Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486570 | XP_013460071.1 | 89.143 | 175 | 6 | 2 | 1 | 174 | 1 | 163 | 2.79e-79 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486570 | B7FM91 | 89.143 | 175 | 6 | 2 | 1 | 174 | 1 | 163 | 1.33e-79 | 243 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003280 | Msa0486570 | 0.834439 | 2.995961e-56 | -8.615850e-47 |
| Msa0003470 | Msa0486570 | 0.862237 | 5.842467e-64 | -8.615850e-47 |
| Msa0007450 | Msa0486570 | 0.804923 | 1.711284e-49 | -8.615850e-47 |
| Msa0008850 | Msa0486570 | 0.839329 | 1.691236e-57 | -8.615850e-47 |
| Msa0017120 | Msa0486570 | 0.857290 | 1.805126e-62 | -8.615850e-47 |
| Msa0024680 | Msa0486570 | 0.802843 | 4.628079e-49 | -8.615850e-47 |
| Msa0027540 | Msa0486570 | 0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa0030000 | Msa0486570 | 0.832642 | 8.411446e-56 | -8.615850e-47 |
| Msa0030310 | Msa0486570 | 0.814087 | 1.842164e-51 | -8.615850e-47 |
| Msa0030730 | Msa0486570 | 0.827841 | 1.251617e-54 | -8.615850e-47 |
| Msa0037820 | Msa0486570 | 0.814663 | 1.373842e-51 | -8.615850e-47 |
| Msa0041540 | Msa0486570 | 0.809105 | 2.230134e-50 | -8.615850e-47 |
| Msa0043680 | Msa0486570 | 0.844870 | 5.782616e-59 | -8.615850e-47 |
| Msa0044240 | Msa0486570 | -0.806646 | 7.436436e-50 | -8.615850e-47 |
| Msa0047470 | Msa0486570 | 0.831237 | 1.871011e-55 | -8.615850e-47 |
| Msa0050730 | Msa0486570 | 0.808074 | 3.703478e-50 | -8.615850e-47 |
| Msa0055280 | Msa0486570 | 0.801096 | 1.057770e-48 | -8.615850e-47 |
| Msa0056040 | Msa0486570 | 0.815986 | 6.978805e-52 | -8.615850e-47 |
| Msa0057260 | Msa0486570 | 0.828408 | 9.143187e-55 | -8.615850e-47 |
| Msa0060600 | Msa0486570 | 0.825366 | 4.875232e-54 | -8.615850e-47 |
| Msa0065390 | Msa0486570 | 0.856325 | 3.472246e-62 | -8.615850e-47 |
| Msa0077910 | Msa0486570 | 0.807498 | 4.907878e-50 | -8.615850e-47 |
| Msa0078520 | Msa0486570 | 0.834403 | 3.058797e-56 | -8.615850e-47 |
| Msa0079250 | Msa0486570 | 0.850736 | 1.400123e-60 | -8.615850e-47 |
| Msa0084680 | Msa0486570 | 0.829145 | 6.063936e-55 | -8.615850e-47 |
| Msa0089210 | Msa0486570 | 0.811647 | 6.304620e-51 | -8.615850e-47 |
| Msa0092660 | Msa0486570 | 0.844055 | 9.578515e-59 | -8.615850e-47 |
| Msa0092680 | Msa0486570 | 0.825328 | 4.975906e-54 | -8.615850e-47 |
| Msa0092730 | Msa0486570 | 0.843752 | 1.155092e-58 | -8.615850e-47 |
| Msa0094420 | Msa0486570 | 0.820148 | 7.994460e-53 | -8.615850e-47 |
| Msa0097980 | Msa0486570 | 0.821736 | 3.445884e-53 | -8.615850e-47 |
| Msa0100250 | Msa0486570 | 0.800985 | 1.114603e-48 | -8.615850e-47 |
| Msa0102410 | Msa0486570 | 0.805855 | 1.091364e-49 | -8.615850e-47 |
| Msa0103780 | Msa0486570 | 0.822701 | 2.058005e-53 | -8.615850e-47 |
| Msa0104420 | Msa0486570 | 0.816490 | 5.384925e-52 | -8.615850e-47 |
| Msa0105340 | Msa0486570 | 0.815572 | 8.632763e-52 | -8.615850e-47 |
| Msa0110710 | Msa0486570 | 0.855826 | 4.861740e-62 | -8.615850e-47 |
| Msa0113160 | Msa0486570 | 0.800908 | 1.155853e-48 | -8.615850e-47 |
| Msa0125230 | Msa0486570 | 0.849782 | 2.592803e-60 | -8.615850e-47 |
| Msa0125800 | Msa0486570 | 0.818974 | 1.480871e-52 | -8.615850e-47 |
| Msa0126300 | Msa0486570 | 0.848327 | 6.576503e-60 | -8.615850e-47 |
| Msa0126900 | Msa0486570 | 0.804442 | 2.156300e-49 | -8.615850e-47 |
| Msa0135980 | Msa0486570 | 0.816695 | 4.842214e-52 | -8.615850e-47 |
| Msa0137600 | Msa0486570 | 0.842984 | 1.852128e-58 | -8.615850e-47 |
| Msa0141670 | Msa0486570 | 0.816695 | 4.842954e-52 | -8.615850e-47 |
| Msa0141830 | Msa0486570 | 0.833005 | 6.836874e-56 | -8.615850e-47 |
| Msa0143080 | Msa0486570 | 0.861206 | 1.207163e-63 | -8.615850e-47 |
| Msa0143490 | Msa0486570 | 0.806658 | 7.393277e-50 | -8.615850e-47 |
| Msa0143970 | Msa0486570 | 0.813694 | 2.248782e-51 | -8.615850e-47 |
| Msa0145950 | Msa0486570 | 0.810223 | 1.282901e-50 | -8.615850e-47 |
| Msa0146020 | Msa0486570 | 0.806839 | 6.767531e-50 | -8.615850e-47 |
| Msa0146470 | Msa0486570 | 0.848894 | 4.580198e-60 | -8.615850e-47 |
| Msa0150210 | Msa0486570 | 0.834346 | 3.160878e-56 | -8.615850e-47 |
| Msa0157020 | Msa0486570 | 0.862945 | 3.536096e-64 | -8.615850e-47 |
| Msa0159560 | Msa0486570 | 0.808310 | 3.297468e-50 | -8.615850e-47 |
| Msa0170440 | Msa0486570 | 0.810398 | 1.176049e-50 | -8.615850e-47 |
| Msa0178940 | Msa0486570 | 0.827580 | 1.446259e-54 | -8.615850e-47 |
| Msa0183620 | Msa0486570 | 0.816636 | 4.994041e-52 | -8.615850e-47 |
| Msa0185390 | Msa0486570 | 0.857587 | 1.474641e-62 | -8.615850e-47 |
| Msa0194970 | Msa0486570 | 0.832907 | 7.232388e-56 | -8.615850e-47 |
| Msa0203520 | Msa0486570 | 0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0207000 | Msa0486570 | 0.814882 | 1.228194e-51 | -8.615850e-47 |
| Msa0222070 | Msa0486570 | 0.815311 | 9.867380e-52 | -8.615850e-47 |
| Msa0222120 | Msa0486570 | 0.818917 | 1.525727e-52 | -8.615850e-47 |
| Msa0223100 | Msa0486570 | 0.801174 | 1.019625e-48 | -8.615850e-47 |
| Msa0230400 | Msa0486570 | 0.810167 | 1.318504e-50 | -8.615850e-47 |
| Msa0236980 | Msa0486570 | 0.843492 | 1.355456e-58 | -8.615850e-47 |
| Msa0369780 | Msa0486570 | 0.820618 | 6.235450e-53 | -8.615850e-47 |
| Msa0376510 | Msa0486570 | 0.804950 | 1.689318e-49 | -8.615850e-47 |
| Msa0377560 | Msa0486570 | 0.811084 | 8.356894e-51 | -8.615850e-47 |
| Msa0378340 | Msa0486570 | 0.813608 | 2.348532e-51 | -8.615850e-47 |
| Msa0380060 | Msa0486570 | 0.810062 | 1.389389e-50 | -8.615850e-47 |
| Msa0380420 | Msa0486570 | 0.810602 | 1.062573e-50 | -8.615850e-47 |
| Msa0382500 | Msa0486570 | 0.837713 | 4.419613e-57 | -8.615850e-47 |
| Msa0387790 | Msa0486570 | 0.805136 | 1.544494e-49 | -8.615850e-47 |
| Msa0393540 | Msa0486570 | 0.811821 | 5.777938e-51 | -8.615850e-47 |
| Msa0408250 | Msa0486570 | -0.813916 | 2.008345e-51 | -8.615850e-47 |
| Msa0411520 | Msa0486570 | 0.868760 | 5.140087e-66 | -8.615850e-47 |
| Msa0415930 | Msa0486570 | 0.800682 | 1.285176e-48 | -8.615850e-47 |
| Msa0416890 | Msa0486570 | -0.810076 | 1.379372e-50 | -8.615850e-47 |
| Msa0417150 | Msa0486570 | 0.845301 | 4.423434e-59 | -8.615850e-47 |
| Msa0417630 | Msa0486570 | 0.866959 | 1.945978e-65 | -8.615850e-47 |
| Msa0420070 | Msa0486570 | 0.803897 | 2.800038e-49 | -8.615850e-47 |
| Msa0421800 | Msa0486570 | 0.879190 | 1.524844e-69 | -8.615850e-47 |
| Msa0423110 | Msa0486570 | 0.810457 | 1.141948e-50 | -8.615850e-47 |
| Msa0425050 | Msa0486570 | 0.802123 | 6.513483e-49 | -8.615850e-47 |
| Msa0426730 | Msa0486570 | 0.807267 | 5.493452e-50 | -8.615850e-47 |
| Msa0427050 | Msa0486570 | 0.821961 | 3.056745e-53 | -8.615850e-47 |
| Msa0427690 | Msa0486570 | 0.806920 | 6.506535e-50 | -8.615850e-47 |
| Msa0429270 | Msa0486570 | 0.802291 | 6.015768e-49 | -8.615850e-47 |
| Msa0432680 | Msa0486570 | 0.846451 | 2.154589e-59 | -8.615850e-47 |
| Msa0463540 | Msa0486570 | 0.810821 | 9.527269e-51 | -8.615850e-47 |
| Msa0465510 | Msa0486570 | 0.857322 | 1.765845e-62 | -8.615850e-47 |
| Msa0467800 | Msa0486570 | 0.884079 | 2.605122e-71 | -8.615850e-47 |
| Msa0467880 | Msa0486570 | 0.880925 | 3.672663e-70 | -8.615850e-47 |
| Msa0469910 | Msa0486570 | -0.803947 | 2.733764e-49 | -8.615850e-47 |
| Msa0480150 | Msa0486570 | 0.811931 | 5.467949e-51 | -8.615850e-47 |
| Msa0482680 | Msa0486570 | 0.808504 | 2.998133e-50 | -8.615850e-47 |
| Msa0248560 | Msa0486570 | 0.826700 | 2.348694e-54 | -8.615850e-47 |
| Msa0252180 | Msa0486570 | 0.841611 | 4.279298e-58 | -8.615850e-47 |
| Msa0255990 | Msa0486570 | 0.808487 | 3.023429e-50 | -8.615850e-47 |
| Msa0257130 | Msa0486570 | 0.829656 | 4.556331e-55 | -8.615850e-47 |
| Msa0257310 | Msa0486570 | 0.815634 | 8.359790e-52 | -8.615850e-47 |
| Msa0263430 | Msa0486570 | 0.802248 | 6.139853e-49 | -8.615850e-47 |
