTCTGGTACTTGTA+TGG + chr2_3:27487233-27487252 Msa0286400:intron 35.0%
ACGGATATCAAGTAAATTGC+AGG - chr2_3:27487316-27487335 None:intergenic 35.0%
! TCATATCTTTTACCCTTTCC+TGG + chr2_3:27487374-27487393 Msa0286400:intron 35.0%
CAATTTCCCACTTGAATCAA+CGG - chr2_3:27487649-27487668 None:intergenic 35.0%
AGTTAAAGAATGTCACGTGT+CGG - chr2_3:27487836-27487855 None:intergenic 35.0%
TATCAGTAGTGATTAGACAC+AGG - chr2_3:27487860-27487879 None:intergenic 35.0%
ATATGTCATGTCATCTCGAA+TGG + chr2_3:27487877-27487896 Msa0286400:intron 35.0%
GGTAGAGTACAGAAATTAGT+TGG - chr2_3:27487905-27487924 None:intergenic 35.0%
GAATTCTTTCTTCCCTCAAA+TGG + chr2_3:27487951-27487970 Msa0286400:intron 35.0%
!! CTGATGCTTTAAAACGTTGT+TGG + chr2_3:27488216-27488235 Msa0286400:three_prime_UTR 35.0%
!! TGTTGGTTTATGTGATGTTG+AGG + chr2_3:27488233-27488252 Msa0286400:three_prime_UTR 35.0%
GACTTCAATTCAATCATTGC+AGG - chr2_3:27488259-27488278 None:intergenic 35.0%
TAAACATCAAAACCACATCC+AGG - chr2_3:27488461-27488480 None:intergenic 35.0%
CGCGTTTATGTATTGAAGGT+AGG + chr2_3:27484057-27484076 Msa0286400:five_prime_UTR 40.0%
CCAACCTCTAGATCCTAATT+TGG - chr2_3:27484129-27484148 None:intergenic 40.0%
CCAAATTAGGATCTAGAGGT+TGG + chr2_3:27484126-27484145 Msa0286400:five_prime_UTR 40.0%
ATCGATGGTATACCAAATCC+TGG + chr2_3:27484593-27484612 Msa0286400:intron 40.0%
TAGCTTGAAATACACCGCAA+GGG - chr2_3:27484656-27484675 None:intergenic 40.0%
ATAGCTTGAAATACACCGCA+AGG - chr2_3:27484657-27484676 None:intergenic 40.0%
! CCAAAGGGTTTTTGCACAAA+GGG - chr2_3:27484830-27484849 None:intergenic 40.0%
CCTTTGTGCAAAAACCCTTT+GGG + chr2_3:27484828-27484847 Msa0286400:intron 40.0%
! AACCCTTTGGGTTTGAAATG+TGG + chr2_3:27484840-27484859 Msa0286400:intron 40.0%
GTCCACATTTCAAACCCAAA+GGG - chr2_3:27484845-27484864 None:intergenic 40.0%
TGTCCACATTTCAAACCCAA+AGG - chr2_3:27484846-27484865 None:intergenic 40.0%
! TTGGGTTTGAAATGTGGACA+TGG + chr2_3:27484846-27484865 Msa0286400:intron 40.0%
! GTTTGAAATGTGGACATGGT+GGG + chr2_3:27484850-27484869 Msa0286400:intron 40.0%
! TTTGAAATGTGGACATGGTG+GGG + chr2_3:27484851-27484870 Msa0286400:intron 40.0%
! GAAAAGGGTTGACTTTCGAT+CGG + chr2_3:27484903-27484922 Msa0286400:intron 40.0%
!! CTTTTAGAAGGTTTGGTCGT+GGG - chr2_3:27484953-27484972 None:intergenic 40.0%
!! ACTTTTAGAAGGTTTGGTCG+TGG - chr2_3:27484954-27484973 None:intergenic 40.0%
