AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0404220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404220 MtrunA17_Chr3g0132571 92.925 523 17 1 1 523 1 503 0.0 1000
Msa0404220 MtrunA17_Chr8g0359961 31.749 463 312 3 50 511 26 485 7.90e-76 248
Msa0404220 MtrunA17_Chr1g0185601 31.337 501 328 8 28 518 2 496 1.32e-75 247
Msa0404220 MtrunA17_Chr2g0282091 28.041 485 341 4 40 519 7 488 2.04e-60 207
Msa0404220 MtrunA17_Chr4g0021331 29.120 443 290 9 75 506 45 474 3.13e-59 203
Msa0404220 MtrunA17_Chr8g0368151 29.695 394 272 3 77 468 43 433 1.09e-57 199
Msa0404220 MtrunA17_Chr1g0155351 29.353 402 275 5 6 405 8 402 3.07e-56 193
Msa0404220 MtrunA17_Chr2g0303221 28.474 439 294 9 39 466 8 437 3.30e-56 195
Msa0404220 MtrunA17_Chr2g0324251 29.691 421 283 5 74 486 49 464 3.43e-52 184
Msa0404220 MtrunA17_Chr1g0194521 28.846 416 281 7 56 466 89 494 9.84e-52 184
Msa0404220 MtrunA17_Chr8g0335951 25.676 296 192 4 244 518 160 448 3.21e-31 125
Msa0404220 MtrunA17_Chr8g0349421 27.426 237 168 1 282 518 4 236 5.36e-28 112
Msa0404220 MtrunA17_Chr7g0256181 23.758 463 324 10 54 508 156 597 5.16e-27 115
Msa0404220 MtrunA17_Chr1g0171501 24.318 440 309 11 76 508 158 580 7.83e-25 108
Msa0404220 MtrunA17_Chr2g0328121 20.682 469 362 6 57 519 41 505 1.80e-20 94.7
Msa0404220 MtrunA17_Chr8g0349431 34.259 108 70 1 76 182 12 119 1.79e-15 73.2
Msa0404220 MtrunA17_Chr8g0359551 24.176 273 202 3 160 431 214 482 3.91e-13 72.0
Msa0404220 MtrunA17_Chr1g0170071 23.891 293 198 6 65 355 578 847 1.94e-12 70.1
Msa0404220 MtrunA17_Chr6g0481621 21.930 342 250 9 95 430 231 561 5.51e-11 65.1
Msa0404220 MtrunA17_Chr1g0168811 21.186 354 236 7 112 426 203 552 5.76e-11 65.1
Msa0404220 MtrunA17_Chr8g0353181 22.393 326 241 5 164 487 171 486 7.02e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404220 AT5G27460.1 54.105 475 210 4 39 508 20 491 1.54e-178 511
Msa0404220 AT1G02150.1 34.375 384 246 3 76 458 86 464 1.07e-79 259
Msa0404220 AT4G02820.1 30.802 474 322 4 46 519 50 517 3.59e-77 252
Msa0404220 AT4G21705.1 28.862 492 339 4 29 518 4 486 8.72e-69 229
Msa0404220 AT1G02370.1 28.889 450 308 5 76 519 90 533 1.53e-65 222
Msa0404220 AT2G20710.1 30.465 430 294 4 34 462 15 440 4.29e-64 217
Msa0404220 AT1G60770.1 31.738 397 264 4 126 518 91 484 8.12e-61 208
Msa0404220 AT4G01990.1 27.640 445 314 4 76 518 59 497 1.11e-56 197
Msa0404220 AT5G09450.1 31.395 344 231 4 55 395 53 394 4.59e-56 193
Msa0404220 AT2G20710.2 30.946 349 236 4 115 462 1 345 4.17e-48 171
Msa0404220 AT1G28020.1 30.675 326 214 4 74 393 53 372 5.79e-43 160
Msa0404220 AT1G80270.1 23.341 437 314 10 76 506 147 568 3.30e-28 119
Msa0404220 AT1G80270.3 23.341 437 314 10 76 506 147 568 3.30e-28 119
Msa0404220 AT1G80270.2 23.341 437 314 10 76 506 147 568 3.30e-28 119
Msa0404220 AT1G80270.5 23.341 437 314 10 76 506 147 568 3.30e-28 119
Msa0404220 AT1G80270.4 23.341 437 314 10 76 506 147 568 3.30e-28 119
Msa0404220 AT1G15480.1 21.918 438 323 9 76 508 145 568 1.60e-24 107
Msa0404220 AT3G11380.1 27.653 311 186 8 92 398 78 353 1.67e-20 95.1
Msa0404220 AT3G11380.1 32.044 181 114 4 72 243 360 540 6.53e-15 77.8
Msa0404220 AT3G15590.1 22.685 432 323 6 76 506 160 581 3.47e-20 94.7
Msa0404220 AT3G15590.2 22.685 432 323 6 76 506 160 581 3.47e-20 94.7
Msa0404220 AT1G28000.1 26.457 223 157 4 75 293 51 270 1.27e-18 88.2
Msa0404220 AT1G07590.1 21.711 456 349 6 68 519 76 527 8.73e-18 86.7
Msa0404220 AT1G43010.1 28.638 213 142 3 74 285 53 256 2.17e-17 82.4
Msa0404220 AT2G31400.2 25.000 268 197 3 160 426 270 534 1.91e-14 77.0
Msa0404220 AT2G31400.1 25.000 268 197 3 160 426 270 534 2.34e-14 76.6
Msa0404220 AT2G32630.1 24.014 279 189 7 158 426 294 559 3.96e-12 69.3
Msa0404220 AT3G06920.2 20.968 310 229 7 159 464 183 480 8.70e-12 68.6
Msa0404220 AT3G06920.3 20.968 310 229 7 159 464 183 480 8.70e-12 68.6
Msa0404220 AT3G06920.1 20.968 310 229 7 159 464 169 466 1.05e-11 68.2

Find 190 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTAATCCATTAGAATTTA+TGG 0.026049 3_2:+34996910 Msa0404220:three_prime_UTR
GAGACTGTTTCCATTCTTAA+AGG 0.176026 3_2:+34996869 Msa0404220:CDS
ATTAGCCATAGCTGAATATT+TGG 0.185459 3_2:+34996676 Msa0404220:CDS
CATTGCCAGTGCTTCAAAAT+TGG 0.193795 3_2:+34994905 Msa0404220:CDS
AATCATTGACCAGCTGAAAA+TGG 0.194638 3_2:-34997466 None:intergenic
AGTTTCATCATTTCATTATA+AGG 0.208074 3_2:-34995915 None:intergenic
TCTTCCACCAACTGCCTTAC+TGG 0.224446 3_2:-34996309 None:intergenic
CACTCACGTTACTAGGGTTC+TGG 0.230426 3_2:-34999619 Msa0404230:CDS
AGAGGGCCAAGGCGCGATTT+TGG 0.235373 3_2:-34999361 Msa0404230:CDS
CCATTCTCTGAAGATTCTTC+TGG 0.238798 3_2:-34996396 None:intergenic
ATGTAAACAACACGTGTATT+AGG 0.239103 3_2:-34996969 None:intergenic
GAAGACAGAGTATAAATTAA+TGG 0.266357 3_2:+34997506 Msa0404220:three_prime_UTR
ATTAATGGCTATCAAGCTTT+TGG 0.270529 3_2:+34997521 Msa0404220:three_prime_UTR
CATGAACGTCTCAGCTTTAC+TGG 0.276241 3_2:-34995853 None:intergenic
TAAAATCTTCTTCAACATAT+TGG 0.276929 3_2:+34999540 Msa0404220:three_prime_UTR
TTTGGTATATTTGTAGAATC+TGG 0.278988 3_2:+34997539 Msa0404220:three_prime_UTR
AAATATTCACCTCATGAAAA+AGG 0.287129 3_2:-34997038 None:intergenic
TCGCGCCTTGGCCCTCTCAT+AGG 0.290203 3_2:+34999367 Msa0404220:three_prime_UTR
AAGTGGGCTCTTGAACTAAA+AGG 0.296086 3_2:-34999572 Msa0404230:CDS
