Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838930 | XP_003612367.1 | 96.340 | 847 | 29 | 2 | 1 | 846 | 1 | 846 | 0.0 | 1670 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838930 | G7K186 | 96.340 | 847 | 29 | 2 | 1 | 846 | 1 | 846 | 0.0 | 1670 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015670 | Msa0838930 | 0.810417 | 1.164674e-50 | -8.615850e-47 |
| Msa0028320 | Msa0838930 | 0.809876 | 1.523476e-50 | -8.615850e-47 |
| Msa0036140 | Msa0838930 | 0.801568 | 8.470063e-49 | -8.615850e-47 |
| Msa0040620 | Msa0838930 | 0.802549 | 5.322453e-49 | -8.615850e-47 |
| Msa0042550 | Msa0838930 | 0.842364 | 2.704935e-58 | -8.615850e-47 |
| Msa0045550 | Msa0838930 | 0.808882 | 2.489590e-50 | -8.615850e-47 |
| Msa0045910 | Msa0838930 | 0.824314 | 8.632043e-54 | -8.615850e-47 |
| Msa0055070 | Msa0838930 | 0.844852 | 5.848062e-59 | -8.615850e-47 |
| Msa0064110 | Msa0838930 | 0.813391 | 2.620723e-51 | -8.615850e-47 |
| Msa0077450 | Msa0838930 | 0.847509 | 1.105690e-59 | -8.615850e-47 |
| Msa0092410 | Msa0838930 | 0.806758 | 7.041846e-50 | -8.615850e-47 |
| Msa0101020 | Msa0838930 | 0.843986 | 1.000008e-58 | -8.615850e-47 |
| Msa0608200 | Msa0838930 | 0.811748 | 5.995411e-51 | -8.615850e-47 |
| Msa0613440 | Msa0838930 | 0.803534 | 3.329376e-49 | -8.615850e-47 |
| Msa0613460 | Msa0838930 | 0.833000 | 6.856072e-56 | -8.615850e-47 |
| Msa0615010 | Msa0838930 | 0.816900 | 4.357136e-52 | -8.615850e-47 |
| Msa0631330 | Msa0838930 | 0.814255 | 1.691106e-51 | -8.615850e-47 |
| Msa0648520 | Msa0838930 | 0.838985 | 2.076900e-57 | -8.615850e-47 |
| Msa0654010 | Msa0838930 | 0.819146 | 1.353283e-52 | -8.615850e-47 |
| Msa0657610 | Msa0838930 | 0.800444 | 1.437098e-48 | -8.615850e-47 |
| Msa0658570 | Msa0838930 | 0.807376 | 5.209570e-50 | -8.615850e-47 |
| Msa0659510 | Msa0838930 | 0.806782 | 6.960341e-50 | -8.615850e-47 |
| Msa0662570 | Msa0838930 | 0.821899 | 3.158557e-53 | -8.615850e-47 |
| Msa0688150 | Msa0838930 | 0.801272 | 9.738672e-49 | -8.615850e-47 |
| Msa0691050 | Msa0838930 | 0.869350 | 3.306101e-66 | -8.615850e-47 |
| Msa0693380 | Msa0838930 | 0.827509 | 1.503960e-54 | -8.615850e-47 |
| Msa0695870 | Msa0838930 | 0.813934 | 1.990642e-51 | -8.615850e-47 |
| Msa0709160 | Msa0838930 | 0.817137 | 3.854637e-52 | -8.615850e-47 |
| Msa0711790 | Msa0838930 | 0.801043 | 1.084800e-48 | -8.615850e-47 |
| Msa0717020 | Msa0838930 | 0.809880 | 1.520685e-50 | -8.615850e-47 |
| Msa0718070 | Msa0838930 | 0.877281 | 7.127155e-69 | -8.615850e-47 |
| Msa0721340 | Msa0838930 | 0.812004 | 5.272391e-51 | -8.615850e-47 |
| Msa0724210 | Msa0838930 | 0.800361 | 1.494135e-48 | -8.615850e-47 |
| Msa0731940 | Msa0838930 | 0.807225 | 5.609179e-50 | -8.615850e-47 |
| Msa0732840 | Msa0838930 | 0.847077 | 1.452706e-59 | -8.615850e-47 |
| Msa0744040 | Msa0838930 | 0.804665 | 1.937283e-49 | -8.615850e-47 |
| Msa0747650 | Msa0838930 | 0.823175 | 1.595705e-53 | -8.615850e-47 |
| Msa0751260 | Msa0838930 | 0.809128 | 2.204766e-50 | -8.615850e-47 |
| Msa0766360 | Msa0838930 | 0.813996 | 1.928580e-51 | -8.615850e-47 |
| Msa0773310 | Msa0838930 | 0.835195 | 1.932259e-56 | -8.615850e-47 |
| Msa0790680 | Msa0838930 | 0.805105 | 1.567166e-49 | -8.615850e-47 |
| Msa0794700 | Msa0838930 | 0.816644 | 4.972258e-52 | -8.615850e-47 |
| Msa0795070 | Msa0838930 | 0.834250 | 3.341313e-56 | -8.615850e-47 |
| Msa0800770 | Msa0838930 | 0.990954 | 3.752059e-185 | -8.615850e-47 |
| Msa0810220 | Msa0838930 | 0.814831 | 1.260822e-51 | -8.615850e-47 |
| Msa0810760 | Msa0838930 | 0.834051 | 3.748679e-56 | -8.615850e-47 |
| Msa0816710 | Msa0838930 | 0.814982 | 1.167454e-51 | -8.615850e-47 |
| Msa0817110 | Msa0838930 | 0.808166 | 3.538768e-50 | -8.615850e-47 |
| Msa0827150 | Msa0838930 | 0.810089 | 1.370759e-50 | -8.615850e-47 |
| Msa0828540 | Msa0838930 | 0.802527 | 5.379081e-49 | -8.615850e-47 |
| Msa0830510 | Msa0838930 | 0.811034 | 8.564256e-51 | -8.615850e-47 |
| Msa0831850 | Msa0838930 | 0.808368 | 3.205433e-50 | -8.615850e-47 |
| Msa0838930 | Msa0839000 | 0.884586 | 1.690464e-71 | -8.615850e-47 |
| Msa0838930 | Msa0847880 | 0.806539 | 7.831606e-50 | -8.615850e-47 |
| Msa0838930 | Msa0870530 | 0.838979 | 2.084267e-57 | -8.615850e-47 |
| Msa0838930 | Msa0873860 | 0.810571 | 1.078995e-50 | -8.615850e-47 |
| Msa0838930 | Msa0874630 | 0.849104 | 4.006538e-60 | -8.615850e-47 |
| Msa0838930 | Msa0891040 | 0.805268 | 1.449295e-49 | -8.615850e-47 |
| Msa0838930 | Msa0900620 | 0.811779 | 5.903427e-51 | -8.615850e-47 |
| Msa0838930 | Msa0902710 | 0.819083 | 1.399167e-52 | -8.615850e-47 |
| Msa0838930 | Msa0902830 | 0.801593 | 8.367441e-49 | -8.615850e-47 |
| Msa0838930 | Msa0903700 | 0.820450 | 6.815667e-53 | -8.615850e-47 |
| Msa0838930 | Msa0926890 | 0.811809 | 5.813046e-51 | -8.615850e-47 |
| Msa0838930 | Msa0930910 | -0.821644 | 3.618574e-53 | -8.615850e-47 |
| Msa0838930 | Msa0936210 | 0.822196 | 2.696412e-53 | -8.615850e-47 |
| Msa0838930 | Msa0969520 | 0.804297 | 2.311628e-49 | -8.615850e-47 |
| Msa0838930 | Msa0973150 | 0.800735 | 1.253857e-48 | -8.615850e-47 |
| Msa0838930 | Msa0973600 | 0.820494 | 6.657938e-53 | -8.615850e-47 |
| Msa0838930 | Msa0976290 | 0.813832 | 2.096167e-51 | -8.615850e-47 |
| Msa0838930 | Msa0981040 | 0.811257 | 7.665249e-51 | -8.615850e-47 |
| Msa0838930 | Msa0982240 | 0.817867 | 2.638428e-52 | -8.615850e-47 |
| Msa0838930 | Msa0990960 | 0.807511 | 4.877554e-50 | -8.615850e-47 |
| Msa0838930 | Msa1000290 | 0.803403 | 3.544176e-49 | -8.615850e-47 |
| Msa0838930 | Msa1008750 | 0.839287 | 1.734083e-57 | -8.615850e-47 |
| Msa0838930 | Msa1009390 | 0.802257 | 6.113742e-49 | -8.615850e-47 |
| Msa0838930 | Msa1014010 | 0.820249 | 7.578344e-53 | -8.615850e-47 |
| Msa0838930 | Msa1019000 | 0.801003 | 1.105386e-48 | -8.615850e-47 |
| Msa0838930 | Msa1022820 | 0.807034 | 6.156167e-50 | -8.615850e-47 |
| Msa0838930 | Msa1033780 | 0.814342 | 1.618099e-51 | -8.615850e-47 |
| Msa0838930 | Msa1035300 | 0.818223 | 2.192909e-52 | -8.615850e-47 |
| Msa0838930 | Msa1043420 | 0.812668 | 3.775038e-51 | -8.615850e-47 |
| Msa0838930 | Msa1043480 | 0.816141 | 6.444315e-52 | -8.615850e-47 |
| Msa0838930 | Msa1050740 | 0.826038 | 3.377766e-54 | -8.615850e-47 |
| Msa0838930 | Msa1068200 | -0.818759 | 1.657980e-52 | -8.615850e-47 |
| Msa0838930 | Msa1070840 | 0.827689 | 1.362001e-54 | -8.615850e-47 |
| Msa0838930 | Msa1075220 | -0.802191 | 6.307210e-49 | -8.615850e-47 |
| Msa0838930 | Msa1075390 | 0.827352 | 1.640795e-54 | -8.615850e-47 |
| Msa0838930 | Msa1080960 | 0.833080 | 6.549223e-56 | -8.615850e-47 |
| Msa0838930 | Msa1084260 | 0.859076 | 5.309378e-63 | -8.615850e-47 |
| Msa0838930 | Msa1093480 | 0.844792 | 6.071745e-59 | -8.615850e-47 |
| Msa0838930 | Msa1096060 | 0.837279 | 5.709028e-57 | -8.615850e-47 |
| Msa0838930 | Msa1098250 | 0.815105 | 1.096142e-51 | -8.615850e-47 |
| Msa0838930 | Msa1098270 | 0.837929 | 3.888351e-57 | -8.615850e-47 |
| Msa0838930 | Msa1098290 | 0.810358 | 1.199446e-50 | -8.615850e-47 |
| Msa0838930 | Msa1116440 | 0.802021 | 6.836673e-49 | -8.615850e-47 |
| Msa0838930 | Msa1116450 | 0.858506 | 7.859930e-63 | -8.615850e-47 |
| Msa0838930 | Msa1118760 | 0.855124 | 7.788292e-62 | -8.615850e-47 |
| Msa0838930 | Msa1138280 | 0.822687 | 2.072682e-53 | -8.615850e-47 |
| Msa0838930 | Msa1138320 | 0.817740 | 2.819684e-52 | -8.615850e-47 |