GTGTGGTATAGTTGAGACAT+AGG + chr2_3:27485106-27485125 Msa0286400:intron 40.0%
ATGGATCCGAATACCATGTT+GGG - chr2_3:27485161-27485180 None:intergenic 40.0%
TATGGATCCGAATACCATGT+TGG - chr2_3:27485162-27485181 None:intergenic 40.0%
GTATTCGGATCCATACTTGA+TGG + chr2_3:27485167-27485186 Msa0286400:intron 40.0%
ATTGCATGGTCCATCAAGTA+TGG - chr2_3:27485180-27485199 None:intergenic 40.0%
TACACTGAGCACAGTAGATA+GGG - chr2_3:27485245-27485264 None:intergenic 40.0%
CAATGCAGAGGAAAGAGAAA+AGG - chr2_3:27485281-27485300 None:intergenic 40.0%
GGATATTAAGGATGACAGTG+GGG - chr2_3:27485355-27485374 None:intergenic 40.0%
TGGACACGCTAAGGATATTA+AGG - chr2_3:27485367-27485386 None:intergenic 40.0%
TTGACAACCAGATAGAAACC+AGG - chr2_3:27485468-27485487 None:intergenic 40.0%
TGGTTTCTATCTGGTTGTCA+AGG + chr2_3:27485467-27485486 Msa0286400:intron 40.0%
GGTTTCTATCTGGTTGTCAA+GGG + chr2_3:27485468-27485487 Msa0286400:intron 40.0%
! CAAGGTATCAAAGTGGCTTT+GGG - chr2_3:27485560-27485579 None:intergenic 40.0%
ACCCAAAAGTGAAACTTCCA+AGG - chr2_3:27485578-27485597 None:intergenic 40.0%
CACAGTATGGGTGAAAACAA+GGG - chr2_3:27485627-27485646 None:intergenic 40.0%
ACACAGTATGGGTGAAAACA+AGG - chr2_3:27485628-27485647 None:intergenic 40.0%
! TGTTTTCACCCATACTGTGT+TGG + chr2_3:27485628-27485647 Msa0286400:intron 40.0%
AGACTCAACCAACACAGTAT+GGG - chr2_3:27485639-27485658 None:intergenic 40.0%
AAGACTCAACCAACACAGTA+TGG - chr2_3:27485640-27485659 None:intergenic 40.0%
TTGATGCCATATAAGGACTC+GGG - chr2_3:27485683-27485702 None:intergenic 40.0%
CTCTTCAAGAATGGTTCCAT+AGG + chr2_3:27485708-27485727 Msa0286400:intron 40.0%
ATTGTGGAGTTGTTAAGGAG+CGG - chr2_3:27485955-27485974 None:intergenic 40.0%
! ATTTGTCTGAGATGTGTCCA+TGG + chr2_3:27486014-27486033 Msa0286400:intron 40.0%
! AACCACCCAACTATTGGTTA+TGG + chr2_3:27486158-27486177 Msa0286400:intron 40.0%
! ACCACCCAACTATTGGTTAT+GGG + chr2_3:27486159-27486178 Msa0286400:intron 40.0%
CGTGTAAACTTCAGGATGTT+TGG + chr2_3:27486493-27486512 Msa0286400:intron 40.0%
CAAATGAACCATATCCGTTG+TGG + chr2_3:27486655-27486674 Msa0286400:CDS 40.0%
ACAACACTCATGTATCCTCA+TGG + chr2_3:27486688-27486707 Msa0286400:CDS 40.0%
CAAACTGCACATTTGACTGA+AGG - chr2_3:27486718-27486737 None:intergenic 40.0%
TTGTTCGGGCTTCAATTTGT+TGG + chr2_3:27487028-27487047 Msa0286400:intron 40.0%
! TGTTCGGGCTTCAATTTGTT+GGG + chr2_3:27487029-27487048 Msa0286400:intron 40.0%