ATCACAGATATTCATAATTT+AGG 0.309949 3_2:+34996734 Msa0404220:CDS
ATTTCCCACGTCTTGTAGTT+TGG 0.313223 3_2:-34996542 None:intergenic
TTTGGATTTGATGAGCCTTC+TGG 0.315146 3_2:-34994974 None:intergenic
AATGATCAATAAAGACAAAA+TGG 0.322417 3_2:+34996835 Msa0404220:CDS
GGAGACTCACTCACGTTACT+AGG 0.328682 3_2:-34999626 Msa0404230:CDS
CTGCGAAGAGAAGAAGTATA+TGG 0.336111 3_2:-34994757 None:intergenic
GTTTCATCATTTCATTATAA+GGG 0.337687 3_2:-34995914 None:intergenic
AAATTGCCGCTAAATGTAAA+TGG 0.340649 3_2:-34994607 None:intergenic
CATGTTCAAGCTGAAGTGTT+TGG 0.351636 3_2:+34996989 Msa0404220:three_prime_UTR
GATATTCATAATTTAGGTCT+TGG 0.351730 3_2:+34996740 Msa0404220:CDS
GACATCTTCATCAGCTTAAG+AGG 0.360365 3_2:-34998647 Msa0404230:exon
GGCGTGCATTCTTTGATAAC+AGG 0.364374 3_2:+34998718 Msa0404220:three_prime_UTR
AATCACTAGTGATTCTGATA+TGG 0.369693 3_2:+34999442 Msa0404220:three_prime_UTR
TGTGATGAGGGAGAGCGATA+TGG 0.373547 3_2:+34996044 Msa0404220:CDS
GGCAATGGAGTTTGCGTTGA+AGG 0.373565 3_2:-34994889 None:intergenic
ACAGGTACCTTCTTATAAAC+AGG 0.378107 3_2:+34999485 Msa0404220:three_prime_UTR
AAATGATGAGAATGTTGAAA+TGG 0.383490 3_2:+34996103 Msa0404220:CDS
CCCAGTGAAGCCTTTAAGAA+TGG 0.389532 3_2:-34996879 None:intergenic
GAGCAATCCATAAATTCTAA+TGG 0.389560 3_2:-34996917 None:intergenic
GGCTTTGCTGATATTGCTGT+TGG 0.390337 3_2:-34998850 Msa0404230:CDS
ATGTTCTGTCTTACAACCTT+TGG 0.391181 3_2:+34996012 Msa0404220:CDS
TTCCCTCAAGTCCACTTTCA+AGG 0.391350 3_2:+34998899 Msa0404220:three_prime_UTR
CATGGAGAAGCTCTATGAAC+TGG 0.396411 3_2:+34995872 Msa0404220:CDS
TATTGCCATGAAAAGAGCTT+TGG 0.402179 3_2:+34996610 Msa0404220:CDS
CACTTGACCCTCAGGACAAA+TGG 0.402811 3_2:+34999590 Msa0404220:three_prime_UTR
AACTTCAGAGCATGATCAGC+TGG 0.404901 3_2:-34995705 None:intergenic
TGTAAACAACACGTGTATTA+GGG 0.404953 3_2:-34996968 None:intergenic
GGCTAAATTCGCCGATGATA+AGG 0.406052 3_2:-34999339 Msa0404230:intron
TCCATTCTTAAAGGCTTCAC+TGG 0.406952 3_2:+34996878 Msa0404220:CDS
TAACAAGCTTGGTGAAGCTT+GGG 0.412299 3_2:+34996360 Msa0404220:CDS
CTTAAAGGCTTCACTGGGTA+AGG 0.413189 3_2:+34996884 Msa0404220:CDS
ATCCTTGAAAGTGGACTTGA+GGG 0.416245 3_2:-34998901 Msa0404230:CDS
CCATGGACTCTGTATCAATC+AGG 0.416951 3_2:+34998779 Msa0404220:three_prime_UTR
CTTGAGGGAAGGCGCTACTT+TGG 0.416974 3_2:-34998886 Msa0404230:CDS
AGGAGGGAGTCTTGCGGCTG+TGG 0.422261 3_2:+34996282 Msa0404220:CDS
TAGAGTATGTTGATGAGATC+TGG 0.424571 3_2:-34999418 Msa0404230:CDS
GCTTTCTTTCCAGCTGAGTC+AGG 0.427827 3_2:-34995786 None:intergenic
CAGTAAAGCTGAGACGTTCA+TGG 0.430914 3_2:+34995854 Msa0404220:CDS
TCATTGAAGGATATGTCAAT+TGG 0.432642 3_2:+34996567 Msa0404220:CDS
TTTGCACACAGGTATTCAAC+TGG 0.435844 3_2:+34995652 Msa0404220:intron
GAATGCGTGATTGTAGCGTT+TGG 0.439592 3_2:-34994992 None:intergenic
TGTTAGTATGCAAATATAGT+TGG 0.439822 3_2:-34996342 None:intergenic
TACTTTGGAGGTGAAAATAT+AGG 0.440103 3_2:-34998871 Msa0404230:CDS
ATAACATTTGTTAGAGAACT+AGG 0.446766 3_2:-34999690 Msa0404230:five_prime_UTR
CCAGAAGAATCTTCAGAGAA+TGG 0.455350 3_2:+34996396 Msa0404220:CDS
GTGATGAGGGAGAGCGATAT+GGG 0.460171 3_2:+34996045 Msa0404220:CDS
ATCATTGACCAGCTGAAAAT+GGG 0.460791 3_2:-34997465 None:intergenic
ACATGTAGACAGTTTCTCTT+CGG 0.461851 3_2:-34996207 None:intergenic
TTACCGTCATGCACAAGAAC+AGG 0.465185 3_2:+34999467 Msa0404220:three_prime_UTR
CCAGCTGAAAATGGGACAAT+TGG 0.466279 3_2:-34997457 None:intergenic
AATGATGAGAATGTTGAAAT+GGG 0.468069 3_2:+34996104 Msa0404220:CDS
CGCGCCTTGGCCCTCTCATA+GGG 0.469964 3_2:+34999368 Msa0404220:three_prime_UTR
AGCTGATCATGCTCTGAAGT+TGG 0.470813 3_2:+34995707 Msa0404220:CDS
GCCACGTAGAAGTGGGAGAT+AGG 0.471094 3_2:-34995811 None:intergenic
AGTGGGCTCTTGAACTAAAA+GGG 0.471204 3_2:-34999571 Msa0404230:CDS
CTAACAAGCTTGGTGAAGCT+TGG 0.471247 3_2:+34996359 Msa0404220:CDS
CAGAAGAATCTTCAGAGAAT+GGG 0.472581 3_2:+34996397 Msa0404220:CDS
ACTCACGTTACTAGGGTTCT+GGG 0.475091 3_2:-34999618 Msa0404230:CDS
CTGAATATTTGGAGAAATGT+GGG 0.476542 3_2:+34996687 Msa0404220:CDS
GGATAACTAGGGGTACCTTT+CGG 0.478712 3_2:-34995959 None:intergenic
GAAGGAGGAAAAGCTGCAAT+TGG 0.478844 3_2:+34997587 Msa0404220:three_prime_UTR
GCGGCTGTGGGAAGCCAGTA+AGG 0.479826 3_2:+34996295 Msa0404220:CDS
TGCGAAGAGAAGAAGTATAT+GGG 0.480978 3_2:-34994756 None:intergenic
GTATCACGGCGGTGAGAGAT+TGG 0.481133 3_2:-34994696 None:intergenic
GTTGTAAGACAGAACATTCA+AGG 0.484662 3_2:-34996006 None:intergenic
GAGGGAAGGCGCTACTTTGG+AGG 0.487384 3_2:-34998883 Msa0404230:CDS
CTTCAAAATTGGATCGATCA+AGG 0.488611 3_2:+34994916 Msa0404220:CDS
GCTTTGCTGATATTGCTGTT+GGG 0.489214 3_2:-34998849 Msa0404230:CDS
CAAGAGCCCACTTGACCCTC+AGG 0.492284 3_2:+34999582 Msa0404220:three_prime_UTR
CTATGTTGAAAGACTGCCAT+TGG 0.497964 3_2:+34996633 Msa0404220:CDS
CCACTTCTACGTGGCTATGT+AGG 0.500824 3_2:+34995819 Msa0404220:CDS
GTTTAACCATTTACATTTAG+CGG 0.503561 3_2:+34994601 Msa0404220:five_prime_UTR
ATACGCCTCTTTGAAGCAAA+AGG 0.504517 3_2:+34996262 Msa0404220:CDS
ATATGTCAATTGGCAAAAGA+TGG 0.504962 3_2:+34996577 Msa0404220:CDS
ACGTGGGAAATTCTCATTGA+AGG 0.506864 3_2:+34996554 Msa0404220:CDS
TTCTTTGTGGCGGCCTCCAA+TGG 0.509216 3_2:-34996649 None:intergenic
GCCAATGTGTATATGAAAGC+AGG 0.509662 3_2:+34996149 Msa0404220:CDS
ATGGCTAATACAATTCTTTG+TGG 0.512455 3_2:-34996662 None:intergenic
TTTCTCCAAATATTCAGCTA+TGG 0.517860 3_2:-34996681 None:intergenic