| Msa0263620 | Msa0486570 | 0.817054 | 4.023824e-52 | -8.615850e-47 |
| Msa0274780 | Msa0486570 | 0.813205 | 2.879385e-51 | -8.615850e-47 |
| Msa0278620 | Msa0486570 | 0.810511 | 1.111772e-50 | -8.615850e-47 |
| Msa0280140 | Msa0486570 | 0.824937 | 6.157892e-54 | -8.615850e-47 |
| Msa0284780 | Msa0486570 | 0.808590 | 2.873815e-50 | -8.615850e-47 |
| Msa0284870 | Msa0486570 | 0.821749 | 3.422185e-53 | -8.615850e-47 |
| Msa0286400 | Msa0486570 | -0.800385 | 1.477555e-48 | -8.615850e-47 |
| Msa0288240 | Msa0486570 | 0.812707 | 3.701715e-51 | -8.615850e-47 |
| Msa0291040 | Msa0486570 | 0.812301 | 4.540813e-51 | -8.615850e-47 |
| Msa0292070 | Msa0486570 | 0.826344 | 2.855815e-54 | -8.615850e-47 |
| Msa0296000 | Msa0486570 | 0.817004 | 4.128712e-52 | -8.615850e-47 |
| Msa0296760 | Msa0486570 | 0.812896 | 3.365709e-51 | -8.615850e-47 |
| Msa0298970 | Msa0486570 | 0.801010 | 1.101790e-48 | -8.615850e-47 |
| Msa0301020 | Msa0486570 | 0.806594 | 7.625639e-50 | -8.615850e-47 |
| Msa0306130 | Msa0486570 | 0.823907 | 1.075740e-53 | -8.615850e-47 |
| Msa0318000 | Msa0486570 | 0.820553 | 6.455479e-53 | -8.615850e-47 |
| Msa0328210 | Msa0486570 | 0.868909 | 4.597940e-66 | -8.615850e-47 |
| Msa0333900 | Msa0486570 | 0.812930 | 3.309447e-51 | -8.615850e-47 |
| Msa0334020 | Msa0486570 | 0.819356 | 1.212578e-52 | -8.615850e-47 |
| Msa0336270 | Msa0486570 | 0.804372 | 2.229317e-49 | -8.615850e-47 |
| Msa0349000 | Msa0486570 | 0.812491 | 4.128832e-51 | -8.615850e-47 |
| Msa0363940 | Msa0486570 | 0.884770 | 1.443829e-71 | -8.615850e-47 |
| Msa0482960 | Msa0486570 | 0.801198 | 1.008016e-48 | -8.615850e-47 |
| Msa0485280 | Msa0486570 | 0.850276 | 1.885702e-60 | -8.615850e-47 |
| Msa0486570 | Msa0509540 | 0.821302 | 4.340231e-53 | -8.615850e-47 |
| Msa0486570 | Msa0514260 | 0.872907 | 2.216672e-67 | -8.615850e-47 |
| Msa0486570 | Msa0514990 | 0.803136 | 4.026719e-49 | -8.615850e-47 |
| Msa0486570 | Msa0518520 | 0.807884 | 4.064673e-50 | -8.615850e-47 |
| Msa0486570 | Msa0519200 | 0.831754 | 1.395127e-55 | -8.615850e-47 |
| Msa0486570 | Msa0524090 | 0.856144 | 3.924758e-62 | -8.615850e-47 |
| Msa0486570 | Msa0524120 | 0.857892 | 1.197661e-62 | -8.615850e-47 |
| Msa0486570 | Msa0524200 | -0.817153 | 3.821723e-52 | -8.615850e-47 |
| Msa0486570 | Msa0534420 | 0.810574 | 1.077134e-50 | -8.615850e-47 |
| Msa0486570 | Msa0535450 | 0.832146 | 1.116544e-55 | -8.615850e-47 |
| Msa0486570 | Msa0538260 | 0.804312 | 2.294474e-49 | -8.615850e-47 |
| Msa0486570 | Msa0538570 | 0.827316 | 1.673118e-54 | -8.615850e-47 |
| Msa0486570 | Msa0540320 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
| Msa0486570 | Msa0542040 | 0.802236 | 6.173170e-49 | -8.615850e-47 |
| Msa0486570 | Msa0546380 | 0.843985 | 1.000332e-58 | -8.615850e-47 |
| Msa0486570 | Msa0546740 | 0.861579 | 9.289648e-64 | -8.615850e-47 |
| Msa0486570 | Msa0547050 | 0.841830 | 3.745230e-58 | -8.615850e-47 |
| Msa0486570 | Msa0550110 | 0.806102 | 9.684028e-50 | -8.615850e-47 |
| Msa0486570 | Msa0560180 | 0.809741 | 1.628488e-50 | -8.615850e-47 |
| Msa0486570 | Msa0560200 | 0.806066 | 9.854185e-50 | -8.615850e-47 |
| Msa0486570 | Msa0561510 | 0.808044 | 3.757233e-50 | -8.615850e-47 |
| Msa0486570 | Msa0562300 | -0.810292 | 1.239521e-50 | -8.615850e-47 |
| Msa0486570 | Msa0576420 | 0.815331 | 9.765445e-52 | -8.615850e-47 |
| Msa0486570 | Msa0576600 | 0.804023 | 2.635067e-49 | -8.615850e-47 |
| Msa0486570 | Msa0576980 | 0.804811 | 1.806066e-49 | -8.615850e-47 |
| Msa0486570 | Msa0582110 | 0.807146 | 5.829669e-50 | -8.615850e-47 |
| Msa0486570 | Msa0591160 | -0.801685 | 8.014285e-49 | -8.615850e-47 |
| Msa0486570 | Msa0591830 | -0.824089 | 9.748630e-54 | -8.615850e-47 |
| Msa0486570 | Msa0594180 | 0.808278 | 3.349696e-50 | -8.615850e-47 |
| Msa0486570 | Msa0594390 | 0.814638 | 1.391080e-51 | -8.615850e-47 |
| Msa0486570 | Msa0596100 | 0.802993 | 4.309055e-49 | -8.615850e-47 |
| Msa0486570 | Msa0598250 | 0.816792 | 4.607728e-52 | -8.615850e-47 |
| Msa0486570 | Msa0600390 | 0.820551 | 6.462963e-53 | -8.615850e-47 |
| Msa0486570 | Msa0601780 | 0.804870 | 1.754840e-49 | -8.615850e-47 |
| Msa0486570 | Msa0605620 | 0.826571 | 2.522448e-54 | -8.615850e-47 |
| Msa0486570 | Msa0606060 | 0.845627 | 3.609783e-59 | -8.615850e-47 |
| Msa0486570 | Msa0614230 | 0.840752 | 7.197006e-58 | -8.615850e-47 |
| Msa0486570 | Msa0617830 | 0.813985 | 1.939228e-51 | -8.615850e-47 |
| Msa0486570 | Msa0619330 | 0.838604 | 2.604797e-57 | -8.615850e-47 |
| Msa0486570 | Msa0622340 | 0.819506 | 1.120677e-52 | -8.615850e-47 |
| Msa0486570 | Msa0622390 | 0.803614 | 3.204564e-49 | -8.615850e-47 |
| Msa0486570 | Msa0624730 | 0.803460 | 3.448777e-49 | -8.615850e-47 |
| Msa0486570 | Msa0631840 | 0.846461 | 2.140603e-59 | -8.615850e-47 |
| Msa0486570 | Msa0638690 | 0.838094 | 3.526157e-57 | -8.615850e-47 |
| Msa0486570 | Msa0638710 | 0.809257 | 2.069466e-50 | -8.615850e-47 |
| Msa0486570 | Msa0640880 | 0.826446 | 2.700296e-54 | -8.615850e-47 |
| Msa0486570 | Msa0642650 | 0.843398 | 1.436320e-58 | -8.615850e-47 |
| Msa0486570 | Msa0642910 | 0.822681 | 2.079788e-53 | -8.615850e-47 |
| Msa0486570 | Msa0647000 | 0.819399 | 1.185699e-52 | -8.615850e-47 |
| Msa0486570 | Msa0654060 | 0.814051 | 1.875696e-51 | -8.615850e-47 |
| Msa0486570 | Msa0655660 | -0.811041 | 8.535782e-51 | -8.615850e-47 |
| Msa0486570 | Msa0656680 | 0.806909 | 6.541354e-50 | -8.615850e-47 |
| Msa0486570 | Msa0659040 | 0.807628 | 4.606248e-50 | -8.615850e-47 |
| Msa0486570 | Msa0659070 | 0.835554 | 1.568435e-56 | -8.615850e-47 |
| Msa0486570 | Msa0660820 | 0.814134 | 1.798433e-51 | -8.615850e-47 |
| Msa0486570 | Msa0662850 | 0.809638 | 1.714249e-50 | -8.615850e-47 |
| Msa0486570 | Msa0667220 | 0.853243 | 2.718216e-61 | -8.615850e-47 |
| Msa0486570 | Msa0667970 | 0.803557 | 3.293665e-49 | -8.615850e-47 |
| Msa0486570 | Msa0669200 | 0.826443 | 2.704717e-54 | -8.615850e-47 |
| Msa0486570 | Msa0669220 | 0.804767 | 1.844736e-49 | -8.615850e-47 |
| Msa0486570 | Msa0669850 | 0.805251 | 1.461243e-49 | -8.615850e-47 |
| Msa0486570 | Msa0674220 | 0.808529 | 2.962296e-50 | -8.615850e-47 |
| Msa0486570 | Msa0681890 | 0.864859 | 8.978815e-65 | -8.615850e-47 |
| Msa0486570 | Msa0686610 | 0.857899 | 1.191760e-62 | -8.615850e-47 |
| Msa0486570 | Msa0693570 | 0.816816 | 4.550309e-52 | -8.615850e-47 |
| Msa0486570 | Msa0697400 | 0.822810 | 1.941411e-53 | -8.615850e-47 |
| Msa0486570 | Msa0702070 | 0.804896 | 1.733671e-49 | -8.615850e-47 |
| Msa0486570 | Msa0703720 | 0.862416 | 5.148312e-64 | -8.615850e-47 |
| Msa0486570 | Msa0703760 | 0.840813 | 6.935184e-58 | -8.615850e-47 |
| Msa0486570 | Msa0704570 | 0.810678 | 1.022721e-50 | -8.615850e-47 |
| Msa0486570 | Msa0704990 | 0.816617 | 5.041327e-52 | -8.615850e-47 |
| Msa0486570 | Msa0705030 | 0.804602 | 1.996993e-49 | -8.615850e-47 |
| Msa0486570 | Msa0707780 | 0.806239 | 9.060196e-50 | -8.615850e-47 |
| Msa0486570 | Msa0709480 | 0.839596 | 1.441971e-57 | -8.615850e-47 |
| Msa0486570 | Msa0717510 | 0.810126 | 1.345732e-50 | -8.615850e-47 |
| Msa0486570 | Msa0719340 | 0.800131 | 1.663994e-48 | -8.615850e-47 |
| Msa0486570 | Msa0724050 | 0.845115 | 4.967751e-59 | -8.615850e-47 |
| Msa0486570 | Msa0726610 | 0.816423 | 5.574101e-52 | -8.615850e-47 |
| Msa0486570 | Msa0730180 | 0.815490 | 9.001979e-52 | -8.615850e-47 |
| Msa0486570 | Msa0738860 | 0.815327 | 9.784846e-52 | -8.615850e-47 |
| Msa0486570 | Msa0738870 | 0.854273 | 1.374165e-61 | -8.615850e-47 |
| Msa0486570 | Msa0738880 | 0.818522 | 1.876227e-52 | -8.615850e-47 |
| Msa0486570 | Msa0739570 | 0.825110 | 5.605507e-54 | -8.615850e-47 |
| Msa0486570 | Msa0740420 | 0.803091 | 4.113595e-49 | -8.615850e-47 |