| Msa0838930 | Msa1139890 | 0.817375 | 3.407043e-52 | -8.615850e-47 |
| Msa0838930 | Msa1143020 | 0.836218 | 1.064137e-56 | -8.615850e-47 |
| Msa0838930 | Msa1147740 | 0.807930 | 3.972909e-50 | -8.615850e-47 |
| Msa0838930 | Msa1156340 | -0.807089 | 5.992916e-50 | -8.615850e-47 |
| Msa0838930 | Msa1158310 | 0.807969 | 3.899236e-50 | -8.615850e-47 |
| Msa0838930 | Msa1158660 | 0.840938 | 6.432605e-58 | -8.615850e-47 |
| Msa0838930 | Msa1162060 | 0.802469 | 5.529041e-49 | -8.615850e-47 |
| Msa0838930 | Msa1170800 | 0.806043 | 9.962667e-50 | -8.615850e-47 |
| Msa0838930 | Msa1186950 | -0.813963 | 1.961348e-51 | -8.615850e-47 |
| Msa0838930 | Msa1199070 | 0.800624 | 1.320618e-48 | -8.615850e-47 |
| Msa0838930 | Msa1205390 | 0.817213 | 3.705055e-52 | -8.615850e-47 |
| Msa0838930 | Msa1225200 | 0.824817 | 6.571154e-54 | -8.615850e-47 |
| Msa0838930 | Msa1229600 | 0.811427 | 7.038778e-51 | -8.615850e-47 |
| Msa0838930 | Msa1239720 | 0.813602 | 2.355986e-51 | -8.615850e-47 |
| Msa0838930 | Msa1241570 | 0.800540 | 1.373577e-48 | -8.615850e-47 |
| Msa0838930 | Msa1250290 | 0.802423 | 5.650964e-49 | -8.615850e-47 |
| Msa0838930 | Msa1255060 | 0.824442 | 8.051956e-54 | -8.615850e-47 |
| Msa0838930 | Msa1279420 | 0.815534 | 8.798705e-52 | -8.615850e-47 |
| Msa0838930 | Msa1282580 | -0.814497 | 1.495381e-51 | -8.615850e-47 |
| Msa0838930 | Msa1288450 | 0.839809 | 1.268753e-57 | -8.615850e-47 |
| Msa0838930 | Msa1291660 | 0.802513 | 5.414571e-49 | -8.615850e-47 |
| Msa0838930 | Msa1295510 | 0.819492 | 1.128825e-52 | -8.615850e-47 |
| Msa0838930 | Msa1297310 | 0.829907 | 3.957463e-55 | -8.615850e-47 |
| Msa0838930 | Msa1307210 | 0.805630 | 1.216529e-49 | -8.615850e-47 |
| Msa0838930 | Msa1319820 | 0.802366 | 5.805049e-49 | -8.615850e-47 |
| Msa0838930 | Msa1328290 | -0.809323 | 2.003118e-50 | -8.615850e-47 |
| Msa0838930 | Msa1343250 | 0.801286 | 9.673797e-49 | -8.615850e-47 |
| Msa0838930 | Msa1352540 | -0.810330 | 1.216453e-50 | -8.615850e-47 |
| Msa0838930 | Msa1359580 | 0.811243 | 7.716313e-51 | -8.615850e-47 |
| Msa0838930 | Msa1366300 | 0.824817 | 6.571154e-54 | -8.615850e-47 |
| Msa0838930 | Msa1368430 | 0.805111 | 1.562785e-49 | -8.615850e-47 |
| Msa0838930 | Msa1372150 | 0.834998 | 2.166320e-56 | -8.615850e-47 |
| Msa0838930 | Msa1376890 | 0.806477 | 8.071886e-50 | -8.615850e-47 |
| Msa0838930 | Msa1378940 | 0.810804 | 9.604819e-51 | -8.615850e-47 |
| Msa0838930 | Msa1379850 | 0.893649 | 5.162368e-75 | -8.615850e-47 |
| Msa0838930 | Msa1382680 | 0.830349 | 3.086972e-55 | -8.615850e-47 |
| Msa0838930 | Msa1385020 | 0.827628 | 1.408794e-54 | -8.615850e-47 |
| Msa0838930 | Msa1393410 | 0.812624 | 3.861169e-51 | -8.615850e-47 |
| Msa0838930 | Msa1398890 | 0.823359 | 1.445265e-53 | -8.615850e-47 |
| Msa0838930 | Msa1401270 | 0.835730 | 1.415165e-56 | -8.615850e-47 |
| Msa0838930 | Msa1403650 | 0.803459 | 3.451870e-49 | -8.615850e-47 |
| Msa0838930 | Msa1408180 | 0.810797 | 9.641373e-51 | -8.615850e-47 |
| Msa0838930 | Msa1408620 | -0.816816 | 4.548974e-52 | -8.615850e-47 |
| Msa0838930 | Msa1410210 | 0.804140 | 2.491530e-49 | -8.615850e-47 |
| Msa0838930 | Msa1424630 | 0.808376 | 3.193559e-50 | -8.615850e-47 |
| Msa0838930 | Msa1430550 | 0.805955 | 1.039410e-49 | -8.615850e-47 |
| Msa0838930 | Msa1433220 | 0.833830 | 4.256978e-56 | -8.615850e-47 |
| Msa0838930 | Msa1435420 | 0.814766 | 1.303654e-51 | -8.615850e-47 |
| Msa0838930 | Msa1440740 | 0.833189 | 6.152786e-56 | -8.615850e-47 |
| Msa0838930 | Msa1447150 | 0.811718 | 6.084971e-51 | -8.615850e-47 |
| Msa0838930 | Msa1448980 | 0.813195 | 2.894105e-51 | -8.615850e-47 |
| Msa0838930 | Msa1459050 | 0.802528 | 5.374259e-49 | -8.615850e-47 |
| Msa0133980 | Msa0838930 | -0.803937 | 2.746134e-49 | -8.615850e-47 |
| Msa0142460 | Msa0838930 | 0.816456 | 5.477508e-52 | -8.615850e-47 |
| Msa0145110 | Msa0838930 | 0.821312 | 4.316911e-53 | -8.615850e-47 |
| Msa0169820 | Msa0838930 | 0.813592 | 2.368043e-51 | -8.615850e-47 |
| Msa0170140 | Msa0838930 | 0.845787 | 3.266841e-59 | -8.615850e-47 |
| Msa0178510 | Msa0838930 | 0.837930 | 3.885594e-57 | -8.615850e-47 |
| Msa0187030 | Msa0838930 | 0.831826 | 1.339301e-55 | -8.615850e-47 |
| Msa0187830 | Msa0838930 | 0.817619 | 3.001438e-52 | -8.615850e-47 |
| Msa0190530 | Msa0838930 | 0.808720 | 2.696306e-50 | -8.615850e-47 |
| Msa0191890 | Msa0838930 | 0.836499 | 9.030730e-57 | -8.615850e-47 |
| Msa0193540 | Msa0838930 | 0.849672 | 2.782329e-60 | -8.615850e-47 |
| Msa0198560 | Msa0838930 | 0.812933 | 3.303876e-51 | -8.615850e-47 |
| Msa0200560 | Msa0838930 | 0.801700 | 7.954879e-49 | -8.615850e-47 |
| Msa0204840 | Msa0838930 | 0.823692 | 1.207649e-53 | -8.615850e-47 |
| Msa0210450 | Msa0838930 | 0.810220 | 1.284239e-50 | -8.615850e-47 |
| Msa0220290 | Msa0838930 | -0.812032 | 5.199587e-51 | -8.615850e-47 |
| Msa0223410 | Msa0838930 | -0.801515 | 8.684212e-49 | -8.615850e-47 |
| Msa0226180 | Msa0838930 | 0.813634 | 2.317219e-51 | -8.615850e-47 |
| Msa0230370 | Msa0838930 | 0.800645 | 1.308025e-48 | -8.615850e-47 |
| Msa0376590 | Msa0838930 | 0.851813 | 6.948847e-61 | -8.615850e-47 |
| Msa0379710 | Msa0838930 | 0.824233 | 9.016909e-54 | -8.615850e-47 |
| Msa0381610 | Msa0838930 | -0.801324 | 9.502072e-49 | -8.615850e-47 |
| Msa0422180 | Msa0838930 | 0.833733 | 4.501373e-56 | -8.615850e-47 |
| Msa0422280 | Msa0838930 | 0.815582 | 8.588850e-52 | -8.615850e-47 |
| Msa0424990 | Msa0838930 | 0.808424 | 3.118998e-50 | -8.615850e-47 |
| Msa0429090 | Msa0838930 | 0.850113 | 2.093932e-60 | -8.615850e-47 |
| Msa0432670 | Msa0838930 | 0.809723 | 1.643484e-50 | -8.615850e-47 |
| Msa0436370 | Msa0838930 | 0.894404 | 2.546946e-75 | -8.615850e-47 |
| Msa0448550 | Msa0838930 | -0.806616 | 7.544123e-50 | -8.615850e-47 |
| Msa0468800 | Msa0838930 | 0.823758 | 1.165740e-53 | -8.615850e-47 |
| Msa0469940 | Msa0838930 | -0.808253 | 3.392003e-50 | -8.615850e-47 |
| Msa0475500 | Msa0838930 | 0.843377 | 1.455098e-58 | -8.615850e-47 |
| Msa0241190 | Msa0838930 | 0.804247 | 2.367673e-49 | -8.615850e-47 |
| Msa0243250 | Msa0838930 | 0.806110 | 9.642652e-50 | -8.615850e-47 |
| Msa0245940 | Msa0838930 | 0.802750 | 4.837169e-49 | -8.615850e-47 |
| Msa0259500 | Msa0838930 | 0.800109 | 1.681328e-48 | -8.615850e-47 |
| Msa0264780 | Msa0838930 | 0.830666 | 2.582493e-55 | -8.615850e-47 |
| Msa0269560 | Msa0838930 | 0.803913 | 2.778598e-49 | -8.615850e-47 |
| Msa0274630 | Msa0838930 | 0.837062 | 6.488200e-57 | -8.615850e-47 |
| Msa0274670 | Msa0838930 | 0.803195 | 3.913548e-49 | -8.615850e-47 |
| Msa0281640 | Msa0838930 | 0.800214 | 1.601066e-48 | -8.615850e-47 |
| Msa0284520 | Msa0838930 | 0.819877 | 9.220667e-53 | -8.615850e-47 |
| Msa0312530 | Msa0838930 | 0.822431 | 2.377199e-53 | -8.615850e-47 |
| Msa0314060 | Msa0838930 | 0.842186 | 3.015965e-58 | -8.615850e-47 |
| Msa0338110 | Msa0838930 | 0.804025 | 2.632878e-49 | -8.615850e-47 |
| Msa0338730 | Msa0838930 | -0.801064 | 1.074059e-48 | -8.615850e-47 |
| Msa0341540 | Msa0838930 | 0.811825 | 5.768147e-51 | -8.615850e-47 |
| Msa0342070 | Msa0838930 | 0.847202 | 1.342790e-59 | -8.615850e-47 |
| Msa0344690 | Msa0838930 | -0.806989 | 6.292552e-50 | -8.615850e-47 |
| Msa0356890 | Msa0838930 | -0.803893 | 2.804673e-49 | -8.615850e-47 |
| Msa0484780 | Msa0838930 | 0.807787 | 4.262127e-50 | -8.615850e-47 |