AAGTTATCAACGCAAGCAAA+TGG 0.522118 3_2:+34994576 Msa0404220:five_prime_UTR
ATGCGTATACCTGACTCAGC+TGG 0.523390 3_2:+34995777 Msa0404220:CDS
GGGTAGTCCATTTGTCCTGA+GGG 0.524592 3_2:-34999597 Msa0404230:CDS
CCATTCTTAAAGGCTTCACT+GGG 0.526110 3_2:+34996879 Msa0404220:CDS
GCGATATGGGGTTGCAGCAG+TGG 0.527736 3_2:+34996058 Msa0404220:CDS
GCTGAATATTTGGAGAAATG+TGG 0.530476 3_2:+34996686 Msa0404220:CDS
CCTGATTGATACAGAGTCCA+TGG 0.533258 3_2:-34998779 Msa0404230:CDS
GTAGAATCTGGAAAAGAAGA+TGG 0.534042 3_2:+34997551 Msa0404220:three_prime_UTR
CACACAGGTATTCAACTGGA+TGG 0.535536 3_2:+34995656 Msa0404220:intron
AATTTGAAGATCCTTGAAAG+TGG 0.535582 3_2:-34998910 Msa0404230:CDS
TGGATGAGTGCTTGTGATGA+GGG 0.538983 3_2:+34996032 Msa0404220:CDS
ACGCTACAATCACGCATTCG+AGG 0.542785 3_2:+34994996 Msa0404220:CDS
TCTGCCGTGAAGTGCTTCAT+CGG 0.544003 3_2:+34994648 Msa0404220:five_prime_UTR
GGGGTAGTCCATTTGTCCTG+AGG 0.544193 3_2:-34999598 Msa0404230:CDS
GTATAATCCTGTTTATAAGA+AGG 0.544339 3_2:-34999492 Msa0404230:CDS
TACGTGGCTATGTAGGAGAT+AGG 0.544359 3_2:+34995826 Msa0404220:CDS
CTCTCACCGCCGTGATACGA+CGG 0.545445 3_2:+34994701 Msa0404220:CDS
TTTAGCCCAAAATCGCGCCT+TGG 0.545817 3_2:+34999355 Msa0404220:three_prime_UTR
GTCGCCGATGAAGCACTTCA+CGG 0.546136 3_2:-34994652 None:intergenic
AAGAAAGTCATCGAAGTAAG+TGG 0.546614 3_2:+34998747 Msa0404220:three_prime_UTR
TGGTTCGCCATCTGAAGCTA+CGG 0.548716 3_2:-34994676 None:intergenic
CAATAAAGACAAAATGGAGA+TGG 0.549030 3_2:+34996841 Msa0404220:CDS
CATTTGTCCTGAGGGTCAAG+TGG 0.551709 3_2:-34999589 Msa0404230:CDS
AGGTAACAAGCTTTCATCAT+CGG 0.555005 3_2:+34994936 Msa0404220:CDS
TGTTGAAAGACTGCCATTGG+AGG 0.555843 3_2:+34996636 Msa0404220:CDS
TATTTGCATACTAACAAGCT+TGG 0.557592 3_2:+34996349 Msa0404220:CDS
ATGAGAATGTTGAAATGGGA+TGG 0.563565 3_2:+34996108 Msa0404220:CDS
TCCTGCTTTCATATACACAT+TGG 0.565526 3_2:-34996150 None:intergenic
TTAGGAGCATATGTGCGGAA+TGG 0.567056 3_2:+34996464 Msa0404220:CDS
AACTAGGAATGAGAAAGAGC+AGG 0.568013 3_2:-34999674 Msa0404230:five_prime_UTR
GCATCTCCACACATTGCAGA+AGG 0.568052 3_2:+34996511 Msa0404220:CDS
ATGGAGAAGCTCTATGAACT+GGG 0.568445 3_2:+34995873 Msa0404220:CDS
CTGTCTACATGTAATCGTCT+TGG 0.569357 3_2:+34996218 Msa0404220:CDS
CATGATCAGCTGGGTTTATG+CGG 0.572059 3_2:-34995695 None:intergenic
ATTTGTCCTGAGGGTCAAGT+GGG 0.573803 3_2:-34999588 Msa0404230:CDS
CGTGTCGTACCGTCGTATCA+CGG 0.574617 3_2:-34994710 None:intergenic
GCCCTCTCATAGGGATCATG+TGG 0.575393 3_2:+34999377 Msa0404220:three_prime_UTR
GAAGCCAGTAAGGCAGTTGG+TGG 0.575582 3_2:+34996305 Msa0404220:CDS
TAGGGATCATGTGGAAGAAG+AGG 0.575719 3_2:+34999386 Msa0404220:three_prime_UTR
GCTCTATGAACTGGGGCTAG+TGG 0.575872 3_2:+34995881 Msa0404220:CDS
CGCCTCTTTGAAGCAAAAGG+AGG 0.583122 3_2:+34996265 Msa0404220:CDS
GAGACTCACTCACGTTACTA+GGG 0.583299 3_2:-34999625 Msa0404230:CDS
TTGGATGAGTGCTTGTGATG+AGG 0.583463 3_2:+34996031 Msa0404220:CDS
CCTACATAGCCACGTAGAAG+TGG 0.584375 3_2:-34995819 None:intergenic
ACTTCAGAGCATGATCAGCT+GGG 0.585003 3_2:-34995704 None:intergenic
GATCCTTGAAAGTGGACTTG+AGG 0.587591 3_2:-34998902 Msa0404230:CDS
GTAAGTGGTAAGTTTAGCCA+TGG 0.594981 3_2:+34998762 Msa0404220:three_prime_UTR
AACTGAGATGCATCTCCAGA+AGG 0.596914 3_2:+34994959 Msa0404220:CDS
ACGTGGCTATGTAGGAGATA+GGG 0.597576 3_2:+34995827 Msa0404220:CDS
GGAGGGAGTCTTGCGGCTGT+GGG 0.599301 3_2:+34996283 Msa0404220:CDS
AATAGGAGAGGAACAACAGA+AGG 0.601970 3_2:-34998953 Msa0404230:CDS
CATCACAAGCACTCATCCAA+AGG 0.605501 3_2:-34996028 None:intergenic
TTTATTTGTTGGATAACTAG+GGG 0.607266 3_2:-34995969 None:intergenic
GGCGACGCCGTAGCTTCAGA+TGG 0.607322 3_2:+34994669 Msa0404220:exon
GCTAATACAATTCTTTGTGG+CGG 0.610024 3_2:-34996659 None:intergenic
AGCCACCCTTCTGCAATGTG+TGG 0.612657 3_2:-34996517 None:intergenic
GCCTCTTTGAAGCAAAAGGA+GGG 0.615558 3_2:+34996266 Msa0404220:CDS
TCCACATGATCCCTATGAGA+GGG 0.621697 3_2:-34999378 Msa0404230:CDS
GTTCAAGCTGAAGTGTTTGG+AGG 0.622053 3_2:+34996992 Msa0404220:three_prime_UTR
GATGGTCACCAACCAACTGA+AGG 0.622078 3_2:+34997569 Msa0404220:three_prime_UTR
ATGAAGATGTCAAGACCTTG+TGG 0.622264 3_2:+34998659 Msa0404220:three_prime_UTR
AACAAGCTTGGTGAAGCTTG+GGG 0.626479 3_2:+34996361 Msa0404220:CDS
TGGGAAGCCAGTAAGGCAGT+TGG 0.629575 3_2:+34996302 Msa0404220:CDS
CATCTCCACACATTGCAGAA+GGG 0.629974 3_2:+34996512 Msa0404220:CDS
GTGGGCTCTTGAACTAAAAG+GGG 0.630143 3_2:-34999570 Msa0404230:CDS
TTCCACATGATCCCTATGAG+AGG 0.630417 3_2:-34999379 Msa0404230:CDS
CTCCACACATTGCAGAAGGG+TGG 0.631048 3_2:+34996515 Msa0404220:CDS
TTGTAAGACAGAACATTCAA+GGG 0.631305 3_2:-34996005 None:intergenic
CTACATAGCCACGTAGAAGT+GGG 0.632992 3_2:-34995818 None:intergenic
GGTCACCAACCAACTGAAGG+AGG 0.633472 3_2:+34997572 Msa0404220:three_prime_UTR
TTGAAAGTGGACTTGAGGGA+AGG 0.636293 3_2:-34998897 Msa0404230:CDS
GCTGTCCAAACTACAAGACG+TGG 0.636885 3_2:+34996537 Msa0404220:CDS
TACCTTTCGGTACTCACATG+TGG 0.641449 3_2:-34995946 None:intergenic
GCACAGCAAGGCCTTCCACA+AGG 0.644456 3_2:-34998674 Msa0404230:CDS
AGATGTCAAGACCTTGTGGA+AGG 0.645290 3_2:+34998663 Msa0404220:three_prime_UTR
CTCACGTTACTAGGGTTCTG+GGG 0.648274 3_2:-34999617 Msa0404230:CDS
TCAAGTAACTTATCATGAGA+CGG 0.652385 3_2:+34998697 Msa0404220:three_prime_UTR
TGATCCCTATGAGAGGGCCA+AGG 0.658261 3_2:-34999372 Msa0404230:CDS
CAATTGGCAAAAGATGGATG+AGG 0.660417 3_2:+34996583 Msa0404220:CDS