| Msa0486570 | Msa0763880 | 0.847023 | 1.503372e-59 | -8.615850e-47 |
| Msa0486570 | Msa0763910 | 0.842618 | 2.316166e-58 | -8.615850e-47 |
| Msa0486570 | Msa0770430 | 0.812066 | 5.111592e-51 | -8.615850e-47 |
| Msa0486570 | Msa0772150 | 0.807257 | 5.520941e-50 | -8.615850e-47 |
| Msa0486570 | Msa0772210 | 0.815080 | 1.110119e-51 | -8.615850e-47 |
| Msa0486570 | Msa0775260 | 0.820126 | 8.088398e-53 | -8.615850e-47 |
| Msa0486570 | Msa0781490 | -0.815191 | 1.049019e-51 | -8.615850e-47 |
| Msa0486570 | Msa0782330 | 0.832895 | 7.282292e-56 | -8.615850e-47 |
| Msa0486570 | Msa0783270 | 0.812441 | 4.232755e-51 | -8.615850e-47 |
| Msa0486570 | Msa0787720 | 0.802371 | 5.790637e-49 | -8.615850e-47 |
| Msa0486570 | Msa0790830 | 0.805877 | 1.079462e-49 | -8.615850e-47 |
| Msa0486570 | Msa0796450 | 0.803352 | 3.631690e-49 | -8.615850e-47 |
| Msa0486570 | Msa0803130 | 0.816383 | 5.687794e-52 | -8.615850e-47 |
| Msa0486570 | Msa0811510 | 0.813975 | 1.949571e-51 | -8.615850e-47 |
| Msa0486570 | Msa0812660 | 0.826189 | 3.110170e-54 | -8.615850e-47 |
| Msa0486570 | Msa0819320 | 0.810776 | 9.742358e-51 | -8.615850e-47 |
| Msa0486570 | Msa0819330 | 0.821475 | 3.959081e-53 | -8.615850e-47 |
| Msa0486570 | Msa0819360 | 0.820905 | 5.357892e-53 | -8.615850e-47 |
| Msa0486570 | Msa0819370 | 0.817807 | 2.722667e-52 | -8.615850e-47 |
| Msa0486570 | Msa0820670 | 0.809542 | 1.797368e-50 | -8.615850e-47 |
| Msa0486570 | Msa0824770 | 0.805551 | 1.264142e-49 | -8.615850e-47 |
| Msa0486570 | Msa0838660 | 0.811398 | 7.141423e-51 | -8.615850e-47 |
| Msa0486570 | Msa0841490 | 0.812188 | 4.808420e-51 | -8.615850e-47 |
| Msa0486570 | Msa0844100 | 0.819381 | 1.196496e-52 | -8.615850e-47 |
| Msa0486570 | Msa0850630 | -0.821267 | 4.422281e-53 | -8.615850e-47 |
| Msa0486570 | Msa0851740 | 0.822457 | 2.344317e-53 | -8.615850e-47 |
| Msa0486570 | Msa0852730 | 0.813122 | 3.003310e-51 | -8.615850e-47 |
| Msa0486570 | Msa0853170 | 0.803968 | 2.705893e-49 | -8.615850e-47 |
| Msa0486570 | Msa0859520 | 0.819410 | 1.178433e-52 | -8.615850e-47 |
| Msa0486570 | Msa0860270 | 0.817944 | 2.535588e-52 | -8.615850e-47 |
| Msa0486570 | Msa0872660 | 0.820038 | 8.472695e-53 | -8.615850e-47 |
| Msa0486570 | Msa0875360 | 0.813187 | 2.905616e-51 | -8.615850e-47 |
| Msa0486570 | Msa0877420 | 0.841238 | 5.365136e-58 | -8.615850e-47 |
| Msa0486570 | Msa0890250 | 0.806645 | 7.440395e-50 | -8.615850e-47 |
| Msa0486570 | Msa0906720 | 0.819047 | 1.425552e-52 | -8.615850e-47 |
| Msa0486570 | Msa0907700 | 0.835471 | 1.645848e-56 | -8.615850e-47 |
| Msa0486570 | Msa0922540 | 0.860699 | 1.721586e-63 | -8.615850e-47 |
| Msa0486570 | Msa0925160 | 0.853614 | 2.126764e-61 | -8.615850e-47 |
| Msa0486570 | Msa0926860 | 0.806024 | 1.005723e-49 | -8.615850e-47 |
| Msa0486570 | Msa0930330 | 0.808256 | 3.386021e-50 | -8.615850e-47 |
| Msa0486570 | Msa0931480 | 0.822238 | 2.635769e-53 | -8.615850e-47 |
| Msa0486570 | Msa0934830 | 0.819197 | 1.317647e-52 | -8.615850e-47 |
| Msa0486570 | Msa0938970 | 0.802416 | 5.669509e-49 | -8.615850e-47 |
| Msa0486570 | Msa0942730 | 0.822024 | 2.955743e-53 | -8.615850e-47 |
| Msa0486570 | Msa0950900 | 0.817743 | 2.814172e-52 | -8.615850e-47 |
| Msa0486570 | Msa0955260 | 0.849080 | 4.067186e-60 | -8.615850e-47 |
| Msa0486570 | Msa0955310 | 0.844448 | 7.512150e-59 | -8.615850e-47 |
| Msa0486570 | Msa0958020 | 0.869408 | 3.166765e-66 | -8.615850e-47 |
| Msa0486570 | Msa0971860 | 0.834522 | 2.854326e-56 | -8.615850e-47 |
| Msa0486570 | Msa0975910 | 0.805883 | 1.076688e-49 | -8.615850e-47 |
| Msa0486570 | Msa0979550 | 0.817016 | 4.103609e-52 | -8.615850e-47 |
| Msa0486570 | Msa0990520 | 0.850825 | 1.321548e-60 | -8.615850e-47 |
| Msa0486570 | Msa0992570 | 0.866166 | 3.478924e-65 | -8.615850e-47 |
| Msa0486570 | Msa0992590 | 0.860924 | 1.470630e-63 | -8.615850e-47 |
| Msa0486570 | Msa0996090 | 0.865127 | 7.395564e-65 | -8.615850e-47 |
| Msa0486570 | Msa1002040 | 0.861579 | 9.289976e-64 | -8.615850e-47 |
| Msa0486570 | Msa1010140 | 0.818085 | 2.355995e-52 | -8.615850e-47 |
| Msa0486570 | Msa1015060 | 0.842118 | 3.142632e-58 | -8.615850e-47 |
| Msa0486570 | Msa1022310 | 0.805213 | 1.488232e-49 | -8.615850e-47 |
| Msa0486570 | Msa1024580 | 0.807648 | 4.561190e-50 | -8.615850e-47 |
| Msa0486570 | Msa1027150 | 0.800566 | 1.357211e-48 | -8.615850e-47 |
| Msa0486570 | Msa1027790 | 0.819791 | 9.645782e-53 | -8.615850e-47 |
| Msa0486570 | Msa1028460 | 0.805125 | 1.552035e-49 | -8.615850e-47 |
| Msa0486570 | Msa1029320 | 0.826971 | 2.023350e-54 | -8.615850e-47 |
| Msa0486570 | Msa1030280 | 0.809177 | 2.152121e-50 | -8.615850e-47 |
| Msa0486570 | Msa1030870 | 0.800619 | 1.323745e-48 | -8.615850e-47 |
| Msa0486570 | Msa1038320 | 0.812047 | 5.160295e-51 | -8.615850e-47 |
| Msa0486570 | Msa1040770 | 0.815519 | 8.868070e-52 | -8.615850e-47 |
| Msa0486570 | Msa1044040 | 0.808508 | 2.992720e-50 | -8.615850e-47 |
| Msa0486570 | Msa1056640 | 0.828667 | 7.913796e-55 | -8.615850e-47 |
| Msa0486570 | Msa1061180 | 0.807400 | 5.149465e-50 | -8.615850e-47 |
| Msa0486570 | Msa1084490 | 0.821836 | 3.266840e-53 | -8.615850e-47 |
| Msa0486570 | Msa1089530 | 0.823980 | 1.034099e-53 | -8.615850e-47 |
| Msa0486570 | Msa1092820 | 0.838893 | 2.194044e-57 | -8.615850e-47 |
| Msa0486570 | Msa1097380 | 0.808408 | 3.142860e-50 | -8.615850e-47 |
| Msa0486570 | Msa1106560 | 0.810260 | 1.258966e-50 | -8.615850e-47 |
| Msa0486570 | Msa1112610 | 0.826719 | 2.324949e-54 | -8.615850e-47 |
| Msa0486570 | Msa1116140 | 0.807425 | 5.087643e-50 | -8.615850e-47 |
| Msa0486570 | Msa1119720 | 0.820409 | 6.963974e-53 | -8.615850e-47 |
| Msa0486570 | Msa1125780 | 0.835942 | 1.250859e-56 | -8.615850e-47 |
| Msa0486570 | Msa1125950 | 0.840682 | 7.503961e-58 | -8.615850e-47 |
| Msa0486570 | Msa1149760 | 0.816570 | 5.165224e-52 | -8.615850e-47 |
| Msa0486570 | Msa1154670 | 0.826401 | 2.768263e-54 | -8.615850e-47 |
| Msa0486570 | Msa1157730 | 0.800407 | 1.462380e-48 | -8.615850e-47 |
| Msa0486570 | Msa1159100 | 0.813459 | 2.532587e-51 | -8.615850e-47 |
| Msa0486570 | Msa1166180 | 0.852751 | 3.759506e-61 | -8.615850e-47 |
| Msa0486570 | Msa1166280 | 0.842900 | 1.948907e-58 | -8.615850e-47 |
| Msa0486570 | Msa1171340 | 0.848389 | 6.323073e-60 | -8.615850e-47 |
| Msa0486570 | Msa1181380 | 0.815053 | 1.126022e-51 | -8.615850e-47 |
| Msa0486570 | Msa1190910 | 0.820494 | 6.657338e-53 | -8.615850e-47 |
| Msa0486570 | Msa1197110 | 0.827048 | 1.940240e-54 | -8.615850e-47 |
| Msa0486570 | Msa1198450 | 0.820355 | 7.166996e-53 | -8.615850e-47 |
| Msa0486570 | Msa1200920 | 0.835419 | 1.696703e-56 | -8.615850e-47 |
| Msa0486570 | Msa1210770 | 0.809211 | 2.116464e-50 | -8.615850e-47 |
| Msa0486570 | Msa1215210 | 0.824835 | 6.508809e-54 | -8.615850e-47 |
| Msa0486570 | Msa1218650 | 0.824798 | 6.639191e-54 | -8.615850e-47 |
| Msa0486570 | Msa1219250 | 0.859422 | 4.181085e-63 | -8.615850e-47 |
| Msa0486570 | Msa1220450 | -0.849249 | 3.649587e-60 | -8.615850e-47 |
| Msa0486570 | Msa1220460 | -0.836890 | 7.176319e-57 | -8.615850e-47 |
| Msa0486570 | Msa1220480 | -0.833913 | 4.058218e-56 | -8.615850e-47 |
| Msa0486570 | Msa1220740 | 0.844721 | 6.345339e-59 | -8.615850e-47 |
| Msa0486570 | Msa1223160 | -0.800068 | 1.714434e-48 | -8.615850e-47 |
| Msa0486570 | Msa1223840 | 0.860627 | 1.810309e-63 | -8.615850e-47 |
| Msa0486570 | Msa1224670 | 0.823423 | 1.396587e-53 | -8.615850e-47 |
| Msa0486570 | Msa1237030 | 0.820831 | 5.571177e-53 | -8.615850e-47 |
| Msa0486570 | Msa1246530 | -0.825747 | 3.961019e-54 | -8.615850e-47 |
| Msa0486570 | Msa1250670 | 0.850267 | 1.896063e-60 | -8.615850e-47 |
| Msa0486570 | Msa1254190 | 0.801640 | 8.185339e-49 | -8.615850e-47 |