GAAAAGAAAGACAGGATCGT+AGG + chr2_3:27487102-27487121 Msa0286400:intron 40.0%
CAAGTAAATTGCAGGCATAG+AGG - chr2_3:27487308-27487327 None:intergenic 40.0%
ATTGTCCTGTAGATGACCAA+TGG + chr2_3:27487397-27487416 Msa0286400:intron 40.0%
GTTTCATTAGGTGTCAGTAC+AGG - chr2_3:27487436-27487455 None:intergenic 40.0%
TGCAGTAGAAGATACCGTTT+CGG - chr2_3:27487467-27487486 None:intergenic 40.0%
!! CTATGTCCGTTGATTCAAGT+GGG + chr2_3:27487640-27487659 Msa0286400:CDS 40.0%
!! CGTTGATTCAAGTGGGAAAT+TGG + chr2_3:27487647-27487666 Msa0286400:CDS 40.0%
TCTTCCCTCAAATGGATGTT+TGG + chr2_3:27487959-27487978 Msa0286400:intron 40.0%
CTTCCCTCAAATGGATGTTT+GGG + chr2_3:27487960-27487979 Msa0286400:intron 40.0%
CCAGTAGAAAATGCAGGATA+TGG - chr2_3:27488074-27488093 None:intergenic 40.0%
! CCATATCCTGCATTTTCTAC+TGG + chr2_3:27488071-27488090 Msa0286400:intron 40.0%
ACTGAACCAGTAGAAAATGC+AGG - chr2_3:27488080-27488099 None:intergenic 40.0%
TTAAGAATGTGAACTGGCAC+AGG + chr2_3:27488149-27488168 Msa0286400:intron 40.0%
ACAGGTAAGCAATGTTGTTG+TGG + chr2_3:27488167-27488186 Msa0286400:intron 40.0%
CAGGTAAGCAATGTTGTTGT+GGG + chr2_3:27488168-27488187 Msa0286400:intron 40.0%
TTGGATGTAGATGCGAAATG+AGG - chr2_3:27488399-27488418 None:intergenic 40.0%
GCATCTACATCCAAATCGAT+AGG + chr2_3:27488405-27488424 Msa0286400:three_prime_UTR 40.0%
TTGTCTCGAATTACAAGTCC+TGG + chr2_3:27488440-27488459 Msa0286400:three_prime_UTR 40.0%
!! GATCTAGAGGTTGGTAACGA+TGG + chr2_3:27484135-27484154 Msa0286400:five_prime_UTR 45.0%
! AAATTTCCTGAAGTGCCTGC+AGG + chr2_3:27484350-27484369 Msa0286400:CDS 45.0%
TGTGACATTTCCATTCCTGC+AGG - chr2_3:27484368-27484387 None:intergenic 45.0%
GTTACAGCAGGAACATCTCA+CGG - chr2_3:27484444-27484463 None:intergenic 45.0%
TCCTTTCTTCTTTCCCCTTG+CGG + chr2_3:27484639-27484658 Msa0286400:intron 45.0%
AGCTTGAAATACACCGCAAG+GGG - chr2_3:27484655-27484674 None:intergenic 45.0%
TTGGAAAGTAGGTCACTGGA+AGG - chr2_3:27484752-27484771 None:intergenic 45.0%
CCCTTTGTGCAAAAACCCTT+TGG + chr2_3:27484827-27484846 Msa0286400:intron 45.0%
! CCCAAAGGGTTTTTGCACAA+AGG - chr2_3:27484831-27484850 None:intergenic 45.0%
! GGTTTGAAATGTGGACATGG+TGG + chr2_3:27484849-27484868 Msa0286400:intron 45.0%
TTCAGAAGATGGGAGCGAAA+AGG + chr2_3:27484887-27484906 Msa0286400:intron 45.0%
TCAGAAGATGGGAGCGAAAA+GGG + chr2_3:27484888-27484907 Msa0286400:intron 45.0%
CTCAACTATACCACACACCT+TGG - chr2_3:27485102-27485121 None:intergenic 45.0%