ACGTAGAAGTGGGAGATAGG+CGG 0.666086 3_2:-34995808 None:intergenic
AAGGTGGTTCTTGAGCAGAA+AGG 0.666643 3_2:-34996799 None:intergenic
GCGAAGAGAAGAAGTATATG+GGG 0.666763 3_2:-34994755 None:intergenic
AGCAAAAGGAGGGAGTCTTG+CGG 0.669308 3_2:+34996276 Msa0404220:CDS
TAAGTTACTTGAGCACAGCA+AGG 0.675812 3_2:-34998686 Msa0404230:CDS
TGCCACATGTGAGTACCGAA+AGG 0.679332 3_2:+34995944 Msa0404220:CDS
GTACCTGTTCTTGTGCATGA+CGG 0.690851 3_2:-34999470 Msa0404230:CDS
GCCTATCTCCCACTTCTACG+TGG 0.702332 3_2:+34995810 Msa0404220:CDS
TGGAGAAGCTCTATGAACTG+GGG 0.707353 3_2:+34995874 Msa0404220:CDS
CGAGTGATAGAAGAAACTGT+AGG 0.708991 3_2:-34998808 Msa0404230:CDS
CTGTCCAAACTACAAGACGT+GGG 0.720216 3_2:+34996538 Msa0404220:CDS
TGATGAGGGAGAGCGATATG+GGG 0.743042 3_2:+34996046 Msa0404220:CDS
GTCGTACCGTCGTATCACGG+CGG 0.782153 3_2:-34994707 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTTATTAATTCAGTA+CGG + chr3_2:34997332-34997351 Msa0404220:intron 10.0%
!!! ATATTTATTTTCCTTTTACA+TGG + chr3_2:34998240-34998259 Msa0404220:intron 15.0%
!!! TATTTATTTTCCTTTTACAT+GGG + chr3_2:34998241-34998260 Msa0404220:intron 15.0%
!!! TATATTATTTTCCTTTATCA+TGG + chr3_2:34998297-34998316 Msa0404220:intron 15.0%
!! ATAGAATACTATAATATCAA+GGG - chr3_2:34998336-34998355 Msa0404230:three_prime_UTR 15.0%
!! TTGATATTATAGTATTCTAT+GGG + chr3_2:34998336-34998355 Msa0404220:intron 15.0%
!!! CTTGTAAAAGTAATTTTAAT+GGG - chr3_2:34998393-34998412 Msa0404230:three_prime_UTR 15.0%
!!! TCTTGTAAAAGTAATTTTAA+TGG - chr3_2:34998394-34998413 Msa0404230:three_prime_UTR 15.0%
!! TATAACATATTGTATTGTAT+AGG + chr3_2:34998614-34998633 Msa0404220:intron 15.0%
!!! TGATGATGTACTTTTTATTT+TGG + chr3_2:34995342-34995361 Msa0404220:intron 20.0%
!! GTTTCATCATTTCATTATAA+GGG - chr3_2:34995917-34995936 None:intergenic 20.0%
!! AGTTTCATCATTTCATTATA+AGG - chr3_2:34995918-34995937 None:intergenic 20.0%
!!! TTTTATTTGTTGGATAACTA+GGG - chr3_2:34995973-34995992 None:intergenic 20.0%
!!! CTTTATTTCGTTTTATTTGT+TGG - chr3_2:34995983-34996002 None:intergenic 20.0%
!! ATCACAGATATTCATAATTT+AGG + chr3_2:34996734-34996753 Msa0404220:CDS 20.0%
!!! TGTCTTTATTGATCATTTTA+AGG - chr3_2:34996832-34996851 None:intergenic 20.0%
!! AATGATCAATAAAGACAAAA+TGG + chr3_2:34996835-34996854 Msa0404220:CDS 20.0%
!! ATCTAATCCATTAGAATTTA+TGG + chr3_2:34996910-34996929 Msa0404220:three_prime_UTR 20.0%
!!! ATTTTTTTGTGTAGTTAAGA+AGG + chr3_2:34997232-34997251 Msa0404220:intron 20.0%
!!! TTTCTATGATTTTGAAAACT+GGG - chr3_2:34997301-34997320 None:intergenic 20.0%
!! GTTAACAATAACATAAATCT+TGG + chr3_2:34997354-34997373 Msa0404220:intron 20.0%
!! TAAAAAAGAATGTTAGGAAT+AGG - chr3_2:34997433-34997452 None:intergenic 20.0%
!!! TGAATTTAATGAAGTTTTGA+AGG + chr3_2:34997875-34997894 Msa0404220:intron 20.0%
!! CATAGAATACTATAATATCA+AGG - chr3_2:34998337-34998356 Msa0404230:three_prime_UTR 20.0%
!! CTTGATATTATAGTATTCTA+TGG + chr3_2:34998335-34998354 Msa0404220:intron 20.0%
!! TGATATTATAGTATTCTATG+GGG + chr3_2:34998337-34998356 Msa0404220:intron 20.0%
!! ATTAACATATTGCATGATAT+TGG + chr3_2:34998532-34998551 Msa0404220:intron 20.0%
!!! AATATGTTGAAGAAGATTTT+AGG - chr3_2:34999541-34999560 Msa0404230:CDS 20.0%
!! TAAAATCTTCTTCAACATAT+TGG + chr3_2:34999540-34999559 Msa0404220:three_prime_UTR 20.0%
!! TGTTTGATTAAAAGCAAAAA+TGG - chr3_2:34999654-34999673 Msa0404230:exon 20.0%
! GTTTAACCATTTACATTTAG+CGG + chr3_2:34994601-34994620 Msa0404220:five_prime_UTR 25.0%
!!! AGTTCTAAAGTAGTTAATTG+TGG + chr3_2:34995070-34995089 Msa0404220:intron 25.0%
! AGTAGTAAATGAAAATGACA+AGG + chr3_2:34995167-34995186 Msa0404220:intron 25.0%
! GTAGTAAATGAAAATGACAA+GGG + chr3_2:34995168-34995187 Msa0404220:intron 25.0%
!!! ATTTAGTTTGTTGCTTATGT+TGG + chr3_2:34995272-34995291 Msa0404220:intron 25.0%
!!! TGTTTAGCTTATGCTTTTAT+AGG + chr3_2:34995300-34995319 Msa0404220:intron 25.0%
!!! TGATGTACTTTTTATTTTGG+AGG + chr3_2:34995345-34995364 Msa0404220:intron 25.0%
! TGTTATTGCAATGTGATTTA+TGG + chr3_2:34995573-34995592 Msa0404220:intron 25.0%
! GTTATTGCAATGTGATTTAT+GGG + chr3_2:34995574-34995593 Msa0404220:intron 25.0%
!! TTAATTATTCTTTTGCACAC+AGG + chr3_2:34995641-34995660 Msa0404220:intron 25.0%
!! TTTATTTGTTGGATAACTAG+GGG - chr3_2:34995972-34995991 None:intergenic 25.0%
!!! GTTTTATTTGTTGGATAACT+AGG - chr3_2:34995974-34995993 None:intergenic 25.0%
! AAATGATGAGAATGTTGAAA+TGG + chr3_2:34996103-34996122 Msa0404220:CDS 25.0%
! AATGATGAGAATGTTGAAAT+GGG + chr3_2:34996104-34996123 Msa0404220:CDS 25.0%
! TGTTAGTATGCAAATATAGT+TGG - chr3_2:34996345-34996364 None:intergenic 25.0%
! GATATTCATAATTTAGGTCT+TGG + chr3_2:34996740-34996759 Msa0404220:CDS 25.0%
!!! TATTGATCATTTTAAGGACA+TGG - chr3_2:34996826-34996845 None:intergenic 25.0%
! AAATATTCACCTCATGAAAA+AGG - chr3_2:34997041-34997060 None:intergenic 25.0%
!!! CTGCTAGTCTTTATAAAAAT+GGG - chr3_2:34997181-34997200 None:intergenic 25.0%
!!! GTTTCTATGATTTTGAAAAC+TGG - chr3_2:34997302-34997321 None:intergenic 25.0%
! AATCAACAAAGATAAAGAAG+TGG - chr3_2:34997404-34997423 None:intergenic 25.0%
! ACTTCTTTATCTTTGTTGAT+TGG + chr3_2:34997403-34997422 Msa0404220:intron 25.0%
! GAAGACAGAGTATAAATTAA+TGG + chr3_2:34997506-34997525 Msa0404220:three_prime_UTR 25.0%
! TTTGGTATATTTGTAGAATC+TGG + chr3_2:34997539-34997558 Msa0404220:three_prime_UTR 25.0%
! AAAATAGACGAGTAAACAAA+AGG - chr3_2:34997641-34997660 None:intergenic 25.0%
