AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1336470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336470 MtrunA17_Chr5g0430091 91.572 439 37 0 3 441 2 440 0.0 804
Msa1336470 MtrunA17_Chr5g0430101 84.332 434 66 1 8 441 6 437 0.0 758
Msa1336470 MtrunA17_Chr5g0430131 83.144 439 73 1 3 441 2 439 0.0 733
Msa1336470 MtrunA17_Chr5g0430031 79.592 441 89 1 1 441 1 440 0.0 733
Msa1336470 MtrunA17_Chr5g0430081 82.719 434 75 0 8 441 5 438 0.0 731
Msa1336470 MtrunA17_Chr5g0430111 80.941 425 81 0 3 427 2 426 0.0 720
Msa1336470 MtrunA17_Chr8g0390881 60.137 439 170 3 7 441 3 440 0.0 544
Msa1336470 MtrunA17_Chr6g0484841 57.656 418 175 2 25 441 24 440 1.93e-180 513
Msa1336470 MtrunA17_Chr6g0484811 56.064 437 180 3 16 441 6 441 1.62e-173 496
Msa1336470 MtrunA17_Chr5g0430071 81.229 293 55 0 149 441 1 293 7.74e-168 476
Msa1336470 MtrunA17_Chr2g0310391 45.057 435 225 6 14 441 2 429 6.14e-130 384
Msa1336470 MtrunA17_Chr2g0310381 45.946 407 208 4 40 441 30 429 6.35e-127 376
Msa1336470 MtrunA17_Chr8g0382901 45.958 433 218 7 15 441 468 890 3.76e-122 378
Msa1336470 MtrunA17_Chr8g0382901 47.044 406 194 6 37 441 26 411 1.25e-117 366
Msa1336470 MtrunA17_Chr5g0430171 79.386 228 47 0 3 230 2 229 1.10e-120 350
Msa1336470 MtrunA17_Chr4g0058231 41.136 440 236 8 15 441 8 437 4.50e-111 336
Msa1336470 MtrunA17_Chr4g0058191 42.469 405 221 7 42 441 29 426 5.73e-111 335
Msa1336470 MtrunA17_Chr3g0101601 42.129 451 225 11 7 441 3 433 2.68e-110 334
Msa1336470 MtrunA17_Chr4g0047631 41.518 448 244 9 3 441 10 448 1.09e-108 330
Msa1336470 MtrunA17_Chr4g0047641 40.969 454 244 10 3 441 8 452 1.83e-108 330
Msa1336470 MtrunA17_Chr5g0403331 39.408 439 246 7 13 441 12 440 2.59e-108 329
Msa1336470 MtrunA17_Chr3g0101631 40.225 445 242 8 5 441 4 432 1.75e-107 327
Msa1336470 MtrunA17_Chr3g0101721 43.659 410 212 7 41 441 40 439 6.89e-107 325
Msa1336470 MtrunA17_Chr4g0047691 40.618 453 244 9 3 441 10 451 8.40e-107 326
Msa1336470 MtrunA17_Chr3g0101621 42.308 442 226 12 10 441 5 427 1.23e-106 324
Msa1336470 MtrunA17_Chr6g0465511 39.456 441 249 8 10 441 6 437 1.27e-106 325
Msa1336470 MtrunA17_Chr3g0101731 42.543 409 217 8 41 441 39 437 6.75e-106 323
Msa1336470 MtrunA17_Chr3g0101711 39.326 445 254 7 5 441 4 440 9.60e-106 322
Msa1336470 MtrunA17_Chr3g0101691 40.976 410 226 7 40 441 40 441 1.01e-105 322
Msa1336470 MtrunA17_Chr6g0466331 39.456 441 249 8 10 441 6 437 1.40e-105 322
Msa1336470 MtrunA17_Chr8g0361471 39.229 441 250 7 10 441 6 437 2.00e-105 322
Msa1336470 MtrunA17_Chr4g0047661 41.463 451 245 11 3 441 10 453 4.15e-105 321
Msa1336470 MtrunA17_Chr3g0116681 38.444 437 252 10 11 441 14 439 4.33e-105 321
Msa1336470 MtrunA17_Chr1g0156101 41.706 422 218 8 40 441 34 447 9.79e-104 318
Msa1336470 MtrunA17_Chr3g0101651 41.463 410 224 7 40 441 40 441 3.29e-103 316
Msa1336470 MtrunA17_Chr3g0101701 39.951 408 233 6 40 441 40 441 3.83e-103 316
Msa1336470 MtrunA17_Chr3g0101661 39.910 446 250 9 5 441 4 440 5.46e-103 316
Msa1336470 MtrunA17_Chr4g0058201 42.054 409 220 8 40 441 30 428 7.10e-103 315
Msa1336470 MtrunA17_Chr5g0403321 39.059 425 238 6 30 441 26 442 1.13e-102 315
Msa1336470 MtrunA17_Chr3g0101571 39.456 441 249 8 6 441 8 435 2.21e-102 313
Msa1336470 MtrunA17_Chr3g0101581 39.367 442 250 8 6 441 9 438 2.55e-102 313
Msa1336470 MtrunA17_Chr3g0101751 41.943 453 237 10 1 441 6 444 2.06e-101 311
Msa1336470 MtrunA17_Chr6g0463801 41.346 416 229 7 30 441 29 433 2.94e-101 311
Msa1336470 MtrunA17_Chr3g0101611 40.931 408 227 6 40 441 40 439 3.27e-101 311
Msa1336470 MtrunA17_Chr8g0344151 38.200 411 237 5 40 441 38 440 3.56e-101 311
Msa1336470 MtrunA17_Chr3g0101761 41.441 444 238 9 10 441 4 437 7.96e-101 310
Msa1336470 MtrunA17_Chr3g0101831 41.629 442 235 8 13 441 7 438 1.74e-100 309
Msa1336470 MtrunA17_Chr4g0058261 40.436 413 230 7 38 441 62 467 2.11e-100 310
Msa1336470 MtrunA17_Chr4g0020041 39.955 443 244 10 12 441 5 438 2.55e-100 308
Msa1336470 MtrunA17_Chr5g0445461 37.955 440 256 9 8 441 8 436 1.10e-99 306
Msa1336470 MtrunA17_Chr5g0403351 36.486 444 261 8 10 441 5 439 1.22e-99 306
Msa1336470 MtrunA17_Chr5g0445441 38.952 439 253 8 8 441 49 477 1.38e-99 308
Msa1336470 MtrunA17_Chr6g0472311 39.597 447 245 9 13 441 13 452 2.74e-99 306
Msa1336470 MtrunA17_Chr4g0058281 39.220 436 251 7 11 441 23 449 1.78e-98 304
Msa1336470 MtrunA17_Chr3g0101811 38.780 459 244 11 10 441 4 452 2.75e-98 304
Msa1336470 MtrunA17_Chr3g0101671 38.789 446 254 9 6 441 5 441 4.06e-98 303
Msa1336470 MtrunA17_Chr5g0431671 40.196 408 228 8 40 441 40 437 8.35e-98 302
Msa1336470 MtrunA17_Chr3g0094171 36.530 438 259 7 13 441 18 445 1.29e-97 302
Msa1336470 MtrunA17_Chr3g0101821 40.315 444 243 9 10 441 4 437 1.58e-97 301
Msa1336470 MtrunA17_Chr5g0445451 38.269 439 256 8 8 441 8 436 3.86e-97 300
Msa1336470 MtrunA17_Chr7g0258221 38.142 409 244 5 40 441 36 442 7.64e-97 300
Msa1336470 MtrunA17_Chr8g0372251 39.756 410 234 8 40 441 37 441 9.52e-97 299
Msa1336470 MtrunA17_Chr1g0162811 38.914 442 249 11 11 441 5 436 1.01e-96 299
Msa1336470 MtrunA17_Chr5g0431641 38.391 435 253 8 12 441 12 436 1.63e-96 298
Msa1336470 MtrunA17_Chr5g0419691 39.456 441 249 7 10 441 1 432 2.00e-96 298
Msa1336470 MtrunA17_Chr8g0344181 36.650 412 242 6 40 441 40 442 5.57e-96 298
Msa1336470 MtrunA17_Chr4g0076161 40.045 447 241 13 6 441 9 439 1.08e-95 296
Msa1336470 MtrunA17_Chr6g0463791 40.233 430 234 10 2 426 5 416 1.47e-95 296
Msa1336470 MtrunA17_Chr1g0162801 41.648 437 234 10 15 441 14 439 2.09e-95 296
Msa1336470 MtrunA17_Chr3g0116741 38.532 436 249 11 15 441 26 451 1.49e-94 294
Msa1336470 MtrunA17_Chr5g0445531 39.259 405 234 7 40 441 40 435 3.97e-94 292
Msa1336470 MtrunA17_Chr5g0405001 39.120 409 237 7 40 441 46 449 4.30e-94 293
Msa1336470 MtrunA17_Chr5g0446161 37.440 414 243 8 32 441 35 436 5.34e-94 292
Msa1336470 MtrunA17_Chr4g0011871 39.367 442 249 7 10 441 1 433 5.37e-94 292
Msa1336470 MtrunA17_Chr4g0024771 36.261 444 272 7 1 441 1 436 1.98e-93 291
Msa1336470 MtrunA17_Chr5g0446151 37.685 406 238 8 40 441 43 437 4.80e-93 290
Msa1336470 MtrunA17_Chr5g0445381 39.583 432 246 8 15 441 46 467 4.88e-93 290
Msa1336470 MtrunA17_Chr1g0167321 40.181 443 246 9 7 441 5 436 1.87e-92 288
Msa1336470 MtrunA17_Chr4g0035921 36.484 455 252 13 8 441 11 449 3.78e-92 288
Msa1336470 MtrunA17_Chr3g0101801 38.964 444 249 8 10 441 11 444 1.06e-91 286
Msa1336470 MtrunA17_Chr3g0094231 37.805 410 238 7 40 441 38 438 1.92e-91 286
Msa1336470 MtrunA17_Chr4g0011921 39.729 443 244 10 9 441 3 432 4.52e-91 284
Msa1336470 MtrunA17_Chr4g0011961 38.967 426 240 9 25 441 17 431 2.97e-90 282
Msa1336470 MtrunA17_Chr7g0218601 37.529 429 252 8 20 441 16 435 4.67e-90 282
Msa1336470 MtrunA17_Chr8g0356001 36.199 442 268 8 8 441 7 442 6.71e-90 281
Msa1336470 MtrunA17_Chr1g0174451 34.889 450 274 8 4 441 2 444 1.90e-89 281
Msa1336470 MtrunA17_Chr3g0086691 38.142 409 234 6 46 441 40 442 3.26e-89 280
Msa1336470 MtrunA17_Chr1g0156081 40.521 422 223 8 40 441 58 471 6.37e-89 280
Msa1336470 MtrunA17_Chr4g0011881 38.785 428 247 8 21 441 13 432 1.24e-88 278
Msa1336470 MtrunA17_Chr3g0101741 42.246 374 196 6 73 441 1 359 1.48e-88 276
Msa1336470 MtrunA17_Chr8g0357421 40.757 449 233 12 10 441 5 437 1.96e-88 278
Msa1336470 MtrunA17_Chr7g0218611 39.024 410 232 8 41 441 36 436 5.64e-88 276
Msa1336470 MtrunA17_Chr1g0174471 34.298 449 282 7 2 441 15 459 1.03e-87 277
Msa1336470 MtrunA17_Chr1g0174461 36.842 418 245 8 36 441 33 443 1.26e-87 276
Msa1336470 MtrunA17_Chr4g0011981 38.810 420 238 8 31 441 23 432 2.15e-87 275
Msa1336470 MtrunA17_Chr3g0084921 35.440 443 266 8 13 441 11 447 2.80e-87 275
Msa1336470 MtrunA17_Chr5g0445421 36.239 436 248 7 8 441 82 489 2.83e-87 276
Msa1336470 MtrunA17_Chr7g0254641 36.667 420 240 7 40 441 39 450 9.82e-87 274
Msa1336470 MtrunA17_Chr5g0395321 33.638 437 268 5 10 441 14 433 2.68e-86 273
Msa1336470 MtrunA17_Chr8g0357431 39.683 441 250 9 10 441 5 438 4.43e-86 272
Msa1336470 MtrunA17_Chr8g0344191 33.333 444 269 9 13 441 43 474 6.62e-86 272
Msa1336470 MtrunA17_Chr4g0011901 37.882 425 246 8 25 441 18 432 2.57e-85 270
Msa1336470 MtrunA17_Chr2g0280261 38.670 406 234 7 40 441 36 430 6.15e-85 268
Msa1336470 MtrunA17_Chr5g0395331 33.562 438 277 4 11 441 10 440 1.55e-84 268
Msa1336470 MtrunA17_Chr5g0406651 39.535 430 242 7 21 441 13 433 1.81e-84 267
Msa1336470 MtrunA17_Chr1g0174481 35.122 410 251 6 40 441 36 438 2.44e-84 267
Msa1336470 MtrunA17_Chr8g0355961 36.795 443 264 7 8 441 7 442 4.22e-84 266
Msa1336470 MtrunA17_Chr3g0086651 37.408 409 237 6 46 441 40 442 7.22e-84 266
Msa1336470 MtrunA17_Chr4g0061381 35.366 410 240 6 47 441 40 439 2.08e-83 265
Msa1336470 MtrunA17_Chr1g0174441 33.775 453 281 9 2 441 19 465 2.42e-83 265
Msa1336470 MtrunA17_Chr3g0086661 37.164 409 238 6 46 441 40 442 4.57e-83 264
Msa1336470 MtrunA17_Chr7g0235551 33.184 446 274 8 10 441 9 444 6.19e-82 261
Msa1336470 MtrunA17_Chr2g0314731 33.864 440 275 6 7 441 5 433 1.21e-80 257