GTACACTGAGCACAGTAGAT+AGG - chr2_3:27485246-27485265 None:intergenic 45.0%
AAAGAGAAAAGGCTACACCG+AGG - chr2_3:27485270-27485289 None:intergenic 45.0%
TCTCTTTCCTCTGCATTGCT+TGG + chr2_3:27485283-27485302 Msa0286400:intron 45.0%
TTTCCTCTGCATTGCTTGGT+GGG + chr2_3:27485287-27485306 Msa0286400:intron 45.0%
ATTAAGGATGACAGTGGGGT+AGG - chr2_3:27485351-27485370 None:intergenic 45.0%
AACAGAAACCTTGCAGGATG+TGG - chr2_3:27485430-27485449 None:intergenic 45.0%
AAGGTTTCTGTTCCCTTGCT+TGG + chr2_3:27485438-27485457 Msa0286400:intron 45.0%
! CCAAGGTATCAAAGTGGCTT+TGG - chr2_3:27485561-27485580 None:intergenic 45.0%
! CCAAAGCCACTTTGATACCT+TGG + chr2_3:27485558-27485577 Msa0286400:intron 45.0%
TGTATCCCCGAGTCCTTATA+TGG + chr2_3:27485674-27485693 Msa0286400:intron 45.0%
TGATGCCATATAAGGACTCG+GGG - chr2_3:27485682-27485701 None:intergenic 45.0%
GTGTAGCACTTAGCAGTAGA+AGG - chr2_3:27485780-27485799 None:intergenic 45.0%
ATCAAATAGATGAGGCCCCA+AGG - chr2_3:27485804-27485823 None:intergenic 45.0%
CAGACTTCTCGAAAGTAGCT+TGG - chr2_3:27485930-27485949 None:intergenic 45.0%
! CAAGCTACTTTCGAGAAGTC+TGG + chr2_3:27485928-27485947 Msa0286400:intron 45.0%
TTGTGGAGTTGTTAAGGAGC+GGG - chr2_3:27485954-27485973 None:intergenic 45.0%
TCGTACAAGTGTCAGACACA+AGG + chr2_3:27486095-27486114 Msa0286400:intron 45.0%
ACAAGGACACACACAATCTC+AGG + chr2_3:27486112-27486131 Msa0286400:intron 45.0%
CAAGGACACACACAATCTCA+GGG + chr2_3:27486113-27486132 Msa0286400:intron 45.0%
AAGGACACACACAATCTCAG+GGG + chr2_3:27486114-27486133 Msa0286400:intron 45.0%
GCTAACAACCACCCAACTAT+TGG + chr2_3:27486152-27486171 Msa0286400:intron 45.0%
GAGGCCCATAACCAATAGTT+GGG - chr2_3:27486166-27486185 None:intergenic 45.0%
AGAGGCCCATAACCAATAGT+TGG - chr2_3:27486167-27486186 None:intergenic 45.0%
GCCCTCATTATTGAGCTATG+TGG - chr2_3:27486453-27486472 None:intergenic 45.0%
! GAGGATACATGAGTGTTGTC+CGG - chr2_3:27486687-27486706 None:intergenic 45.0%
CTACAGGACAATCCAGGAAA+GGG - chr2_3:27487389-27487408 None:intergenic 45.0%
TCTACAGGACAATCCAGGAA+AGG - chr2_3:27487390-27487409 None:intergenic 45.0%
TCCTGTAGATGACCAATGGA+AGG + chr2_3:27487401-27487420 Msa0286400:intron 45.0%
TTAGGTGTCAGTACAGGAGT+TGG - chr2_3:27487430-27487449 None:intergenic 45.0%
! TCGGAGCTGGTTGTTTCATT+AGG - chr2_3:27487448-27487467 None:intergenic 45.0%
TGAAACAACCAGCTCCGAAA+CGG + chr2_3:27487450-27487469 Msa0286400:CDS 45.0%