| Msa0486570 | Msa1263030 | 0.827135 | 1.849506e-54 | -8.615850e-47 |
| Msa0486570 | Msa1271600 | 0.821151 | 4.702820e-53 | -8.615850e-47 |
| Msa0486570 | Msa1288190 | 0.805381 | 1.372260e-49 | -8.615850e-47 |
| Msa0486570 | Msa1309100 | 0.835088 | 2.056925e-56 | -8.615850e-47 |
| Msa0486570 | Msa1315980 | 0.800257 | 1.568690e-48 | -8.615850e-47 |
| Msa0486570 | Msa1323060 | 0.823385 | 1.425224e-53 | -8.615850e-47 |
| Msa0486570 | Msa1334650 | 0.834666 | 2.626398e-56 | -8.615850e-47 |
| Msa0486570 | Msa1337090 | 0.811222 | 7.799759e-51 | -8.615850e-47 |
| Msa0486570 | Msa1337730 | 0.805870 | 1.083417e-49 | -8.615850e-47 |
| Msa0486570 | Msa1341930 | 0.828296 | 9.729738e-55 | -8.615850e-47 |
| Msa0486570 | Msa1350670 | 0.809619 | 1.729849e-50 | -8.615850e-47 |
| Msa0486570 | Msa1352290 | 0.817252 | 3.632070e-52 | -8.615850e-47 |
| Msa0486570 | Msa1354040 | 0.800410 | 1.459934e-48 | -8.615850e-47 |
| Msa0486570 | Msa1361910 | 0.812757 | 3.611233e-51 | -8.615850e-47 |
| Msa0486570 | Msa1365210 | 0.829891 | 3.994871e-55 | -8.615850e-47 |
| Msa0486570 | Msa1367390 | -0.813041 | 3.128750e-51 | -8.615850e-47 |
| Msa0486570 | Msa1367940 | 0.839621 | 1.420553e-57 | -8.615850e-47 |
| Msa0486570 | Msa1373510 | 0.833657 | 4.701490e-56 | -8.615850e-47 |
| Msa0486570 | Msa1375630 | 0.810233 | 1.276499e-50 | -8.615850e-47 |
| Msa0486570 | Msa1376530 | 0.833365 | 5.561170e-56 | -8.615850e-47 |
| Msa0486570 | Msa1376640 | 0.825356 | 4.901350e-54 | -8.615850e-47 |
| Msa0486570 | Msa1379980 | 0.802907 | 4.489804e-49 | -8.615850e-47 |
| Msa0486570 | Msa1381130 | 0.859452 | 4.094988e-63 | -8.615850e-47 |
| Msa0486570 | Msa1382720 | 0.819986 | 8.706839e-53 | -8.615850e-47 |
| Msa0486570 | Msa1385620 | 0.805461 | 1.320013e-49 | -8.615850e-47 |
| Msa0486570 | Msa1388850 | 0.817512 | 3.172690e-52 | -8.615850e-47 |
| Msa0486570 | Msa1405770 | 0.868377 | 6.834407e-66 | -8.615850e-47 |
| Msa0486570 | Msa1406230 | 0.801594 | 8.365748e-49 | -8.615850e-47 |
| Msa0486570 | Msa1410170 | 0.823873 | 1.095876e-53 | -8.615850e-47 |
| Msa0486570 | Msa1412080 | 0.841162 | 5.617295e-58 | -8.615850e-47 |
| Msa0486570 | Msa1414180 | -0.816191 | 6.279931e-52 | -8.615850e-47 |
| Msa0486570 | Msa1418200 | 0.810035 | 1.408103e-50 | -8.615850e-47 |
| Msa0486570 | Msa1419110 | 0.812857 | 3.432328e-51 | -8.615850e-47 |
| Msa0486570 | Msa1422750 | 0.809813 | 1.571396e-50 | -8.615850e-47 |
| Msa0486570 | Msa1432640 | 0.819623 | 1.053970e-52 | -8.615850e-47 |
| Msa0486570 | Msa1435470 | 0.828119 | 1.072970e-54 | -8.615850e-47 |
| Msa0486570 | Msa1439230 | 0.824352 | 8.454738e-54 | -8.615850e-47 |
| Msa0486570 | Msa1439800 | 0.810497 | 1.119420e-50 | -8.615850e-47 |
| Msa0486570 | Msa1440180 | 0.816190 | 6.284003e-52 | -8.615850e-47 |
| Msa0486570 | Msa1442030 | 0.807957 | 3.921816e-50 | -8.615850e-47 |
| Msa0486570 | Msa1444450 | 0.830632 | 2.632630e-55 | -8.615850e-47 |
| Msa0486570 | Msa1449740 | 0.815899 | 7.297997e-52 | -8.615850e-47 |
| Msa0486570 | Msa1449880 | 0.817685 | 2.901083e-52 | -8.615850e-47 |
| Msa0486570 | Msa1456650 | 0.853116 | 2.955870e-61 | -8.615850e-47 |
| Msa0486570 | Msa1456810 | 0.814056 | 1.870715e-51 | -8.615850e-47 |
| Msa0486570 | Msa1458330 | 0.812911 | 3.339829e-51 | -8.615850e-47 |
| Msa0486570 | Msa1458920 | 0.839262 | 1.760503e-57 | -8.615850e-47 |
| Msa0486570 | Msa1464560 | 0.817740 | 2.819698e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486570 | MtrunA17_Chr3g0102791 | 89.143 | 175 | 6 | 2 | 1 | 174 | 1 | 163 | 2.56e-83 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486570 | AT1G56200.1 | 61.719 | 128 | 42 | 3 | 48 | 173 | 32 | 154 | 5.62e-21 | 84.3 |
| Msa0486570 | AT1G56200.2 | 61.719 | 128 | 42 | 3 | 48 | 173 | 29 | 151 | 6.33e-21 | 84.3 |
| Msa0486570 | AT1G30475.3 | 68.182 | 88 | 26 | 1 | 79 | 164 | 73 | 160 | 3.65e-18 | 77.4 |
| Msa0486570 | AT1G30475.2 | 68.182 | 88 | 26 | 1 | 79 | 164 | 73 | 160 | 3.65e-18 | 77.4 |
| Msa0486570 | AT1G30475.1 | 68.182 | 88 | 26 | 1 | 79 | 164 | 102 | 189 | 4.26e-18 | 77.8 |
Find 77 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGATATGGTTGCGAAAT+TGG | 0.106467 | 3_4:+4616960 | None:intergenic |
| TCATTTACCTGGTGGTAATT+TGG | 0.111148 | 3_4:+4614727 | None:intergenic |
| GGTCGAATTATGGATGAATT+TGG | 0.218500 | 3_4:+4616982 | None:intergenic |
| TGCAAGGTCTCTGAAATTTC+GGG | 0.224213 | 3_4:-4617084 | Msa0486570:five_prime_UTR |
| TTGCAAGGTCTCTGAAATTT+CGG | 0.241226 | 3_4:-4617085 | Msa0486570:five_prime_UTR |
| CATTTACCTGGTGGTAATTT+GGG | 0.261244 | 3_4:+4614728 | None:intergenic |
| TGCGAAATTGGGTCGAATTA+TGG | 0.278971 | 3_4:+4616972 | None:intergenic |
| AAGACGAAGGTTACGGTTAC+AGG | 0.291277 | 3_4:-4612772 | Msa0486570:CDS |
| TCCTCTTCCAAACCATTGTT+AGG | 0.313054 | 3_4:-4617030 | Msa0486570:five_prime_UTR |
| ATTTCAGAGACCTTGCAAAT+TGG | 0.334767 | 3_4:+4617090 | None:intergenic |
| GGAGGTGGAGGCAACTGGTC+TGG | 0.349107 | 3_4:-4612854 | Msa0486570:CDS |
| TATAATATGTGCTGCAGCTT+TGG | 0.349585 | 3_4:-4613745 | Msa0486570:intron |
| TTGAAACCCTAACAATGGTT+TGG | 0.393778 | 3_4:+4617023 | None:intergenic |
| CCAACAATTACCCATCTTCC+AGG | 0.394142 | 3_4:-4613081 | Msa0486570:intron |
| TATGATATGGTTGCGAAATT+GGG | 0.410832 | 3_4:+4616961 | None:intergenic |
| CCTGGAAGATGGGTAATTGT+TGG | 0.418823 | 3_4:+4613081 | None:intergenic |
| GGATAGCTTCAGAAGCAGTT+TGG | 0.418939 | 3_4:+4617060 | None:intergenic |
| TAACCGGAGAAGGCGGTGAT+AGG | 0.419295 | 3_4:-4612747 | Msa0486570:exon |
| GAGGTGGAGGTGGAGGCAAC+TGG | 0.422662 | 3_4:-4612859 | Msa0486570:CDS |
| CATAGTACTGTAGAATATAT+TGG | 0.427784 | 3_4:-4612665 | Msa0486570:three_prime_UTR |
| TTGCCTATCACCGCCTTCTC+CGG | 0.444144 | 3_4:+4612744 | None:intergenic |
| TTAACAGTCCGTAGTCCTCT+TGG | 0.444264 | 3_4:+4613837 | None:intergenic |
| GTAGAATATATTGGTCTGAC+AGG | 0.451801 | 3_4:-4612656 | Msa0486570:three_prime_UTR |
| CCTCTTCCAAACCATTGTTA+GGG | 0.453171 | 3_4:-4617029 | Msa0486570:five_prime_UTR |
| TTCCACCATCATCAATTTGT+GGG | 0.456713 | 3_4:+4612921 | None:intergenic |
| TTAACAGTCCGTAGTCCTCT+TGG | 0.463947 | 3_4:+4613873 | None:intergenic |
| GTCAACAATTACCTGGAAGA+TGG | 0.464114 | 3_4:+4613070 | None:intergenic |
| GTACCACGCGGAATCGTTGA+TGG | 0.480630 | 3_4:+4616905 | None:intergenic |
| CAAATTGATGATGGTGGAAG+TGG | 0.481050 | 3_4:-4612917 | Msa0486570:CDS |
| GTTACGGTTACAGGGATAAC+CGG | 0.483400 | 3_4:-4612763 | Msa0486570:CDS |
| GAAAGTGAAGACGAAGGTTA+CGG | 0.496218 | 3_4:-4612779 | Msa0486570:CDS |
| GGTGGAGGCAACTGGTCTGG+TGG | 0.503674 | 3_4:-4612851 | Msa0486570:CDS |
| TTCTGCCTGCACACCAATGT+TGG | 0.512779 | 3_4:-4614774 | Msa0486570:exon |
| TATTCTACAGTACTATGATA+AGG | 0.514912 | 3_4:+4612671 | None:intergenic |
| ATGAGCCGAAAACTATGATA+TGG | 0.515263 | 3_4:+4616948 | None:intergenic |
| CCCTAACAATGGTTTGGAAG+AGG | 0.519784 | 3_4:+4617029 | None:intergenic |
| AGTAGCCAACATTGGTGTGC+AGG | 0.522326 | 3_4:+4614769 | None:intergenic |
| CTTCCACCATCATCAATTTG+TGG | 0.526409 | 3_4:+4612920 | None:intergenic |
| AGGGTTTCAAATTTCTCACT+CGG | 0.531778 | 3_4:-4617010 | Msa0486570:five_prime_UTR |
| CTCGTGATGATGATGATGGT+GGG | 0.535117 | 3_4:-4612886 | Msa0486570:CDS |
| TCAACAATTACCTGGAAGAT+GGG | 0.540469 | 3_4:+4613071 | None:intergenic |
| TTAAATTTCCAAGAGGACTA+CGG | 0.552642 | 3_4:-4613845 | Msa0486570:CDS |
| TTAAATTTCCAAGAGGACTA+CGG | 0.552642 | 3_4:-4613881 | Msa0486570:CDS |
| ACACAGTTTCCACATGGTAG+AGG | 0.560771 | 3_4:-4613792 | Msa0486570:CDS |
| CGTGATGATGATGATGGTGG+GGG | 0.561045 | 3_4:-4612884 | Msa0486570:CDS |
| ATCGTTGATGGATTACGATA+CGG | 0.566139 | 3_4:+4616917 | None:intergenic |
| TAGAGGAACTCGTTCTACTC+AGG | 0.576586 | 3_4:-4613775 | Msa0486570:CDS |
| GAAATTTGAAACCCTAACAA+TGG | 0.577367 | 3_4:+4617018 | None:intergenic |