! AACATATAGAGTATGTTTAG+TGG - chr3_2:34998028-34998047 None:intergenic 25.0%
! CTAAATCATAAATGACTCTT+GGG - chr3_2:34998205-34998224 None:intergenic 25.0%
! ACTAAATCATAAATGACTCT+TGG - chr3_2:34998206-34998225 None:intergenic 25.0%
! TCATTTATGATTTAGTGAGA+AGG + chr3_2:34998210-34998229 Msa0404220:intron 25.0%
! TAATGATTCTTCCATGATAA+AGG - chr3_2:34998311-34998330 None:intergenic 25.0%
! TAACGTCTTGATTAAATAAG+CGG + chr3_2:34998364-34998383 Msa0404220:intron 25.0%
!!! TGTGTTTACATGATTAGTTT+AGG + chr3_2:34998438-34998457 Msa0404220:intron 25.0%
!!! ATAGCTACCTTTTTCAAAAT+AGG - chr3_2:34998973-34998992 Msa0404230:CDS 25.0%
!!! CTTTTGAGTAATGGTTTAAT+TGG + chr3_2:34999159-34999178 Msa0404220:intron 25.0%
! GTATAATCCTGTTTATAAGA+AGG - chr3_2:34999495-34999514 Msa0404230:CDS 25.0%
AAATTGCCGCTAAATGTAAA+TGG - chr3_2:34994610-34994629 None:intergenic 30.0%
!! ATTACTAGCTTTAGCCATAT+AGG + chr3_2:34995096-34995115 Msa0404220:intron 30.0%
!! TTACTAGCTTTAGCCATATA+GGG + chr3_2:34995097-34995116 Msa0404220:intron 30.0%
ACAGAAATTCAACAGAGAAA+TGG - chr3_2:34995207-34995226 None:intergenic 30.0%
ATTTCCAAAAAACCTTCAAG+CGG - chr3_2:34995242-34995261 None:intergenic 30.0%
GCTATAGTGAAGTGATTATA+AGG - chr3_2:34995449-34995468 None:intergenic 30.0%
AAGCTGTAATCAATCCATAA+TGG - chr3_2:34995503-34995522 None:intergenic 30.0%
AAGATACTGTAACTGATCAT+CGG + chr3_2:34995528-34995547 Msa0404220:intron 30.0%
AGTTAATCGCTAAAAACTGT+GGG + chr3_2:34995730-34995749 Msa0404220:CDS 30.0%
TTGTAAGACAGAACATTCAA+GGG - chr3_2:34996008-34996027 None:intergenic 30.0%
!!! GGCATTTTTTAGAACTAGAA+TGG - chr3_2:34996189-34996208 None:intergenic 30.0%
TATTTGCATACTAACAAGCT+TGG + chr3_2:34996349-34996368 Msa0404220:CDS 30.0%
! AGAGTCTCTAATGTTCTTTT+AGG + chr3_2:34996446-34996465 Msa0404220:CDS 30.0%
TCATTGAAGGATATGTCAAT+TGG + chr3_2:34996567-34996586 Msa0404220:CDS 30.0%
ATATGTCAATTGGCAAAAGA+TGG + chr3_2:34996577-34996596 Msa0404220:CDS 30.0%
ATGGCTAATACAATTCTTTG+TGG - chr3_2:34996665-34996684 None:intergenic 30.0%
ATTAGCCATAGCTGAATATT+TGG + chr3_2:34996676-34996695 Msa0404220:CDS 30.0%
TTTCTCCAAATATTCAGCTA+TGG - chr3_2:34996684-34996703 None:intergenic 30.0%
CTGAATATTTGGAGAAATGT+GGG + chr3_2:34996687-34996706 Msa0404220:CDS 30.0%
!! ATCATTTTAAGGACATGGAA+AGG - chr3_2:34996821-34996840 None:intergenic 30.0%
CAATAAAGACAAAATGGAGA+TGG + chr3_2:34996841-34996860 Msa0404220:CDS 30.0%
GAGCAATCCATAAATTCTAA+TGG - chr3_2:34996920-34996939 None:intergenic 30.0%
TGTAAACAACACGTGTATTA+GGG - chr3_2:34996971-34996990 None:intergenic 30.0%
ATGTAAACAACACGTGTATT+AGG - chr3_2:34996972-34996991 None:intergenic 30.0%
! TATGTGATAATGTTGCACTT+TGG - chr3_2:34997134-34997153 None:intergenic 30.0%
!! GCTGCTAGTCTTTATAAAAA+TGG - chr3_2:34997182-34997201 None:intergenic 30.0%
!!! TGGTGATTTTAGTTGAATAG+TGG + chr3_2:34997374-34997393 Msa0404220:intron 30.0%
GGCTGATAAAAAAGAATGTT+AGG - chr3_2:34997439-34997458 None:intergenic 30.0%
! ATTAATGGCTATCAAGCTTT+TGG + chr3_2:34997521-34997540 Msa0404220:three_prime_UTR 30.0%
!! ACGAGTAAACAAAAGGTATT+GGG - chr3_2:34997634-34997653 None:intergenic 30.0%
TAGGTGAAAAATTCAAACCT+CGG + chr3_2:34997844-34997863 Msa0404220:intron 30.0%
TTAAATTCAAAACTGTACCG+AGG - chr3_2:34997864-34997883 None:intergenic 30.0%
AACATAAAGGCTAATAGACA+TGG - chr3_2:34998105-34998124 None:intergenic 30.0%
TATTCTATCTCCCATGTAAA+AGG - chr3_2:34998254-34998273 None:intergenic 30.0%
GATGTGTGTGTATGATATAT+GGG - chr3_2:34998567-34998586 Msa0404230:three_prime_UTR 30.0%
TGATGTGTGTGTATGATATA+TGG - chr3_2:34998568-34998587 Msa0404230:three_prime_UTR 30.0%
CATATTGTATTGTATAGGTG+TGG + chr3_2:34998619-34998638 Msa0404220:intron 30.0%
TCAAGTAACTTATCATGAGA+CGG + chr3_2:34998697-34998716 Msa0404220:three_prime_UTR 30.0%
! TACTTTGGAGGTGAAAATAT+AGG - chr3_2:34998874-34998893 Msa0404230:CDS 30.0%
AATTTGAAGATCCTTGAAAG+TGG - chr3_2:34998913-34998932 Msa0404230:CDS 30.0%
!! TTCCTCTCCTATTTTGAAAA+AGG + chr3_2:34998963-34998982 Msa0404220:three_prime_UTR 30.0%
!!! TACCTTTTTCAAAATAGGAG+AGG - chr3_2:34998968-34998987 Msa0404230:CDS 30.0%
AAAAAGGTAGCTATAAATGC+TGG + chr3_2:34998979-34998998 Msa0404220:three_prime_UTR 30.0%
!!! AAGGTTGGTTTTTGTATTAG+AGG + chr3_2:34999019-34999038 Msa0404220:intron 30.0%
!! ATGTTGAGACTTTTGAGTAA+TGG + chr3_2:34999150-34999169 Msa0404220:intron 30.0%
! ATCATGTTCTTTAGAAGTCA+TGG + chr3_2:34999308-34999327 Msa0404220:intron 30.0%
! TGGCTTTTATACCTTATCAT+CGG + chr3_2:34999328-34999347 Msa0404220:intron 30.0%
AATCACTAGTGATTCTGATA+TGG + chr3_2:34999442-34999461 Msa0404220:three_prime_UTR 30.0%
TGATTAAAAGCAAAAATGGC+AGG - chr3_2:34999650-34999669 Msa0404230:exon 30.0%
AAGTTATCAACGCAAGCAAA+TGG + chr3_2:34994576-34994595 Msa0404220:five_prime_UTR 35.0%
! TGCGAAGAGAAGAAGTATAT+GGG - chr3_2:34994759-34994778 None:intergenic 35.0%
! AGCAGCATCAGTTTCTTTTT+GGG + chr3_2:34994778-34994797 Msa0404220:CDS 35.0%
CTTCAAAATTGGATCGATCA+AGG + chr3_2:34994916-34994935 Msa0404220:CDS 35.0%
AGGTAACAAGCTTTCATCAT+CGG + chr3_2:34994936-34994955 Msa0404220:CDS 35.0%
TTACATTCCTGCAATTTGTG+TGG + chr3_2:34995042-34995061 Msa0404220:intron 35.0%
CTTTAGCCATATAGGGTTTA+GGG + chr3_2:34995104-34995123 Msa0404220:intron 35.0%
CATAAACCCTAAACCCTATA+TGG - chr3_2:34995113-34995132 None:intergenic 35.0%