AAAGTGAGGTCTTGACTGCA+GGG - chr2_3:27487592-27487611 None:intergenic 45.0%
!! ACAGTTTGGCTCTCAAAGTG+AGG - chr2_3:27487606-27487625 None:intergenic 45.0%
CCACTTGAATCAACGGACAT+AGG - chr2_3:27487642-27487661 None:intergenic 45.0%
!! CCTATGTCCGTTGATTCAAG+TGG + chr2_3:27487639-27487658 Msa0286400:CDS 45.0%
! GTACTCTACCGTAACTTGCA+CGG + chr2_3:27487915-27487934 Msa0286400:intron 45.0%
AGGAGAATCCGTGCAAGTTA+CGG - chr2_3:27487926-27487945 None:intergenic 45.0%
GGTCCCAAACATCCATTTGA+GGG - chr2_3:27487966-27487985 None:intergenic 45.0%
TGGTCCCAAACATCCATTTG+AGG - chr2_3:27487967-27487986 None:intergenic 45.0%
TCTAGACTCTTCTCCGTTCA+AGG + chr2_3:27488277-27488296 Msa0286400:three_prime_UTR 45.0%
CGAATTACAAGTCCTGGATG+TGG + chr2_3:27488446-27488465 Msa0286400:three_prime_UTR 45.0%
! GACTTGGTAAGCATGATCAG+TGG + chr2_3:27488490-27488509 Msa0286400:three_prime_UTR 45.0%
CGTAGACACACATACGTGTG+TGG - chr2_3:27484039-27484058 None:intergenic 50.0%
ACATTGCTAATGCACGCACG+TGG + chr2_3:27484410-27484429 Msa0286400:CDS 50.0%
ACCGCAAGGGGAAAGAAGAA+AGG - chr2_3:27484643-27484662 None:intergenic 50.0%
! GTGGACATGGTGGGGAAATT+CGG + chr2_3:27484859-27484878 Msa0286400:intron 50.0%
! AGGGTTGACTTTCGATCGGT+TGG + chr2_3:27484907-27484926 Msa0286400:intron 50.0%
TGAGCACAGTAGATAGGGCA+GGG - chr2_3:27485240-27485259 None:intergenic 50.0%
ACTGTGCTCAGTGTACACCT+CGG + chr2_3:27485250-27485269 Msa0286400:intron 50.0%
CTTTCCTCTGCATTGCTTGG+TGG + chr2_3:27485286-27485305 Msa0286400:intron 50.0%
! TTCCTCTGCATTGCTTGGTG+GGG + chr2_3:27485288-27485307 Msa0286400:intron 50.0%
TGGGGCTGTAGAGTTACTGT+TGG + chr2_3:27485306-27485325 Msa0286400:intron 50.0%
GCTTCATTTGCAGCACACCA+TGG - chr2_3:27485395-27485414 None:intergenic 50.0%
AGAAACCTTGCAGGATGTGG+TGG - chr2_3:27485427-27485446 None:intergenic 50.0%
CAAGGGAACAGAAACCTTGC+AGG - chr2_3:27485436-27485455 None:intergenic 50.0%
AAACCAGGTGCACCAAGCAA+GGG - chr2_3:27485453-27485472 None:intergenic 50.0%
TGGTGCACCTGGTTTCTATC+TGG + chr2_3:27485458-27485477 Msa0286400:intron 50.0%
GCTAAGGGCCTAAATAAGGC+CGG - chr2_3:27485524-27485543 None:intergenic 50.0%
!! GCCTTATTTAGGCCCTTAGC+TGG + chr2_3:27485524-27485543 Msa0286400:intron 50.0%
GCCAGCTAAGGGCCTAAATA+AGG - chr2_3:27485528-27485547 None:intergenic 50.0%
TGCTAAGTGCTACACGCCTT+GGG + chr2_3:27485785-27485804 Msa0286400:intron 50.0%