| AAGTCCCCACAAATTGATGA+TGG | 0.581883 | 3_4:-4612926 | Msa0486570:CDS |
| CCTCGTGATGATGATGATGG+TGG | 0.603243 | 3_4:-4612887 | Msa0486570:CDS |
| AGATATGGTGCCAATTTGCA+AGG | 0.603964 | 3_4:-4617100 | None:intergenic |
| GGTTTGGAAGAGGAAGATGA+TGG | 0.604828 | 3_4:+4617039 | None:intergenic |
| TCCACCATCATCAATTTGTG+GGG | 0.604881 | 3_4:+4612922 | None:intergenic |
| TCCCCACAAATTGATGATGG+TGG | 0.613798 | 3_4:-4612923 | Msa0486570:CDS |
| AATACAGTTAAATTTCCAAG+AGG | 0.616988 | 3_4:-4613852 | Msa0486570:CDS |
| AGACGAAGGTTACGGTTACA+GGG | 0.621370 | 3_4:-4612771 | Msa0486570:CDS |
| TCTACAGTTAAATTTCCAAG+AGG | 0.623564 | 3_4:-4613888 | Msa0486570:CDS |
| CCGCCTCGTGATGATGATGA+TGG | 0.626202 | 3_4:-4612890 | Msa0486570:CDS |
| GCAAGGTCTCTGAAATTTCG+GGG | 0.627819 | 3_4:-4617083 | Msa0486570:five_prime_UTR |
| TCGTGATGATGATGATGGTG+GGG | 0.634260 | 3_4:-4612885 | Msa0486570:CDS |
| GGCCACTGTGTGGAAGAGAA+TGG | 0.636980 | 3_4:-4613915 | Msa0486570:CDS |
| TCTTTGCCCAAATTACCACC+AGG | 0.643884 | 3_4:-4614734 | Msa0486570:intron |
| GTGTGCACAGTGAGAAGAGG+TGG | 0.650924 | 3_4:-4613936 | Msa0486570:intron |
| TTTGTGTGCACAGTGAGAAG+AGG | 0.656598 | 3_4:-4613939 | Msa0486570:intron |
| AAACTCTCAAAATTTCGCTG+TGG | 0.664837 | 3_4:-4612572 | Msa0486570:three_prime_UTR |
| ACTGCACTAGTAGCCAACAT+TGG | 0.665642 | 3_4:+4614761 | None:intergenic |
| TAGAATATATTGGTCTGACA+GGG | 0.678545 | 3_4:-4612655 | Msa0486570:three_prime_UTR |
| CCACCATCATCATCATCACG+AGG | 0.679440 | 3_4:+4612887 | None:intergenic |
| ACAGGGATAACCGGAGAAGG+CGG | 0.687017 | 3_4:-4612754 | Msa0486570:CDS |
| GAGAAGAGGTGGCCACTGTG+TGG | 0.687254 | 3_4:-4613925 | Msa0486570:CDS |
| GTTACAGGGATAACCGGAGA+AGG | 0.698284 | 3_4:-4612757 | Msa0486570:CDS |
| GAACGAGTTCCTCTACCATG+TGG | 0.701280 | 3_4:+4613783 | None:intergenic |
| GACAAAGAAAGTGAAGACGA+AGG | 0.702140 | 3_4:-4612785 | Msa0486570:CDS |
| AGTTGTACACAGTTTCCACA+TGG | 0.705945 | 3_4:-4613798 | Msa0486570:CDS |
| CCATCATCATCATCACGAGG+CGG | 0.718376 | 3_4:+4612890 | None:intergenic |
| CACCATTCTCTTCCACACAG+TGG | 0.743076 | 3_4:+4613913 | None:intergenic |
| AATCCATCAACGATTCCGCG+TGG | 0.764571 | 3_4:-4616908 | Msa0486570:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAATTTAATAAATGATT+TGG | - | chr3_4:4613095-4613114 | Msa0486570:CDS | 10.0% |
| !!! | TCTTAATATAATTTTAGATT+AGG | - | chr3_4:4613704-4613723 | Msa0486570:intron | 10.0% |
| !!! | TTAATTTTTTAATGCACTTT+TGG | - | chr3_4:4613020-4613039 | Msa0486570:intron | 15.0% |
| !! | ATTATGATATTATCATATTC+TGG | - | chr3_4:4613652-4613671 | Msa0486570:intron | 15.0% |
| !!! | CAGTTTTTCTATTTTAAAAT+AGG | + | chr3_4:4614040-4614059 | None:intergenic | 15.0% |
| !! | TTATGATTACTGTATAAATT+GGG | - | chr3_4:4614436-4614455 | Msa0486570:intron | 15.0% |
| !!! | AATTGATAACAAATTCTAAA+AGG | + | chr3_4:4614723-4614742 | None:intergenic | 15.0% |
| !!! | ATTTTATCTTTTATCTTCTT+CGG | - | chr3_4:4614768-4614787 | Msa0486570:exon | 15.0% |
| !! | TAAATTGAGACATAATATTT+AGG | - | chr3_4:4614942-4614961 | Msa0486570:intron | 15.0% |
| !! | ATATACGGATATTAAAGAAA+TGG | + | chr3_4:4612752-4612771 | None:intergenic | 20.0% |
| !!! | TTTTTTGTAGTTTGTAGAAA+TGG | - | chr3_4:4612883-4612902 | Msa0486570:CDS | 20.0% |
| !!! | TTTTTGTAGTTTGTAGAAAT+GGG | - | chr3_4:4612884-4612903 | Msa0486570:CDS | 20.0% |
| !!! | GAAGTTTACATTTTTATTGA+AGG | - | chr3_4:4613048-4613067 | Msa0486570:intron | 20.0% |
| !!! | TTTTTATTGAAGGATTTTGT+TGG | - | chr3_4:4613058-4613077 | Msa0486570:intron | 20.0% |
| !!! | TTTTATTGAAGGATTTTGTT+GGG | - | chr3_4:4613059-4613078 | Msa0486570:intron | 20.0% |
| !! | ACATATAATAGAAATGTGAA+TGG | + | chr3_4:4613483-4613502 | None:intergenic | 20.0% |
| !! | AAACTAAAAGATTTGTGAAT+GGG | + | chr3_4:4613521-4613540 | None:intergenic | 20.0% |
| !! | AAAACTAAAAGATTTGTGAA+TGG | + | chr3_4:4613522-4613541 | None:intergenic | 20.0% |
| !!! | AAATCTTTTAGTTTTCTTTC+TGG | - | chr3_4:4613527-4613546 | Msa0486570:intron | 20.0% |
| !!! | AATCTTTTAGTTTTCTTTCT+GGG | - | chr3_4:4613528-4613547 | Msa0486570:intron | 20.0% |
| !! | TTGAATATTTATTGTGTTGA+TGG | - | chr3_4:4613627-4613646 | Msa0486570:intron | 20.0% |
| !! | ATATTAAGAAAAACTGTAGA+CGG | + | chr3_4:4613693-4613712 | None:intergenic | 20.0% |
| !!! | ATTTTAAAATAGGTCATGTT+TGG | + | chr3_4:4614030-4614049 | None:intergenic | 20.0% |
| !! | ATTGAAAGGATTACATATTA+CGG | + | chr3_4:4614093-4614112 | None:intergenic | 20.0% |
| !! | GTTATGATTACTGTATAAAT+TGG | - | chr3_4:4614435-4614454 | Msa0486570:intron | 20.0% |
| !! | TGCATTGAAAGTAAAATTTA+GGG | + | chr3_4:4614521-4614540 | None:intergenic | 20.0% |
| !! | TTGCATTGAAAGTAAAATTT+AGG | + | chr3_4:4614522-4614541 | None:intergenic | 20.0% |
| !!! | TCTTTTTACATCTTCTTTAT+TGG | - | chr3_4:4614609-4614628 | Msa0486570:intron | 20.0% |
| !! | AGATAAAATATCTAGTATGT+TGG | + | chr3_4:4614757-4614776 | None:intergenic | 20.0% |
| !!! | TATCTATAACGATTTTTTCA+AGG | + | chr3_4:4615051-4615070 | None:intergenic | 20.0% |
| !! | ATAACTTGAAATTTCACATA+TGG | - | chr3_4:4616141-4616160 | Msa0486570:intron | 20.0% |
| !! | TAGAAAAACATTAAACATTC+AGG | - | chr3_4:4616338-4616357 | Msa0486570:intron | 20.0% |
| !! | TTAGTAATACATGAAATGAA+GGG | + | chr3_4:4616609-4616628 | None:intergenic | 20.0% |
| !! | ATTAGTAATACATGAAATGA+AGG | + | chr3_4:4616610-4616629 | None:intergenic | 20.0% |
| !! | GGAAGAAAAAAGTTTATATA+CGG | - | chr3_4:4617066-4617085 | Msa0486570:five_prime_UTR | 20.0% |
| !!! | CAATCATTGAAGTTTTATGA+TGG | - | chr3_4:4612835-4612854 | Msa0486570:CDS | 25.0% |
| ! | TGTTATGTATGTTGAAAGTT+TGG | - | chr3_4:4612859-4612878 | Msa0486570:CDS | 25.0% |
| !! | TTTGCATAGGATTTTCATAT+GGG | - | chr3_4:4612915-4612934 | Msa0486570:CDS | 25.0% |
| ! | TAATTCTAATCACATTCGTT+TGG | + | chr3_4:4612959-4612978 | None:intergenic | 25.0% |
| ! | ATTATGCACAGACTAATTAA+AGG | + | chr3_4:4613384-4613403 | None:intergenic | 25.0% |
| ! | AACTAAAAGATTTGTGAATG+GGG | + | chr3_4:4613520-4613539 | None:intergenic | 25.0% |
| ! | TTTAGTAAACATGACTATTG+TGG | - | chr3_4:4613579-4613598 | Msa0486570:intron | 25.0% |
| ! | TGATATTATCATATTCTGGT+TGG | - | chr3_4:4613656-4613675 | Msa0486570:intron | 25.0% |
| !! | GGGAAAAGAATAGAATTTTA+GGG | - | chr3_4:4613886-4613905 | Msa0486570:CDS | 25.0% |
| ! | TTACATATTACGGTGAATAT+AGG | + | chr3_4:4614083-4614102 | None:intergenic | 25.0% |
| ! | AGCATATCAAACATATTGAA+AGG | + | chr3_4:4614107-4614126 | None:intergenic | 25.0% |
| !!! | TATTTCACATAGTGGATTTT+CGG | - | chr3_4:4614217-4614236 | Msa0486570:intron | 25.0% |
| ! | GGATTTATTGGTAAACATTT+CGG | - | chr3_4:4614413-4614432 | Msa0486570:intron | 25.0% |
| ! | GCATTGAAAGTAAAATTTAG+GGG | + | chr3_4:4614520-4614539 | None:intergenic | 25.0% |
| ! | AACAAACTAAAAGTTAAGAC+TGG | + | chr3_4:4614572-4614591 | None:intergenic | 25.0% |
| !!! | AGTCTTAACTTTTAGTTTGT+TGG | - | chr3_4:4614571-4614590 | Msa0486570:intron | 25.0% |
| !! | GATAACAAATTCTAAAAGGT+GGG | + | chr3_4:4614719-4614738 | None:intergenic | 25.0% |
| !! | TGATAACAAATTCTAAAAGG+TGG | + | chr3_4:4614720-4614739 | None:intergenic | 25.0% |
| !! | ATCCCTTTTATGCTTTATAT+AGG | - | chr3_4:4615105-4615124 | Msa0486570:intron | 25.0% |
| ! | TGCCTATATAAAGCATAAAA+GGG | + | chr3_4:4615110-4615129 | None:intergenic | 25.0% |
| ! | ATGCCTATATAAAGCATAAA+AGG | + | chr3_4:4615111-4615130 | None:intergenic | 25.0% |
| !! | TCATAACTGAACACTTTTAT+TGG | + | chr3_4:4615150-4615169 | None:intergenic | 25.0% |
| ! | TTAAATTCACGCACAATTTA+AGG | - | chr3_4:4615420-4615439 | Msa0486570:intron | 25.0% |
| !! | TTTTTATAACCCATACAACT+AGG | + | chr3_4:4615485-4615504 | None:intergenic | 25.0% |
| !! | AGTTGTATGGGTTATAAAAA+TGG | - | chr3_4:4615485-4615504 | Msa0486570:intron | 25.0% |