Msa1336470 MtrunA17_Chr5g0395381 32.488 434 252 5 10 441 14 408 4.39e-80 255
Msa1336470 MtrunA17_Chr1g0205361 31.839 446 281 6 5 441 2 433 1.43e-79 254
Msa1336470 MtrunA17_Chr5g0431501 35.680 412 247 7 40 441 35 438 1.70e-79 254
Msa1336470 MtrunA17_Chr5g0431461 35.680 412 247 7 40 441 35 438 1.70e-79 254
Msa1336470 MtrunA17_Chr4g0030701 33.890 419 253 8 40 441 37 448 1.74e-79 255
Msa1336470 MtrunA17_Chr4g0030711 33.738 412 248 8 48 441 47 451 7.05e-79 254
Msa1336470 MtrunA17_Chr1g0200961 34.773 440 266 6 11 441 6 433 1.18e-78 252
Msa1336470 MtrunA17_Chr7g0265611 34.703 438 264 7 17 441 25 453 1.28e-78 253
Msa1336470 MtrunA17_Chr2g0314721 33.107 441 277 6 11 441 12 444 1.60e-78 252
Msa1336470 MtrunA17_Chr4g0057001 33.718 433 267 8 17 441 32 452 5.10e-78 251
Msa1336470 MtrunA17_Chr4g0039901 34.398 407 254 5 40 441 37 435 9.02e-78 250
Msa1336470 MtrunA17_Chr7g0246221 33.708 445 273 7 9 441 5 439 1.52e-77 249
Msa1336470 MtrunA17_Chr1g0160851 32.346 439 281 7 8 441 6 433 4.97e-77 248
Msa1336470 MtrunA17_Chr8g0362701 33.252 409 246 8 49 441 46 443 6.82e-77 248
Msa1336470 MtrunA17_Chr8g0339331 35.154 421 250 10 38 441 38 452 1.37e-76 248
Msa1336470 MtrunA17_Chr1g0176831 33.170 407 259 4 40 441 65 463 2.27e-76 247
Msa1336470 MtrunA17_Chr8g0339311 34.353 425 255 10 36 441 41 460 2.28e-76 247
Msa1336470 MtrunA17_Chr5g0431511 35.280 411 250 7 40 441 35 438 1.13e-75 244
Msa1336470 MtrunA17_Chr1g0164211 33.907 407 255 5 40 441 33 430 3.61e-75 243
Msa1336470 MtrunA17_Chr1g0207841 33.820 411 245 8 49 441 49 450 1.02e-74 243
Msa1336470 MtrunA17_Chr1g0156061 37.717 403 194 7 40 441 57 403 1.31e-73 238
Msa1336470 MtrunA17_Chr1g0197891 32.653 441 273 8 9 441 7 431 1.66e-73 238
Msa1336470 MtrunA17_Chr6g0451691 32.972 461 269 13 10 441 16 465 2.27e-73 239
Msa1336470 MtrunA17_Chr1g0197881 32.432 444 275 8 6 441 4 430 6.90e-73 237
Msa1336470 MtrunA17_Chr8g0362481 35.079 382 227 8 73 441 1 374 1.67e-72 234
Msa1336470 MtrunA17_Chr7g0255531 30.377 451 281 7 4 441 2 432 4.47e-72 235
Msa1336470 MtrunA17_Chr4g0056951 34.015 391 242 5 59 441 65 447 4.51e-72 236
Msa1336470 MtrunA17_Chr1g0197851 32.648 438 271 8 14 441 8 431 7.36e-72 234
Msa1336470 MtrunA17_Chr2g0304871 32.967 455 273 12 6 441 11 452 8.88e-72 235
Msa1336470 MtrunA17_Chr5g0401681 34.257 397 236 6 40 424 34 417 1.58e-71 234
Msa1336470 MtrunA17_Chr6g0451751 32.826 460 272 11 8 441 13 461 2.71e-71 234
Msa1336470 MtrunA17_Chr7g0224561 32.816 451 264 12 14 441 4 438 3.79e-71 233
Msa1336470 MtrunA17_Chr4g0052861 33.486 436 259 11 6 428 3 420 4.22e-71 233
Msa1336470 MtrunA17_Chr1g0197871 31.081 444 290 7 1 441 1 431 4.50e-71 232
Msa1336470 MtrunA17_Chr7g0246131 32.798 436 277 7 14 441 13 440 6.05e-71 232
Msa1336470 MtrunA17_Chr6g0451741 33.115 459 269 12 10 441 36 483 8.97e-71 233
Msa1336470 MtrunA17_Chr7g0224551 32.816 451 264 12 14 441 4 438 3.45e-70 231
Msa1336470 MtrunA17_Chr6g0451781 32.936 419 252 8 46 441 82 494 1.04e-69 231
Msa1336470 MtrunA17_Chr4g0052851 33.850 387 241 6 40 424 35 408 1.07e-69 229
Msa1336470 MtrunA17_Chr8g0390871 61.963 163 61 1 279 441 1 162 1.23e-69 220
Msa1336470 MtrunA17_Chr4g0008101 32.898 459 270 13 9 441 15 461 2.49e-69 229
Msa1336470 MtrunA17_Chr1g0205371 32.802 439 275 7 10 441 9 434 3.74e-69 228
Msa1336470 MtrunA17_Chr7g0246121 35.062 405 244 7 46 441 42 436 4.46e-69 227
Msa1336470 MtrunA17_Chr5g0401691 31.027 448 283 11 2 441 17 446 5.91e-69 227
Msa1336470 MtrunA17_Chr7g0258211 32.151 451 276 10 11 441 8 448 6.08e-69 227
Msa1336470 MtrunA17_Chr6g0458561 33.254 421 255 11 38 441 54 465 1.58e-68 227
Msa1336470 MtrunA17_Chr8g0351801 33.835 399 239 7 48 430 44 433 3.69e-68 226
Msa1336470 MtrunA17_Chr7g0246151 32.673 404 251 8 49 441 45 438 1.21e-67 224
Msa1336470 MtrunA17_Chr6g0451641 31.441 458 275 12 9 441 11 454 1.52e-67 224
Msa1336470 MtrunA17_Chr4g0053621 33.813 417 245 9 40 441 33 433 2.55e-67 223
Msa1336470 MtrunA17_Chr3g0082701 32.174 460 275 11 9 441 13 462 3.79e-67 223
Msa1336470 MtrunA17_Chr4g0052881 33.025 433 261 8 5 424 2 418 1.94e-66 220
Msa1336470 MtrunA17_Chr4g0046631 33.738 412 248 7 46 441 54 456 5.01e-66 220
Msa1336470 MtrunA17_Chr2g0296651 33.645 428 256 8 10 424 5 417 1.06e-65 218
Msa1336470 MtrunA17_Chr4g0017411 32.732 388 244 6 40 424 32 405 1.40e-65 218
Msa1336470 MtrunA17_Chr5g0430051 86.207 116 16 0 1 116 1 116 6.12e-64 201
Msa1336470 MtrunA17_Chr6g0466901 33.408 446 268 11 19 441 15 454 7.98e-64 214
Msa1336470 MtrunA17_Chr1g0213671 32.542 421 260 13 36 441 32 443 9.44e-64 214
Msa1336470 MtrunA17_Chr4g0039391 33.247 388 238 7 48 424 45 422 1.08e-63 213
Msa1336470 MtrunA17_Chr5g0430151 82.883 111 19 0 331 441 1 111 6.77e-63 201
Msa1336470 MtrunA17_Chr6g0451681 31.222 442 236 11 7 441 34 414 7.67e-63 211
Msa1336470 MtrunA17_Chr7g0246181 32.258 403 254 6 49 441 45 438 3.60e-61 206
Msa1336470 MtrunA17_Chr6g0466941 31.905 420 256 11 46 441 42 455 4.07e-61 207
Msa1336470 MtrunA17_Chr5g0430041 81.081 111 21 0 331 441 1 111 2.33e-60 194
Msa1336470 MtrunA17_Chr4g0046351 28.638 426 270 11 37 441 30 442 9.51e-59 201
Msa1336470 MtrunA17_Chr4g0046321 29.577 426 266 12 37 441 30 442 2.31e-58 199
Msa1336470 MtrunA17_Chr4g0046331 27.902 448 283 12 21 441 10 444 9.80e-58 198
Msa1336470 MtrunA17_Chr5g0419451 30.536 429 271 11 23 441 45 456 3.04e-56 194
Msa1336470 MtrunA17_Chr1g0200951 30.607 428 268 12 30 441 53 467 1.15e-55 192
Msa1336470 MtrunA17_Chr2g0296661 32.905 389 237 7 50 424 44 422 3.82e-55 191
Msa1336470 MtrunA17_Chr8g0346261 31.010 416 257 14 39 441 85 483 1.43e-53 187
Msa1336470 MtrunA17_Chr5g0431591 37.247 247 148 6 196 441 14 254 4.91e-50 172
Msa1336470 MtrunA17_Chr8g0370651 27.578 446 290 11 3 425 7 442 1.15e-49 176
Msa1336470 MtrunA17_Chr8g0370641 27.901 405 265 9 40 425 42 438 1.56e-48 173
Msa1336470 MtrunA17_Chr5g0445751 34.405 311 180 9 9 305 7 307 7.14e-48 166
Msa1336470 MtrunA17_Chr6g0463611 32.441 299 183 10 12 302 21 308 1.38e-47 166
Msa1336470 MtrunA17_Chr4g0011861 36.437 247 148 4 40 278 31 276 3.17e-46 162
Msa1336470 MtrunA17_Chr6g0484771 55.396 139 61 1 73 211 1 138 3.46e-46 156
Msa1336470 MtrunA17_Chr5g0432751 26.619 417 281 11 40 441 35 441 5.37e-46 166
Msa1336470 MtrunA17_Chr1g0210091 28.442 443 278 13 1 428 37 455 8.04e-46 166
Msa1336470 MtrunA17_Chr4g0030741 32.710 321 197 7 16 328 40 349 2.26e-45 161
Msa1336470 MtrunA17_Chr1g0174421 32.609 276 174 4 40 308 49 319 5.57e-45 159
Msa1336470 MtrunA17_Chr8g0377341 28.728 456 282 14 6 441 33 465 6.34e-45 164
Msa1336470 MtrunA17_Chr4g0011851 50.345 145 71 1 297 441 8 151 1.21e-44 155
Msa1336470 MtrunA17_Chr3g0107611 25.858 437 290 9 13 425 24 450 5.25e-43 158
Msa1336470 MtrunA17_Chr3g0107541 26.448 397 264 8 47 425 59 445 2.62e-42 156
Msa1336470 MtrunA17_Chr5g0402971 30.108 279 179 5 36 298 37 315 9.42e-42 150
Msa1336470 MtrunA17_Chr2g0310351 47.445 137 71 1 305 441 1 136 4.37e-41 145
Msa1336470 MtrunA17_Chr5g0446101 32.946 258 158 5 187 441 4 249 1.62e-40 147
Msa1336470 MtrunA17_Chr4g0011941 48.905 137 69 1 305 441 1 136 1.63e-40 143
Msa1336470 MtrunA17_Chr4g0058211 45.652 138 74 1 304 441 18 154 3.24e-39 140
Msa1336470 MtrunA17_Chr2g0310371 51.034 145 69 2 14 156 2 146 4.77e-39 137
Msa1336470 MtrunA17_Chr1g0198191 26.512 430 293 10 12 427 16 436 5.04e-38 144
Msa1336470 MtrunA17_Chr1g0160861 29.197 274 182 4 172 441 9 274 9.04e-38 140
Msa1336470 MtrunA17_Chr5g0409051 27.045 440 281 13 15 428 5 430 9.66e-38 143
Msa1336470 MtrunA17_Chr4g0011931 35.636 275 164 7 14 278 4 275 2.20e-37 138
Msa1336470 MtrunA17_Chr4g0046691 34.127 252 143 7 46 284 47 288 1.89e-36 135
Msa1336470 MtrunA17_Chr3g0101591 46.377 138 73 1 304 441 38 174 2.03e-35 131
Msa1336470 MtrunA17_Chr1g0207851 30.000 270 168 5 49 303 49 312 7.87e-35 132
Msa1336470 MtrunA17_Chr5g0413911 26.573 429 283 12 40 441 44 467 3.52e-34 134
Msa1336470 MtrunA17_Chr6g0477081 31.349 252 139 4 172 412 10 238 4.32e-34 127
Msa1336470 MtrunA17_Chr6g0451811 41.958 143 80 2 301 441 1 142 1.28e-33 125
Msa1336470 MtrunA17_Chr2g0280081 26.087 391 273 9 62 441 558 943 8.51e-33 131
Msa1336470 MtrunA17_Chr2g0280081 25.385 390 277 8 62 441 57 442 1.48e-27 116
Msa1336470 MtrunA17_Chr6g0463621 46.853 143 66 4 305 441 1 139 2.03e-32 122
Msa1336470 MtrunA17_Chr2g0280071 26.253 419 284 11 40 441 65 475 2.96e-32 129
Msa1336470 MtrunA17_Chr2g0280041 26.699 412 277 10 47 441 71 474 3.97e-32 128
Msa1336470 MtrunA17_Chr5g0445411 40.252 159 91 2 9 165 18 174 5.25e-32 120
Msa1336470 MtrunA17_Chr4g0074581 26.591 440 294 12 3 426 36 462 6.01e-32 127
Msa1336470 MtrunA17_Chr3g0117321 47.458 118 62 0 39 156 8 125 6.05e-32 118
Msa1336470 MtrunA17_Chr6g0451771 42.105 152 81 3 296 441 9 159 2.26e-31 120
Msa1336470 MtrunA17_Chr2g0280121 26.650 394 269 10 62 441 61 448 1.08e-30 124
Msa1336470 MtrunA17_Chr8g0364651 26.291 426 269 13 40 441 32 436 1.40e-30 123
Msa1336470 MtrunA17_Chr5g0431631 48.624 109 54 1 41 147 53 161 2.58e-30 115