! GATGTGTCCATGGAGTGCTA+AGG + chr2_3:27486024-27486043 Msa0286400:intron 50.0%
GCCCATAACCAATAGTTGGG+TGG - chr2_3:27486163-27486182 None:intergenic 50.0%
ATATCCGTTGTGGGAACTGC+CGG + chr2_3:27486665-27486684 Msa0286400:CDS 50.0%
TTGACTGAAGGAGCTCCATG+AGG - chr2_3:27486706-27486725 None:intergenic 50.0%
CTCATGACAGTCGCGTGTTA+TGG - chr2_3:27487271-27487290 None:intergenic 50.0%
GGTCATCTACAGGACAATCC+AGG - chr2_3:27487395-27487414 None:intergenic 50.0%
GCCTTCCATTGGTCATCTAC+AGG - chr2_3:27487405-27487424 None:intergenic 50.0%
AGAAGATACCGTTTCGGAGC+TGG - chr2_3:27487461-27487480 None:intergenic 50.0%
CAAAGTGAGGTCTTGACTGC+AGG - chr2_3:27487593-27487612 None:intergenic 50.0%
TTGTGGGCGTTACAACAGAG+AGG + chr2_3:27488184-27488203 Msa0286400:CDS 50.0%
GCATGATCAGTGGATCGATG+TGG + chr2_3:27488500-27488519 Msa0286400:three_prime_UTR 50.0%
! TCCTGAAGTGCCTGCAGGAA+TGG + chr2_3:27484355-27484374 Msa0286400:CDS 55.0%
TCCATTCCTGCAGGCACTTC+AGG - chr2_3:27484359-27484378 None:intergenic 55.0%
! AGAAGGTTTGGTCGTGGGCA+TGG - chr2_3:27484948-27484967 None:intergenic 55.0%
GAGCACAGTAGATAGGGCAG+GGG - chr2_3:27485239-27485258 None:intergenic 55.0%
CTGAGCACAGTAGATAGGGC+AGG - chr2_3:27485241-27485260 None:intergenic 55.0%
ATGGTGCACTGGACACGCTA+AGG - chr2_3:27485376-27485395 None:intergenic 55.0%
TTAGCGTGTCCAGTGCACCA+TGG + chr2_3:27485375-27485394 Msa0286400:intron 55.0%
GTGTACCACCACATCCTGCA+AGG + chr2_3:27485419-27485438 Msa0286400:intron 55.0%
GAAACCAGGTGCACCAAGCA+AGG - chr2_3:27485454-27485473 None:intergenic 55.0%
!! AAGTGGCTTTGGGCAAGTGC+TGG - chr2_3:27485550-27485569 None:intergenic 55.0%
CTGCTAAGTGCTACACGCCT+TGG + chr2_3:27485784-27485803 Msa0286400:intron 55.0%
GCTAAGTGCTACACGCCTTG+GGG + chr2_3:27485786-27485805 Msa0286400:intron 55.0%
CGACACACCTTAGCACTCCA+TGG - chr2_3:27486034-27486053 None:intergenic 55.0%
GGCAGTTCCCACAACGGATA+TGG - chr2_3:27486666-27486685 None:intergenic 55.0%
TTGTCCGGCAGTTCCCACAA+CGG - chr2_3:27486672-27486691 None:intergenic 55.0%
ACACGCGACTGTCATGAGCA+CGG + chr2_3:27487273-27487292 Msa0286400:intron 55.0%
GGTGTCAGTACAGGAGTTGG+CGG - chr2_3:27487427-27487446 None:intergenic 55.0%
AGCCCCACCAAGCAATGCAG+AGG - chr2_3:27485293-27485312 None:intergenic 60.0%
TGCAGCACACCATGGTGCAC+TGG - chr2_3:27485387-27485406 None:intergenic 60.0%
!! GTTCCCTTGCTTGGTGCACC+TGG + chr2_3:27485447-27485466 Msa0286400:intron 60.0%