| Msa0514610 | Msa0838930 | 0.802674 | 5.015527e-49 | -8.615850e-47 |
| Msa0516370 | Msa0838930 | 0.857347 | 1.737047e-62 | -8.615850e-47 |
| Msa0525610 | Msa0838930 | 0.801769 | 7.700042e-49 | -8.615850e-47 |
| Msa0526100 | Msa0838930 | -0.815772 | 7.790441e-52 | -8.615850e-47 |
| Msa0534880 | Msa0838930 | 0.804618 | 1.981419e-49 | -8.615850e-47 |
| Msa0559500 | Msa0838930 | 0.837602 | 4.717639e-57 | -8.615850e-47 |
| Msa0567020 | Msa0838930 | 0.802251 | 6.129091e-49 | -8.615850e-47 |
| Msa0572420 | Msa0838930 | 0.874185 | 8.228656e-68 | -8.615850e-47 |
| Msa0572480 | Msa0838930 | 0.899089 | 2.796571e-77 | -8.615850e-47 |
| Msa0574760 | Msa0838930 | -0.831355 | 1.749599e-55 | -8.615850e-47 |
| Msa0579660 | Msa0838930 | 0.817552 | 3.107853e-52 | -8.615850e-47 |
| Msa0581050 | Msa0838930 | 0.836787 | 7.626346e-57 | -8.615850e-47 |
| Msa0598160 | Msa0838930 | 0.800108 | 1.681895e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838930 | MtrunA17_Chr5g0407081 | 96.340 | 847 | 29 | 2 | 1 | 846 | 1 | 846 | 0.0 | 1670 |
| Msa0838930 | MtrunA17_Chr5g0408021 | 86.667 | 105 | 14 | 0 | 453 | 557 | 5 | 109 | 1.94e-52 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838930 | AT2G17550.1 | 40.956 | 879 | 380 | 31 | 1 | 845 | 1 | 774 | 9.62e-166 | 501 |
| Msa0838930 | AT2G17550.2 | 41.242 | 805 | 335 | 30 | 74 | 845 | 1 | 700 | 2.92e-150 | 458 |
Find 174 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTATTCACTTGATAATT+TGG | 0.153873 | 5_4:+13519248 | Msa0838930:CDS |
| ATTCAGACTCAGACGGTTTC+TGG | 0.172392 | 5_4:-13518825 | None:intergenic |
| AACATGCACAATTTGGATTT+AGG | 0.175010 | 5_4:+13519750 | Msa0838930:three_prime_UTR |
| CTGGTTTATACTTTGGTTCT+TGG | 0.181940 | 5_4:+13518902 | Msa0838930:CDS |
| TGATAAGAACATGCACAATT+TGG | 0.184929 | 5_4:+13519743 | Msa0838930:three_prime_UTR |
| TACATGATCATTACACAAAT+TGG | 0.220293 | 5_4:+13519464 | Msa0838930:three_prime_UTR |
| TAAAAGAATAAGTGAAAATA+TGG | 0.225343 | 5_4:+13516628 | Msa0838930:CDS |
| GAATCACTTTCAGTTGTTCT+TGG | 0.245622 | 5_4:+13519090 | Msa0838930:CDS |
| GTTATAAGATTTGATCATTA+AGG | 0.248170 | 5_4:-13517044 | None:intergenic |
| ACATGCACAATTTGGATTTA+GGG | 0.279472 | 5_4:+13519751 | Msa0838930:three_prime_UTR |
| AGGAACTGTTGAAGTTAGTA+TGG | 0.285855 | 5_4:+13519184 | Msa0838930:CDS |
| TTTGTGAGCATGGACTTTCT+TGG | 0.293337 | 5_4:-13515616 | None:intergenic |
| AGAGATTTACTTGTTGCTTC+TGG | 0.294038 | 5_4:+13518883 | Msa0838930:CDS |
| TGGAATAAGTCTTTGTTAAG+AGG | 0.301570 | 5_4:+13518922 | Msa0838930:CDS |
| TGAATCTCTACTGATAAATT+CGG | 0.305013 | 5_4:-13517443 | None:intergenic |
| AAAATCATCATACCAATAAA+TGG | 0.305159 | 5_4:-13514810 | None:intergenic |
| AAATACAAACAGGATCTTTC+AGG | 0.313229 | 5_4:+13517608 | Msa0838930:CDS |
| AGCAAAACTGTATCTCAAAT+TGG | 0.317168 | 5_4:-13517869 | None:intergenic |
| GCTAGAAACACTGCCGATTT+CGG | 0.329590 | 5_4:-13516903 | None:intergenic |
| GAAATGAGTCGAATTCATTA+TGG | 0.333811 | 5_4:-13516727 | None:intergenic |
| GCAGTGTTCATGAAGACTTT+TGG | 0.334930 | 5_4:+13518449 | Msa0838930:CDS |
| GATGGATGGAGCCAGAGTTT+TGG | 0.337357 | 5_4:+13516776 | Msa0838930:CDS |
| CAATGAAGAGATCAATATAT+TGG | 0.342843 | 5_4:+13519311 | Msa0838930:CDS |
| CTTACAGGTAATTCTCCTTC+TGG | 0.343654 | 5_4:-13515950 | None:intergenic |
| TGAATATCTTGTAGCATTGT+AGG | 0.346382 | 5_4:+13515451 | Msa0838930:intron |
| TCTGAAAATAATCGTTATTC+AGG | 0.352379 | 5_4:+13516467 | Msa0838930:CDS |
| TGTGTGAGTGTGTGTGATGT+AGG | 0.353846 | 5_4:+13519561 | Msa0838930:three_prime_UTR |
| CATGAGTGAAGTGAATAATT+AGG | 0.357648 | 5_4:+13519614 | Msa0838930:three_prime_UTR |
| ATATCAAGCAGCAAGGTTTC+AGG | 0.359927 | 5_4:+13516865 | Msa0838930:CDS |
| GACATCAGCTCTGGTTTAAC+TGG | 0.360505 | 5_4:+13518553 | Msa0838930:CDS |
| GCTACAAAACTATATCAATT+AGG | 0.361532 | 5_4:-13519497 | None:intergenic |
| AGGAACAGGCTACGAGGTTA+AGG | 0.366082 | 5_4:-13514529 | None:intergenic |
| TTGAGGACATGAGAGTCTTT+TGG | 0.374336 | 5_4:+13515539 | Msa0838930:five_prime_UTR |
| AAGCCTTGTGGCGAGGTTGA+TGG | 0.376575 | 5_4:+13516559 | Msa0838930:CDS |
| CTTAGAGTTCTGCTCTTTGA+AGG | 0.378221 | 5_4:-13517004 | None:intergenic |
| AGCCTTGTGGCGAGGTTGAT+GGG | 0.378689 | 5_4:+13516560 | Msa0838930:CDS |
| TCAAGATCAGGAACATCATT+TGG | 0.380795 | 5_4:+13517712 | Msa0838930:CDS |
| ATGGAAGGAGTTCAGTTAGT+TGG | 0.381437 | 5_4:+13516678 | Msa0838930:CDS |
| TGTTCAAAGTTTGCCGAAAT+CGG | 0.382797 | 5_4:+13516890 | Msa0838930:CDS |
| GTTGCTTCTGGTTTATACTT+TGG | 0.384654 | 5_4:+13518895 | Msa0838930:CDS |
| TATTCAATCATGAAGAGAAT+TGG | 0.394633 | 5_4:+13517125 | Msa0838930:CDS |
| GATACATATGCAAAGCCTAT+TGG | 0.399418 | 5_4:+13518946 | Msa0838930:CDS |
| GAATCTCTACTGATAAATTC+GGG | 0.401716 | 5_4:-13517442 | None:intergenic |
| GAGAATTGGACTAGTTCAAC+AGG | 0.404604 | 5_4:+13517139 | Msa0838930:CDS |
| TTGAGTTCAATCCCTTGGTC+TGG | 0.405396 | 5_4:+13519282 | Msa0838930:CDS |
| TCGGGAACATCCACAGGAAA+TGG | 0.408972 | 5_4:+13516811 | Msa0838930:CDS |
| AACATTTGAGTTCAATCCCT+TGG | 0.418429 | 5_4:+13519277 | Msa0838930:CDS |
| TGGAAGGAGTTCAGTTAGTT+GGG | 0.424198 | 5_4:+13516679 | Msa0838930:CDS |
| ATCAACCTCGCCACAAGGCT+TGG | 0.428948 | 5_4:-13516557 | None:intergenic |
| TCGTCTCTTGAGGACAAATC+AGG | 0.438083 | 5_4:-13518505 | None:intergenic |
| ACCCTTGCTCCACCAATGTA+TGG | 0.439738 | 5_4:-13519439 | None:intergenic |
| GACAAATCAGGAGTTGATAC+TGG | 0.442829 | 5_4:-13518493 | None:intergenic |
| GTGTGAGTGTGTGTGATGTA+GGG | 0.445746 | 5_4:+13519562 | Msa0838930:three_prime_UTR |
| GATGTTCCTGATCTTGATAC+AGG | 0.455850 | 5_4:-13517706 | None:intergenic |
| CAACCGCTTCAAGCTTCCTC+CGG | 0.459478 | 5_4:-13517780 | None:intergenic |
| AATGATAATGACAGAGGAAC+AGG | 0.459544 | 5_4:-13514543 | None:intergenic |
| AAGGATCTTACAAGGTTCCT+TGG | 0.460932 | 5_4:-13517676 | None:intergenic |
| GATCAATATATTGGAAAGAG+AGG | 0.461233 | 5_4:+13519320 | Msa0838930:CDS |
| AAAAGAATAAGTGAAAATAT+GGG | 0.462177 | 5_4:+13516629 | Msa0838930:CDS |
| TCATGATTGAATATGCAATC+AGG | 0.468328 | 5_4:-13517115 | None:intergenic |
| CTGATAAATTCGGGGACACT+TGG | 0.469625 | 5_4:-13517433 | None:intergenic |
| TTTGAAATGTGCAGATGAAT+GGG | 0.480380 | 5_4:+13517564 | Msa0838930:CDS |
| GAAGAAACAGAAATACAAAC+AGG | 0.481676 | 5_4:+13517598 | Msa0838930:CDS |
| AATAATCGTTATTCAGGCGC+TGG | 0.481780 | 5_4:+13516473 | Msa0838930:CDS |
| TCTGCTCCTGTATCAAGATC+AGG | 0.482542 | 5_4:+13517700 | Msa0838930:CDS |
| ATTTGACGAGCAATAAGCTT+AGG | 0.486795 | 5_4:-13517310 | None:intergenic |
| GGAATAAGTCTTTGTTAAGA+GGG | 0.490427 | 5_4:+13518923 | Msa0838930:CDS |
| CTTGTGATGTCTCTCATTGT+CGG | 0.490601 | 5_4:-13517958 | None:intergenic |
| GGAACAGGCTACGAGGTTAA+GGG | 0.490615 | 5_4:-13514528 | None:intergenic |
| AATTTATCAGTAGAGATTCA+AGG | 0.492213 | 5_4:+13517446 | Msa0838930:CDS |
| AGTTCAACAGGGACTTTACC+AGG | 0.494157 | 5_4:+13517151 | Msa0838930:CDS |
| CTACAAAGAAAAGTTAGAAC+GGG | 0.495839 | 5_4:+13515481 | Msa0838930:five_prime_UTR |
| GAAACCGTCTGAGTCTGAAT+TGG | 0.496615 | 5_4:+13518828 | Msa0838930:CDS |
| TCTCTTATGTAAGATTCTGC+TGG | 0.500088 | 5_4:-13518865 | None:intergenic |
| TTCCATACATTGGTGGAGCA+AGG | 0.501510 | 5_4:+13519437 | Msa0838930:three_prime_UTR |
| CAGGTTTCAAGATAACGATC+CGG | 0.509636 | 5_4:-13517090 | None:intergenic |
| CTGCCATGTGCTTGATCGAT+TGG | 0.510292 | 5_4:-13516528 | None:intergenic |
| CTTCCTCCGGATATGAGCCC+CGG | 0.510820 | 5_4:-13517767 | None:intergenic |