Msa1336470 MtrunA17_Chr5g0445371 35.644 202 93 6 240 441 2 166 4.59e-30 117
Msa1336470 MtrunA17_Chr1g0174431 42.361 144 74 4 305 441 1 142 1.52e-29 114
Msa1336470 MtrunA17_Chr5g0445761 48.905 137 69 1 305 441 1 136 1.78e-29 114
Msa1336470 MtrunA17_Chr2g0314781 39.669 121 72 1 321 441 1 120 4.77e-29 112
Msa1336470 MtrunA17_Chr4g0046671 28.676 272 174 6 46 303 52 317 7.53e-29 115
Msa1336470 MtrunA17_Chr4g0046681 40.288 139 80 2 305 441 31 168 1.80e-28 112
Msa1336470 MtrunA17_Chr2g0334021 25.783 415 275 9 34 430 29 428 7.95e-28 115
Msa1336470 MtrunA17_Chr3g0101541 55.056 89 39 1 353 441 1 88 2.21e-27 106
Msa1336470 MtrunA17_Chr6g0451801 26.168 321 201 9 8 303 13 322 7.77e-27 110
Msa1336470 MtrunA17_Chr5g0423621 41.322 121 70 1 321 441 1 120 1.02e-26 105
Msa1336470 MtrunA17_Chr8g0387101 26.142 394 269 11 62 441 59 444 1.06e-26 112
Msa1336470 MtrunA17_Chr3g0107561 29.021 286 179 8 13 278 19 300 1.69e-25 106
Msa1336470 MtrunA17_Chr5g0445351 48.598 107 54 1 335 441 54 159 4.84e-25 102
Msa1336470 MtrunA17_Chr0c19g0493771 26.209 393 248 15 69 441 218 588 7.87e-25 107
Msa1336470 MtrunA17_Chr8g0364631 27.696 408 261 10 40 430 34 424 4.98e-23 101
Msa1336470 MtrunA17_Chr2g0310361 37.241 145 78 4 165 303 1 138 6.04e-23 94.4
Msa1336470 MtrunA17_Chr6g0451761 30.851 282 156 11 21 287 22 279 9.93e-23 97.4
Msa1336470 MtrunA17_Chr3g0117301 50.000 84 41 1 358 441 3 85 1.11e-22 92.8
Msa1336470 MtrunA17_Chr5g0402981 39.535 129 74 3 316 441 3 130 1.30e-22 95.1
Msa1336470 MtrunA17_Chr4g0046661 39.865 148 86 2 296 441 16 162 1.11e-21 93.2
Msa1336470 MtrunA17_Chr3g0105751 26.899 316 198 9 6 303 21 321 1.29e-21 96.3
Msa1336470 MtrunA17_Chr3g0135841 24.454 458 270 19 37 441 41 475 2.53e-21 96.7
Msa1336470 MtrunA17_Chr7g0248991 25.664 339 217 12 104 424 30 351 5.85e-21 94.0
Msa1336470 MtrunA17_Chr8g0372591 28.000 125 89 1 303 427 1 124 1.06e-19 85.5
Msa1336470 MtrunA17_Chr3g0107551 31.967 122 82 1 304 425 4 124 2.63e-19 86.3
Msa1336470 MtrunA17_Chr8g0351401 23.394 436 294 12 32 441 29 450 4.90e-19 89.4
Msa1336470 MtrunA17_Chr1g0151221 23.462 439 293 15 37 441 38 467 5.49e-19 89.4
Msa1336470 MtrunA17_Chr3g0116721 30.256 195 120 7 146 331 3 190 7.03e-19 84.3
Msa1336470 MtrunA17_Chr1g0204271 25.153 326 217 8 123 431 120 435 7.34e-19 89.0
Msa1336470 MtrunA17_Chr1g0176851 25.957 235 162 4 130 359 7 234 1.79e-18 84.3
Msa1336470 MtrunA17_Chr5g0445361 56.716 67 28 1 375 441 8 73 2.20e-18 81.3
Msa1336470 MtrunA17_Chr5g0445541 41.489 94 53 1 16 107 16 109 3.79e-18 80.9
Msa1336470 MtrunA17_Chr4g0046701 43.299 97 52 2 347 441 1 96 6.99e-18 80.9
Msa1336470 MtrunA17_Chr2g0314771 27.673 159 111 1 73 227 1 159 1.10e-17 80.1
Msa1336470 MtrunA17_Chr5g0445341 43.529 85 47 1 73 156 1 85 1.14e-17 77.8
Msa1336470 MtrunA17_Chr2g0280011 34.043 141 85 4 308 441 11 150 1.39e-17 81.3
Msa1336470 MtrunA17_Chr6g0449331 24.561 285 176 9 172 428 169 442 1.52e-17 84.7
Msa1336470 MtrunA17_Chr1g0179811 25.707 389 259 14 68 441 107 480 1.91e-17 84.7
Msa1336470 MtrunA17_Chr3g0116731 52.941 68 31 1 357 424 2 68 2.67e-17 78.2
Msa1336470 MtrunA17_Chr2g0280061 34.752 141 84 4 308 441 11 150 2.99e-17 80.1
Msa1336470 MtrunA17_Chr8g0351461 24.558 452 284 17 10 425 3 433 3.01e-17 84.0
Msa1336470 MtrunA17_Chr8g0351391 28.638 213 128 7 234 434 243 443 4.62e-17 83.2
Msa1336470 MtrunA17_Chr3g0105761 33.051 118 76 2 306 423 1 115 4.94e-17 79.7
Msa1336470 MtrunA17_Chr4g0076181 46.753 77 41 0 73 149 1 77 5.03e-17 78.2
Msa1336470 MtrunA17_Chr8g0351421 24.834 451 285 15 6 425 7 434 5.77e-17 83.2
Msa1336470 MtrunA17_Chr6g0449361 24.306 288 184 8 161 428 157 430 1.95e-16 81.3
Msa1336470 MtrunA17_Chr5g0396521 29.126 206 120 6 232 430 292 478 4.11e-16 80.5
Msa1336470 MtrunA17_Chr7g0225531 26.374 455 273 19 4 424 5 431 4.43e-16 80.5
Msa1336470 MtrunA17_Chr6g0449351 24.516 310 198 10 141 428 95 390 5.76e-16 79.7
Msa1336470 MtrunA17_Chr6g0449341 24.113 282 183 7 171 428 216 490 1.27e-15 79.0
Msa1336470 MtrunA17_Chr6g0449381 23.934 422 261 16 46 428 32 432 1.35e-15 79.0
Msa1336470 MtrunA17_Chr5g0431601 44.578 83 45 1 73 155 1 82 1.91e-15 71.2
Msa1336470 MtrunA17_Chr8g0351441 22.965 344 219 9 127 441 123 449 4.88e-15 77.0
Msa1336470 MtrunA17_Chr1g0163451 24.465 327 204 9 130 428 140 451 4.97e-15 77.0
Msa1336470 MtrunA17_Chr8g0351311 27.317 205 128 5 234 427 243 437 7.03e-15 76.6
Msa1336470 MtrunA17_Chr8g0381571 28.780 205 123 7 230 426 231 420 7.83e-15 76.3
Msa1336470 MtrunA17_Chr5g0444981 36.719 128 79 2 314 441 20 145 8.06e-15 73.6
Msa1336470 MtrunA17_Chr3g0086681 40.426 94 51 2 352 441 12 104 8.10e-15 72.4
Msa1336470 MtrunA17_Chr1g0163281 25.359 209 138 4 226 428 250 446 1.17e-14 75.9
Msa1336470 MtrunA17_Chr8g0381541 28.780 205 123 7 230 426 231 420 1.34e-14 75.9
Msa1336470 MtrunA17_Chr4g0076171 37.795 127 51 4 321 441 1 105 1.90e-14 71.2
Msa1336470 MtrunA17_Chr4g0028321 46.479 71 36 2 372 441 24 93 2.30e-14 70.9
Msa1336470 MtrunA17_Chr2g0280001 30.872 149 98 3 40 184 65 212 3.13e-14 71.6
Msa1336470 MtrunA17_Chr4g0004481 25.121 207 137 4 226 428 227 419 3.63e-14 74.3
Msa1336470 MtrunA17_Chr3g0119681 23.653 427 277 13 42 439 40 446 5.12e-14 73.9
Msa1336470 MtrunA17_Chr2g0293411 24.773 440 266 18 10 424 17 416 6.55e-14 73.6
Msa1336470 MtrunA17_Chr1g0163431 21.751 354 232 9 102 428 56 391 7.22e-14 73.2
Msa1336470 MtrunA17_Chr1g0203151 26.407 231 155 7 215 441 233 452 9.31e-14 73.2
Msa1336470 MtrunA17_Chr1g0163421 27.962 211 134 5 226 428 267 467 1.07e-13 73.2
Msa1336470 MtrunA17_Chr5g0429651 27.053 207 129 6 242 437 243 438 1.38e-13 72.8
Msa1336470 MtrunA17_Chr1g0203141 25.541 231 157 6 215 441 237 456 1.80e-13 72.4
Msa1336470 MtrunA17_Chr6g0472221 23.096 394 263 17 64 441 98 467 3.60e-13 71.2
Msa1336470 MtrunA17_Chr4g0038271 25.123 203 137 2 234 425 287 485 3.73e-13 71.2
Msa1336470 MtrunA17_Chr2g0313831 23.324 373 261 14 63 426 86 442 4.39e-13 71.2
Msa1336470 MtrunA17_Chr1g0164321 24.658 219 140 5 234 434 269 480 7.20e-13 70.5
Msa1336470 MtrunA17_Chr4g0063221 21.630 319 239 5 127 441 149 460 7.57e-13 70.5
Msa1336470 MtrunA17_Chr2g0280051 26.667 195 133 5 40 225 75 268 9.71e-13 68.9
Msa1336470 MtrunA17_Chr6g0479681 25.688 218 140 5 239 441 260 470 1.28e-12 69.7
Msa1336470 MtrunA17_Chr8g0348751 23.434 431 274 15 33 425 21 433 1.48e-12 69.3
Msa1336470 MtrunA17_Chr7g0227291 23.891 293 190 7 153 428 145 421 2.41e-12 68.6
Msa1336470 MtrunA17_Chr7g0227281 24.479 192 131 3 241 428 240 421 3.12e-12 68.2
Msa1336470 MtrunA17_Chr8g0380501 22.623 305 194 8 146 428 134 418 3.64e-12 68.2
Msa1336470 MtrunA17_Chr6g0484781 53.333 60 24 2 10 69 12 67 7.20e-12 60.8
Msa1336470 MtrunA17_Chr6g0472171 35.632 87 55 1 355 441 14 99 7.38e-12 63.5
Msa1336470 MtrunA17_Chr4g0056981 40.278 72 43 0 331 402 1 72 8.35e-12 60.8
Msa1336470 MtrunA17_Chr1g0183611 22.096 353 230 10 105 428 16 352 1.19e-11 66.2
Msa1336470 MtrunA17_Chr1g0184421 27.211 147 98 3 294 435 294 436 1.28e-11 66.6
Msa1336470 MtrunA17_Chr1g0182861 38.750 80 48 1 362 441 26 104 1.44e-11 62.8
Msa1336470 MtrunA17_Chr7g0260831 21.090 422 283 14 29 426 26 421 1.56e-11 66.2
Msa1336470 MtrunA17_Chr2g0313791 22.368 456 292 17 7 424 4 435 1.72e-11 66.2
Msa1336470 MtrunA17_Chr1g0184461 27.211 147 98 3 294 435 294 436 3.68e-11 65.1
Msa1336470 MtrunA17_Chr1g0176861 44.318 88 47 1 8 95 9 94 3.76e-11 59.7
Msa1336470 MtrunA17_Chr8g0372341 29.126 206 130 8 3 196 7 208 4.70e-11 62.4
Msa1336470 MtrunA17_Chr1g0163461 23.457 324 211 8 130 428 135 446 7.96e-11 63.9
Msa1336470 MtrunA17_Chr7g0260821 26.708 161 101 4 267 426 278 422 9.59e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336470 AT3G48270.1 38.391 435 252 7 10 441 3 424 9.65e-107 325
Msa1336470 AT3G26310.1 40.952 420 230 8 28 441 25 432 2.69e-106 324
Msa1336470 AT3G26330.1 40.436 413 231 8 36 441 29 433 1.38e-104 320
Msa1336470 AT3G48280.1 37.644 433 259 4 10 441 2 424 5.53e-102 313
Msa1336470 AT3G26320.1 39.302 430 239 9 22 441 16 433 1.44e-101 312
Msa1336470 AT3G48300.1 39.518 415 237 6 28 441 21 422 1.75e-101 311
Msa1336470 AT3G48300.2 39.518 415 237 6 28 441 23 424 1.86e-101 311
Msa1336470 AT3G48310.1 39.401 401 231 5 42 441 36 425 2.15e-101 311
Msa1336470 AT3G26300.1 38.549 441 254 7 9 441 2 433 1.51e-100 309
Msa1336470 AT3G48290.1 39.604 404 230 6 40 441 35 426 1.40e-99 306
Msa1336470 AT5G57260.1 39.713 418 229 11 37 441 29 436 1.53e-99 306
Msa1336470 AT3G48320.1 38.851 435 252 6 9 441 3 425 3.22e-99 305
Msa1336470 AT4G13310.1 38.971 408 235 6 40 441 34 433 8.63e-99 305
Msa1336470 AT2G30770.1 37.838 407 239 6 40 441 35 432 1.66e-98 304
Msa1336470 AT5G07990.1 36.854 445 265 8 6 441 1 438 2.63e-95 296
Msa1336470 AT1G13080.1 40.135 446 247 9 7 441 1 437 6.57e-95 295
Msa1336470 AT3G48290.2 37.209 430 230 7 40 441 35 452 1.11e-93 292
Msa1336470 AT3G26150.1 36.889 450 251 11 9 441 4 437 4.52e-93 290
Msa1336470 AT3G26210.1 39.206 403 233 7 46 441 39 436 5.33e-93 290