| ! | AATACAGTTAAATTTCCAAG+AGG | - | chr3_4:4615765-4615784 | Msa0486570:intron | 25.0% |
| !! | AAAATTGCAATCTAGAGTAA+AGG | + | chr3_4:4615951-4615970 | None:intergenic | 25.0% |
| ! | AACTCATAGACTATAAGAAT+TGG | + | chr3_4:4615976-4615995 | None:intergenic | 25.0% |
| !! | GTTGTCTAACCATAAAATTT+TGG | - | chr3_4:4616057-4616076 | Msa0486570:intron | 25.0% |
| !!! | AGCTGTTTTCCAAAATTTTA+TGG | + | chr3_4:4616069-4616088 | None:intergenic | 25.0% |
| !!! | TTATGTCATTTTTGGAACAT+TGG | - | chr3_4:4616113-4616132 | Msa0486570:intron | 25.0% |
| ! | GAAATTTCACATATGGTTTA+TGG | - | chr3_4:4616148-4616167 | Msa0486570:intron | 25.0% |
| ! | AATGTATGAAATTTATAGCC+TGG | + | chr3_4:4616198-4616217 | None:intergenic | 25.0% |
| ! | ACAAAAGATACCAAAAAACA+AGG | + | chr3_4:4616258-4616277 | None:intergenic | 25.0% |
| ! | TATTCTACAGTACTATGATA+AGG | + | chr3_4:4616949-4616968 | None:intergenic | 25.0% |
| ! | CATAGTACTGTAGAATATAT+TGG | - | chr3_4:4616952-4616971 | Msa0486570:five_prime_UTR | 25.0% |
| ! | GAAATTTGAAACCCTAACAA+TGG | + | chr3_4:4612602-4612621 | None:intergenic | 30.0% |
| TATGATATGGTTGCGAAATT+GGG | + | chr3_4:4612659-4612678 | None:intergenic | 30.0% | |
| TTGAACAACACAACAACAAA+GGG | + | chr3_4:4612812-4612831 | None:intergenic | 30.0% | |
| ATTGAACAACACAACAACAA+AGG | + | chr3_4:4612813-4612832 | None:intergenic | 30.0% | |
| ! | GTTTGCATAGGATTTTCATA+TGG | - | chr3_4:4612914-4612933 | Msa0486570:CDS | 30.0% |
| CCAAGTTTAGTTATGGAAAA+TGG | + | chr3_4:4613189-4613208 | None:intergenic | 30.0% | |
| ! | CCATTTTCCATAACTAAACT+TGG | - | chr3_4:4613186-4613205 | Msa0486570:intron | 30.0% |
| TGTATGACCAAGTTTAGTTA+TGG | + | chr3_4:4613196-4613215 | None:intergenic | 30.0% | |
| AGTGATCTAATCTAGTTGAT+AGG | - | chr3_4:4613233-4613252 | Msa0486570:intron | 30.0% | |
| ! | AGCAAAGTATCTTATCTAGA+AGG | + | chr3_4:4613409-4613428 | None:intergenic | 30.0% |
| TTATCAGTGTTGTCAAATAG+CGG | - | chr3_4:4613742-4613761 | Msa0486570:intron | 30.0% | |
| ATTGTCCTACTAGAAAAACT+CGG | + | chr3_4:4613820-4613839 | None:intergenic | 30.0% | |
| ! | CGGGAAAAGAATAGAATTTT+AGG | - | chr3_4:4613885-4613904 | Msa0486570:CDS | 30.0% |
| TAGCGGAAAAAAGAGAATTT+AGG | - | chr3_4:4613954-4613973 | Msa0486570:intron | 30.0% | |
| AGCGGAAAAAAGAGAATTTA+GGG | - | chr3_4:4613955-4613974 | Msa0486570:intron | 30.0% | |
| AAAAAAAACACGGAGAATAG+AGG | + | chr3_4:4614133-4614152 | None:intergenic | 30.0% | |
| AAGCAATTAGTAATCTGTGT+TGG | - | chr3_4:4614473-4614492 | Msa0486570:intron | 30.0% | |
| ! | AATTAGTAATCTGTGTTGGT+CGG | - | chr3_4:4614477-4614496 | Msa0486570:intron | 30.0% |
| TAGGTATGACAATCATCAAT+CGG | - | chr3_4:4614648-4614667 | Msa0486570:intron | 30.0% | |
| ATATCTAGTATGTTGGAACT+AGG | + | chr3_4:4614750-4614769 | None:intergenic | 30.0% | |
| AGAAATTATCATTTACCTGG+TGG | + | chr3_4:4614901-4614920 | None:intergenic | 30.0% | |
| GTCAGAAATTATCATTTACC+TGG | + | chr3_4:4614904-4614923 | None:intergenic | 30.0% | |
| AGGCATAAGAAATATGAGTT+CGG | - | chr3_4:4614962-4614981 | Msa0486570:intron | 30.0% | |
| AGATGGAAAATAAAAGTGAC+GGG | + | chr3_4:4615002-4615021 | None:intergenic | 30.0% | |
| CAGATGGAAAATAAAAGTGA+CGG | + | chr3_4:4615003-4615022 | None:intergenic | 30.0% | |
| ! | ATATTACCAGAAGTACAGAT+TGG | - | chr3_4:4615172-4615191 | Msa0486570:intron | 30.0% |
| ! | TATTACCAGAAGTACAGATT+GGG | - | chr3_4:4615173-4615192 | Msa0486570:intron | 30.0% |
| ATTGATTGCTATCTTATCCA+AGG | - | chr3_4:4615247-4615266 | Msa0486570:intron | 30.0% | |
| TTTAACACAAATGTGCACAA+TGG | + | chr3_4:4615405-4615424 | None:intergenic | 30.0% | |
| CAAAAACACAAAGATGCATA+TGG | + | chr3_4:4615455-4615474 | None:intergenic | 30.0% | |
| ! | TTGTGTTTTTCCTAGTTGTA+TGG | - | chr3_4:4615472-4615491 | Msa0486570:intron | 30.0% |
| ! | TGTGTTTTTCCTAGTTGTAT+GGG | - | chr3_4:4615473-4615492 | Msa0486570:intron | 30.0% |
| TCTACAGTTAAATTTCCAAG+AGG | - | chr3_4:4615729-4615748 | Msa0486570:intron | 30.0% | |
| TTAAATTTCCAAGAGGACTA+CGG | - | chr3_4:4615736-4615755 | Msa0486570:intron | 30.0% | |
| TTAAATTTCCAAGAGGACTA+CGG | - | chr3_4:4615736-4615755 | Msa0486570:intron | 30.0% | |
| TAGACAACATAATTCTTCAC+AGG | + | chr3_4:4616045-4616064 | None:intergenic | 30.0% | |
| !!! | GTGGTCATTTATGTCATTTT+TGG | - | chr3_4:4616105-4616124 | Msa0486570:intron | 30.0% |
| !!! | GATTTGATGTCCTTGTTTTT+TGG | - | chr3_4:4616245-4616264 | Msa0486570:intron | 30.0% |
| TATTCTACCCAAGCATATAA+GGG | + | chr3_4:4616317-4616336 | None:intergenic | 30.0% | |
| !! | ACATTCAGGAGTTTTGATAT+TGG | - | chr3_4:4616352-4616371 | Msa0486570:intron | 30.0% |
| ATTACTAATGAATCCATCCA+AGG | - | chr3_4:4616621-4616640 | Msa0486570:intron | 30.0% | |
| ! | TTGAATTCAACTTTCAGGTA+AGG | - | chr3_4:4616666-4616685 | Msa0486570:intron | 30.0% |
| !!! | TCTGGTGGATTTTTCTTTTT+TGG | - | chr3_4:4616781-4616800 | Msa0486570:intron | 30.0% |
| !! | TTTGGATTTCTTGCTTTTCT+TGG | - | chr3_4:4616799-4616818 | Msa0486570:intron | 30.0% |
| ! | TAGAATATATTGGTCTGACA+GGG | - | chr3_4:4616962-4616981 | Msa0486570:five_prime_UTR | 30.0% |
| !! | CGAAATTTTGAGAGTTTAGT+TGG | + | chr3_4:4617042-4617061 | None:intergenic | 30.0% |
| ATTTCAGAGACCTTGCAAAT+TGG | + | chr3_4:4612530-4612549 | None:intergenic | 35.0% | |
| !! | TTGCAAGGTCTCTGAAATTT+CGG | - | chr3_4:4612532-4612551 | Msa0486570:three_prime_UTR | 35.0% |
| TTGAAACCCTAACAATGGTT+TGG | + | chr3_4:4612597-4612616 | None:intergenic | 35.0% | |
| AGGGTTTCAAATTTCTCACT+CGG | - | chr3_4:4612607-4612626 | Msa0486570:three_prime_UTR | 35.0% | |
| GGTCGAATTATGGATGAATT+TGG | + | chr3_4:4612638-4612657 | None:intergenic | 35.0% | |
| CTATGATATGGTTGCGAAAT+TGG | + | chr3_4:4612660-4612679 | None:intergenic | 35.0% | |
| ! | CGCAACCATATCATAGTTTT+CGG | - | chr3_4:4612664-4612683 | Msa0486570:three_prime_UTR | 35.0% |
| ATGAGCCGAAAACTATGATA+TGG | + | chr3_4:4612672-4612691 | None:intergenic | 35.0% | |
| !! | ATCGTTGATGGATTACGATA+CGG | + | chr3_4:4612703-4612722 | None:intergenic | 35.0% |
| ! | TGTAGTTTGTAGAAATGGGT+TGG | - | chr3_4:4612888-4612907 | Msa0486570:CDS | 35.0% |
| TGCTAGAGAGTTTAGAAGAT+TGG | - | chr3_4:4612994-4613013 | Msa0486570:intron | 35.0% | |
| ! | GGTCATACATGTGAGTTTTT+AGG | - | chr3_4:4613207-4613226 | Msa0486570:intron | 35.0% |
| ! | ACTAATTAAAGGCCGAGTTT+TGG | + | chr3_4:4613373-4613392 | None:intergenic | 35.0% |
| ! | GGTTTGCTTAATTATGTACG+TGG | - | chr3_4:4613600-4613619 | Msa0486570:intron | 35.0% |
| ! | TCATATTCTGGTTGGAATGT+TGG | - | chr3_4:4613664-4613683 | Msa0486570:intron | 35.0% |
| TTACATCTGCTAGCAGAAAT+TGG | + | chr3_4:4613856-4613875 | None:intergenic | 35.0% | |
| ATTTCTGCTAGCAGATGTAA+CGG | - | chr3_4:4613856-4613875 | Msa0486570:CDS | 35.0% | |
| TGAAATAGCAGGTAATGTTG+CGG | + | chr3_4:4614204-4614223 | None:intergenic | 35.0% | |
| !! | TTACCTGCTATTTCACATAG+TGG | - | chr3_4:4614209-4614228 | Msa0486570:intron | 35.0% |
| AATCCACTATGTGAAATAGC+AGG | + | chr3_4:4614215-4614234 | None:intergenic | 35.0% | |
| TTTAGTCTAATGAAGCTCCA+TGG | - | chr3_4:4614284-4614303 | Msa0486570:intron | 35.0% | |
| TTAGTCTAATGAAGCTCCAT+GGG | - | chr3_4:4614285-4614304 | Msa0486570:intron | 35.0% | |
| TAAATCCAGTCGACAAAACA+AGG | + | chr3_4:4614400-4614419 | None:intergenic | 35.0% | |
| !! | GTTTTGTCGACTGGATTTAT+TGG | - | chr3_4:4614401-4614420 | Msa0486570:intron | 35.0% |
| TGGAAGTCTGTTGTAGAAAT+AGG | - | chr3_4:4614629-4614648 | Msa0486570:intron | 35.0% | |
| AGGTATGACAATCATCAATC+GGG | - | chr3_4:4614649-4614668 | Msa0486570:intron | 35.0% | |
| CATTTACCTGGTGGTAATTT+GGG | + | chr3_4:4614892-4614911 | None:intergenic | 35.0% | |
| TCATTTACCTGGTGGTAATT+TGG | + | chr3_4:4614893-4614912 | None:intergenic | 35.0% | |
| GATGGAAAATAAAAGTGACG+GGG | + | chr3_4:4615001-4615020 | None:intergenic | 35.0% | |