| GCCTTTGTTCTCCAAAACTC+TGG | 0.512265 | 5_4:-13516787 | None:intergenic |
| GCAACAGGTTTAGTGTCTAC+AGG | 0.513735 | 5_4:-13516596 | None:intergenic |
| AGGTTTCAAGATAACGATCC+GGG | 0.519687 | 5_4:-13517089 | None:intergenic |
| TCCATGTTGTCGCCGCCTCA+AGG | 0.519717 | 5_4:+13519159 | Msa0838930:CDS |
| AACAGTTCCTTTCCTTGAGG+CGG | 0.522924 | 5_4:-13519171 | None:intergenic |
| GAATGATGAAAATTCTATGA+AGG | 0.523675 | 5_4:+13519017 | Msa0838930:CDS |
| TTCTGAAGTTCCATTTCCTG+TGG | 0.524225 | 5_4:-13516821 | None:intergenic |
| TGAGCAGACTGAATTTGAGT+TGG | 0.524933 | 5_4:-13517368 | None:intergenic |
| TGGTAAGAGAAATCAATCAA+TGG | 0.527992 | 5_4:+13517909 | Msa0838930:CDS |
| ACACTGCTGCACACAGATGC+AGG | 0.529299 | 5_4:-13518433 | None:intergenic |
| CGGATCGTTATCTTGAAACC+TGG | 0.530582 | 5_4:+13517091 | Msa0838930:CDS |
| ATGTGGGTGTTGTTGAAAAG+TGG | 0.530723 | 5_4:-13514721 | None:intergenic |
| TGAATTCAATCAAGGGAGGA+TGG | 0.531417 | 5_4:+13515593 | Msa0838930:CDS |
| TTGAATATGCAATCAGGACC+AGG | 0.536062 | 5_4:-13517109 | None:intergenic |
| TTGTTGATTTGGCAGAGCTA+AGG | 0.541285 | 5_4:+13518752 | Msa0838930:intron |
| CACAGCAGTCTCGTCTCTTG+AGG | 0.541373 | 5_4:-13518515 | None:intergenic |
| GAAAGCTTCTACTAGAGGAC+CGG | 0.541402 | 5_4:+13517734 | Msa0838930:CDS |
| ATTATCAAGTAGAAGAAGAC+TGG | 0.542682 | 5_4:+13516444 | Msa0838930:CDS |
| GAATATCTTGTAGCATTGTA+GGG | 0.545861 | 5_4:+13515452 | Msa0838930:intron |
| CTGCACACAGATGCAGGACT+CGG | 0.548951 | 5_4:-13518427 | None:intergenic |
| AGAGAATCGAAACAACGAAA+AGG | 0.551559 | 5_4:+13516940 | Msa0838930:CDS |
| CTGAATCTAGACAGTGTCAA+AGG | 0.551664 | 5_4:-13519117 | None:intergenic |
| AGTGAATAAAGAGACATATC+CGG | 0.556492 | 5_4:-13519237 | None:intergenic |
| TTTCACAAAGTTAAAGATGA+CGG | 0.556814 | 5_4:+13516746 | Msa0838930:CDS |
| AAGGCGTCGGGAACATCCAC+AGG | 0.557978 | 5_4:+13516805 | Msa0838930:CDS |
| TTCAAGATAACGATCCGGGT+TGG | 0.558627 | 5_4:-13517085 | None:intergenic |
| AAAGATGACGGCGATGATGA+TGG | 0.560500 | 5_4:+13516758 | Msa0838930:CDS |
| TCCATACATTGGTGGAGCAA+GGG | 0.560515 | 5_4:+13519438 | Msa0838930:three_prime_UTR |
| TGATTGAGAAAATAGTTATG+TGG | 0.562809 | 5_4:-13514738 | None:intergenic |
| GTGTCTCAATATCACTTCCT+CGG | 0.563040 | 5_4:-13517264 | None:intergenic |
| CATTGATTATTCCAGACCAA+GGG | 0.564059 | 5_4:-13519293 | None:intergenic |
| GCCTTGTGGCGAGGTTGATG+GGG | 0.564771 | 5_4:+13516561 | Msa0838930:CDS |
| TGTGAGTGTGTGTGATGTAG+GGG | 0.567641 | 5_4:+13519563 | Msa0838930:three_prime_UTR |
| GCAATAAGCTTAGGATCAGA+TGG | 0.568354 | 5_4:-13517301 | None:intergenic |
| ACAAATCAAGCAAAATCTTG+TGG | 0.568803 | 5_4:-13519062 | None:intergenic |
| GTTGTCGCCGCCTCAAGGAA+AGG | 0.569359 | 5_4:+13519164 | Msa0838930:CDS |
| ACAGAGAGTTGTTGTCTCCA+AGG | 0.575318 | 5_4:+13517659 | Msa0838930:CDS |
| ACACATGGAAGATGAAATTG+AGG | 0.575323 | 5_4:+13515522 | Msa0838930:five_prime_UTR |
| TGTTTCGTTATATCCTTCAC+CGG | 0.577070 | 5_4:+13519218 | Msa0838930:CDS |
| CCGTCGTTCATAAGAACTGT+TGG | 0.578230 | 5_4:-13517985 | None:intergenic |
| GGAACTGTTGAAGTTAGTAT+GGG | 0.578282 | 5_4:+13519185 | Msa0838930:CDS |
| GAGCCCCGGTTAAAATGTGC+CGG | 0.579772 | 5_4:-13517753 | None:intergenic |
| ACTACAAAGAAAAGTTAGAA+CGG | 0.581662 | 5_4:+13515480 | Msa0838930:five_prime_UTR |
| TCATTGATTATTCCAGACCA+AGG | 0.588363 | 5_4:-13519294 | None:intergenic |
| TCCTTGAGGCGGCGACAACA+TGG | 0.589447 | 5_4:-13519160 | None:intergenic |
| TCTTCTATACTATGTCTACC+TGG | 0.595004 | 5_4:-13517169 | None:intergenic |
| TGATGTCTCTCATTGTCGGA+CGG | 0.595229 | 5_4:-13517954 | None:intergenic |
| TAAAGAGTTCCATACATTGG+TGG | 0.596732 | 5_4:+13519430 | Msa0838930:three_prime_UTR |
| ATTTGGAAAGCTTCTACTAG+AGG | 0.598028 | 5_4:+13517729 | Msa0838930:CDS |
| TAAAGAGACATATCCGGTGA+AGG | 0.598715 | 5_4:-13519231 | None:intergenic |
| GTTGAAACATCTCAGAAGTA+CGG | 0.598762 | 5_4:+13515926 | Msa0838930:CDS |
| AATTCTAGTGGAGTGACACA+TGG | 0.599477 | 5_4:+13515507 | Msa0838930:five_prime_UTR |
| CAAACAAGGGAACAAATGGA+AGG | 0.600461 | 5_4:+13516663 | Msa0838930:CDS |
| ACCCCATCAACCTCGCCACA+AGG | 0.600954 | 5_4:-13516562 | None:intergenic |
| CAATCAATGGTAGAATCACA+TGG | 0.601271 | 5_4:+13517922 | Msa0838930:CDS |
| TCTTGATACAGGAGCAGACA+AGG | 0.604956 | 5_4:-13517695 | None:intergenic |
| GATTGAGAAAATAGTTATGT+GGG | 0.606247 | 5_4:-13514737 | None:intergenic |
| TCTCAGAAGTACGGTCCAGA+AGG | 0.606677 | 5_4:+13515935 | Msa0838930:CDS |
| AAAGAATAAGTGAAAATATG+GGG | 0.610226 | 5_4:+13516630 | Msa0838930:CDS |
| TTCAACAGTTCCTTTCCTTG+AGG | 0.611963 | 5_4:-13519174 | None:intergenic |
| TTGAAGCATATCAAGCAGCA+AGG | 0.612487 | 5_4:+13516858 | Msa0838930:CDS |
| GGAAAAGGTTATGCGGTCCG+AGG | 0.614051 | 5_4:+13517247 | Msa0838930:CDS |
| CACATAATACAAGTATGCAA+AGG | 0.618748 | 5_4:+13516972 | Msa0838930:CDS |
| ATGACGGCGATGATGATGGA+TGG | 0.620775 | 5_4:+13516762 | Msa0838930:CDS |
| CTGCACCAAGCCTTGTGGCG+AGG | 0.620894 | 5_4:+13516552 | Msa0838930:CDS |
| CAATAAAGAGTTCCATACAT+TGG | 0.622061 | 5_4:+13519427 | Msa0838930:three_prime_UTR |
| CTGATGTCTCTGAAAACTTG+TGG | 0.622401 | 5_4:-13518538 | None:intergenic |
| TGCACCAATTCAGACTCAGA+CGG | 0.623432 | 5_4:-13518832 | None:intergenic |
| GAATAAGTCTTTGTTAAGAG+GGG | 0.627428 | 5_4:+13518924 | Msa0838930:CDS |
| GTGAGTGTGTGTGATGTAGG+GGG | 0.628186 | 5_4:+13519564 | Msa0838930:three_prime_UTR |
| ACTTGATTCTAGTGATGTCG+AGG | 0.630630 | 5_4:+13518789 | Msa0838930:CDS |
| ACAAGATCATACGAAGGTGA+AGG | 0.634923 | 5_4:+13517397 | Msa0838930:CDS |
| TATCCAATCGATCAAGCACA+TGG | 0.637814 | 5_4:+13516525 | Msa0838930:CDS |
| TAGAACGGGCGTAATTCTAG+TGG | 0.640075 | 5_4:+13515495 | Msa0838930:five_prime_UTR |
| GAGCAGACAAGGATCTTACA+AGG | 0.642350 | 5_4:-13517684 | None:intergenic |
| AACTGTCGGAAAAGGTTATG+CGG | 0.647191 | 5_4:+13517240 | Msa0838930:CDS |
| TAACCGGGGCTCATATCCGG+AGG | 0.647535 | 5_4:+13517764 | Msa0838930:CDS |
| TTGGAGACAACAACTCTCTG+TGG | 0.648215 | 5_4:-13517657 | None:intergenic |
| TAGATGCATCTTCTCCAACC+CGG | 0.653096 | 5_4:+13517071 | Msa0838930:CDS |
| ACAATGAGAGACATCACAAG+TGG | 0.658345 | 5_4:+13517961 | Msa0838930:CDS |
| GCTCACAAAAGACATCATAG+TGG | 0.659606 | 5_4:+13515630 | Msa0838930:CDS |
| TCTTGTTGAAGAACTCACAA+AGG | 0.659944 | 5_4:+13519365 | Msa0838930:CDS |
| GCAGACTGCACCAAGCCTTG+TGG | 0.667683 | 5_4:+13516547 | Msa0838930:CDS |
| AATCTAGACAGTGTCAAAGG+TGG | 0.669822 | 5_4:-13519114 | None:intergenic |
| TATCCGGAGGAAGCTTGAAG+CGG | 0.676693 | 5_4:+13517777 | Msa0838930:CDS |
| CGTTTGAAATGCGAACTGCA+AGG | 0.679951 | 5_4:+13517214 | Msa0838930:CDS |
| GTGACTAATGATAATGACAG+AGG | 0.684571 | 5_4:-13514549 | None:intergenic |
| AATCTCTACTGATAAATTCG+GGG | 0.689534 | 5_4:-13517441 | None:intergenic |
| CACACAGATGCAGGACTCGG+AGG | 0.714130 | 5_4:-13518424 | None:intergenic |
| CCAACAGTTCTTATGAACGA+CGG | 0.720547 | 5_4:+13517985 | Msa0838930:CDS |
| GAATCAACAAGATCATACGA+AGG | 0.725807 | 5_4:+13517391 | Msa0838930:CDS |
| GTGAAGGATATAACGAAACA+CGG | 0.727910 | 5_4:-13519215 | None:intergenic |
| ACAGTTCTTATGAACGACGG+TGG | 0.731871 | 5_4:+13517988 | Msa0838930:CDS |
| TGACAGAGGAACAGGCTACG+AGG | 0.744006 | 5_4:-13514535 | None:intergenic |
| AGAATTGGACTAGTTCAACA+GGG | 0.749710 | 5_4:+13517140 | Msa0838930:CDS |
| TCTTTAGGAGAACTACACTG+AGG | 0.805453 | 5_4:+13518399 | Msa0838930:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGAATAAGTGAAAATA+TGG | + | chr5_4:13516628-13516647 | Msa0838930:CDS | 15.0% |