Msa1336470 AT4G13290.1 37.745 408 232 7 40 441 35 426 2.26e-92 288
Msa1336470 AT3G26160.1 37.981 416 234 11 40 441 32 437 5.39e-92 287
Msa1336470 AT3G26280.1 39.379 419 224 10 40 441 34 439 6.84e-92 287
Msa1336470 AT3G26280.2 39.379 419 224 10 40 441 51 456 1.00e-91 287
Msa1336470 AT3G26270.1 39.078 412 234 9 40 441 34 438 1.08e-91 286
Msa1336470 AT3G26180.1 37.277 448 252 11 9 441 4 437 1.26e-91 286
Msa1336470 AT2G24180.1 39.024 410 234 8 40 441 38 439 1.52e-91 286
Msa1336470 AT3G26290.2 39.474 418 240 6 30 441 36 446 8.23e-91 285
Msa1336470 AT3G26290.1 39.474 418 240 6 30 441 23 433 8.86e-91 284
Msa1336470 AT3G26170.1 37.831 415 236 9 40 441 32 437 1.35e-90 284
Msa1336470 AT5G06900.1 38.072 415 234 8 40 440 36 441 1.68e-90 283
Msa1336470 AT1G13110.1 36.341 410 249 7 40 441 34 439 1.80e-90 283
Msa1336470 AT5G25140.1 36.758 438 259 9 11 441 3 429 4.27e-90 282
Msa1336470 AT5G24950.1 35.135 407 251 5 40 441 34 432 7.07e-90 281
Msa1336470 AT1G11610.1 36.855 407 243 5 40 441 35 432 1.93e-89 280
Msa1336470 AT1G11610.2 36.855 407 243 5 40 441 35 432 2.86e-89 280
Msa1336470 AT2G30750.1 39.312 407 233 5 40 441 35 432 9.53e-89 279
Msa1336470 AT4G13770.1 36.534 427 253 7 25 441 17 435 2.05e-88 278
Msa1336470 AT4G31500.1 36.562 413 242 9 40 441 31 434 3.10e-87 275
Msa1336470 AT5G25120.1 35.927 437 264 9 11 441 3 429 2.36e-86 273
Msa1336470 AT2G02580.1 39.140 442 253 8 7 441 1 433 7.73e-86 271
Msa1336470 AT3G26190.1 38.350 412 237 9 40 441 30 434 5.75e-85 269
Msa1336470 AT1G13090.2 36.010 411 247 7 40 441 30 433 2.90e-84 267
Msa1336470 AT5G42590.1 35.973 442 263 6 6 441 5 432 9.77e-84 266
Msa1336470 AT2G45560.1 34.368 451 273 8 5 441 2 443 1.65e-83 266
Msa1336470 AT2G45550.1 35.242 454 265 12 5 441 2 443 2.41e-83 265
Msa1336470 AT3G53280.1 37.408 409 243 8 40 441 30 432 7.20e-82 261
Msa1336470 AT4G36220.1 36.496 411 239 9 46 441 48 451 7.55e-82 261
Msa1336470 AT3G26200.1 38.107 412 238 8 40 441 30 434 9.39e-82 261
Msa1336470 AT5G25180.1 35.185 432 256 8 21 441 11 429 1.14e-81 260
Msa1336470 AT5G25130.1 35.240 437 267 8 11 441 3 429 2.51e-81 259
Msa1336470 AT5G24960.1 37.990 408 238 6 40 441 35 433 4.13e-81 259
Msa1336470 AT1G01280.1 36.598 388 228 5 47 423 41 421 1.97e-80 258
Msa1336470 AT2G45570.1 33.991 456 269 9 5 441 2 444 2.12e-79 255
Msa1336470 AT3G26230.1 37.772 413 241 7 40 441 28 435 4.02e-79 254
Msa1336470 AT4G20240.1 35.354 396 243 5 40 431 35 421 4.17e-79 252
Msa1336470 AT3G26830.1 34.685 444 270 10 7 441 1 433 8.01e-79 253
Msa1336470 AT4G13310.2 37.260 365 215 6 40 398 34 390 1.26e-78 249
Msa1336470 AT2G42250.1 35.556 450 264 10 6 441 12 449 1.55e-78 253
Msa1336470 AT3G44250.1 37.379 412 240 9 40 441 30 433 1.90e-78 252
Msa1336470 AT4G31940.1 34.651 430 247 9 40 441 33 456 1.99e-77 250
Msa1336470 AT3G61040.1 35.437 412 248 7 37 441 32 432 7.44e-77 248
Msa1336470 AT3G26220.1 37.808 447 257 9 7 441 1 438 9.31e-77 248
Msa1336470 AT1G33720.1 32.751 458 271 9 5 441 2 443 1.12e-76 248
Msa1336470 AT4G12320.1 32.880 441 275 7 10 441 21 449 1.41e-76 248
Msa1336470 AT4G12300.1 32.488 434 274 6 15 441 26 447 3.60e-76 246
Msa1336470 AT4G31970.1 34.426 427 251 8 40 441 33 455 3.43e-75 244
Msa1336470 AT5G04330.1 35.749 414 247 10 40 441 34 440 4.36e-75 244
Msa1336470 AT4G12330.1 33.911 404 249 5 47 441 55 449 1.94e-74 242
Msa1336470 AT1G13100.1 33.824 408 244 10 48 441 38 433 2.67e-74 241
Msa1336470 AT5G44620.1 33.747 403 252 6 47 441 55 450 3.42e-74 241
Msa1336470 AT3G53300.1 36.058 416 248 9 37 441 26 434 3.30e-73 238
Msa1336470 AT4G22710.1 31.841 402 260 5 47 441 62 456 1.60e-72 237
Msa1336470 AT4G37340.1 33.716 436 256 11 1 424 1 415 4.56e-72 235
Msa1336470 AT4G22690.1 31.592 402 261 5 47 441 93 487 1.14e-71 236
Msa1336470 AT3G20940.1 33.971 418 250 11 19 425 25 427 1.83e-70 232
Msa1336470 AT4G37430.1 32.258 434 260 12 10 426 1 417 2.30e-70 231
Msa1336470 AT3G20950.1 32.967 455 269 14 1 437 4 440 8.99e-70 230
Msa1336470 AT5G06905.1 31.435 439 277 10 8 434 6 432 2.18e-69 229
Msa1336470 AT4G12310.1 33.086 405 255 6 47 441 53 451 2.61e-69 229
Msa1336470 AT2G14100.1 33.911 404 245 9 49 441 54 446 4.69e-69 228
Msa1336470 AT4G37410.1 34.507 426 248 14 10 424 7 412 5.81e-69 227
Msa1336470 AT4G37310.1 34.862 436 254 12 5 424 2 423 6.86e-69 228
Msa1336470 AT2G40890.1 30.383 418 268 5 36 441 25 431 1.79e-68 226
Msa1336470 AT3G32047.1 34.406 404 242 10 49 441 53 444 1.00e-67 224
Msa1336470 AT4G37320.1 32.886 447 258 12 10 441 8 427 1.16e-67 224
Msa1336470 AT4G31950.1 33.693 463 260 12 7 441 1 444 1.75e-67 224
Msa1336470 AT4G20240.2 35.342 365 223 5 40 400 35 390 2.37e-67 220
Msa1336470 AT5G57220.1 33.092 414 249 10 40 440 32 430 2.60e-67 223
Msa1336470 AT5G67310.1 32.570 393 247 10 40 424 44 426 3.06e-67 223
Msa1336470 AT5G36220.1 34.803 431 239 12 11 424 16 421 1.15e-66 221
Msa1336470 AT3G25180.1 31.236 445 277 9 15 441 12 445 5.02e-66 220
Msa1336470 AT4G37400.1 33.760 391 226 10 47 424 40 410 1.58e-65 218
Msa1336470 AT4G15330.1 32.864 426 264 9 6 425 13 422 2.43e-65 218
Msa1336470 AT3G20110.1 32.941 425 266 9 10 428 15 426 2.52e-65 218
Msa1336470 AT4G37330.1 33.718 433 246 12 7 424 6 412 4.09e-65 217
Msa1336470 AT3G20140.1 33.673 392 245 8 40 425 44 426 5.27e-65 217
Msa1336470 AT2G45580.1 31.436 404 260 7 48 441 48 444 5.71e-65 217
Msa1336470 AT2G25160.1 31.590 459 283 12 5 441 2 451 3.24e-64 216
Msa1336470 AT1G50520.1 32.944 428 268 9 6 425 13 429 8.71e-64 214
Msa1336470 AT5G24960.2 36.512 367 218 6 40 400 35 392 1.13e-63 211
Msa1336470 AT5G35715.1 32.718 379 238 8 73 441 1 372 6.10e-63 210
Msa1336470 AT2G23190.1 32.658 444 260 13 5 430 43 465 3.40e-62 211
Msa1336470 AT3G20130.1 31.738 397 250 9 49 437 53 436 8.88e-62 209
Msa1336470 AT4G15360.1 31.840 424 272 7 10 425 12 426 1.12e-61 209
Msa1336470 AT3G20090.2 33.793 435 263 11 14 437 18 438 1.87e-61 208
Msa1336470 AT3G28740.1 35.012 417 241 10 40 440 41 443 2.80e-61 207
Msa1336470 AT2G05180.1 33.100 429 273 8 3 425 6 426 3.30e-61 205
Msa1336470 AT5G10610.1 30.260 423 274 7 11 424 4 414 6.18e-61 206
Msa1336470 AT1G50560.1 35.023 434 252 12 6 425 13 430 1.02e-60 206
Msa1336470 AT4G37370.1 32.265 437 260 13 1 424 1 414 1.57e-60 205
Msa1336470 AT4G15350.1 33.838 396 245 9 49 437 45 430 2.99e-60 204
Msa1336470 AT3G20100.1 31.651 436 277 11 1 425 1 426 4.32e-60 204
Msa1336470 AT4G37360.1 31.323 431 257 13 13 424 5 415 5.75e-60 204
Msa1336470 AT5G10600.1 30.660 424 269 8 10 424 23 430 1.44e-59 203
Msa1336470 AT3G61040.2 32.976 373 233 6 37 402 32 394 1.90e-59 199
Msa1336470 AT3G52970.1 31.981 419 261 13 40 441 38 449 8.57e-59 201
Msa1336470 AT3G20120.4 32.110 436 270 10 4 425 2 425 9.55e-58 198
Msa1336470 AT5G47990.1 31.486 397 251 9 49 437 53 436 9.86e-58 198
Msa1336470 AT3G52970.2 30.716 433 262 12 40 441 38 463 2.10e-57 197
Msa1336470 AT2G23220.1 33.002 403 244 10 40 430 48 436 2.62e-57 197
Msa1336470 AT1G74550.1 30.508 413 253 10 40 441 29 418 4.81e-57 196
Msa1336470 AT5G42580.1 31.250 368 237 5 58 425 60 411 2.14e-56 194
Msa1336470 AT3G20080.2 32.692 416 248 10 25 425 29 427 7.26e-56 193
Msa1336470 AT3G20080.1 32.692 416 248 10 25 425 29 427 7.26e-56 193
Msa1336470 AT3G61880.1 30.275 436 263 14 24 441 55 467 3.99e-55 191
Msa1336470 AT3G61880.2 30.275 436 263 14 24 441 55 467 8.53e-55 191
Msa1336470 AT1G28430.1 31.448 442 281 12 1 434 4 431 1.55e-53 187
Msa1336470 AT5G09970.1 33.179 431 250 20 31 441 62 474 2.22e-53 187
Msa1336470 AT2G27000.1 31.234 381 245 6 52 425 54 424 1.41e-52 184
Msa1336470 AT2G46660.1 29.976 417 258 14 39 441 71 467 2.88e-52 184
Msa1336470 AT4G15330.2 30.751 426 245 10 6 425 13 394 4.16e-52 182
Msa1336470 AT2G25160.2 30.923 401 251 9 5 387 2 394 2.16e-51 179
Msa1336470 AT1G74110.1 30.330 455 266 15 18 441 43 477 6.52e-51 180
Msa1336470 AT1G13080.2 35.117 299 177 7 153 441 28 319 1.04e-50 176
Msa1336470 AT3G20960.2 31.565 377 243 8 63 434 67 433 2.83e-50 178
Msa1336470 AT1G74540.1 27.488 422 260 8 40 441 29 424 6.10e-50 177
Msa1336470 AT1G66540.1 33.648 318 181 9 121 424 1 302 8.85e-50 174
Msa1336470 AT3G25180.2 30.000 370 234 7 39 393 39 398 1.88e-49 173
Msa1336470 AT1G33730.1 32.154 311 194 5 140 441 5 307 2.75e-49 172
Msa1336470 AT1G33730.2 32.154 311 194 5 140 441 5 307 2.75e-49 172
Msa1336470 AT1G33720.4 32.288 319 197 6 133 441 2 311 6.53e-49 171
Msa1336470 AT1G33720.3 32.288 319 197 6 133 441 2 311 6.53e-49 171
Msa1336470 AT1G33720.5 32.288 319 197 6 133 441 2 311 6.53e-49 171
Msa1336470 AT4G15380.1 30.769 364 242 7 63 425 68 422 9.31e-49 174
Msa1336470 AT1G01190.2 28.442 443 268 16 20 441 60 474 1.41e-48 174
Msa1336470 AT2G22330.1 27.397 438 294 9 6 427 27 456 1.53e-48 174
Msa1336470 AT1G01190.1 28.442 443 268 16 20 441 55 469 1.57e-48 174
Msa1336470 AT2G22330.2 27.397 438 294 9 6 427 50 479 2.36e-48 174
Msa1336470 AT4G39950.1 27.376 442 296 9 2 427 22 454 3.42e-48 173