| ATGTGTAAAACAGGATACAG+CGG | + | chr3_4:4615081-4615100 | None:intergenic | 35.0% | |
| GGGATATCTATGTGTAAAAC+AGG | + | chr3_4:4615090-4615109 | None:intergenic | 35.0% | |
| AGAACACACATCAAATTCAC+TGG | + | chr3_4:4615227-4615246 | None:intergenic | 35.0% | |
| CAAACACATGCATTAATCCT+TGG | + | chr3_4:4615267-4615286 | None:intergenic | 35.0% | |
| CAAGGATTAATGCATGTGTT+TGG | - | chr3_4:4615265-4615284 | Msa0486570:intron | 35.0% | |
| ! | AATGTGTCAATTAAAAGCGC+GGG | + | chr3_4:4615294-4615313 | None:intergenic | 35.0% |
| GAATGTGTCAATTAAAAGCG+CGG | + | chr3_4:4615295-4615314 | None:intergenic | 35.0% | |
| AGTTGACTGGATACTATTTG+AGG | - | chr3_4:4615353-4615372 | Msa0486570:intron | 35.0% | |
| ! | GATACTATTTGAGGTGAATG+AGG | - | chr3_4:4615362-4615381 | Msa0486570:intron | 35.0% |
| AGAAAACCAAATGTGTCAGA+TGG | + | chr3_4:4615587-4615606 | None:intergenic | 35.0% | |
| TATAATATGTGCTGCAGCTT+TGG | - | chr3_4:4615872-4615891 | Msa0486570:intron | 35.0% | |
| CAACATAATTCTTCACAGGT+CGG | + | chr3_4:4616041-4616060 | None:intergenic | 35.0% | |
| ACAGCTTCATTACTCATTAG+AGG | - | chr3_4:4616083-4616102 | Msa0486570:intron | 35.0% | |
| ! | AGAAGAGGACTTTTAAGCTT+AGG | + | chr3_4:4616288-4616307 | None:intergenic | 35.0% |
| GTATTCTACCCAAGCATATA+AGG | + | chr3_4:4616318-4616337 | None:intergenic | 35.0% | |
| TTGCATTCTGCATATATCAG+AGG | + | chr3_4:4616475-4616494 | None:intergenic | 35.0% | |
| TCAACAATTACCTGGAAGAT+GGG | + | chr3_4:4616549-4616568 | None:intergenic | 35.0% | |
| TCATTCAGTCAACAATTACC+TGG | + | chr3_4:4616557-4616576 | None:intergenic | 35.0% | |
| CTGAAAGTTGAATTCAACCA+TGG | + | chr3_4:4616663-4616682 | None:intergenic | 35.0% | |
| CATGGTTGAATTCAACTTTC+AGG | - | chr3_4:4616661-4616680 | Msa0486570:intron | 35.0% | |
| TTCCACCATCATCAATTTGT+GGG | + | chr3_4:4616699-4616718 | None:intergenic | 35.0% | |
| ! | GTAGAATATATTGGTCTGAC+AGG | - | chr3_4:4616961-4616980 | Msa0486570:five_prime_UTR | 35.0% |
| AAACTCTCAAAATTTCGCTG+TGG | - | chr3_4:4617045-4617064 | Msa0486570:five_prime_UTR | 35.0% | |
| !! | TGCAAGGTCTCTGAAATTTC+GGG | - | chr3_4:4612533-4612552 | Msa0486570:three_prime_UTR | 40.0% |
| TCCTCTTCCAAACCATTGTT+AGG | - | chr3_4:4612587-4612606 | Msa0486570:three_prime_UTR | 40.0% | |
| CCTCTTCCAAACCATTGTTA+GGG | - | chr3_4:4612588-4612607 | Msa0486570:three_prime_UTR | 40.0% | |
| TGCGAAATTGGGTCGAATTA+TGG | + | chr3_4:4612648-4612667 | None:intergenic | 40.0% | |
| AAAATATGTAGCGTACCACG+CGG | + | chr3_4:4612727-4612746 | None:intergenic | 40.0% | |
| !! | AGTTTGTAGAAATGGGTTGG+TGG | - | chr3_4:4612891-4612910 | Msa0486570:CDS | 40.0% |
| !! | GTTTGTAGAAATGGGTTGGT+GGG | - | chr3_4:4612892-4612911 | Msa0486570:CDS | 40.0% |
| ! | GCTTTAAACGCCTACGTAAA+AGG | - | chr3_4:4613275-4613294 | Msa0486570:intron | 40.0% |
| AAACGCCTACGTAAAAGGTT+AGG | - | chr3_4:4613280-4613299 | Msa0486570:intron | 40.0% | |
| AACGCCTACGTAAAAGGTTA+GGG | - | chr3_4:4613281-4613300 | Msa0486570:intron | 40.0% | |
| CTGCTGTTGAAACCAAAACT+CGG | - | chr3_4:4613358-4613377 | Msa0486570:intron | 40.0% | |
| ! | TAGCGTTGTGGTTTTCATAG+TGG | + | chr3_4:4613796-4613815 | None:intergenic | 40.0% |
| !! | GCTATCCGAGTTTTTCTAGT+AGG | - | chr3_4:4613812-4613831 | Msa0486570:CDS | 40.0% |
| GACTTATTTCAACCGCTATG+CGG | - | chr3_4:4614164-4614183 | Msa0486570:intron | 40.0% | |
| AAATAGAAGAAGCCGCATAG+CGG | + | chr3_4:4614179-4614198 | None:intergenic | 40.0% | |
| CAAGTACGTGTTATCACTAG+CGG | + | chr3_4:4614264-4614283 | None:intergenic | 40.0% | |
| TAGTCTAATGAAGCTCCATG+GGG | - | chr3_4:4614286-4614305 | Msa0486570:intron | 40.0% | |
| TTACTAATTGCTTGCGCACA+GGG | + | chr3_4:4614466-4614485 | None:intergenic | 40.0% | |
| ATTACTAATTGCTTGCGCAC+AGG | + | chr3_4:4614467-4614486 | None:intergenic | 40.0% | |
| ATGACAATCATCAATCGGGT+TGG | - | chr3_4:4614653-4614672 | Msa0486570:intron | 40.0% | |
| TGACAATCATCAATCGGGTT+GGG | - | chr3_4:4614654-4614673 | Msa0486570:intron | 40.0% | |
| !! | GTATGTCACTTCAAGTTGAC+TGG | - | chr3_4:4615340-4615359 | Msa0486570:intron | 40.0% |
| ! | ATTTGAGGTGAATGAGGTGA+AGG | - | chr3_4:4615368-4615387 | Msa0486570:intron | 40.0% |
| AATACTGCCTTTAGCAGGAA+GGG | + | chr3_4:4615539-4615558 | None:intergenic | 40.0% | |
| ! | GTATAGCAGGACAAGGATTT+TGG | + | chr3_4:4615565-4615584 | None:intergenic | 40.0% |
| AATGTGTCAGATGGTATAGC+AGG | + | chr3_4:4615578-4615597 | None:intergenic | 40.0% | |
| GCTATACCATCTGACACATT+TGG | - | chr3_4:4615578-4615597 | Msa0486570:intron | 40.0% | |
| AGTTGTACACAGTTTCCACA+TGG | - | chr3_4:4615819-4615838 | Msa0486570:intron | 40.0% | |
| GCTTCATTACTCATTAGAGG+TGG | - | chr3_4:4616086-4616105 | Msa0486570:intron | 40.0% | |
| GGTTTATGGATTCTGAGCTT+TGG | - | chr3_4:4616162-4616181 | Msa0486570:intron | 40.0% | |
| GCTTAAAAGTCCTCTTCTTG+TGG | - | chr3_4:4616290-4616309 | Msa0486570:intron | 40.0% | |
| ATATAAGGGACCACAAGAAG+AGG | + | chr3_4:4616303-4616322 | None:intergenic | 40.0% | |
| TTGTGGTCCCTTATATGCTT+GGG | - | chr3_4:4616307-4616326 | Msa0486570:intron | 40.0% | |
| GTCAACAATTACCTGGAAGA+TGG | + | chr3_4:4616550-4616569 | None:intergenic | 40.0% | |
| AAGTCCCCACAAATTGATGA+TGG | - | chr3_4:4616691-4616710 | Msa0486570:intron | 40.0% | |
| TCCACCATCATCAATTTGTG+GGG | + | chr3_4:4616698-4616717 | None:intergenic | 40.0% | |
| CTTCCACCATCATCAATTTG+TGG | + | chr3_4:4616700-4616719 | None:intergenic | 40.0% | |
| !! | CAAATTGATGATGGTGGAAG+TGG | - | chr3_4:4616700-4616719 | Msa0486570:intron | 40.0% |
| GACAAAGAAAGTGAAGACGA+AGG | - | chr3_4:4616832-4616851 | Msa0486570:intron | 40.0% | |
| GAAAGTGAAGACGAAGGTTA+CGG | - | chr3_4:4616838-4616857 | Msa0486570:intron | 40.0% | |
| !! | GCAAGGTCTCTGAAATTTCG+GGG | - | chr3_4:4612534-4612553 | Msa0486570:three_prime_UTR | 45.0% |
| GGATAGCTTCAGAAGCAGTT+TGG | + | chr3_4:4612560-4612579 | None:intergenic | 45.0% | |
| GGTTTGGAAGAGGAAGATGA+TGG | + | chr3_4:4612581-4612600 | None:intergenic | 45.0% | |
| ! | CCCTAACAATGGTTTGGAAG+AGG | + | chr3_4:4612591-4612610 | None:intergenic | 45.0% |
| ! | CATGCCCTAACCTTTTACGT+AGG | + | chr3_4:4613288-4613307 | None:intergenic | 45.0% |
| TGCCAAAAACAACACCTTGC+CGG | - | chr3_4:4613317-4613336 | Msa0486570:intron | 45.0% | |
| AAATACCAATAGAGCCGGCA+AGG | + | chr3_4:4613334-4613353 | None:intergenic | 45.0% | |
| GCCAGAAATACCAATAGAGC+CGG | + | chr3_4:4613339-4613358 | None:intergenic | 45.0% | |
| GAAAAACTCGGATAGCGTTG+TGG | + | chr3_4:4613808-4613827 | None:intergenic | 45.0% | |
| GCTAGCAGAAATTGGCATAG+CGG | + | chr3_4:4613848-4613867 | None:intergenic | 45.0% | |
| AGCAGATGTAACGGCAATAG+CGG | - | chr3_4:4613865-4613884 | Msa0486570:CDS | 45.0% | |
| GCTAGCATACGAAACTCTTC+AGG | + | chr3_4:4613929-4613948 | None:intergenic | 45.0% | |
| TCGTATGCTAGCAGCAATAG+CGG | - | chr3_4:4613937-4613956 | Msa0486570:intron | 45.0% | |
| AGTCTAATGAAGCTCCATGG+GGG | - | chr3_4:4614287-4614306 | Msa0486570:intron | 45.0% | |
| ATTCTCCAATACTTCCCCCA+TGG | + | chr3_4:4614304-4614323 | None:intergenic | 45.0% | |
| !!! | TGTCTCCTTGTTTTGTCGAC+TGG | - | chr3_4:4614392-4614411 | Msa0486570:intron | 45.0% |
| TACTAATTGCTTGCGCACAG+GGG | + | chr3_4:4614465-4614484 | None:intergenic | 45.0% | |
| ! | TAGTAATCTGTGTTGGTCGG+TGG | - | chr3_4:4614480-4614499 | Msa0486570:intron | 45.0% |
| ! | GACAATCATCAATCGGGTTG+GGG | - | chr3_4:4614655-4614674 | Msa0486570:intron | 45.0% |
| !! | ACAATCATCAATCGGGTTGG+GGG | - | chr3_4:4614656-4614675 | Msa0486570:intron | 45.0% |
| ACTGCACTAGTAGCCAACAT+TGG | + | chr3_4:4614859-4614878 | None:intergenic | 45.0% | |
| TCTTTGCCCAAATTACCACC+AGG | - | chr3_4:4614883-4614902 | Msa0486570:intron | 45.0% | |
| GATTGCCCAATCTGTACTTC+TGG | + | chr3_4:4615181-4615200 | None:intergenic | 45.0% | |