TTTCCAAAAAACCTTCAAGC+GGG - chr3_2:34995241-34995260 None:intergenic 35.0%
! CACTTCACTATAGCATTTTG+TGG + chr3_2:34995455-34995474 Msa0404220:intron 35.0%
!! TTTTGTGGATTAATCGCTTC+AGG + chr3_2:34995470-34995489 Msa0404220:intron 35.0%
! GGTTTATGCGGAATTTTTGT+TGG - chr3_2:34995686-34995705 None:intergenic 35.0%
GAGTTAATCGCTAAAAACTG+TGG + chr3_2:34995729-34995748 Msa0404220:CDS 35.0%
GTTGTAAGACAGAACATTCA+AGG - chr3_2:34996009-34996028 None:intergenic 35.0%
ATGTTCTGTCTTACAACCTT+TGG + chr3_2:34996012-34996031 Msa0404220:CDS 35.0%
ATGAGAATGTTGAAATGGGA+TGG + chr3_2:34996108-34996127 Msa0404220:CDS 35.0%
TCCTGCTTTCATATACACAT+TGG - chr3_2:34996153-34996172 None:intergenic 35.0%
ACATGTAGACAGTTTCTCTT+CGG - chr3_2:34996210-34996229 None:intergenic 35.0%
CAGAAGAATCTTCAGAGAAT+GGG + chr3_2:34996397-34996416 Msa0404220:CDS 35.0%
!! TTCTTTTAGGAGCATATGTG+CGG + chr3_2:34996459-34996478 Msa0404220:CDS 35.0%
TATTGCCATGAAAAGAGCTT+TGG + chr3_2:34996610-34996629 Msa0404220:CDS 35.0%
GCTAATACAATTCTTTGTGG+CGG - chr3_2:34996662-34996681 None:intergenic 35.0%
GCTGAATATTTGGAGAAATG+TGG + chr3_2:34996686-34996705 Msa0404220:CDS 35.0%
!! ATTTTAAGGACATGGAAAGG+TGG - chr3_2:34996818-34996837 None:intergenic 35.0%
GAGACTGTTTCCATTCTTAA+AGG + chr3_2:34996869-34996888 Msa0404220:CDS 35.0%
!! TGAAGTCAACCTTTTTCATG+AGG + chr3_2:34997029-34997048 Msa0404220:three_prime_UTR 35.0%
!! CTATGATTTTGAAAACTGGG+AGG - chr3_2:34997298-34997317 None:intergenic 35.0%
ATCATTGACCAGCTGAAAAT+GGG - chr3_2:34997468-34997487 None:intergenic 35.0%
AATCATTGACCAGCTGAAAA+TGG - chr3_2:34997469-34997488 None:intergenic 35.0%
GTAGAATCTGGAAAAGAAGA+TGG + chr3_2:34997551-34997570 Msa0404220:three_prime_UTR 35.0%
!! CGAGTAAACAAAAGGTATTG+GGG - chr3_2:34997633-34997652 None:intergenic 35.0%
! GACGAGTAAACAAAAGGTAT+TGG - chr3_2:34997635-34997654 None:intergenic 35.0%
TATACTTTCCCAGGTTAACA+GGG - chr3_2:34997709-34997728 None:intergenic 35.0%
ATATACTTTCCCAGGTTAAC+AGG - chr3_2:34997710-34997729 None:intergenic 35.0%
! TGTTAACCTGGGAAAGTATA+TGG + chr3_2:34997709-34997728 Msa0404220:intron 35.0%
! GTTAACCTGGGAAAGTATAT+GGG + chr3_2:34997710-34997729 Msa0404220:intron 35.0%
ATATTCCCATATACTTTCCC+AGG - chr3_2:34997718-34997737 None:intergenic 35.0%
GAGTATCTAGTCATCTAACA+CGG - chr3_2:34997806-34997825 None:intergenic 35.0%
TATAGCTAGCAATGAAGGTA+TGG - chr3_2:34997988-34998007 None:intergenic 35.0%
GAAGAGGAAACGAAACATAA+AGG - chr3_2:34998118-34998137 None:intergenic 35.0%
CATAAATGACTCTTGGGATA+AGG - chr3_2:34998199-34998218 None:intergenic 35.0%
! ATTAGTTTAGGTTTGAGCTC+AGG + chr3_2:34998450-34998469 Msa0404220:intron 35.0%
TGTGTGTATGATAATATGCG+TGG - chr3_2:34998497-34998516 Msa0404230:three_prime_UTR 35.0%
AAGAAAGTCATCGAAGTAAG+TGG + chr3_2:34998747-34998766 Msa0404220:three_prime_UTR 35.0%
!!! TGTTGGGTTTTTTGGATTCT+GGG - chr3_2:34998836-34998855 Msa0404230:CDS 35.0%
!!! GATATTGCTGTTGGGTTTTT+TGG - chr3_2:34998844-34998863 Msa0404230:CDS 35.0%
CACACTGAAATAGAAAAGGT+TGG + chr3_2:34999004-34999023 Msa0404220:intron 35.0%
!! TTGGTTTTTGTATTAGAGGC+TGG + chr3_2:34999023-34999042 Msa0404220:intron 35.0%
GATCAAACCAAACATCAAGT+TGG + chr3_2:34999252-34999271 Msa0404220:intron 35.0%
! TAGAGTATGTTGATGAGATC+TGG - chr3_2:34999421-34999440 Msa0404230:CDS 35.0%
ACAGGTACCTTCTTATAAAC+AGG + chr3_2:34999485-34999504 Msa0404220:three_prime_UTR 35.0%
! CATTTAGCGGCAATTTTCTG+TGG + chr3_2:34994614-34994633 Msa0404220:five_prime_UTR 40.0%
! GCGAAGAGAAGAAGTATATG+GGG - chr3_2:34994758-34994777 None:intergenic 40.0%
! CTGCGAAGAGAAGAAGTATA+TGG - chr3_2:34994760-34994779 None:intergenic 40.0%
! CAGCAGCATCAGTTTCTTTT+TGG + chr3_2:34994777-34994796 Msa0404220:CDS 40.0%
!!! CAATTTTGAAGCACTGGCAA+TGG - chr3_2:34994907-34994926 None:intergenic 40.0%
CATTGCCAGTGCTTCAAAAT+TGG + chr3_2:34994905-34994924 Msa0404220:CDS 40.0%
!!! TCGATCCAATTTTGAAGCAC+TGG - chr3_2:34994913-34994932 None:intergenic 40.0%
TTTGGATTTGATGAGCCTTC+TGG - chr3_2:34994977-34994996 None:intergenic 40.0%
GCTTTAGCCATATAGGGTTT+AGG + chr3_2:34995103-34995122 Msa0404220:intron 40.0%
! ATTTTCCTTTTCCCGCTTGA+AGG + chr3_2:34995227-34995246 Msa0404220:intron 40.0%
AAAAACCTTCAAGCGGGAAA+AGG - chr3_2:34995235-34995254 None:intergenic 40.0%
!!! TTTCCCGCTTGAAGGTTTTT+TGG + chr3_2:34995235-34995254 Msa0404220:intron 40.0%
GCTCAATACGCTGAACTTAA+AGG - chr3_2:34995398-34995417 None:intergenic 40.0%
! CTTCAGGCTACTTTCCATTA+TGG + chr3_2:34995486-34995505 Msa0404220:intron 40.0%
TTTGCACACAGGTATTCAAC+TGG + chr3_2:34995652-34995671 Msa0404220:intron 40.0%
ATGGAGAAGCTCTATGAACT+GGG + chr3_2:34995873-34995892 Msa0404220:CDS 40.0%
GCCAATGTGTATATGAAAGC+AGG + chr3_2:34996149-34996168 Msa0404220:CDS 40.0%
CTGTCTACATGTAATCGTCT+TGG + chr3_2:34996218-34996237 Msa0404220:CDS 40.0%
!! ATACGCCTCTTTGAAGCAAA+AGG + chr3_2:34996262-34996281 Msa0404220:CDS 40.0%
! TAACAAGCTTGGTGAAGCTT+GGG + chr3_2:34996360-34996379 Msa0404220:CDS 40.0%
! CCATTCTCTGAAGATTCTTC+TGG - chr3_2:34996399-34996418 None:intergenic 40.0%
CCAGAAGAATCTTCAGAGAA+TGG + chr3_2:34996396-34996415 Msa0404220:CDS 40.0%
ATTTCCCACGTCTTGTAGTT+TGG - chr3_2:34996545-34996564 None:intergenic 40.0%
ACGTGGGAAATTCTCATTGA+AGG + chr3_2:34996554-34996573 Msa0404220:CDS 40.0%
CAATTGGCAAAAGATGGATG+AGG + chr3_2:34996583-34996602 Msa0404220:CDS 40.0%