Msa1336470 AT1G58260.1 27.635 427 270 11 23 426 27 437 5.18e-48 172
Msa1336470 AT1G13710.1 29.009 424 255 15 39 441 54 452 6.01e-48 172
Msa1336470 AT4G39950.2 27.376 442 296 9 2 427 62 494 6.23e-48 173
Msa1336470 AT3G20130.2 29.219 397 232 10 49 437 53 408 9.10e-48 171
Msa1336470 AT2G45580.3 28.532 361 242 6 48 398 48 402 3.76e-47 167
Msa1336470 AT5G05260.2 27.696 408 266 9 40 425 42 442 3.20e-46 167
Msa1336470 AT1G79370.1 28.235 425 260 10 37 425 38 453 4.57e-46 167
Msa1336470 AT1G33720.2 29.970 337 206 8 133 441 2 336 1.13e-43 158
Msa1336470 AT2G30490.1 28.362 409 265 11 49 441 44 440 8.56e-43 157
Msa1336470 AT3G26180.2 39.524 210 114 7 236 441 103 303 1.23e-42 154
Msa1336470 AT3G26180.2 42.609 115 59 2 9 121 4 113 7.82e-21 94.0
Msa1336470 AT5G05260.1 27.027 407 238 9 40 425 42 410 1.70e-42 157
Msa1336470 AT2G27010.1 29.793 386 226 11 52 425 50 402 5.54e-41 152
Msa1336470 AT1G66540.2 35.135 259 141 8 177 424 1 243 2.51e-40 147
Msa1336470 AT2G45580.2 30.508 295 188 7 157 441 3 290 4.92e-40 147
Msa1336470 AT3G20120.2 30.745 322 198 8 133 441 1 310 4.84e-38 142
Msa1336470 AT3G20120.3 30.745 322 198 8 133 441 1 310 4.84e-38 142
Msa1336470 AT3G20120.1 30.745 322 198 8 133 441 1 310 4.84e-38 142
Msa1336470 AT3G20960.1 30.861 337 218 8 103 434 4 330 5.17e-38 143
Msa1336470 AT5G35917.1 25.537 419 264 11 40 432 44 440 5.43e-38 144
Msa1336470 AT5G36220.2 35.907 259 144 6 174 424 31 275 1.20e-37 140
Msa1336470 AT3G53290.1 30.495 364 213 8 88 441 8 341 5.47e-37 140
Msa1336470 AT3G10560.1 27.924 419 276 11 22 428 30 434 6.16e-37 142
Msa1336470 AT2G45560.2 30.420 286 185 5 5 276 2 287 7.04e-37 137
Msa1336470 AT1G16400.1 25.113 442 294 10 10 425 14 444 1.34e-36 141
Msa1336470 AT5G04630.1 27.610 431 282 12 9 425 13 427 2.86e-36 140
Msa1336470 AT1G13090.1 32.400 250 157 3 40 281 30 275 8.63e-36 134
Msa1336470 AT3G20090.1 31.847 314 191 9 133 437 1 300 9.28e-36 136
Msa1336470 AT3G20080.4 31.596 307 179 9 133 425 1 290 2.93e-34 132
Msa1336470 AT3G20080.5 31.596 307 179 9 133 425 1 290 2.93e-34 132
Msa1336470 AT3G20080.6 31.596 307 179 9 133 425 1 290 2.93e-34 132
Msa1336470 AT3G20080.3 31.596 307 179 9 133 425 1 290 2.93e-34 132
Msa1336470 AT2G45560.3 30.962 239 155 4 5 233 2 240 1.80e-33 126
Msa1336470 AT3G20935.1 33.462 260 139 8 192 425 1 252 2.98e-33 128
Msa1336470 AT4G20235.1 32.800 250 137 5 17 257 7 234 7.22e-33 127
Msa1336470 AT1G16410.1 24.079 407 280 8 40 425 47 445 4.59e-32 128
Msa1336470 AT5G04660.1 25.538 372 258 8 63 425 69 430 9.28e-32 127
Msa1336470 AT3G10570.1 27.487 382 259 10 55 428 63 434 1.51e-31 126
Msa1336470 AT1G64940.1 25.814 430 274 13 40 441 35 447 1.54e-31 126
Msa1336470 AT1G11600.1 28.678 401 261 12 40 425 37 427 3.68e-31 125
Msa1336470 AT3G03470.1 23.799 437 304 11 7 426 3 427 2.14e-29 120
Msa1336470 AT5G25900.1 25.000 404 269 10 39 426 47 432 8.53e-29 119
Msa1336470 AT1G16410.2 24.064 374 256 7 40 392 47 413 2.69e-28 116
Msa1336470 AT1G64950.1 25.240 416 294 10 40 441 34 446 1.81e-27 115
Msa1336470 AT2G12190.1 25.871 402 282 9 40 428 34 432 3.00e-26 111
Msa1336470 AT1G64930.1 24.755 408 278 10 40 428 34 431 7.43e-26 110
Msa1336470 AT5G61320.1 24.165 389 266 10 62 441 58 426 2.67e-22 99.8
Msa1336470 AT3G53130.1 26.753 385 260 15 68 441 107 480 6.15e-22 98.6
Msa1336470 AT1G31800.1 25.758 396 246 15 69 441 139 509 1.20e-21 98.2
Msa1336470 AT1G64900.1 24.619 394 282 10 45 428 38 426 1.38e-18 88.6
Msa1336470 AT5G52320.2 28.571 210 124 7 226 425 233 426 1.30e-17 85.5
Msa1336470 AT5G52320.1 28.571 210 124 7 226 425 233 426 1.45e-17 85.5
Msa1336470 AT3G53305.1 30.909 165 103 3 73 227 1 164 3.30e-17 82.8
Msa1336470 AT3G53305.1 37.241 145 71 5 303 441 137 267 2.67e-13 71.2
Msa1336470 AT2G45510.1 23.514 387 249 13 83 441 81 448 7.89e-17 83.2
Msa1336470 AT1G65340.1 27.273 198 131 5 234 425 237 427 1.26e-16 82.4
Msa1336470 AT3G56630.1 24.697 413 265 16 41 427 30 422 1.32e-16 82.4
Msa1336470 AT1G34540.1 26.555 418 251 19 41 427 30 422 1.46e-16 82.0
Msa1336470 AT1G57750.2 22.444 450 294 19 1 425 1 420 1.67e-15 78.6
Msa1336470 AT1G57750.1 22.444 450 294 19 1 425 1 420 2.19e-15 78.6
Msa1336470 AT2G44890.2 23.014 365 242 10 83 425 81 428 5.70e-15 77.4
Msa1336470 AT2G44890.1 22.775 382 258 11 83 441 81 448 6.07e-15 77.4
Msa1336470 AT1G19630.2 25.189 397 256 13 40 424 37 404 6.38e-15 77.0
Msa1336470 AT1G19630.3 25.189 397 256 13 40 424 37 404 8.37e-15 76.6
Msa1336470 AT1G19630.1 24.826 431 281 14 6 424 5 404 1.19e-14 76.3
Msa1336470 AT4G19230.1 23.474 426 279 13 9 424 4 392 2.43e-14 75.1
Msa1336470 AT4G19230.2 23.474 426 279 13 9 424 4 392 3.13e-14 75.1
Msa1336470 AT3G26125.1 24.123 228 156 5 230 441 247 473 1.62e-13 72.8
Msa1336470 AT2G26710.1 23.438 320 228 9 127 441 149 456 1.68e-13 72.8
Msa1336470 AT5G63450.1 24.155 414 265 14 42 431 38 426 1.89e-13 72.8
Msa1336470 AT5G63450.2 23.736 455 295 17 2 431 57 484 1.94e-13 72.8
Msa1336470 AT4G15110.1 26.531 196 128 6 244 428 294 484 3.97e-13 71.6
Msa1336470 AT2G21910.1 24.766 214 152 5 226 435 231 439 6.93e-13 70.9
Msa1336470 AT1G47620.1 24.458 323 206 12 130 427 132 441 1.04e-12 70.5
Msa1336470 AT1G13140.2 29.927 137 87 3 298 425 287 423 1.14e-12 70.1
Msa1336470 AT1G13140.1 29.927 137 87 3 298 425 313 449 1.43e-12 70.1
Msa1336470 AT1G24540.1 25.989 177 115 5 263 425 271 445 2.71e-12 68.9
Msa1336470 AT1G13150.1 26.064 188 126 5 267 441 271 458 4.42e-12 68.6
Msa1336470 AT5G24910.1 22.823 333 223 11 127 441 157 473 4.64e-12 68.2
Msa1336470 AT3G14680.1 23.797 395 268 17 57 441 82 453 1.59e-11 66.6
Msa1336470 AT2G32440.2 22.248 436 291 14 10 424 8 416 1.99e-11 66.2
Msa1336470 AT2G32440.1 22.248 436 291 14 10 424 8 416 1.99e-11 66.2
Msa1336470 AT2G27690.1 22.513 382 257 12 68 431 61 421 3.67e-11 65.5
Msa1336470 AT5G08250.2 23.188 207 137 4 234 425 264 463 4.16e-11 65.5
Msa1336470 AT4G39490.1 24.667 150 100 1 294 430 296 445 4.18e-11 65.5
Msa1336470 AT5G08250.1 23.188 207 137 4 234 425 202 401 4.36e-11 65.1
Msa1336470 AT5G02900.1 22.256 328 223 9 123 427 86 404 4.37e-11 65.1
Msa1336470 AT5G52400.1 29.851 134 81 4 308 432 329 458 4.78e-11 65.1
Msa1336470 AT2G23180.1 19.858 282 211 5 161 427 157 438 6.59e-11 64.7
Msa1336470 AT4G39510.1 22.866 328 222 11 121 427 114 431 9.94e-11 63.9

Find 72 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGAAGATTTCCGATTAT+TGG 0.234535 tig0001216:+2114 Msa1336470:intergenic
TTTCTGAGTATGGTCCTTAT+TGG 0.276407 tig0001216:-1882 Msa1336470:CDS
GAAGGAGAAGTTGGATGTTT+TGG 0.283479 tig0001216:-1788 Msa1336470:CDS
TAAAGCCCTCGATGAGGTTT+TGG 0.289305 tig0001216:-583 Msa1336470:CDS
CCGATTATTGGTAGTGTTGA+TGG 0.296777 tig0001216:+2126 Msa1336470:intergenic
CATGTCTATAATTGAAGTTT+TGG 0.297438 tig0001216:+2269 Msa1336470:intergenic
TTCCTCACATTACGCCAATA+AGG 0.323660 tig0001216:+1868 Msa1336470:intergenic
GGGCTTTATCTGAACTTCTA+AGG 0.336218 tig0001216:-356 Msa1336470:CDS
TTGAGATGTTTGGTCCTATT+AGG 0.337546 tig0001216:-1810 Msa1336470:CDS
GAAGATGAAATGATAATAGT+TGG 0.344929 tig0001216:+2009 Msa1336470:intergenic
TATTGTGTATAAGATGATAC+TGG 0.351459 tig0001216:-1689 Msa1336470:CDS
GAAGTTTAATTACTTAGATA+TGG 0.357625 tig0001216:-250 Msa1336470:CDS
TCCAACTTCTCCTTCCTAAT+AGG 0.359982 tig0001216:+1796 Msa1336470:intergenic
TCTAGAAGCATTGGCTTTGA+TGG 0.361624 tig0001216:-1626 Msa1336470:CDS
ATCTTTGAAGAAAGTTGCTT+TGG 0.370392 tig0001216:-1761 Msa1336470:CDS
ATAGTAAATGCATGGGCTAT+AGG 0.377235 tig0001216:-117 Msa1336470:CDS
AGAGAGAGCATAACAATTGA+TGG 0.397506 tig0001216:-168 Msa1336470:CDS
ACTAGTAGTGTGTTTGTTTG+TGG 0.400070 tig0001216:+2350 Msa1336470:intergenic
GCTTCAAAAGTTGAGATGTT+TGG 0.406477 tig0001216:-1820 Msa1336470:CDS
ATGGTATGAGTGGTGGTTGG+TGG 0.409075 tig0001216:+2373 Msa1336470:intergenic
ACCTTAAGACTTTATCCTGT+TGG 0.410543 tig0001216:-216 Msa1336470:CDS
ATCGGAAATCTTCACATGTT+AGG 0.421074 tig0001216:-2108 Msa1336470:CDS
TAGGGAGAGATTCTAATGTT+TGG 0.422188 tig0001216:-98 Msa1336470:CDS
CCATCAACACTACCAATAAT+CGG 0.427865 tig0001216:-2126 Msa1336470:CDS
TGTCGAGGGTGAACAAAATA+TGG 0.431018 tig0001216:-460 Msa1336470:CDS
GAGTTTGAATCTATACCATT+TGG 0.432998 tig0001216:-9 None:intergenic
TAGTAAATGCATGGGCTATA+GGG 0.447100 tig0001216:-116 Msa1336470:CDS
TAAGTTAGTTCTAGAAGCAT+TGG 0.448838 tig0001216:-1635 Msa1336470:CDS
TGGTATGAGTGGTGGTTGGT+GGG 0.450336 tig0001216:+2374 Msa1336470:intergenic
TCCTATTAGGAAGGAGAAGT+TGG 0.460020 tig0001216:-1797 Msa1336470:CDS
CCAAGTTGTAATGACATGAT+TGG 0.470324 tig0001216:+2039 Msa1336470:intergenic
CTAGAAGCATTGGCTTTGAT+GGG 0.476422 tig0001216:-1625 Msa1336470:CDS
TAAGAGAATGGTTAAAGAGA+AGG 0.485901 tig0001216:-280 Msa1336470:CDS
TGGATGGTATGAGTGGTGGT+TGG 0.486556 tig0001216:+2370 Msa1336470:intergenic
ATCTGGCTGATTATGTACCT+TGG 0.504083 tig0001216:-1594 Msa1336470:CDS
CTCGAGTTATAGTAAATGCA+TGG 0.511269 tig0001216:-125 Msa1336470:CDS
GACAAGAAAATGAATTATCT+CGG 0.516759 tig0001216:-36 Msa1336470:CDS
GGATCAGAGATCTTGTCATA+TGG 0.519540 tig0001216:-1922 Msa1336470:CDS