| CATCAAATTCACTGGCAGGA+AGG | + | chr3_4:4615219-4615238 | None:intergenic | 45.0% | |
| CACACATCAAATTCACTGGC+AGG | + | chr3_4:4615223-4615242 | None:intergenic | 45.0% | |
| GAAGGGATGGAATGGAATCA+AGG | + | chr3_4:4615522-4615541 | None:intergenic | 45.0% | |
| TTTAGCAGGAAGGGATGGAA+TGG | + | chr3_4:4615530-4615549 | None:intergenic | 45.0% | |
| ATTCCATCCCTTCCTGCTAA+AGG | - | chr3_4:4615529-4615548 | Msa0486570:intron | 45.0% | |
| CAATACTGCCTTTAGCAGGA+AGG | + | chr3_4:4615540-4615559 | None:intergenic | 45.0% | |
| GGATCAATACTGCCTTTAGC+AGG | + | chr3_4:4615544-4615563 | None:intergenic | 45.0% | |
| TCAGATGGTATAGCAGGACA+AGG | + | chr3_4:4615572-4615591 | None:intergenic | 45.0% | |
| TTTGTGTGCACAGTGAGAAG+AGG | - | chr3_4:4615678-4615697 | Msa0486570:intron | 45.0% | |
| TTAACAGTCCGTAGTCCTCT+TGG | + | chr3_4:4615747-4615766 | None:intergenic | 45.0% | |
| TTAACAGTCCGTAGTCCTCT+TGG | + | chr3_4:4615747-4615766 | None:intergenic | 45.0% | |
| ACACAGTTTCCACATGGTAG+AGG | - | chr3_4:4615825-4615844 | Msa0486570:intron | 45.0% | |
| TAGAGGAACTCGTTCTACTC+AGG | - | chr3_4:4615842-4615861 | Msa0486570:intron | 45.0% | |
| CTTGTGGTCCCTTATATGCT+TGG | - | chr3_4:4616306-4616325 | Msa0486570:intron | 45.0% | |
| CCTGGAAGATGGGTAATTGT+TGG | + | chr3_4:4616539-4616558 | None:intergenic | 45.0% | |
| CCAACAATTACCCATCTTCC+AGG | - | chr3_4:4616536-4616555 | Msa0486570:intron | 45.0% | |
| TCCATCCAAGGATGCTCTAA+TGG | - | chr3_4:4616633-4616652 | Msa0486570:intron | 45.0% | |
| !! | TCCCCACAAATTGATGATGG+TGG | - | chr3_4:4616694-4616713 | Msa0486570:intron | 45.0% |
| !! | CTCGTGATGATGATGATGGT+GGG | - | chr3_4:4616731-4616750 | Msa0486570:intron | 45.0% |
| !! | TCGTGATGATGATGATGGTG+GGG | - | chr3_4:4616732-4616751 | Msa0486570:intron | 45.0% |
| AAGACGAAGGTTACGGTTAC+AGG | - | chr3_4:4616845-4616864 | Msa0486570:intron | 45.0% | |
| AGACGAAGGTTACGGTTACA+GGG | - | chr3_4:4616846-4616865 | Msa0486570:intron | 45.0% | |
| GTTACGGTTACAGGGATAAC+CGG | - | chr3_4:4616854-4616873 | Msa0486570:intron | 45.0% | |
| !!! | AAAAATTGAATTTTTATATA+CGG | + | chr3_4:4612767-4612786 | None:intergenic | 5.0% |
| !!! | ATATAAAAATTCAATTTTTA+TGG | - | chr3_4:4612768-4612787 | Msa0486570:CDS | 5.0% |
| !! | ATTATATATTAAAAAAAACA+CGG | + | chr3_4:4614143-4614162 | None:intergenic | 5.0% |
| AATCCATCAACGATTCCGCG+TGG | - | chr3_4:4612709-4612728 | Msa0486570:three_prime_UTR | 50.0% | |
| !! | ATGGGTTGGTGGGTTTGCAT+AGG | - | chr3_4:4612902-4612921 | Msa0486570:CDS | 50.0% |
| !!! | AGCCGGCAAGGTGTTGTTTT+TGG | + | chr3_4:4613322-4613341 | None:intergenic | 50.0% |
| ! | GCCGGCTCTATTGGTATTTC+TGG | - | chr3_4:4613335-4613354 | Msa0486570:intron | 50.0% |
| GCAGATGTAACGGCAATAGC+GGG | - | chr3_4:4613866-4613885 | Msa0486570:CDS | 50.0% | |
| !! | CACTAGCGGACTGCGTAAAA+CGG | + | chr3_4:4614250-4614269 | None:intergenic | 50.0% |
| ! | AAGCTCCATGGGGGAAGTAT+TGG | - | chr3_4:4614296-4614315 | Msa0486570:intron | 50.0% |
| TTGGTGTGCAGGCAGAAAAC+TGG | + | chr3_4:4614840-4614859 | None:intergenic | 50.0% | |
| TTCTGCCTGCACACCAATGT+TGG | - | chr3_4:4614843-4614862 | Msa0486570:intron | 50.0% | |
| AGTAGCCAACATTGGTGTGC+AGG | + | chr3_4:4614851-4614870 | None:intergenic | 50.0% | |
| TGCACGTATCTCGTAGCAGA+TGG | + | chr3_4:4615019-4615038 | None:intergenic | 50.0% | |
| CACCATTCTCTTCCACACAG+TGG | + | chr3_4:4615707-4615726 | None:intergenic | 50.0% | |
| GAACGAGTTCCTCTACCATG+TGG | + | chr3_4:4615837-4615856 | None:intergenic | 50.0% | |
| ! | AGCTTTGGCATACTGCTTCC+AGG | - | chr3_4:4616177-4616196 | Msa0486570:intron | 50.0% |
| ! | GCCATTAGAGCATCCTTGGA+TGG | + | chr3_4:4616637-4616656 | None:intergenic | 50.0% |
| ! | GCAAGCCATTAGAGCATCCT+TGG | + | chr3_4:4616641-4616660 | None:intergenic | 50.0% |
| ! | GATGCTCTAATGGCTTGCCA+TGG | - | chr3_4:4616643-4616662 | Msa0486570:intron | 50.0% |
| CCATCATCATCATCACGAGG+CGG | + | chr3_4:4616730-4616749 | None:intergenic | 50.0% | |
| CCACCATCATCATCATCACG+AGG | + | chr3_4:4616733-4616752 | None:intergenic | 50.0% | |
| !! | CCTCGTGATGATGATGATGG+TGG | - | chr3_4:4616730-4616749 | Msa0486570:intron | 50.0% |
| !! | CGTGATGATGATGATGGTGG+GGG | - | chr3_4:4616733-4616752 | Msa0486570:intron | 50.0% |
| GTTACAGGGATAACCGGAGA+AGG | - | chr3_4:4616860-4616879 | Msa0486570:intron | 50.0% | |
| GTACCACGCGGAATCGTTGA+TGG | + | chr3_4:4612715-4612734 | None:intergenic | 55.0% | |
| !! | CAACACCTTGCCGGCTCTAT+TGG | - | chr3_4:4613326-4613345 | Msa0486570:intron | 55.0% |
| !! | TAGCGGACTGCGTAAAACGG+TGG | + | chr3_4:4614247-4614266 | None:intergenic | 55.0% |
| CTGCCTTTAGCAGGAAGGGA+TGG | + | chr3_4:4615535-4615554 | None:intergenic | 55.0% | |
| GTGTGCACAGTGAGAAGAGG+TGG | - | chr3_4:4615681-4615700 | Msa0486570:intron | 55.0% | |
| GGCCACTGTGTGGAAGAGAA+TGG | - | chr3_4:4615702-4615721 | Msa0486570:intron | 55.0% | |
| ! | CCGCCTCGTGATGATGATGA+TGG | - | chr3_4:4616727-4616746 | Msa0486570:intron | 55.0% |
| !! | GATGATGATGATGGTGGGGG+AGG | - | chr3_4:4616736-4616755 | Msa0486570:intron | 55.0% |
| ACAGGGATAACCGGAGAAGG+CGG | - | chr3_4:4616863-4616882 | Msa0486570:intron | 55.0% | |
| TAACCGGAGAAGGCGGTGAT+AGG | - | chr3_4:4616870-4616889 | Msa0486570:intron | 55.0% | |
| TTGCCTATCACCGCCTTCTC+CGG | + | chr3_4:4616876-4616895 | None:intergenic | 55.0% | |
| GAGAAGAGGTGGCCACTGTG+TGG | - | chr3_4:4615692-4615711 | Msa0486570:intron | 60.0% | |
| !! | GATGATGATGGTGGGGGAGG+AGG | - | chr3_4:4616739-4616758 | Msa0486570:intron | 60.0% |
| !! | GATGATGGTGGGGGAGGAGG+TGG | - | chr3_4:4616742-4616761 | Msa0486570:intron | 65.0% |
| GAGGTGGAGGTGGAGGCAAC+TGG | - | chr3_4:4616758-4616777 | Msa0486570:intron | 65.0% | |
| GGAGGTGGAGGCAACTGGTC+TGG | - | chr3_4:4616763-4616782 | Msa0486570:intron | 65.0% | |
| ! | GGTGGAGGCAACTGGTCTGG+TGG | - | chr3_4:4616766-4616785 | Msa0486570:intron | 65.0% |
| !! | GATGGTGGGGGAGGAGGTGG+AGG | - | chr3_4:4616745-4616764 | Msa0486570:intron | 70.0% |
| GGTGGGGGAGGAGGTGGAGG+TGG | - | chr3_4:4616748-4616767 | Msa0486570:intron | 75.0% | |
| GGGGGAGGAGGTGGAGGTGG+AGG | - | chr3_4:4616751-4616770 | Msa0486570:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 4612526 | 4617113 | 4612526 | ID=Msa0486570;Name=Msa0486570 |
| chr3_4 | mRNA | 4612526 | 4617113 | 4612526 | ID=Msa0486570-mRNA-1;Parent=Msa0486570;Name=Msa0486570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=223|1|1|1|0.75|0.6|5|225|174 |
| chr3_4 | exon | 4612526 | 4612956 | 4612526 | ID=Msa0486570-mRNA-1:exon:1738;Parent=Msa0486570-mRNA-1 |
| chr3_4 | exon | 4613082 | 4613151 | 4613082 | ID=Msa0486570-mRNA-1:exon:1737;Parent=Msa0486570-mRNA-1 |
| chr3_4 | exon | 4613746 | 4613948 | 4613746 | ID=Msa0486570-mRNA-1:exon:1736;Parent=Msa0486570-mRNA-1 |
| chr3_4 | exon | 4614735 | 4614798 | 4614735 | ID=Msa0486570-mRNA-1:exon:1735;Parent=Msa0486570-mRNA-1 |
| chr3_4 | exon | 4616909 | 4617113 | 4616909 | ID=Msa0486570-mRNA-1:exon:1734;Parent=Msa0486570-mRNA-1 |
| chr3_4 | five_prime_UTR | 4616909 | 4617113 | 4616909 | ID=Msa0486570-mRNA-1:five_prime_utr;Parent=Msa0486570-mRNA-1 |
| chr3_4 | five_prime_UTR | 4614781 | 4614798 | 4614781 | ID=Msa0486570-mRNA-1:five_prime_utr;Parent=Msa0486570-mRNA-1 |
| chr3_4 | CDS | 4614735 | 4614780 | 4614735 | ID=Msa0486570-mRNA-1:cds;Parent=Msa0486570-mRNA-1 |
| chr3_4 | CDS | 4613746 | 4613948 | 4613746 | ID=Msa0486570-mRNA-1:cds;Parent=Msa0486570-mRNA-1 |
| chr3_4 | CDS | 4613082 | 4613151 | 4613082 | ID=Msa0486570-mRNA-1:cds;Parent=Msa0486570-mRNA-1 |
| chr3_4 | CDS | 4612751 | 4612956 | 4612751 | ID=Msa0486570-mRNA-1:cds;Parent=Msa0486570-mRNA-1 |
| chr3_4 | three_prime_UTR | 4612526 | 4612750 | 4612526 | ID=Msa0486570-mRNA-1:three_prime_utr;Parent=Msa0486570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