| !! | AAAAGAATAAGTGAAAATAT+GGG | + | chr5_4:13516629-13516648 | Msa0838930:CDS | 15.0% |
| !! | AACAAGATAATAAAAAATCA+AGG | + | chr5_4:13518188-13518207 | Msa0838930:intron | 15.0% |
| !! | ACAAGATAATAAAAAATCAA+GGG | + | chr5_4:13518189-13518208 | Msa0838930:intron | 15.0% |
| !!! | TTCAAAAAGTCTTCTTTTTT+TGG | + | chr5_4:13514604-13514623 | Msa0838930:five_prime_UTR | 20.0% |
| !!! | TCAAAAAGTCTTCTTTTTTT+GGG | + | chr5_4:13514605-13514624 | Msa0838930:five_prime_UTR | 20.0% |
| !! | AAAATCATCATACCAATAAA+TGG | - | chr5_4:13514813-13514832 | None:intergenic | 20.0% |
| !! | TTCAAAAGCTTATTTGATAT+TGG | + | chr5_4:13515134-13515153 | Msa0838930:intron | 20.0% |
| !!! | ACTTTTTTGAATTCAATCAA+GGG | + | chr5_4:13515586-13515605 | Msa0838930:CDS | 20.0% |
| !! | TTCGTATAAAAACAATATGA+TGG | - | chr5_4:13516012-13516031 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAATATTCTAAA+AGG | - | chr5_4:13516192-13516211 | None:intergenic | 20.0% |
| !! | ACTAAATTCAATTCAACAAA+TGG | - | chr5_4:13516403-13516422 | None:intergenic | 20.0% |
| !! | AAAGAATAAGTGAAAATATG+GGG | + | chr5_4:13516630-13516649 | Msa0838930:CDS | 20.0% |
| !! | GTTATAAGATTTGATCATTA+AGG | - | chr5_4:13517047-13517066 | None:intergenic | 20.0% |
| !!! | TCTTAGCTTTATATTTATTG+TGG | + | chr5_4:13518149-13518168 | Msa0838930:intron | 20.0% |
| !!! | TCTTTATTCACTTGATAATT+TGG | + | chr5_4:13519248-13519267 | Msa0838930:CDS | 20.0% |
| ! | CTTTGTGAAAAAATGGAAAT+GGG | - | chr5_4:13514689-13514708 | None:intergenic | 25.0% |
| ! | ACTTTGTGAAAAAATGGAAA+TGG | - | chr5_4:13514690-13514709 | None:intergenic | 25.0% |
| ! | CTTCAAACTTTGTGAAAAAA+TGG | - | chr5_4:13514696-13514715 | None:intergenic | 25.0% |
| ! | GATTGAGAAAATAGTTATGT+GGG | - | chr5_4:13514740-13514759 | None:intergenic | 25.0% |
| ! | TGATTGAGAAAATAGTTATG+TGG | - | chr5_4:13514741-13514760 | None:intergenic | 25.0% |
| !! | TGAATTTTCTCACCATTTAT+TGG | + | chr5_4:13514798-13514817 | Msa0838930:five_prime_UTR | 25.0% |
| !!! | TTTTTTCTTTTGTGTGTGTT+TGG | + | chr5_4:13514830-13514849 | Msa0838930:intron | 25.0% |
| ! | TTGTTGTCAAAGTTATGATT+TGG | + | chr5_4:13514934-13514953 | Msa0838930:intron | 25.0% |
| ! | TCAACTGAAAACAAGAAATT+GGG | - | chr5_4:13515098-13515117 | None:intergenic | 25.0% |
| ! | CTTATTTGATATTGGAAGAT+TGG | + | chr5_4:13515142-13515161 | Msa0838930:intron | 25.0% |
| !!! | AGTTAGTTGTTTCTATTGAT+TGG | + | chr5_4:13515176-13515195 | Msa0838930:intron | 25.0% |
| ! | TTGTTATGTATTTGTCCTTA+AGG | + | chr5_4:13515231-13515250 | Msa0838930:intron | 25.0% |
| ! | ATGTAAGATTCCTTTATAGA+TGG | - | chr5_4:13515269-13515288 | None:intergenic | 25.0% |
| ! | AAATTTGAAGAAAGATGTGT+TGG | + | chr5_4:13515379-13515398 | Msa0838930:intron | 25.0% |
| ! | ACTACAAAGAAAAGTTAGAA+CGG | + | chr5_4:13515480-13515499 | Msa0838930:five_prime_UTR | 25.0% |
| !!! | CACTTTTTTGAATTCAATCA+AGG | + | chr5_4:13515585-13515604 | Msa0838930:CDS | 25.0% |
| ! | TACTAAAAACAATCAAGCAA+AGG | - | chr5_4:13515836-13515855 | None:intergenic | 25.0% |
| ! | CATATCGAACATAATTACAA+CGG | - | chr5_4:13516167-13516186 | None:intergenic | 25.0% |
| ! | CAAGAACTATGGTTTATATT+TGG | - | chr5_4:13516357-13516376 | None:intergenic | 25.0% |
| ! | TCTGAAAATAATCGTTATTC+AGG | + | chr5_4:13516467-13516486 | Msa0838930:CDS | 25.0% |
| !! | TCACTTATTCTTTTATCTGA+TGG | - | chr5_4:13516623-13516642 | None:intergenic | 25.0% |
| ! | TTTCACAAAGTTAAAGATGA+CGG | + | chr5_4:13516746-13516765 | Msa0838930:CDS | 25.0% |
| ! | TATTCAATCATGAAGAGAAT+TGG | + | chr5_4:13517125-13517144 | Msa0838930:CDS | 25.0% |
| !! | TAGTATAGAAGATTTTCTTG+AGG | + | chr5_4:13517180-13517199 | Msa0838930:CDS | 25.0% |
| ! | TGAATCTCTACTGATAAATT+CGG | - | chr5_4:13517446-13517465 | None:intergenic | 25.0% |
| ! | AATTTATCAGTAGAGATTCA+AGG | + | chr5_4:13517446-13517465 | Msa0838930:CDS | 25.0% |
| !!! | TAGCTTTATATTTATTGTGG+AGG | + | chr5_4:13518152-13518171 | Msa0838930:intron | 25.0% |
| !! | AGCTTTATATTTATTGTGGA+GGG | + | chr5_4:13518153-13518172 | Msa0838930:intron | 25.0% |
| ! | ATCTTAAAACCGCAATAAAA+AGG | + | chr5_4:13518281-13518300 | Msa0838930:intron | 25.0% |
| ! | ATGAAATATAAAGGTCATCA+TGG | - | chr5_4:13518338-13518357 | None:intergenic | 25.0% |
| ! | CAACTCTGAATGAAATATAA+AGG | - | chr5_4:13518347-13518366 | None:intergenic | 25.0% |
| !! | CTTTTCTTGAATCAAAACTA+TGG | - | chr5_4:13518619-13518638 | None:intergenic | 25.0% |
| ! | AGTTTGAAAAGATATTCACT+CGG | - | chr5_4:13518711-13518730 | None:intergenic | 25.0% |
| !! | GATTTATTTGCTTGTTGATT+TGG | + | chr5_4:13518741-13518760 | Msa0838930:intron | 25.0% |
| ! | TCAAAAACAGAATTTCCAAT+AGG | - | chr5_4:13518964-13518983 | None:intergenic | 25.0% |
| !!! | AAATTCTGTTTTTGAAGAAG+TGG | + | chr5_4:13518969-13518988 | Msa0838930:CDS | 25.0% |
| ! | GAATGATGAAAATTCTATGA+AGG | + | chr5_4:13519017-13519036 | Msa0838930:CDS | 25.0% |
| ! | CAATGAAGAGATCAATATAT+TGG | + | chr5_4:13519311-13519330 | Msa0838930:CDS | 25.0% |
| ! | TACATGATCATTACACAAAT+TGG | + | chr5_4:13519464-13519483 | Msa0838930:three_prime_UTR | 25.0% |
| ! | GCTACAAAACTATATCAATT+AGG | - | chr5_4:13519500-13519519 | None:intergenic | 25.0% |
| !!! | AATTGATATAGTTTTGTAGC+TGG | + | chr5_4:13519500-13519519 | Msa0838930:three_prime_UTR | 25.0% |
| !! | AATGGGTTGAACTAAAAAAG+TGG | - | chr5_4:13514672-13514691 | None:intergenic | 30.0% |
| TGAATGAATCATTCTCTGTT+TGG | + | chr5_4:13514869-13514888 | Msa0838930:intron | 30.0% | |
| TGCTCAAGAAATTTGATGTT+TGG | + | chr5_4:13514981-13515000 | Msa0838930:intron | 30.0% | |
| !!! | GAAACTGATTTTTGAGTTGT+TGG | + | chr5_4:13515028-13515047 | Msa0838930:intron | 30.0% |
| GTCAACTGAAAACAAGAAAT+TGG | - | chr5_4:13515099-13515118 | None:intergenic | 30.0% | |
| TGAATATCTTGTAGCATTGT+AGG | + | chr5_4:13515451-13515470 | Msa0838930:intron | 30.0% | |
| GAATATCTTGTAGCATTGTA+GGG | + | chr5_4:13515452-13515471 | Msa0838930:intron | 30.0% | |
| CTACAAAGAAAAGTTAGAAC+GGG | + | chr5_4:13515481-13515500 | Msa0838930:five_prime_UTR | 30.0% | |
| ! | TTTTTGAATTCAATCAAGGG+AGG | + | chr5_4:13515589-13515608 | Msa0838930:CDS | 30.0% |
| TCCATTCATGTTATGATGAA+AGG | + | chr5_4:13515696-13515715 | Msa0838930:intron | 30.0% | |
| ACCTTTCATCATAACATGAA+TGG | - | chr5_4:13515700-13515719 | None:intergenic | 30.0% | |
| AAAAACAATCAAGCAAAGGA+GGG | - | chr5_4:13515832-13515851 | None:intergenic | 30.0% | |
| TAAAAACAATCAAGCAAAGG+AGG | - | chr5_4:13515833-13515852 | None:intergenic | 30.0% | |
| ACATATGAAGAGAAACTTAC+AGG | - | chr5_4:13515968-13515987 | None:intergenic | 30.0% | |
| ! | GAAATATGATGGTACTTTTC+TGG | - | chr5_4:13516082-13516101 | None:intergenic | 30.0% |
| AAAAGAAGGAGGAAATATGA+TGG | - | chr5_4:13516093-13516112 | None:intergenic | 30.0% | |
| ! | GAAACTGTCATTTATAGAGA+TGG | - | chr5_4:13516286-13516305 | None:intergenic | 30.0% |
| CTCTATAAATGACAGTTTCA+TGG | + | chr5_4:13516287-13516306 | Msa0838930:intron | 30.0% | |
| ATAAACCATAGTTCTTGTTC+TGG | + | chr5_4:13516360-13516379 | Msa0838930:intron | 30.0% | |
| TAATACCAGAACAAGAACTA+TGG | - | chr5_4:13516368-13516387 | None:intergenic | 30.0% | |
| ATTATCAAGTAGAAGAAGAC+TGG | + | chr5_4:13516444-13516463 | Msa0838930:CDS | 30.0% | |
| ! | TTTTCAAACAAGGGAACAAA+TGG | + | chr5_4:13516659-13516678 | Msa0838930:CDS | 30.0% |
| GAAATGAGTCGAATTCATTA+TGG | - | chr5_4:13516730-13516749 | None:intergenic | 30.0% | |