! CATAGCCAAAGCTCTTTTCA+TGG - chr3_2:34996618-34996637 None:intergenic 40.0%
CTATGTTGAAAGACTGCCAT+TGG + chr3_2:34996633-34996652 Msa0404220:CDS 40.0%
TCCATTCTTAAAGGCTTCAC+TGG + chr3_2:34996878-34996897 Msa0404220:CDS 40.0%
CCATTCTTAAAGGCTTCACT+GGG + chr3_2:34996879-34996898 Msa0404220:CDS 40.0%
! CATGTTCAAGCTGAAGTGTT+TGG + chr3_2:34996989-34997008 Msa0404220:three_prime_UTR 40.0%
TATCATCATGTTCTCACGGA+TGG - chr3_2:34997685-34997704 None:intergenic 40.0%
GGGTTATCATCATGTTCTCA+CGG - chr3_2:34997689-34997708 None:intergenic 40.0%
TGATGATAACCCTGTTAACC+TGG + chr3_2:34997697-34997716 Msa0404220:intron 40.0%
GATGATAACCCTGTTAACCT+GGG + chr3_2:34997698-34997717 Msa0404220:intron 40.0%
CATTCTCCATTTAGATTGCC+AGG + chr3_2:34997777-34997796 Msa0404220:intron 40.0%
! CATAAGGGCAGTTTTCTAAC+AGG - chr3_2:34997936-34997955 None:intergenic 40.0%
TCATCGCTACATCAGCATAA+GGG - chr3_2:34997951-34997970 None:intergenic 40.0%
ATCATCGCTACATCAGCATA+AGG - chr3_2:34997952-34997971 None:intergenic 40.0%
TTATGCTGATGTAGCGATGA+TGG + chr3_2:34997951-34997970 Msa0404220:intron 40.0%
CGTGATATAGCTAGCAATGA+AGG - chr3_2:34997993-34998012 None:intergenic 40.0%
ACATCGCAATTCAACTGAAG+AGG - chr3_2:34998134-34998153 None:intergenic 40.0%
! ATACTCTTCAGCCTTATCCA+AGG + chr3_2:34998164-34998183 Msa0404220:intron 40.0%
GACATCTTCATCAGCTTAAG+AGG - chr3_2:34998650-34998669 Msa0404230:exon 40.0%
ATGAAGATGTCAAGACCTTG+TGG + chr3_2:34998659-34998678 Msa0404220:three_prime_UTR 40.0%
TAAGTTACTTGAGCACAGCA+AGG - chr3_2:34998689-34998708 Msa0404230:CDS 40.0%
GTAAGTGGTAAGTTTAGCCA+TGG + chr3_2:34998762-34998781 Msa0404220:three_prime_UTR 40.0%
CGAGTGATAGAAGAAACTGT+AGG - chr3_2:34998811-34998830 Msa0404230:CDS 40.0%
!!! CTGTTGGGTTTTTTGGATTC+TGG - chr3_2:34998837-34998856 Msa0404230:CDS 40.0%
! GCTTTGCTGATATTGCTGTT+GGG - chr3_2:34998852-34998871 Msa0404230:CDS 40.0%
! ATCCTTGAAAGTGGACTTGA+GGG - chr3_2:34998904-34998923 Msa0404230:CDS 40.0%
AATAGGAGAGGAACAACAGA+AGG - chr3_2:34998956-34998975 Msa0404230:CDS 40.0%
GGCACACACTGAAATAGAAA+AGG + chr3_2:34999000-34999019 Msa0404220:intron 40.0%
AGTCTCAACATTTCGATCTC+TGG - chr3_2:34999141-34999160 Msa0404230:intron 40.0%
CCAGAAACCAACTTGATGTT+TGG - chr3_2:34999262-34999281 Msa0404230:intron 40.0%
!! CCAAACATCAAGTTGGTTTC+TGG + chr3_2:34999259-34999278 Msa0404220:intron 40.0%
GTTCAACCATTTGAACCAGA+CGG + chr3_2:34999281-34999300 Msa0404220:intron 40.0%
! ATCAAACCGTCTGGTTCAAA+TGG - chr3_2:34999290-34999309 Msa0404230:intron 40.0%
AAGAACATGATCAAACCGTC+TGG - chr3_2:34999299-34999318 Msa0404230:intron 40.0%
! AGTGGGCTCTTGAACTAAAA+GGG - chr3_2:34999574-34999593 Msa0404230:CDS 40.0%
! AAGTGGGCTCTTGAACTAAA+AGG - chr3_2:34999575-34999594 Msa0404230:CDS 40.0%
AACTAGGAATGAGAAAGAGC+AGG - chr3_2:34999677-34999696 Msa0404230:five_prime_UTR 40.0%
AACTGAGATGCATCTCCAGA+AGG + chr3_2:34994959-34994978 Msa0404220:CDS 45.0%
GAATGCGTGATTGTAGCGTT+TGG - chr3_2:34994995-34995014 None:intergenic 45.0%
ACAATCACGCATTCGAGGTT+CGG + chr3_2:34995001-34995020 Msa0404220:intron 45.0%
CTTCGAACCACACAAATTGC+AGG - chr3_2:34995052-34995071 None:intergenic 45.0%
CACACAGGTATTCAACTGGA+TGG + chr3_2:34995656-34995675 Msa0404220:intron 45.0%
CATGATCAGCTGGGTTTATG+CGG - chr3_2:34995698-34995717 None:intergenic 45.0%
ACTTCAGAGCATGATCAGCT+GGG - chr3_2:34995707-34995726 None:intergenic 45.0%
AACTTCAGAGCATGATCAGC+TGG - chr3_2:34995708-34995727 None:intergenic 45.0%
!! AGCTGATCATGCTCTGAAGT+TGG + chr3_2:34995707-34995726 Msa0404220:CDS 45.0%
! CGCTAAAAACTGTGGGCTAA+TGG + chr3_2:34995737-34995756 Msa0404220:CDS 45.0%
CTACATAGCCACGTAGAAGT+GGG - chr3_2:34995821-34995840 None:intergenic 45.0%
TACGTGGCTATGTAGGAGAT+AGG + chr3_2:34995826-34995845 Msa0404220:CDS 45.0%
ACGTGGCTATGTAGGAGATA+GGG + chr3_2:34995827-34995846 Msa0404220:CDS 45.0%
CATGAACGTCTCAGCTTTAC+TGG - chr3_2:34995856-34995875 None:intergenic 45.0%
CAGTAAAGCTGAGACGTTCA+TGG + chr3_2:34995854-34995873 Msa0404220:CDS 45.0%
CATGGAGAAGCTCTATGAAC+TGG + chr3_2:34995872-34995891 Msa0404220:CDS 45.0%
TGGAGAAGCTCTATGAACTG+GGG + chr3_2:34995874-34995893 Msa0404220:CDS 45.0%
TACCTTTCGGTACTCACATG+TGG - chr3_2:34995949-34995968 None:intergenic 45.0%
!! GGATAACTAGGGGTACCTTT+CGG - chr3_2:34995962-34995981 None:intergenic 45.0%
CATCACAAGCACTCATCCAA+AGG - chr3_2:34996031-34996050 None:intergenic 45.0%
TTGGATGAGTGCTTGTGATG+AGG + chr3_2:34996031-34996050 Msa0404220:CDS 45.0%
TGGATGAGTGCTTGTGATGA+GGG + chr3_2:34996032-34996051 Msa0404220:CDS 45.0%
!! GCCTCTTTGAAGCAAAAGGA+GGG + chr3_2:34996266-34996285 Msa0404220:CDS 45.0%
! TCCCTCCTTTTGCTTCAAAG+AGG - chr3_2:34996270-34996289 None:intergenic 45.0%
! CTAACAAGCTTGGTGAAGCT+TGG + chr3_2:34996359-34996378 Msa0404220:CDS 45.0%
! AACAAGCTTGGTGAAGCTTG+GGG + chr3_2:34996361-34996380 Msa0404220:CDS 45.0%
! TTAGGAGCATATGTGCGGAA+TGG + chr3_2:34996464-34996483 Msa0404220:CDS 45.0%
CATCTCCACACATTGCAGAA+GGG + chr3_2:34996512-34996531 Msa0404220:CDS 45.0%
CTGTCCAAACTACAAGACGT+GGG + chr3_2:34996538-34996557 Msa0404220:CDS 45.0%
TGTTGAAAGACTGCCATTGG+AGG + chr3_2:34996636-34996655 Msa0404220:CDS 45.0%
AAGGTGGTTCTTGAGCAGAA+AGG - chr3_2:34996802-34996821 None:intergenic 45.0%
! CCCAGTGAAGCCTTTAAGAA+TGG - chr3_2:34996882-34996901 None:intergenic 45.0%
CTTAAAGGCTTCACTGGGTA+AGG + chr3_2:34996884-34996903 Msa0404220:CDS 45.0%