TTGAAGAAAGTTGCTTTGGA+AGG 0.521524 tig0001216:-1757 Msa1336470:CDS
ATCTTGTCATATGGTTCCAA+AGG 0.522228 tig0001216:-1913 Msa1336470:CDS
GATGAGATACAAAATGAAGT+AGG 0.525470 tig0001216:-306 Msa1336470:CDS
GCTGATTATGTACCTTGGCT+AGG 0.527975 tig0001216:-1589 Msa1336470:CDS
GTTTAATTACTTAGATATGG+TGG 0.529100 tig0001216:-247 Msa1336470:CDS
CATCTGCTACCACGATTGAG+TGG 0.529113 tig0001216:-377 Msa1336470:CDS
TAGTCCTCACTCCTCAGTCT+TGG 0.529241 tig0001216:-2305 Msa1336470:five_prime_UTR
CCAATCATGTCATTACAACT+TGG 0.531338 tig0001216:-2039 Msa1336470:CDS
AGTATGTGAAAGTGAAGAGA+AGG 0.531627 tig0001216:+2211 Msa1336470:intergenic
GTAGTGTGTTTGTTTGTGGA+TGG 0.532022 tig0001216:+2354 Msa1336470:intergenic
GTCATATGGTTCCAAAGGGA+TGG 0.532776 tig0001216:-1908 Msa1336470:CDS
GGTTGTAGAGAATCTTATTG+AGG 0.545934 tig0001216:-1713 Msa1336470:CDS
TGAAGTAGGAAATAAGAGAA+TGG 0.548137 tig0001216:-292 Msa1336470:CDS
TTTGTGGATGGTATGAGTGG+TGG 0.555756 tig0001216:+2366 Msa1336470:intergenic
GATGTTTGGTCCTATTAGGA+AGG 0.561654 tig0001216:-1806 Msa1336470:CDS
GAAAGTTGCTTTGGAAGGTG+AGG 0.574396 tig0001216:-1752 Msa1336470:CDS
TAATTACTTAGATATGGTGG+TGG 0.575823 tig0001216:-244 Msa1336470:CDS
TCTTGTCATATGGTTCCAAA+GGG 0.582909 tig0001216:-1912 Msa1336470:CDS
CATTGATCGAACTAACATCA+AGG 0.583673 tig0001216:-436 Msa1336470:CDS
TATAAGATGATACTGGGTAG+AGG 0.586882 tig0001216:-1682 Msa1336470:CDS
TTGTTTGTGGATGGTATGAG+TGG 0.591458 tig0001216:+2363 Msa1336470:intergenic
CACCAAACCATTGATGTCGA+GGG 0.592553 tig0001216:-474 Msa1336470:CDS
GCACCAAACCATTGATGTCG+AGG 0.596252 tig0001216:-475 Msa1336470:CDS
GTCCTTATTGGCGTAATGTG+AGG 0.600588 tig0001216:-1870 Msa1336470:CDS
AGTGATTGAAGTGTTCTATG+TGG 0.604927 tig0001216:+2078 Msa1336470:intergenic
GCAAGTCGAGCAAAGAGTCA+AGG 0.606393 tig0001216:-1943 Msa1336470:CDS
TCGAGTTATAGTAAATGCAT+GGG 0.620121 tig0001216:-124 Msa1336470:CDS
ATCTGCTACCACGATTGAGT+GGG 0.629522 tig0001216:-376 Msa1336470:CDS
ATTGGTAGTGTTGATGGACC+TGG 0.631458 tig0001216:+2132 Msa1336470:intergenic
TGAGGTTGTGAATGTGAGTG+AGG 0.639648 tig0001216:-1734 Msa1336470:CDS
ATTGTGTATAAGATGATACT+GGG 0.639961 tig0001216:-1688 Msa1336470:CDS
TAGATCAAGCACCAAGACTG+AGG 0.668096 tig0001216:+2294 Msa1336470:intergenic
AGCACCAAGACTGAGGAGTG+AGG 0.670511 tig0001216:+2301 Msa1336470:intergenic
AACCAGTAAAGCCCTCGATG+AGG 0.695366 tig0001216:-589 Msa1336470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTTTATTGATATTTAAT+TGG - tig0001216:1039-1058 Msa1336470:intron 10.0%
!! ATAGTTTATTGATATTTAAT+TGG - tig0001216:1039-1058 Msa1336470:intron 10.0%
!!! TCAATTTACATATGATTTTA+TGG - tig0001216:1719-1738 Msa1336470:CDS 15.0%
!!! TATAAGTTTAACTTTTTGTT+AGG - tig0001216:1787-1806 Msa1336470:CDS 15.0%
!!! ATAAGTTTAACTTTTTGTTA+GGG - tig0001216:1788-1807 Msa1336470:CDS 15.0%
!!! TCAATTTACATATGATTTTA+TGG - tig0001216:1719-1738 Msa1336470:CDS 15.0%
!!! TATAAGTTTAACTTTTTGTT+AGG - tig0001216:1787-1806 Msa1336470:CDS 15.0%
!!! ATAAGTTTAACTTTTTGTTA+GGG - tig0001216:1788-1807 Msa1336470:CDS 15.0%
!! GTTTATTGATATTTAATTGG+TGG - tig0001216:1042-1061 Msa1336470:intron 20.0%
!! ATTTCATAACTAAAAGTGAA+GGG + tig0001216:1336-1355 Msa1336470:intergenic 20.0%
!! AATTTCATAACTAAAAGTGA+AGG + tig0001216:1337-1356 Msa1336470:intergenic 20.0%
!!! TTCACTTTTAGTTATGAAAT+TGG - tig0001216:1336-1355 Msa1336470:intron 20.0%
!!! TTTTAGTTATGAAATTGGAA+AGG - tig0001216:1341-1360 Msa1336470:intron 20.0%
!! ATGATCAATTTATTGTACAT+GGG - tig0001216:1431-1450 Msa1336470:intron 20.0%
!! GAAGTTTAATTACTTAGATA+TGG - tig0001216:2171-2190 Msa1336470:CDS 20.0%
!! GTTTATTGATATTTAATTGG+TGG - tig0001216:1042-1061 Msa1336470:intron 20.0%
!! ATTTCATAACTAAAAGTGAA+GGG + tig0001216:1336-1355 Msa1336470:intergenic 20.0%
!! AATTTCATAACTAAAAGTGA+AGG + tig0001216:1337-1356 Msa1336470:intergenic 20.0%
!!! TTCACTTTTAGTTATGAAAT+TGG - tig0001216:1336-1355 Msa1336470:intron 20.0%
!!! TTTTAGTTATGAAATTGGAA+AGG - tig0001216:1341-1360 Msa1336470:intron 20.0%
!! ATGATCAATTTATTGTACAT+GGG - tig0001216:1431-1450 Msa1336470:intron 20.0%
!! GAAGTTTAATTACTTAGATA+TGG - tig0001216:2171-2190 Msa1336470:CDS 20.0%
!! CATGTCTATAATTGAAGTTT+TGG + tig0001216:155-174 Msa1336470:intergenic 25.0%
!!! TGGATAATGGTATTTTGTTT+TGG + tig0001216:259-278 Msa1336470:intergenic 25.0%
! GAAGATGAAATGATAATAGT+TGG + tig0001216:415-434 Msa1336470:intergenic 25.0%
! TATTGTGTATAAGATGATAC+TGG - tig0001216:732-751 Msa1336470:intron 25.0%
! ATTGTGTATAAGATGATACT+GGG - tig0001216:733-752 Msa1336470:intron 25.0%
! TATGAGATTATCTGATGATA+TGG - tig0001216:913-932 Msa1336470:intron 25.0%
! TGAATATTGTGTATTGTGTT+TGG - tig0001216:1158-1177 Msa1336470:intron 25.0%
!! ATTGATGGTTTATGAAGAAA+AGG - tig0001216:1181-1200 Msa1336470:intron 25.0%
!! TTGATGGTTTATGAAGAAAA+GGG - tig0001216:1182-1201 Msa1336470:intron 25.0%
!! AACATGTGATTTTTCCTATA+TGG - tig0001216:1277-1296 Msa1336470:intron 25.0%
!! ACATGTGATTTTTCCTATAT+GGG - tig0001216:1278-1297 Msa1336470:intron 25.0%
!! TTTTCCTATATGGGAATAAA+AGG - tig0001216:1287-1306 Msa1336470:intron 25.0%
! TTTCCTATATGGGAATAAAA+GGG - tig0001216:1288-1307 Msa1336470:intron 25.0%
! TCACAATCTCAAAATATTTG+AGG - tig0001216:1375-1394 Msa1336470:intron 25.0%
! GATGATCAATTTATTGTACA+TGG - tig0001216:1430-1449 Msa1336470:intron 25.0%
! TGATCAATTTATTGTACATG+GGG - tig0001216:1432-1451 Msa1336470:intron 25.0%
! GTTTAATTACTTAGATATGG+TGG - tig0001216:2174-2193 Msa1336470:CDS 25.0%
! GACAAGAAAATGAATTATCT+CGG - tig0001216:2385-2404 Msa1336470:five_prime_UTR 25.0%
!! CATGTCTATAATTGAAGTTT+TGG + tig0001216:155-174 Msa1336470:intergenic 25.0%
!!! TGGATAATGGTATTTTGTTT+TGG + tig0001216:259-278 Msa1336470:intergenic 25.0%
! GAAGATGAAATGATAATAGT+TGG + tig0001216:415-434 Msa1336470:intergenic 25.0%
! TATTGTGTATAAGATGATAC+TGG - tig0001216:732-751 Msa1336470:intron 25.0%
! ATTGTGTATAAGATGATACT+GGG - tig0001216:733-752 Msa1336470:intron 25.0%
! TATGAGATTATCTGATGATA+TGG - tig0001216:913-932 Msa1336470:intron 25.0%
! TGAATATTGTGTATTGTGTT+TGG - tig0001216:1158-1177 Msa1336470:intron 25.0%
!! ATTGATGGTTTATGAAGAAA+AGG - tig0001216:1181-1200 Msa1336470:intron 25.0%
!! TTGATGGTTTATGAAGAAAA+GGG - tig0001216:1182-1201 Msa1336470:intron 25.0%
!! AACATGTGATTTTTCCTATA+TGG - tig0001216:1277-1296 Msa1336470:intron 25.0%
!! ACATGTGATTTTTCCTATAT+GGG - tig0001216:1278-1297 Msa1336470:intron 25.0%
!! TTTTCCTATATGGGAATAAA+AGG - tig0001216:1287-1306 Msa1336470:intron 25.0%
! TTTCCTATATGGGAATAAAA+GGG - tig0001216:1288-1307 Msa1336470:intron 25.0%
! TCACAATCTCAAAATATTTG+AGG - tig0001216:1375-1394 Msa1336470:intron 25.0%
! GATGATCAATTTATTGTACA+TGG - tig0001216:1430-1449 Msa1336470:intron 25.0%
! TGATCAATTTATTGTACATG+GGG - tig0001216:1432-1451 Msa1336470:intron 25.0%
! GTTTAATTACTTAGATATGG+TGG - tig0001216:2174-2193 Msa1336470:CDS 25.0%
! GACAAGAAAATGAATTATCT+CGG - tig0001216:2385-2404 Msa1336470:five_prime_UTR 25.0%
! TGGTAGCTTTTTATGGATAA+TGG + tig0001216:272-291 Msa1336470:intergenic 30.0%
ATTATCCATAAAAAGCTACC+AGG - tig0001216:271-290 Msa1336470:CDS 30.0%
ATGTGAAGATTTCCGATTAT+TGG + tig0001216:310-329 Msa1336470:intergenic 30.0%
CAATCACTCTCCAAAAAATA+TGG - tig0001216:358-377 Msa1336470:CDS 30.0%
!!! CATGATTGGACCATATTTTT+TGG + tig0001216:371-390 Msa1336470:intergenic 30.0%
! ATCTTTGAAGAAAGTTGCTT+TGG - tig0001216:660-679 Msa1336470:intron 30.0%
!! TAAGTTAGTTCTAGAAGCAT+TGG - tig0001216:786-805 Msa1336470:intron 30.0%
! TAACCCTTTTATTCCCATAT+AGG + tig0001216:1294-1313 Msa1336470:intergenic 30.0%
TAGTTATGAAATTGGAAAGG+TGG - tig0001216:1344-1363 Msa1336470:intron 30.0%
!! TTTTAGTTAAACTGAGAACG+AGG - tig0001216:1526-1545 Msa1336470:intron 30.0%
ACAAAAACAGAAGAAGCTAT+TGG + tig0001216:1642-1661 Msa1336470:intergenic 30.0%
GAAAATATTCATGTAGTAGC+TGG - tig0001216:1758-1777 Msa1336470:CDS 30.0%
! TGAAGAATTTTCATCACTCT+TGG + tig0001216:2094-2113 Msa1336470:intergenic 30.0%
GATGAGATACAAAATGAAGT+AGG - tig0001216:2115-2134 Msa1336470:CDS 30.0%
TGAAGTAGGAAATAAGAGAA+TGG - tig0001216:2129-2148 Msa1336470:CDS 30.0%
TAAGAGAATGGTTAAAGAGA+AGG - tig0001216:2141-2160 Msa1336470:CDS 30.0%
TAATTACTTAGATATGGTGG+TGG - tig0001216:2177-2196 Msa1336470:CDS 30.0%
TCGAGTTATAGTAAATGCAT+GGG - tig0001216:2297-2316 Msa1336470:five_prime_UTR 30.0%
TCTTGTCAATAAATCTCTCT+GGG + tig0001216:2372-2391 Msa1336470:intergenic 30.0%
TTCTTGTCAATAAATCTCTC+TGG + tig0001216:2373-2392 Msa1336470:intergenic 30.0%
! TGGTAGCTTTTTATGGATAA+TGG + tig0001216:272-291 Msa1336470:intergenic 30.0%
ATTATCCATAAAAAGCTACC+AGG - tig0001216:271-290 Msa1336470:CDS 30.0%
ATGTGAAGATTTCCGATTAT+TGG + tig0001216:310-329 Msa1336470:intergenic 30.0%
CAATCACTCTCCAAAAAATA+TGG - tig0001216:358-377 Msa1336470:CDS 30.0%
!!! CATGATTGGACCATATTTTT+TGG + tig0001216:371-390 Msa1336470:intergenic 30.0%
! ATCTTTGAAGAAAGTTGCTT+TGG - tig0001216:660-679 Msa1336470:intron 30.0%
!! TAAGTTAGTTCTAGAAGCAT+TGG - tig0001216:786-805 Msa1336470:intron 30.0%
! TAACCCTTTTATTCCCATAT+AGG + tig0001216:1294-1313 Msa1336470:intergenic 30.0%