| CACATAATACAAGTATGCAA+AGG | + | chr5_4:13516972-13516991 | Msa0838930:CDS | 30.0% | |
| TCATGATTGAATATGCAATC+AGG | - | chr5_4:13517118-13517137 | None:intergenic | 30.0% | |
| ! | TATAGAAGATTTTCTTGAGG+AGG | + | chr5_4:13517183-13517202 | Msa0838930:CDS | 30.0% |
| AATCTCTACTGATAAATTCG+GGG | - | chr5_4:13517444-13517463 | None:intergenic | 30.0% | |
| GAATCTCTACTGATAAATTC+GGG | - | chr5_4:13517445-13517464 | None:intergenic | 30.0% | |
| !!! | TTTTGAAATGTGCAGATGAA+TGG | + | chr5_4:13517563-13517582 | Msa0838930:CDS | 30.0% |
| ! | TTTGAAATGTGCAGATGAAT+GGG | + | chr5_4:13517564-13517583 | Msa0838930:CDS | 30.0% |
| GAAGAAACAGAAATACAAAC+AGG | + | chr5_4:13517598-13517617 | Msa0838930:CDS | 30.0% | |
| AAATACAAACAGGATCTTTC+AGG | + | chr5_4:13517608-13517627 | Msa0838930:CDS | 30.0% | |
| AGCAAAACTGTATCTCAAAT+TGG | - | chr5_4:13517872-13517891 | None:intergenic | 30.0% | |
| TGGTAAGAGAAATCAATCAA+TGG | + | chr5_4:13517909-13517928 | Msa0838930:CDS | 30.0% | |
| ! | TTTTCTGCTATATGCTCTTT+AGG | + | chr5_4:13518384-13518403 | Msa0838930:intron | 30.0% |
| !!! | AGTTTTGATTCAAGAAAAGC+TGG | + | chr5_4:13518620-13518639 | Msa0838930:intron | 30.0% |
| TGGAATAAGTCTTTGTTAAG+AGG | + | chr5_4:13518922-13518941 | Msa0838930:CDS | 30.0% | |
| GGAATAAGTCTTTGTTAAGA+GGG | + | chr5_4:13518923-13518942 | Msa0838930:CDS | 30.0% | |
| GAATAAGTCTTTGTTAAGAG+GGG | + | chr5_4:13518924-13518943 | Msa0838930:CDS | 30.0% | |
| ACAAATCAAGCAAAATCTTG+TGG | - | chr5_4:13519065-13519084 | None:intergenic | 30.0% | |
| AGTGAATAAAGAGACATATC+CGG | - | chr5_4:13519240-13519259 | None:intergenic | 30.0% | |
| GATCAATATATTGGAAAGAG+AGG | + | chr5_4:13519320-13519339 | Msa0838930:CDS | 30.0% | |
| CAATAAAGAGTTCCATACAT+TGG | + | chr5_4:13519427-13519446 | Msa0838930:three_prime_UTR | 30.0% | |
| CATGAGTGAAGTGAATAATT+AGG | + | chr5_4:13519614-13519633 | Msa0838930:three_prime_UTR | 30.0% | |
| TGATAAGAACATGCACAATT+TGG | + | chr5_4:13519743-13519762 | Msa0838930:three_prime_UTR | 30.0% | |
| ! | AATGATAATGACAGAGGAAC+AGG | - | chr5_4:13514546-13514565 | None:intergenic | 35.0% |
| ! | GTGACTAATGATAATGACAG+AGG | - | chr5_4:13514552-13514571 | None:intergenic | 35.0% |
| ! | GTTTCTAAGAGTGAATTCTG+AGG | + | chr5_4:13515003-13515022 | Msa0838930:intron | 35.0% |
| ! | GCAGATTAGTCCATCTATAA+AGG | + | chr5_4:13515256-13515275 | Msa0838930:intron | 35.0% |
| ACACATGGAAGATGAAATTG+AGG | + | chr5_4:13515522-13515541 | Msa0838930:five_prime_UTR | 35.0% | |
| ! | AGTCTTTTGGTAGACTGTAT+GGG | + | chr5_4:13515552-13515571 | Msa0838930:exon | 35.0% |
| ! | TATGATGTCTTTTGTGAGCA+TGG | - | chr5_4:13515629-13515648 | None:intergenic | 35.0% |
| TGCATATCTTGCTGAAATTC+AGG | + | chr5_4:13515741-13515760 | Msa0838930:intron | 35.0% | |
| !!! | GTTTTCCCCCTTATTTTCTT+CGG | + | chr5_4:13515763-13515782 | Msa0838930:intron | 35.0% |
| TGACAACCGAAGAAAATAAG+GGG | - | chr5_4:13515772-13515791 | None:intergenic | 35.0% | |
| GTGACAACCGAAGAAAATAA+GGG | - | chr5_4:13515773-13515792 | None:intergenic | 35.0% | |
| TGTGACAACCGAAGAAAATA+AGG | - | chr5_4:13515774-13515793 | None:intergenic | 35.0% | |
| GTTGAAACATCTCAGAAGTA+CGG | + | chr5_4:13515926-13515945 | Msa0838930:CDS | 35.0% | |
| TTCTTATATCCCCTTGTTCT+TGG | + | chr5_4:13516132-13516151 | Msa0838930:intron | 35.0% | |
| TCATTGTTACCAAGAACAAG+GGG | - | chr5_4:13516144-13516163 | None:intergenic | 35.0% | |
| GTCATTGTTACCAAGAACAA+GGG | - | chr5_4:13516145-13516164 | None:intergenic | 35.0% | |
| ATATTGAGAAAGATCCCTCA+AGG | + | chr5_4:13516198-13516217 | Msa0838930:intron | 35.0% | |
| ! | GGGAAGAAGTTTTCAAACAA+GGG | + | chr5_4:13516650-13516669 | Msa0838930:CDS | 35.0% |
| TGTTCAAAGTTTGCCGAAAT+CGG | + | chr5_4:13516890-13516909 | Msa0838930:CDS | 35.0% | |
| AGAGAATCGAAACAACGAAA+AGG | + | chr5_4:13516940-13516959 | Msa0838930:CDS | 35.0% | |
| !! | AGAATTGGACTAGTTCAACA+GGG | + | chr5_4:13517140-13517159 | Msa0838930:CDS | 35.0% |
| TCTTCTATACTATGTCTACC+TGG | - | chr5_4:13517172-13517191 | None:intergenic | 35.0% | |
| ATTTGACGAGCAATAAGCTT+AGG | - | chr5_4:13517313-13517332 | None:intergenic | 35.0% | |
| GAATCAACAAGATCATACGA+AGG | + | chr5_4:13517391-13517410 | Msa0838930:CDS | 35.0% | |
| TCAAGATCAGGAACATCATT+TGG | + | chr5_4:13517712-13517731 | Msa0838930:CDS | 35.0% | |
| ATTTGGAAAGCTTCTACTAG+AGG | + | chr5_4:13517729-13517748 | Msa0838930:CDS | 35.0% | |
| !! | AGATACAGTTTTGCTCTAAG+AGG | + | chr5_4:13517877-13517896 | Msa0838930:CDS | 35.0% |
| !!! | GATACAGTTTTGCTCTAAGA+GGG | + | chr5_4:13517878-13517897 | Msa0838930:CDS | 35.0% |
| CAATCAATGGTAGAATCACA+TGG | + | chr5_4:13517922-13517941 | Msa0838930:CDS | 35.0% | |
| ATTGTGGAGGGATAAATAGA+TGG | + | chr5_4:13518165-13518184 | Msa0838930:intron | 35.0% | |
| ! | CCGTTCATTCCTTTTTATTG+CGG | - | chr5_4:13518293-13518312 | None:intergenic | 35.0% |
| CCGCAATAAAAAGGAATGAA+CGG | + | chr5_4:13518290-13518309 | Msa0838930:intron | 35.0% | |
| TCTCTTATGTAAGATTCTGC+TGG | - | chr5_4:13518868-13518887 | None:intergenic | 35.0% | |
| ! | AGAGATTTACTTGTTGCTTC+TGG | + | chr5_4:13518883-13518902 | Msa0838930:CDS | 35.0% |
| !! | GTTGCTTCTGGTTTATACTT+TGG | + | chr5_4:13518895-13518914 | Msa0838930:CDS | 35.0% |
| !! | CTGGTTTATACTTTGGTTCT+TGG | + | chr5_4:13518902-13518921 | Msa0838930:CDS | 35.0% |
| GATACATATGCAAAGCCTAT+TGG | + | chr5_4:13518946-13518965 | Msa0838930:CDS | 35.0% | |
| GAATCACTTTCAGTTGTTCT+TGG | + | chr5_4:13519090-13519109 | Msa0838930:CDS | 35.0% | |
| AGGAACTGTTGAAGTTAGTA+TGG | + | chr5_4:13519184-13519203 | Msa0838930:CDS | 35.0% | |
| GGAACTGTTGAAGTTAGTAT+GGG | + | chr5_4:13519185-13519204 | Msa0838930:CDS | 35.0% | |
| GTGAAGGATATAACGAAACA+CGG | - | chr5_4:13519218-13519237 | None:intergenic | 35.0% | |
| TGTTTCGTTATATCCTTCAC+CGG | + | chr5_4:13519218-13519237 | Msa0838930:CDS | 35.0% | |
| ! | AACATTTGAGTTCAATCCCT+TGG | + | chr5_4:13519277-13519296 | Msa0838930:CDS | 35.0% |
| ! | CATTGATTATTCCAGACCAA+GGG | - | chr5_4:13519296-13519315 | None:intergenic | 35.0% |
| ! | TCATTGATTATTCCAGACCA+AGG | - | chr5_4:13519297-13519316 | None:intergenic | 35.0% |
| TCTTGTTGAAGAACTCACAA+AGG | + | chr5_4:13519365-13519384 | Msa0838930:CDS | 35.0% | |
| TAAAGAGTTCCATACATTGG+TGG | + | chr5_4:13519430-13519449 | Msa0838930:three_prime_UTR | 35.0% | |
| !! | ATGTGGGTGTTGTTGAAAAG+TGG | - | chr5_4:13514724-13514743 | None:intergenic | 40.0% |
| TGGACTAATCTGCTACCTTA+AGG | - | chr5_4:13515249-13515268 | None:intergenic | 40.0% | |
| AATTCTAGTGGAGTGACACA+TGG | + | chr5_4:13515507-13515526 | Msa0838930:five_prime_UTR | 40.0% | |
| ! | TTGAGGACATGAGAGTCTTT+TGG | + | chr5_4:13515539-13515558 | Msa0838930:five_prime_UTR | 40.0% |
| ! | GAGTCTTTTGGTAGACTGTA+TGG | + | chr5_4:13515551-13515570 | Msa0838930:exon | 40.0% |
| TGAATTCAATCAAGGGAGGA+TGG | + | chr5_4:13515593-13515612 | Msa0838930:CDS | 40.0% | |
| TTTGTGAGCATGGACTTTCT+TGG | - | chr5_4:13515619-13515638 | None:intergenic | 40.0% | |
| GCTCACAAAAGACATCATAG+TGG | + | chr5_4:13515630-13515649 | Msa0838930:CDS | 40.0% | |
| GACAACCGAAGAAAATAAGG+GGG | - | chr5_4:13515771-13515790 | None:intergenic | 40.0% | |
| CTTACAGGTAATTCTCCTTC+TGG | - | chr5_4:13515953-13515972 | None:intergenic | 40.0% | |
| GGTCAATGATTGTTTCAGCT+AGG | - | chr5_4:13516061-13516080 | None:intergenic | 40.0% | |