!! GGCAAGTGCTGGCCAGCTAA+GGG - chr2_3:27485539-27485558 None:intergenic 60.0%
CACGCGACTGTCATGAGCAC+GGG + chr2_3:27487274-27487293 Msa0286400:intron 60.0%
AGGAGTTGGCGGCCTTCCAT+TGG - chr2_3:27487416-27487435 None:intergenic 60.0%
!! GGGCAAGTGCTGGCCAGCTA+AGG - chr2_3:27485540-27485559 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 27484001 27488625 27484001 ID=Msa0286400;Name=Msa0286400
chr2_3 mRNA 27484001 27488625 27484001 ID=Msa0286400-mRNA-1;Parent=Msa0286400;Name=Msa0286400-mRNA-1;_AED=0.16;_eAED=0.16;_QI=328|1|1|1|0.75|1|5|413|147
chr2_3 exon 27484001 27484482 27484001 ID=Msa0286400-mRNA-1:exon:9825;Parent=Msa0286400-mRNA-1
chr2_3 exon 27486647 27486759 27486647 ID=Msa0286400-mRNA-1:exon:9826;Parent=Msa0286400-mRNA-1
chr2_3 exon 27487409 27487471 27487409 ID=Msa0286400-mRNA-1:exon:9827;Parent=Msa0286400-mRNA-1
chr2_3 exon 27487597 27487668 27487597 ID=Msa0286400-mRNA-1:exon:9828;Parent=Msa0286400-mRNA-1
chr2_3 exon 27488171 27488625 27488171 ID=Msa0286400-mRNA-1:exon:9829;Parent=Msa0286400-mRNA-1
chr2_3 five_prime_UTR 27484001 27484328 27484001 ID=Msa0286400-mRNA-1:five_prime_utr;Parent=Msa0286400-mRNA-1
chr2_3 CDS 27484329 27484482 27484329 ID=Msa0286400-mRNA-1:cds;Parent=Msa0286400-mRNA-1
chr2_3 CDS 27486647 27486759 27486647 ID=Msa0286400-mRNA-1:cds;Parent=Msa0286400-mRNA-1
chr2_3 CDS 27487409 27487471 27487409 ID=Msa0286400-mRNA-1:cds;Parent=Msa0286400-mRNA-1
chr2_3 CDS 27487597 27487668 27487597 ID=Msa0286400-mRNA-1:cds;Parent=Msa0286400-mRNA-1
chr2_3 CDS 27488171 27488212 27488171 ID=Msa0286400-mRNA-1:cds;Parent=Msa0286400-mRNA-1
chr2_3 three_prime_UTR 27488213 27488625 27488213 ID=Msa0286400-mRNA-1:three_prime_utr;Parent=Msa0286400-mRNA-1
Gene Sequence

>Msa0286400

ATGGTTACATCCGGGGATCTAAAATTTCCTGAAGTGCCTGCAGGAATGGAAATGTCACAACTTTATTGTGGAGGTTGTAGAACATTGCTAATGCACGCACGTGGAGCTACTACCGTGAGATGTTCCTGCTGTAACACTATAAATCTTGTACCAGATTCTAATCAAATGAACCATATCCGTTGTGGGAACTGCCGGACAACACTCATGTATCCTCATGGAGCTCCTTCAGTCAAATGTGCAGTTTGTCACTATATTACTAATGTCGATATGACCAATGGAAGGCCGCCAACTCCTGTACTGACACCTAATGAAACAACCAGCTCCGAAACGTCAAGACCTCACTTTGAGAGCCAAACTGTAGTAGTAGAAAATCCTATGTCCGTTGATTCAAGTGGGAAATTGGTAAGCAATGTTGTTGTGGGCGTTACAACAGAGAGGAAATGA
Protein sequence

>Msa0286400

MVTSGDLKFPEVPAGMEMSQLYCGGCRTLLMHARGATTVRCSCCNTINLVPDSNQMNHIRCGNCRTTLMYPHGAPSVKCAVCHYITNVDMTNGRPPTPVLTPNETTSSETSRPHFESQTVVVENPMSVDSSGKLVSNVVVGVTTERK*