TAGTTATGAAATTGGAAAGG+TGG - tig0001216:1344-1363 Msa1336470:intron 30.0%
!! TTTTAGTTAAACTGAGAACG+AGG - tig0001216:1526-1545 Msa1336470:intron 30.0%
ACAAAAACAGAAGAAGCTAT+TGG + tig0001216:1642-1661 Msa1336470:intergenic 30.0%
GAAAATATTCATGTAGTAGC+TGG - tig0001216:1758-1777 Msa1336470:CDS 30.0%
! TGAAGAATTTTCATCACTCT+TGG + tig0001216:2094-2113 Msa1336470:intergenic 30.0%
GATGAGATACAAAATGAAGT+AGG - tig0001216:2115-2134 Msa1336470:CDS 30.0%
TGAAGTAGGAAATAAGAGAA+TGG - tig0001216:2129-2148 Msa1336470:CDS 30.0%
TAAGAGAATGGTTAAAGAGA+AGG - tig0001216:2141-2160 Msa1336470:CDS 30.0%
TAATTACTTAGATATGGTGG+TGG - tig0001216:2177-2196 Msa1336470:CDS 30.0%
TCGAGTTATAGTAAATGCAT+GGG - tig0001216:2297-2316 Msa1336470:five_prime_UTR 30.0%
TCTTGTCAATAAATCTCTCT+GGG + tig0001216:2372-2391 Msa1336470:intergenic 30.0%
TTCTTGTCAATAAATCTCTC+TGG + tig0001216:2373-2392 Msa1336470:intergenic 30.0%
!!! TGGTTGGTGGGATATTTTTT+CGG + tig0001216:38-57 Msa1352840:intergenic 35.0%
ACTAGTAGTGTGTTTGTTTG+TGG + tig0001216:74-93 Msa1352840:intergenic 35.0%
AGTATGTGAAAGTGAAGAGA+AGG + tig0001216:213-232 Msa1336470:intergenic 35.0%
CCATCAACACTACCAATAAT+CGG - tig0001216:295-314 Msa1336470:CDS 35.0%
ATCGGAAATCTTCACATGTT+AGG - tig0001216:313-332 Msa1336470:CDS 35.0%
! AGTGATTGAAGTGTTCTATG+TGG + tig0001216:346-365 Msa1336470:intergenic 35.0%
CCAAGTTGTAATGACATGAT+TGG + tig0001216:385-404 Msa1336470:intergenic 35.0%
CCAATCATGTCATTACAACT+TGG - tig0001216:382-401 Msa1336470:CDS 35.0%
! AAACGATGTCATGAGTTTTG+AGG + tig0001216:456-475 Msa1336470:intergenic 35.0%
ATCTTGTCATATGGTTCCAA+AGG - tig0001216:508-527 Msa1336470:CDS 35.0%
TCTTGTCATATGGTTCCAAA+GGG - tig0001216:509-528 Msa1336470:CDS 35.0%
TTTCTGAGTATGGTCCTTAT+TGG - tig0001216:539-558 Msa1336470:CDS 35.0%
GCTTCAAAAGTTGAGATGTT+TGG - tig0001216:601-620 Msa1336470:CDS 35.0%
TTGAGATGTTTGGTCCTATT+AGG - tig0001216:611-630 Msa1336470:CDS 35.0%
! TTGAAGAAAGTTGCTTTGGA+AGG - tig0001216:664-683 Msa1336470:intron 35.0%
GGTTGTAGAGAATCTTATTG+AGG - tig0001216:708-727 Msa1336470:intron 35.0%
TATAAGATGATACTGGGTAG+AGG - tig0001216:739-758 Msa1336470:intron 35.0%
! TTTGATGGGAGCTTTTAATC+TGG - tig0001216:810-829 Msa1336470:intron 35.0%
GTGTATTGTGTTTGGATTGA+TGG - tig0001216:1166-1185 Msa1336470:intron 35.0%
ATGGTTTATGAAGAAAAGGG+CGG - tig0001216:1185-1204 Msa1336470:intron 35.0%
AGGGCAATTGAGATAAAATC+AGG + tig0001216:1317-1336 Msa1336470:intergenic 35.0%
ACTGTCCGTCATAATACAAT+CGG + tig0001216:1596-1615 Msa1336470:intergenic 35.0%
CATTGATCGAACTAACATCA+AGG - tig0001216:1985-2004 Msa1336470:CDS 35.0%
! TATTTTGCTCGACATGATAG+TGG - tig0001216:2009-2028 Msa1336470:CDS 35.0%
ACCTTAAGACTTTATCCTGT+TGG - tig0001216:2205-2224 Msa1336470:CDS 35.0%
TCCAACAGGATAAAGTCTTA+AGG + tig0001216:2209-2228 Msa1336470:intergenic 35.0%
CATTCACGAGGGATTAATAA+GGG + tig0001216:2232-2251 Msa1336470:intergenic 35.0%
ACATTCACGAGGGATTAATA+AGG + tig0001216:2233-2252 Msa1336470:intergenic 35.0%
! AGAGAGAGCATAACAATTGA+TGG - tig0001216:2253-2272 Msa1336470:exon 35.0%
CTCGAGTTATAGTAAATGCA+TGG - tig0001216:2296-2315 Msa1336470:five_prime_UTR 35.0%
! ATAGTAAATGCATGGGCTAT+AGG - tig0001216:2304-2323 Msa1336470:five_prime_UTR 35.0%
! TAGTAAATGCATGGGCTATA+GGG - tig0001216:2305-2324 Msa1336470:five_prime_UTR 35.0%
TAGGGAGAGATTCTAATGTT+TGG - tig0001216:2323-2342 Msa1336470:five_prime_UTR 35.0%
!!! TGGTTGGTGGGATATTTTTT+CGG + tig0001216:38-57 Msa1336470:intergenic 35.0%
ACTAGTAGTGTGTTTGTTTG+TGG + tig0001216:74-93 Msa1336470:intergenic 35.0%
AGTATGTGAAAGTGAAGAGA+AGG + tig0001216:213-232 Msa1336470:intergenic 35.0%
CCATCAACACTACCAATAAT+CGG - tig0001216:295-314 Msa1336470:CDS 35.0%
ATCGGAAATCTTCACATGTT+AGG - tig0001216:313-332 Msa1336470:CDS 35.0%
! AGTGATTGAAGTGTTCTATG+TGG + tig0001216:346-365 Msa1336470:intergenic 35.0%
CCAAGTTGTAATGACATGAT+TGG + tig0001216:385-404 Msa1336470:intergenic 35.0%
CCAATCATGTCATTACAACT+TGG - tig0001216:382-401 Msa1336470:CDS 35.0%
! AAACGATGTCATGAGTTTTG+AGG + tig0001216:456-475 Msa1336470:intergenic 35.0%
ATCTTGTCATATGGTTCCAA+AGG - tig0001216:508-527 Msa1336470:CDS 35.0%
TCTTGTCATATGGTTCCAAA+GGG - tig0001216:509-528 Msa1336470:CDS 35.0%
TTTCTGAGTATGGTCCTTAT+TGG - tig0001216:539-558 Msa1336470:CDS 35.0%
GCTTCAAAAGTTGAGATGTT+TGG - tig0001216:601-620 Msa1336470:CDS 35.0%
TTGAGATGTTTGGTCCTATT+AGG - tig0001216:611-630 Msa1336470:CDS 35.0%
! TTGAAGAAAGTTGCTTTGGA+AGG - tig0001216:664-683 Msa1336470:intron 35.0%
GGTTGTAGAGAATCTTATTG+AGG - tig0001216:708-727 Msa1336470:intron 35.0%
TATAAGATGATACTGGGTAG+AGG - tig0001216:739-758 Msa1336470:intron 35.0%
! TTTGATGGGAGCTTTTAATC+TGG - tig0001216:810-829 Msa1336470:intron 35.0%
GTGTATTGTGTTTGGATTGA+TGG - tig0001216:1166-1185 Msa1336470:intron 35.0%
ATGGTTTATGAAGAAAAGGG+CGG - tig0001216:1185-1204 Msa1336470:intron 35.0%
AGGGCAATTGAGATAAAATC+AGG + tig0001216:1317-1336 Msa1336470:intergenic 35.0%
ACTGTCCGTCATAATACAAT+CGG + tig0001216:1596-1615 Msa1336470:intergenic 35.0%
CATTGATCGAACTAACATCA+AGG - tig0001216:1985-2004 Msa1336470:CDS 35.0%
! TATTTTGCTCGACATGATAG+TGG - tig0001216:2009-2028 Msa1336470:CDS 35.0%
ACCTTAAGACTTTATCCTGT+TGG - tig0001216:2205-2224 Msa1336470:CDS 35.0%
TCCAACAGGATAAAGTCTTA+AGG + tig0001216:2209-2228 Msa1336470:intergenic 35.0%
CATTCACGAGGGATTAATAA+GGG + tig0001216:2232-2251 Msa1336470:intergenic 35.0%
ACATTCACGAGGGATTAATA+AGG + tig0001216:2233-2252 Msa1336470:intergenic 35.0%
! AGAGAGAGCATAACAATTGA+TGG - tig0001216:2253-2272 Msa1336470:exon 35.0%
CTCGAGTTATAGTAAATGCA+TGG - tig0001216:2296-2315 Msa1336470:five_prime_UTR 35.0%
! ATAGTAAATGCATGGGCTAT+AGG - tig0001216:2304-2323 Msa1336470:five_prime_UTR 35.0%
! TAGTAAATGCATGGGCTATA+GGG - tig0001216:2305-2324 Msa1336470:five_prime_UTR 35.0%
TAGGGAGAGATTCTAATGTT+TGG - tig0001216:2323-2342 Msa1336470:five_prime_UTR 35.0%
!!! GGTTGGTGGGATATTTTTTC+GGG + tig0001216:37-56 Msa1352840:intergenic 40.0%
TTGTTTGTGGATGGTATGAG+TGG + tig0001216:61-80 Msa1352840:intergenic 40.0%
GTAGTGTGTTTGTTTGTGGA+TGG + tig0001216:70-89 Msa1352840:intergenic 40.0%
! ATGGACCTGGTAGCTTTTTA+TGG + tig0001216:279-298 Msa1336470:intergenic 40.0%
!! CCGATTATTGGTAGTGTTGA+TGG + tig0001216:298-317 Msa1336470:intergenic 40.0%
GGATCAGAGATCTTGTCATA+TGG - tig0001216:499-518 Msa1336470:CDS 40.0%
TTCCTCACATTACGCCAATA+AGG + tig0001216:556-575 Msa1336470:intergenic 40.0%
GATGTTTGGTCCTATTAGGA+AGG - tig0001216:615-634 Msa1336470:CDS 40.0%
TCCTATTAGGAAGGAGAAGT+TGG - tig0001216:624-643 Msa1336470:intron 40.0%
TCCAACTTCTCCTTCCTAAT+AGG + tig0001216:628-647 Msa1336470:intergenic 40.0%
! GAAGGAGAAGTTGGATGTTT+TGG - tig0001216:633-652 Msa1336470:intron 40.0%
!! TCTAGAAGCATTGGCTTTGA+TGG - tig0001216:795-814 Msa1336470:intron 40.0%
!! CTAGAAGCATTGGCTTTGAT+GGG - tig0001216:796-815 Msa1336470:intron 40.0%
ATCTGGCTGATTATGTACCT+TGG - tig0001216:827-846 Msa1336470:intron 40.0%
AATTGTCAAGACGTACCTGA+AGG + tig0001216:867-886 Msa1336470:intergenic 40.0%
TGGTTTATGAAGAAAAGGGC+GGG - tig0001216:1186-1205 Msa1336470:intron 40.0%
! TTCCATTCCCTAGCTATTTC+AGG - tig0001216:1480-1499 Msa1336470:intron 40.0%
TTCCTGAAATAGCTAGGGAA+TGG + tig0001216:1485-1504 Msa1336470:intergenic 40.0%
! ATTCCCTAGCTATTTCAGGA+AGG - tig0001216:1484-1503 Msa1336470:intron 40.0%
! TTCCCTAGCTATTTCAGGAA+GGG - tig0001216:1485-1504 Msa1336470:intron 40.0%
TACCCTTCCTGAAATAGCTA+GGG + tig0001216:1490-1509 Msa1336470:intergenic 40.0%
TTACCCTTCCTGAAATAGCT+AGG + tig0001216:1491-1510 Msa1336470:intergenic 40.0%
!! GAGGTCTTCAAATGGATTGT+TGG - tig0001216:1545-1564 Msa1336470:intron 40.0%
GAGCTCCGATTGTATTATGA+CGG - tig0001216:1588-1607 Msa1336470:CDS 40.0%
TGTCGAGGGTGAACAAAATA+TGG - tig0001216:1961-1980 Msa1336470:CDS 40.0%
! GGGCTTTATCTGAACTTCTA+AGG - tig0001216:2065-2084 Msa1336470:CDS 40.0%
!!! GGTTGGTGGGATATTTTTTC+GGG + tig0001216:37-56 Msa1336470:intergenic 40.0%
TTGTTTGTGGATGGTATGAG+TGG + tig0001216:61-80 Msa1336470:intergenic 40.0%
GTAGTGTGTTTGTTTGTGGA+TGG + tig0001216:70-89 Msa1336470:intergenic 40.0%
! ATGGACCTGGTAGCTTTTTA+TGG + tig0001216:279-298 Msa1336470:intergenic 40.0%
!! CCGATTATTGGTAGTGTTGA+TGG + tig0001216:298-317 Msa1336470:intergenic 40.0%
GGATCAGAGATCTTGTCATA+TGG - tig0001216:499-518 Msa1336470:CDS 40.0%
TTCCTCACATTACGCCAATA+AGG + tig0001216:556-575 Msa1336470:intergenic 40.0%
GATGTTTGGTCCTATTAGGA+AGG - tig0001216:615-634 Msa1336470:CDS 40.0%
TCCTATTAGGAAGGAGAAGT+TGG - tig0001216:624-643 Msa1336470:intron 40.0%
TCCAACTTCTCCTTCCTAAT+AGG + tig0001216:628-647 Msa1336470:intergenic 40.0%
! GAAGGAGAAGTTGGATGTTT+TGG - tig0001216:633-652 Msa1336470:intron 40.0%
!! TCTAGAAGCATTGGCTTTGA+TGG - tig0001216:795-814 Msa1336470:intron 40.0%
!! CTAGAAGCATTGGCTTTGAT+GGG - tig0001216:796-815 Msa1336470:intron 40.0%
ATCTGGCTGATTATGTACCT+TGG - tig0001216:827-846 Msa1336470:intron 40.0%
AATTGTCAAGACGTACCTGA+AGG + tig0001216:867-886 Msa1336470:intergenic 40.0%
TGGTTTATGAAGAAAAGGGC+GGG - tig0001216:1186-1205 Msa1336470:intron 40.0%