| ATATAAGAAGTCCTTCAGGG+GGG | - | chr5_4:13516121-13516140 | None:intergenic | 40.0% | |
| GATATAAGAAGTCCTTCAGG+GGG | - | chr5_4:13516122-13516141 | None:intergenic | 40.0% | |
| GGATATAAGAAGTCCTTCAG+GGG | - | chr5_4:13516123-13516142 | None:intergenic | 40.0% | |
| GGGATATAAGAAGTCCTTCA+GGG | - | chr5_4:13516124-13516143 | None:intergenic | 40.0% | |
| GGTCATTGTTACCAAGAACA+AGG | - | chr5_4:13516146-13516165 | None:intergenic | 40.0% | |
| AATAATCGTTATTCAGGCGC+TGG | + | chr5_4:13516473-13516492 | Msa0838930:CDS | 40.0% | |
| TATCCAATCGATCAAGCACA+TGG | + | chr5_4:13516525-13516544 | Msa0838930:CDS | 40.0% | |
| ! | CTTTTATCTGATGGAGCAAC+AGG | - | chr5_4:13516614-13516633 | None:intergenic | 40.0% |
| ! | GGGGAAGAAGTTTTCAAACA+AGG | + | chr5_4:13516649-13516668 | Msa0838930:CDS | 40.0% |
| CAAACAAGGGAACAAATGGA+AGG | + | chr5_4:13516663-13516682 | Msa0838930:CDS | 40.0% | |
| ATGGAAGGAGTTCAGTTAGT+TGG | + | chr5_4:13516678-13516697 | Msa0838930:CDS | 40.0% | |
| TGGAAGGAGTTCAGTTAGTT+GGG | + | chr5_4:13516679-13516698 | Msa0838930:CDS | 40.0% | |
| !! | TTCTGAAGTTCCATTTCCTG+TGG | - | chr5_4:13516824-13516843 | None:intergenic | 40.0% |
| TTGAAGCATATCAAGCAGCA+AGG | + | chr5_4:13516858-13516877 | Msa0838930:CDS | 40.0% | |
| ATATCAAGCAGCAAGGTTTC+AGG | + | chr5_4:13516865-13516884 | Msa0838930:CDS | 40.0% | |
| CTTAGAGTTCTGCTCTTTGA+AGG | - | chr5_4:13517007-13517026 | None:intergenic | 40.0% | |
| AGGTTTCAAGATAACGATCC+GGG | - | chr5_4:13517092-13517111 | None:intergenic | 40.0% | |
| CAGGTTTCAAGATAACGATC+CGG | - | chr5_4:13517093-13517112 | None:intergenic | 40.0% | |
| TTGAATATGCAATCAGGACC+AGG | - | chr5_4:13517112-13517131 | None:intergenic | 40.0% | |
| !! | GAGAATTGGACTAGTTCAAC+AGG | + | chr5_4:13517139-13517158 | Msa0838930:CDS | 40.0% |
| GAACTGCAAGGAAAAACTGT+CGG | + | chr5_4:13517226-13517245 | Msa0838930:CDS | 40.0% | |
| CAAGGAAAAACTGTCGGAAA+AGG | + | chr5_4:13517232-13517251 | Msa0838930:CDS | 40.0% | |
| AACTGTCGGAAAAGGTTATG+CGG | + | chr5_4:13517240-13517259 | Msa0838930:CDS | 40.0% | |
| GTGTCTCAATATCACTTCCT+CGG | - | chr5_4:13517267-13517286 | None:intergenic | 40.0% | |
| GCAATAAGCTTAGGATCAGA+TGG | - | chr5_4:13517304-13517323 | None:intergenic | 40.0% | |
| TGAGCAGACTGAATTTGAGT+TGG | - | chr5_4:13517371-13517390 | None:intergenic | 40.0% | |
| ACAAGATCATACGAAGGTGA+AGG | + | chr5_4:13517397-13517416 | Msa0838930:CDS | 40.0% | |
| AAGGATCTTACAAGGTTCCT+TGG | - | chr5_4:13517679-13517698 | None:intergenic | 40.0% | |
| GATGTTCCTGATCTTGATAC+AGG | - | chr5_4:13517709-13517728 | None:intergenic | 40.0% | |
| CCAACAGTTCTTATGAACGA+CGG | + | chr5_4:13517985-13518004 | Msa0838930:CDS | 40.0% | |
| ! | GAAACGGAATGAGTAATGGA+GGG | - | chr5_4:13518040-13518059 | None:intergenic | 40.0% |
| TGAAACGGAATGAGTAATGG+AGG | - | chr5_4:13518041-13518060 | None:intergenic | 40.0% | |
| GGTTGAAACGGAATGAGTAA+TGG | - | chr5_4:13518044-13518063 | None:intergenic | 40.0% | |
| GAATTCTTCTGCAGAAGTGA+GGG | - | chr5_4:13518065-13518084 | None:intergenic | 40.0% | |
| ! | TCTTTAGGAGAACTACACTG+AGG | + | chr5_4:13518399-13518418 | Msa0838930:intron | 40.0% |
| ! | GCAGTGTTCATGAAGACTTT+TGG | + | chr5_4:13518449-13518468 | Msa0838930:CDS | 40.0% |
| ! | GTGTTCATGAAGACTTTTGG+AGG | + | chr5_4:13518452-13518471 | Msa0838930:CDS | 40.0% |
| !! | GACAAATCAGGAGTTGATAC+TGG | - | chr5_4:13518496-13518515 | None:intergenic | 40.0% |
| ! | CTGATGTCTCTGAAAACTTG+TGG | - | chr5_4:13518541-13518560 | None:intergenic | 40.0% |
| !! | TTGTTGATTTGGCAGAGCTA+AGG | + | chr5_4:13518752-13518771 | Msa0838930:intron | 40.0% |
| ACTTGATTCTAGTGATGTCG+AGG | + | chr5_4:13518789-13518808 | Msa0838930:CDS | 40.0% | |
| AATCTAGACAGTGTCAAAGG+TGG | - | chr5_4:13519117-13519136 | None:intergenic | 40.0% | |
| CTGAATCTAGACAGTGTCAA+AGG | - | chr5_4:13519120-13519139 | None:intergenic | 40.0% | |
| TTCAACAGTTCCTTTCCTTG+AGG | - | chr5_4:13519177-13519196 | None:intergenic | 40.0% | |
| TAAAGAGACATATCCGGTGA+AGG | - | chr5_4:13519234-13519253 | None:intergenic | 40.0% | |
| TAGAACGGGCGTAATTCTAG+TGG | + | chr5_4:13515495-13515514 | Msa0838930:five_prime_UTR | 45.0% | |
| ! | CTTTTGGTAGACTGTATGGG+AGG | + | chr5_4:13515555-13515574 | Msa0838930:exon | 45.0% |
| CAATCAAGCAAAGGAGGGAA+GGG | - | chr5_4:13515827-13515846 | None:intergenic | 45.0% | |
| ACAATCAAGCAAAGGAGGGA+AGG | - | chr5_4:13515828-13515847 | None:intergenic | 45.0% | |
| GATGAGTTTCAAAGTCTGCG+TGG | - | chr5_4:13515886-13515905 | None:intergenic | 45.0% | |
| TTCAGCTAGGATTCGAACTC+AGG | - | chr5_4:13516048-13516067 | None:intergenic | 45.0% | |
| TATAAGAAGTCCTTCAGGGG+GGG | - | chr5_4:13516120-13516139 | None:intergenic | 45.0% | |
| GGGGATATAAGAAGTCCTTC+AGG | - | chr5_4:13516125-13516144 | None:intergenic | 45.0% | |
| AGAAAGATCCCTCAAGGTTG+TGG | + | chr5_4:13516204-13516223 | Msa0838930:intron | 45.0% | |
| GAAAGATCCCTCAAGGTTGT+GGG | + | chr5_4:13516205-13516224 | Msa0838930:intron | 45.0% | |
| GGAGAGTAGAGCACATGTAT+AGG | + | chr5_4:13516226-13516245 | Msa0838930:intron | 45.0% | |
| GTAGAGCACATGTATAGGCT+TGG | + | chr5_4:13516231-13516250 | Msa0838930:intron | 45.0% | |
| ! | CACATGTATAGGCTTGGTCT+TGG | + | chr5_4:13516237-13516256 | Msa0838930:intron | 45.0% |
| GCAACAGGTTTAGTGTCTAC+AGG | - | chr5_4:13516599-13516618 | None:intergenic | 45.0% | |
| ! | AAAGATGACGGCGATGATGA+TGG | + | chr5_4:13516758-13516777 | Msa0838930:CDS | 45.0% |
| !!! | GCCAGAGTTTTGGAGAACAA+AGG | + | chr5_4:13516786-13516805 | Msa0838930:CDS | 45.0% |
| GCCTTTGTTCTCCAAAACTC+TGG | - | chr5_4:13516790-13516809 | None:intergenic | 45.0% | |
| !!! | GTTTTGGAGAACAAAGGCGT+CGG | + | chr5_4:13516792-13516811 | Msa0838930:CDS | 45.0% |
| !!! | TTTTGGAGAACAAAGGCGTC+GGG | + | chr5_4:13516793-13516812 | Msa0838930:CDS | 45.0% |
| !! | GCTAGAAACACTGCCGATTT+CGG | - | chr5_4:13516906-13516925 | None:intergenic | 45.0% |
| TAGATGCATCTTCTCCAACC+CGG | + | chr5_4:13517071-13517090 | Msa0838930:CDS | 45.0% | |
| TTCAAGATAACGATCCGGGT+TGG | - | chr5_4:13517088-13517107 | None:intergenic | 45.0% | |
| CGGATCGTTATCTTGAAACC+TGG | + | chr5_4:13517091-13517110 | Msa0838930:CDS | 45.0% | |
| AGTTCAACAGGGACTTTACC+AGG | + | chr5_4:13517151-13517170 | Msa0838930:CDS | 45.0% | |
| ! | CGTTTGAAATGCGAACTGCA+AGG | + | chr5_4:13517214-13517233 | Msa0838930:CDS | 45.0% |
| CTGATAAATTCGGGGACACT+TGG | - | chr5_4:13517436-13517455 | None:intergenic | 45.0% | |
| TTGGAGACAACAACTCTCTG+TGG | - | chr5_4:13517660-13517679 | None:intergenic | 45.0% | |
| ACAGAGAGTTGTTGTCTCCA+AGG | + | chr5_4:13517659-13517678 | Msa0838930:CDS | 45.0% | |
| GAGCAGACAAGGATCTTACA+AGG | - | chr5_4:13517687-13517706 | None:intergenic | 45.0% | |
| TCTTGATACAGGAGCAGACA+AGG | - | chr5_4:13517698-13517717 | None:intergenic | 45.0% | |
| TCTGCTCCTGTATCAAGATC+AGG | + | chr5_4:13517700-13517719 | Msa0838930:CDS | 45.0% | |
| GAAAGCTTCTACTAGAGGAC+CGG | + | chr5_4:13517734-13517753 | Msa0838930:CDS | 45.0% | |
| ! | TTTTAACCGGGGCTCATATC+CGG | + | chr5_4:13517761-13517780 | Msa0838930:CDS | 45.0% |
| !!! | ACAGTTTTGCTCTAAGAGGG+AGG | + | chr5_4:13517881-13517900 | Msa0838930:CDS | 45.0% |
| !!! | GCTCTAAGAGGGAGGATTTT+TGG | + | chr5_4:13517889-13517908 | Msa0838930:CDS | 45.0% |
| CCGTCGTTCATAAGAACTGT+TGG | - | chr5_4:13517988-13518007 | None:intergenic | 45.0% | |
| ACAGTTCTTATGAACGACGG+TGG | + | chr5_4:13517988-13518007 | Msa0838930:CDS | 45.0% | |
| TGCAGAAGTGAGGGTTGAAA+CGG | - | chr5_4:13518056-13518075 | None:intergenic | 45.0% | |
| CGAATTCTTCTGCAGAAGTG+AGG | - | chr5_4:13518066-13518085 | None:intergenic | 45.0% | |
| TCGTCTCTTGAGGACAAATC+AGG | - | chr5_4:13518508-13518527 | None:intergenic | 45.0% | |
| ! | GTTTTCAGAGACATCAGCTC+TGG | + | chr5_4:13518544-13518563 | Msa0838930:CDS | 45.0% |
| ! | GACATCAGCTCTGGTTTAAC+TGG | + | chr5_4:13518553-13518572 | Msa0838930:CDS | 45.0% |
| ATTCAGACTCAGACGGTTTC+TGG | - | chr5_4:13518828-13518847 | None:intergenic | 45.0% | |
| GAAACCGTCTGAGTCTGAAT+TGG | + | chr5_4:13518828-13518847 | Msa0838930:CDS | 45.0% | |
| TGCACCAATTCAGACTCAGA+CGG | - | chr5_4:13518835-13518854 | None:intergenic | 45.0% | |
| AACAGTTCCTTTCCTTGAGG+CGG | - | chr5_4:13519174-13519193 | None:intergenic | 45.0% | |
| TTGAGTTCAATCCCTTGGTC+TGG | + | chr5_4:13519282-13519301 | Msa0838930:CDS | 45.0% | |
| TTCCATACATTGGTGGAGCA+AGG | + | chr5_4:13519437-13519456 | Msa0838930:three_prime_UTR | 45.0% | |
| TCCATACATTGGTGGAGCAA+GGG | + | chr5_4:13519438-13519457 | Msa0838930:three_prime_UTR | 45.0% | |
| TGTGTGAGTGTGTGTGATGT+AGG | + | chr5_4:13519561-13519580 | Msa0838930:three_prime_UTR | 45.0% | |
| GTGTGAGTGTGTGTGATGTA+GGG | + | chr5_4:13519562-13519581 | Msa0838930:three_prime_UTR | 45.0% | |
| TGTGAGTGTGTGTGATGTAG+GGG | + | chr5_4:13519563-13519582 | Msa0838930:three_prime_UTR | 45.0% | |
| !! | ATGTAGGGGGTATTGAGTTG+TGG | + | chr5_4:13519577-13519596 | Msa0838930:three_prime_UTR | 45.0% |
| GGAACAGGCTACGAGGTTAA+GGG | - | chr5_4:13514531-13514550 | None:intergenic | 50.0% | |
| AGGAACAGGCTACGAGGTTA+AGG | - | chr5_4:13514532-13514551 | None:intergenic | 50.0% | |
| ! | TCTCAGAAGTACGGTCCAGA+AGG | + | chr5_4:13515935-13515954 | Msa0838930:CDS | 50.0% |
| ATAAGAAGTCCTTCAGGGGG+GGG | - | chr5_4:13516119-13516138 | None:intergenic | 50.0% | |
| CTACTCTCCCACAACCTTGA+GGG | - | chr5_4:13516215-13516234 | None:intergenic | 50.0% | |
| TCTACTCTCCCACAACCTTG+AGG | - | chr5_4:13516216-13516235 | None:intergenic | 50.0% | |
| CTGCCATGTGCTTGATCGAT+TGG | - | chr5_4:13516531-13516550 | None:intergenic | 50.0% | |
| !! | ATGACGGCGATGATGATGGA+TGG | + | chr5_4:13516762-13516781 | Msa0838930:CDS | 50.0% |
| ! | GATGGATGGAGCCAGAGTTT+TGG | + | chr5_4:13516776-13516795 | Msa0838930:CDS | 50.0% |
| TCGGGAACATCCACAGGAAA+TGG | + | chr5_4:13516811-13516830 | Msa0838930:CDS | 50.0% | |
| !! | GAGGACCGGCACATTTTAAC+CGG | + | chr5_4:13517748-13517767 | Msa0838930:CDS | 50.0% |
| !! | AGGACCGGCACATTTTAACC+GGG | + | chr5_4:13517749-13517768 | Msa0838930:CDS | 50.0% |
| TATCCGGAGGAAGCTTGAAG+CGG | + | chr5_4:13517777-13517796 | Msa0838930:CDS | 50.0% | |
| ACCCTTGCTCCACCAATGTA+TGG | - | chr5_4:13519442-13519461 | None:intergenic | 50.0% | |
| GTGAGTGTGTGTGATGTAGG+GGG | + | chr5_4:13519564-13519583 | Msa0838930:three_prime_UTR | 50.0% | |
| TGACAGAGGAACAGGCTACG+AGG | - | chr5_4:13514538-13514557 | None:intergenic | 55.0% | |
| GCAAAGGAGGGAAGGGAACA+GGG | - | chr5_4:13515820-13515839 | None:intergenic | 55.0% | |
| AGCAAAGGAGGGAAGGGAAC+AGG | - | chr5_4:13515821-13515840 | None:intergenic | 55.0% | |
| TAAGAAGTCCTTCAGGGGGG+GGG | - | chr5_4:13516118-13516137 | None:intergenic | 55.0% | |
| ATCAACCTCGCCACAAGGCT+TGG | - | chr5_4:13516560-13516579 | None:intergenic | 55.0% | |
| ! | AAGCCTTGTGGCGAGGTTGA+TGG | + | chr5_4:13516559-13516578 | Msa0838930:CDS | 55.0% |
| ! | AGCCTTGTGGCGAGGTTGAT+GGG | + | chr5_4:13516560-13516579 | Msa0838930:CDS | 55.0% |
| GGAAAAGGTTATGCGGTCCG+AGG | + | chr5_4:13517247-13517266 | Msa0838930:CDS | 55.0% | |
| !! | GGACCGGCACATTTTAACCG+GGG | + | chr5_4:13517750-13517769 | Msa0838930:CDS | 55.0% |
| GAGCCCCGGTTAAAATGTGC+CGG | - | chr5_4:13517756-13517775 | None:intergenic | 55.0% | |
| CAACCGCTTCAAGCTTCCTC+CGG | - | chr5_4:13517783-13517802 | None:intergenic | 55.0% | |
| CTGCACACAGATGCAGGACT+CGG | - | chr5_4:13518430-13518449 | None:intergenic | 55.0% | |
| ACACTGCTGCACACAGATGC+AGG | - | chr5_4:13518436-13518455 | None:intergenic | 55.0% | |
| CACAGCAGTCTCGTCTCTTG+AGG | - | chr5_4:13518518-13518537 | None:intergenic | 55.0% | |
| TCAGGGGGGGGGGTAAAAGA+AGG | - | chr5_4:13516107-13516126 | None:intergenic | 60.0% | |
| ! | TCTTTTACCCCCCCCCCTGA+AGG | + | chr5_4:13516107-13516126 | Msa0838930:intron | 60.0% |
| AAGAAGTCCTTCAGGGGGGG+GGG | - | chr5_4:13516117-13516136 | None:intergenic | 60.0% | |
| GCAGACTGCACCAAGCCTTG+TGG | + | chr5_4:13516547-13516566 | Msa0838930:CDS | 60.0% | |
| !! | GCCTTGTGGCGAGGTTGATG+GGG | + | chr5_4:13516561-13516580 | Msa0838930:CDS | 60.0% |
| ACCCCATCAACCTCGCCACA+AGG | - | chr5_4:13516565-13516584 | None:intergenic | 60.0% | |
| !! | AAGGCGTCGGGAACATCCAC+AGG | + | chr5_4:13516805-13516824 | Msa0838930:CDS | 60.0% |
| TAACCGGGGCTCATATCCGG+AGG | + | chr5_4:13517764-13517783 | Msa0838930:CDS | 60.0% | |
| CTTCCTCCGGATATGAGCCC+CGG | - | chr5_4:13517770-13517789 | None:intergenic | 60.0% | |
| CACACAGATGCAGGACTCGG+AGG | - | chr5_4:13518427-13518446 | None:intergenic | 60.0% | |
| TCCATGTTGTCGCCGCCTCA+AGG | + | chr5_4:13519159-13519178 | Msa0838930:CDS | 60.0% | |
| TCCTTGAGGCGGCGACAACA+TGG | - | chr5_4:13519163-13519182 | None:intergenic | 60.0% | |
| GTTGTCGCCGCCTCAAGGAA+AGG | + | chr5_4:13519164-13519183 | Msa0838930:CDS | 60.0% | |
| GGGGGGGGGGTAAAAGAAGG+AGG | - | chr5_4:13516104-13516123 | None:intergenic | 65.0% | |
| ! | CTGCACCAAGCCTTGTGGCG+AGG | + | chr5_4:13516552-13516571 | Msa0838930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 13514470 | 13519772 | 13514470 | ID=Msa0838930;Name=Msa0838930 |
| chr5_4 | mRNA | 13514470 | 13519772 | 13514470 | ID=Msa0838930-mRNA-1;Parent=Msa0838930;Name=Msa0838930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=455|1|1|1|0.8|0.66|6|374|846 |
| chr5_4 | exon | 13514470 | 13514819 | 13514470 | ID=Msa0838930-mRNA-1:exon:6024;Parent=Msa0838930-mRNA-1 |
| chr5_4 | exon | 13515465 | 13515651 | 13515465 | ID=Msa0838930-mRNA-1:exon:6025;Parent=Msa0838930-mRNA-1 |
| chr5_4 | exon | 13515891 | 13515967 | 13515891 | ID=Msa0838930-mRNA-1:exon:6026;Parent=Msa0838930-mRNA-1 |
| chr5_4 | exon | 13516440 | 13518020 | 13516440 | ID=Msa0838930-mRNA-1:exon:6027;Parent=Msa0838930-mRNA-1 |
| chr5_4 | exon | 13518406 | 13518574 | 13518406 | ID=Msa0838930-mRNA-1:exon:6028;Parent=Msa0838930-mRNA-1 |
| chr5_4 | exon | 13518767 | 13519772 | 13518767 | ID=Msa0838930-mRNA-1:exon:6029;Parent=Msa0838930-mRNA-1 |
| chr5_4 | five_prime_UTR | 13514470 | 13514819 | 13514470 | ID=Msa0838930-mRNA-1:five_prime_utr;Parent=Msa0838930-mRNA-1 |
| chr5_4 | five_prime_UTR | 13515465 | 13515569 | 13515465 | ID=Msa0838930-mRNA-1:five_prime_utr;Parent=Msa0838930-mRNA-1 |
| chr5_4 | CDS | 13515570 | 13515651 | 13515570 | ID=Msa0838930-mRNA-1:cds;Parent=Msa0838930-mRNA-1 |
| chr5_4 | CDS | 13515891 | 13515967 | 13515891 | ID=Msa0838930-mRNA-1:cds;Parent=Msa0838930-mRNA-1 |
| chr5_4 | CDS | 13516440 | 13518020 | 13516440 | ID=Msa0838930-mRNA-1:cds;Parent=Msa0838930-mRNA-1 |
| chr5_4 | CDS | 13518406 | 13518574 | 13518406 | ID=Msa0838930-mRNA-1:cds;Parent=Msa0838930-mRNA-1 |
| chr5_4 | CDS | 13518767 | 13519398 | 13518767 | ID=Msa0838930-mRNA-1:cds;Parent=Msa0838930-mRNA-1 |
| chr5_4 | three_prime_UTR | 13519399 | 13519772 | 13519399 | ID=Msa0838930-mRNA-1:three_prime_utr;Parent=Msa0838930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