! TTCCATTCCCTAGCTATTTC+AGG - tig0001216:1480-1499 Msa1336470:intron 40.0%
TTCCTGAAATAGCTAGGGAA+TGG + tig0001216:1485-1504 Msa1336470:intergenic 40.0%
! ATTCCCTAGCTATTTCAGGA+AGG - tig0001216:1484-1503 Msa1336470:intron 40.0%
! TTCCCTAGCTATTTCAGGAA+GGG - tig0001216:1485-1504 Msa1336470:intron 40.0%
TACCCTTCCTGAAATAGCTA+GGG + tig0001216:1490-1509 Msa1336470:intergenic 40.0%
TTACCCTTCCTGAAATAGCT+AGG + tig0001216:1491-1510 Msa1336470:intergenic 40.0%
!! GAGGTCTTCAAATGGATTGT+TGG - tig0001216:1545-1564 Msa1336470:intron 40.0%
GAGCTCCGATTGTATTATGA+CGG - tig0001216:1588-1607 Msa1336470:CDS 40.0%
TGTCGAGGGTGAACAAAATA+TGG - tig0001216:1961-1980 Msa1336470:CDS 40.0%
! GGGCTTTATCTGAACTTCTA+AGG - tig0001216:2065-2084 Msa1336470:CDS 40.0%
TTTGTGGATGGTATGAGTGG+TGG + tig0001216:58-77 Msa1352840:intergenic 45.0%
TAGATCAAGCACCAAGACTG+AGG + tig0001216:130-149 Msa1336470:intergenic 45.0%
!! ATTGGTAGTGTTGATGGACC+TGG + tig0001216:292-311 Msa1336470:intergenic 45.0%
GTCATATGGTTCCAAAGGGA+TGG - tig0001216:513-532 Msa1336470:CDS 45.0%
CTCAGAAAAAGCCATCCCTT+TGG + tig0001216:527-546 Msa1336470:intergenic 45.0%
!! GGGATGGCTTTTTCTGAGTA+TGG - tig0001216:529-548 Msa1336470:CDS 45.0%
GTCCTTATTGGCGTAATGTG+AGG - tig0001216:551-570 Msa1336470:CDS 45.0%
!! GAAAGTTGCTTTGGAAGGTG+AGG - tig0001216:669-688 Msa1336470:intron 45.0%
TGAGGTTGTGAATGTGAGTG+AGG - tig0001216:687-706 Msa1336470:intron 45.0%
GCTGATTATGTACCTTGGCT+AGG - tig0001216:832-851 Msa1336470:intron 45.0%
GGTTTATGAAGAAAAGGGCG+GGG - tig0001216:1187-1206 Msa1336470:intron 45.0%
CTGAGAACGAGGTCTTCAAA+TGG - tig0001216:1537-1556 Msa1336470:intron 45.0%
TAATACAATCGGAGCTCAGC+TGG + tig0001216:1585-1604 Msa1336470:intergenic 45.0%
! TAAAGCCCTCGATGAGGTTT+TGG - tig0001216:1838-1857 Msa1336470:CDS 45.0%
CATCTCCAAAACCTCATCGA+GGG + tig0001216:1846-1865 Msa1336470:intergenic 45.0%
TCATCTCCAAAACCTCATCG+AGG + tig0001216:1847-1866 Msa1336470:intergenic 45.0%
CACCAAACCATTGATGTCGA+GGG - tig0001216:1947-1966 Msa1336470:CDS 45.0%
TTGTTCACCCTCGACATCAA+TGG + tig0001216:1957-1976 Msa1336470:intergenic 45.0%
ATCTGCTACCACGATTGAGT+GGG - tig0001216:2045-2064 Msa1336470:CDS 45.0%
AGATAAAGCCCACTCAATCG+TGG + tig0001216:2056-2075 Msa1336470:intergenic 45.0%
GGGATTAATAAGGGTCCAAC+AGG + tig0001216:2223-2242 Msa1336470:intergenic 45.0%
TGCTCTCTCTACATTCACGA+GGG + tig0001216:2243-2262 Msa1336470:intergenic 45.0%
ATGCTCTCTCTACATTCACG+AGG + tig0001216:2244-2263 Msa1336470:intergenic 45.0%
TTTGTGGATGGTATGAGTGG+TGG + tig0001216:58-77 Msa1336470:intergenic 45.0%
TAGATCAAGCACCAAGACTG+AGG + tig0001216:130-149 Msa1336470:intergenic 45.0%
!! ATTGGTAGTGTTGATGGACC+TGG + tig0001216:292-311 Msa1336470:intergenic 45.0%
GTCATATGGTTCCAAAGGGA+TGG - tig0001216:513-532 Msa1336470:CDS 45.0%
CTCAGAAAAAGCCATCCCTT+TGG + tig0001216:527-546 Msa1336470:intergenic 45.0%
!! GGGATGGCTTTTTCTGAGTA+TGG - tig0001216:529-548 Msa1336470:CDS 45.0%
GTCCTTATTGGCGTAATGTG+AGG - tig0001216:551-570 Msa1336470:CDS 45.0%
!! GAAAGTTGCTTTGGAAGGTG+AGG - tig0001216:669-688 Msa1336470:intron 45.0%
TGAGGTTGTGAATGTGAGTG+AGG - tig0001216:687-706 Msa1336470:intron 45.0%
GCTGATTATGTACCTTGGCT+AGG - tig0001216:832-851 Msa1336470:intron 45.0%
GGTTTATGAAGAAAAGGGCG+GGG - tig0001216:1187-1206 Msa1336470:intron 45.0%
CTGAGAACGAGGTCTTCAAA+TGG - tig0001216:1537-1556 Msa1336470:intron 45.0%
TAATACAATCGGAGCTCAGC+TGG + tig0001216:1585-1604 Msa1336470:intergenic 45.0%
! TAAAGCCCTCGATGAGGTTT+TGG - tig0001216:1838-1857 Msa1336470:CDS 45.0%
CATCTCCAAAACCTCATCGA+GGG + tig0001216:1846-1865 Msa1336470:intergenic 45.0%
TCATCTCCAAAACCTCATCG+AGG + tig0001216:1847-1866 Msa1336470:intergenic 45.0%
CACCAAACCATTGATGTCGA+GGG - tig0001216:1947-1966 Msa1336470:CDS 45.0%
TTGTTCACCCTCGACATCAA+TGG + tig0001216:1957-1976 Msa1336470:intergenic 45.0%
ATCTGCTACCACGATTGAGT+GGG - tig0001216:2045-2064 Msa1336470:CDS 45.0%
AGATAAAGCCCACTCAATCG+TGG + tig0001216:2056-2075 Msa1336470:intergenic 45.0%
GGGATTAATAAGGGTCCAAC+AGG + tig0001216:2223-2242 Msa1336470:intergenic 45.0%
TGCTCTCTCTACATTCACGA+GGG + tig0001216:2243-2262 Msa1336470:intergenic 45.0%
ATGCTCTCTCTACATTCACG+AGG + tig0001216:2244-2263 Msa1336470:intergenic 45.0%
TGGTATGAGTGGTGGTTGGT+GGG + tig0001216:50-69 Msa1352840:intergenic 50.0%
ATGGTATGAGTGGTGGTTGG+TGG + tig0001216:51-70 Msa1352840:intergenic 50.0%
TGGATGGTATGAGTGGTGGT+TGG + tig0001216:54-73 Msa1352840:intergenic 50.0%
TAGTCCTCACTCCTCAGTCT+TGG - tig0001216:116-135 Msa1336470:CDS 50.0%
GCAAGTCGAGCAAAGAGTCA+AGG - tig0001216:478-497 Msa1336470:CDS 50.0%
AGGTCAAAAACGCCTAGCCA+AGG + tig0001216:847-866 Msa1336470:intergenic 50.0%
! GCTAGGCGTTTTTGACCTTC+AGG - tig0001216:849-868 Msa1336470:intron 50.0%
AGAAGAAGCTATTGGACGCG+AGG + tig0001216:1634-1653 Msa1336470:intergenic 50.0%
AACCAGTAAAGCCCTCGATG+AGG - tig0001216:1832-1851 Msa1336470:CDS 50.0%
AACCTCATCGAGGGCTTTAC+TGG + tig0001216:1837-1856 Msa1336470:intergenic 50.0%
GCACCAAACCATTGATGTCG+AGG - tig0001216:1946-1965 Msa1336470:CDS 50.0%
CACCCTCGACATCAATGGTT+TGG + tig0001216:1952-1971 Msa1336470:intergenic 50.0%
CATCTGCTACCACGATTGAG+TGG - tig0001216:2044-2063 Msa1336470:CDS 50.0%
TGGTATGAGTGGTGGTTGGT+GGG + tig0001216:50-69 Msa1336470:intergenic 50.0%
ATGGTATGAGTGGTGGTTGG+TGG + tig0001216:51-70 Msa1336470:intergenic 50.0%
TGGATGGTATGAGTGGTGGT+TGG + tig0001216:54-73 Msa1336470:intergenic 50.0%
TAGTCCTCACTCCTCAGTCT+TGG - tig0001216:116-135 Msa1336470:CDS 50.0%
GCAAGTCGAGCAAAGAGTCA+AGG - tig0001216:478-497 Msa1336470:CDS 50.0%
AGGTCAAAAACGCCTAGCCA+AGG + tig0001216:847-866 Msa1336470:intergenic 50.0%
! GCTAGGCGTTTTTGACCTTC+AGG - tig0001216:849-868 Msa1336470:intron 50.0%
AGAAGAAGCTATTGGACGCG+AGG + tig0001216:1634-1653 Msa1336470:intergenic 50.0%
AACCAGTAAAGCCCTCGATG+AGG - tig0001216:1832-1851 Msa1336470:CDS 50.0%
AACCTCATCGAGGGCTTTAC+TGG + tig0001216:1837-1856 Msa1336470:intergenic 50.0%
GCACCAAACCATTGATGTCG+AGG - tig0001216:1946-1965 Msa1336470:CDS 50.0%
CACCCTCGACATCAATGGTT+TGG + tig0001216:1952-1971 Msa1336470:intergenic 50.0%
CATCTGCTACCACGATTGAG+TGG - tig0001216:2044-2063 Msa1336470:CDS 50.0%
AGCACCAAGACTGAGGAGTG+AGG + tig0001216:123-142 Msa1336470:intergenic 55.0%
TACAATCGGAGCTCAGCTGG+AGG + tig0001216:1582-1601 Msa1336470:intergenic 55.0%
AGCACCAAGACTGAGGAGTG+AGG + tig0001216:123-142 Msa1336470:intergenic 55.0%
TACAATCGGAGCTCAGCTGG+AGG + tig0001216:1582-1601 Msa1336470:intergenic 55.0%
Chromosome Type Strat End Strand Name
tig0001216 gene 11 2432 11 ID=Msa1336470;Name=Msa1336470
tig0001216 mRNA 11 2432 11 ID=Msa1336470-mRNA-1;Parent=Msa1336470;Name=Msa1336470-mRNA-1;_AED=0.36;_eAED=0.36;_QI=161|1|0.5|1|1|1|2|0|441
tig0001216 exon 11 634 11 ID=Msa1336470-mRNA-1:exon:747;Parent=Msa1336470-mRNA-1
tig0001216 exon 1573 2432 1573 ID=Msa1336470-mRNA-1:exon:746;Parent=Msa1336470-mRNA-1
tig0001216 five_prime_UTR 2272 2432 2272 ID=Msa1336470-mRNA-1:five_prime_utr;Parent=Msa1336470-mRNA-1
tig0001216 CDS 1573 2271 1573 ID=Msa1336470-mRNA-1:cds;Parent=Msa1336470-mRNA-1
tig0001216 CDS 11 634 11 ID=Msa1336470-mRNA-1:cds;Parent=Msa1336470-mRNA-1
Gene Sequence

>Msa1336470

ATGTCTTCTGCAGAAATAATAACTACATTACTTTATTTCCTTCTCTTCACTTTCACATACTTTTTATTCAAACTCTTCTTACATCCAAAACAAAATACCATTATCCATAAAAAGCTACCAGGTCCATCAACACTACCAATAATCGGAAATCTTCACATGTTAGGTAAACTTCCACATAGAACACTTCAATCACTCTCCAAAAAATATGGTCCAATCATGTCATTACAACTTGGTCAAGTTCCAACTATTATCATTTCATCTTCAAAAGCTGCAGAATCATTCCTCAAAACTCATGACATCGTTTTTGCAAGTCGAGCAAAGAGTCAAGGATCAGAGATCTTGTCATATGGTTCCAAAGGGATGGCTTTTTCTGAGTATGGTCCTTATTGGCGTAATGTGAGGAAATTTTGCACTTTGAAACTTTTTAGTGCTTCAAAAGTTGAGATGTTTGGTCCTATTAGGAAGGAGAAGTTGGATGTTTTGGTTAAATCTTTGAAGAAAGTTGCTTTGGAAGGTGAGGTTGTGAATGTGAGTGAGGTTGTAGAGAATCTTATTGAGGATATTGTGTATAAGATGATACTGGGTAGAGGTAAGTATGAGCAATTTGACATGAATAAGTTAGTTCTAGAAGCATTGGCTTTGATGGGAGCTTTTAATCTGGCTGATTATGTACCTTGGCTAGGCGTTTTTGACCTTCAGGGATTAACACGAGCTTGCAAAAAAACCAGTAAAGCCCTCGATGAGGTTTTGGAGATGATAATAACAGAGCACGAACAGACTGCTAATAGAGACAAAACTCGTAATGAAGACTTTGTAGACATACTTCTTTCAATTATGCACCAAACCATTGATGTCGAGGGTGAACAAAATATGGTCATTGATCGAACTAACATCAAGGCTATTTTGCTCGACATGATAGTGGCATCAATTCATACATCTGCTACCACGATTGAGTGGGCTTTATCTGAACTTCTAAGGCATCCAAGAGTGATGAAAATTCTTCAAGATGAGATACAAAATGAAGTAGGAAATAAGAGAATGGTTAAAGAGAAGGATCTGAAGAAGTTTAATTACTTAGATATGGTGGTGGATGAAACCTTAAGACTTTATCCTGTTGGACCCTTATTAATCCCTCGTGAATGTAGAGAGAGCATAACAATTGATGGATATTTTATAACGAAAAAGACTCGAGTTATAGTAAATGCATGGGCTATAGGGAGAGATTCTAATGTTTGGTCAGAAAATGCTGATGAATTTTACCCAGAGAGATTTATTGACAAGAAAATGAATTATCTCGGTCAAGAGTTTGAATCTATACCATTT

Protein sequence

>Msa1336470

MSSAEIITTLLYFLLFTFTYFLFKLFLHPKQNTIIHKKLPGPSTLPIIGNLHMLGKLPHRTLQSLSKKYGPIMSLQLGQVPTIIISSSKAAESFLKTHDIVFASRAKSQGSEILSYGSKGMAFSEYGPYWRNVRKFCTLKLFSASKVEMFGPIRKEKLDVLVKSLKKVALEGEVVNVSEVVENLIEDIVYKMILGRGKYEQFDMNKLVLEALALMGAFNLADYVPWLGVFDLQGLTRACKKTSKALDEVLEMIITEHEQTANRDKTRNEDFVDILLSIMHQTIDVEGEQNMVIDRTNIKAILLDMIVASIHTSATTIEWALSELLRHPRVMKILQDEIQNEVGNKRMVKEKDLKKFNYLDMVVDETLRLYPVGPLLIPRECRESITIDGYFITKKTRVIVNAWAIGRDSNVWSENADEFYPERFIDKKMNYLGQEFESIPF