! GTTCAAGCTGAAGTGTTTGG+AGG + chr3_2:34996992-34997011 Msa0404220:three_prime_UTR 45.0%
CCAGCTGAAAATGGGACAAT+TGG - chr3_2:34997460-34997479 None:intergenic 45.0%
! CCAATTGTCCCATTTTCAGC+TGG + chr3_2:34997457-34997476 Msa0404220:three_prime_UTR 45.0%
! CTTTTCCTCCTTCAGTTGGT+TGG - chr3_2:34997580-34997599 None:intergenic 45.0%
GAAGGAGGAAAAGCTGCAAT+TGG + chr3_2:34997587-34997606 Msa0404220:three_prime_UTR 45.0%
ATACTCTCTACGCTGTCAAG+AGG + chr3_2:34997820-34997839 Msa0404220:intron 45.0%
TACTCTCTACGCTGTCAAGA+GGG + chr3_2:34997821-34997840 Msa0404220:intron 45.0%
GAGCTCAGGTTCGTGTTTAT+AGG + chr3_2:34998464-34998483 Msa0404220:intron 45.0%
AGATGTCAAGACCTTGTGGA+AGG + chr3_2:34998663-34998682 Msa0404220:three_prime_UTR 45.0%
! GGCGTGCATTCTTTGATAAC+AGG + chr3_2:34998718-34998737 Msa0404220:three_prime_UTR 45.0%
CCTGATTGATACAGAGTCCA+TGG - chr3_2:34998782-34998801 Msa0404230:CDS 45.0%
CCATGGACTCTGTATCAATC+AGG + chr3_2:34998779-34998798 Msa0404220:three_prime_UTR 45.0%
GGCTTTGCTGATATTGCTGT+TGG - chr3_2:34998853-34998872 Msa0404230:CDS 45.0%
! TTGAAAGTGGACTTGAGGGA+AGG - chr3_2:34998900-34998919 Msa0404230:CDS 45.0%
TTCCCTCAAGTCCACTTTCA+AGG + chr3_2:34998899-34998918 Msa0404220:three_prime_UTR 45.0%
! GATCCTTGAAAGTGGACTTG+AGG - chr3_2:34998905-34998924 Msa0404230:CDS 45.0%
GGCTAAATTCGCCGATGATA+AGG - chr3_2:34999342-34999361 Msa0404230:CDS 45.0%
TCCACATGATCCCTATGAGA+GGG - chr3_2:34999381-34999400 Msa0404230:CDS 45.0%
TTCCACATGATCCCTATGAG+AGG - chr3_2:34999382-34999401 Msa0404230:CDS 45.0%
TAGGGATCATGTGGAAGAAG+AGG + chr3_2:34999386-34999405 Msa0404220:three_prime_UTR 45.0%
TTACCGTCATGCACAAGAAC+AGG + chr3_2:34999467-34999486 Msa0404220:three_prime_UTR 45.0%
GTACCTGTTCTTGTGCATGA+CGG - chr3_2:34999473-34999492 Msa0404230:CDS 45.0%
GTGGGCTCTTGAACTAAAAG+GGG - chr3_2:34999573-34999592 Msa0404230:CDS 45.0%
ATTTGTCCTGAGGGTCAAGT+GGG - chr3_2:34999591-34999610 Msa0404230:CDS 45.0%
ACTCACGTTACTAGGGTTCT+GGG - chr3_2:34999621-34999640 Msa0404230:CDS 45.0%
GAGACTCACTCACGTTACTA+GGG - chr3_2:34999628-34999647 Msa0404230:CDS 45.0%
! TCTGCCGTGAAGTGCTTCAT+CGG + chr3_2:34994648-34994667 Msa0404220:five_prime_UTR 50.0%
! TGGTTCGCCATCTGAAGCTA+CGG - chr3_2:34994679-34994698 None:intergenic 50.0%
GGCAATGGAGTTTGCGTTGA+AGG - chr3_2:34994892-34994911 None:intergenic 50.0%
ACGCTACAATCACGCATTCG+AGG + chr3_2:34994996-34995015 Msa0404220:CDS 50.0%
ATGCGTATACCTGACTCAGC+TGG + chr3_2:34995777-34995796 Msa0404220:CDS 50.0%
GCTTTCTTTCCAGCTGAGTC+AGG - chr3_2:34995789-34995808 None:intergenic 50.0%
ACGTAGAAGTGGGAGATAGG+CGG - chr3_2:34995811-34995830 None:intergenic 50.0%
CCTACATAGCCACGTAGAAG+TGG - chr3_2:34995822-34995841 None:intergenic 50.0%
CCACTTCTACGTGGCTATGT+AGG + chr3_2:34995819-34995838 Msa0404220:CDS 50.0%
!! TGCCACATGTGAGTACCGAA+AGG + chr3_2:34995944-34995963 Msa0404220:CDS 50.0%
TGTGATGAGGGAGAGCGATA+TGG + chr3_2:34996044-34996063 Msa0404220:CDS 50.0%
GTGATGAGGGAGAGCGATAT+GGG + chr3_2:34996045-34996064 Msa0404220:CDS 50.0%
TGATGAGGGAGAGCGATATG+GGG + chr3_2:34996046-34996065 Msa0404220:CDS 50.0%
!! CGCCTCTTTGAAGCAAAAGG+AGG + chr3_2:34996265-34996284 Msa0404220:CDS 50.0%
AGCAAAAGGAGGGAGTCTTG+CGG + chr3_2:34996276-34996295 Msa0404220:CDS 50.0%
TCTTCCACCAACTGCCTTAC+TGG - chr3_2:34996312-34996331 None:intergenic 50.0%
GCATCTCCACACATTGCAGA+AGG + chr3_2:34996511-34996530 Msa0404220:CDS 50.0%
GCTGTCCAAACTACAAGACG+TGG + chr3_2:34996537-34996556 Msa0404220:CDS 50.0%
GATGGTCACCAACCAACTGA+AGG + chr3_2:34997569-34997588 Msa0404220:three_prime_UTR 50.0%
! GCAGCTTTTCCTCCTTCAGT+TGG - chr3_2:34997584-34997603 None:intergenic 50.0%
CGGCAACCTGGCAATCTAAA+TGG - chr3_2:34997786-34997805 None:intergenic 50.0%
AGTCATCTAACACGGCAACC+TGG - chr3_2:34997798-34997817 None:intergenic 50.0%
! CTCTTCAGCCTTATCCAAGG+AGG + chr3_2:34998167-34998186 Msa0404220:intron 50.0%
GGATGTAGCCTCCTTGGATA+AGG - chr3_2:34998178-34998197 None:intergenic 50.0%
GGATAAGGATGTAGCCTCCT+TGG - chr3_2:34998184-34998203 None:intergenic 50.0%
TTTAGCCCAAAATCGCGCCT+TGG + chr3_2:34999355-34999374 Msa0404220:three_prime_UTR 50.0%
CATTTGTCCTGAGGGTCAAG+TGG - chr3_2:34999592-34999611 Msa0404230:CDS 50.0%
CACTTGACCCTCAGGACAAA+TGG + chr3_2:34999590-34999609 Msa0404220:three_prime_UTR 50.0%
GGGTAGTCCATTTGTCCTGA+GGG - chr3_2:34999600-34999619 Msa0404230:CDS 50.0%
CTCACGTTACTAGGGTTCTG+GGG - chr3_2:34999620-34999639 Msa0404230:CDS 50.0%
CACTCACGTTACTAGGGTTC+TGG - chr3_2:34999622-34999641 Msa0404230:CDS 50.0%
GGAGACTCACTCACGTTACT+AGG - chr3_2:34999629-34999648 Msa0404230:CDS 50.0%
! GTCGCCGATGAAGCACTTCA+CGG - chr3_2:34994655-34994674 None:intergenic 55.0%
GTATCACGGCGGTGAGAGAT+TGG - chr3_2:34994699-34994718 None:intergenic 55.0%
CGTGTCGTACCGTCGTATCA+CGG - chr3_2:34994713-34994732 None:intergenic 55.0%
GCCTATCTCCCACTTCTACG+TGG + chr3_2:34995810-34995829 Msa0404220:CDS 55.0%
GCCACGTAGAAGTGGGAGAT+AGG - chr3_2:34995814-34995833 None:intergenic 55.0%
GCTCTATGAACTGGGGCTAG+TGG + chr3_2:34995881-34995900 Msa0404220:CDS 55.0%
TGGGAAGCCAGTAAGGCAGT+TGG + chr3_2:34996302-34996321 Msa0404220:CDS 55.0%
GAAGCCAGTAAGGCAGTTGG+TGG + chr3_2:34996305-34996324 Msa0404220:CDS 55.0%
CTCCACACATTGCAGAAGGG+TGG + chr3_2:34996515-34996534 Msa0404220:CDS 55.0%
AGCCACCCTTCTGCAATGTG+TGG - chr3_2:34996520-34996539 None:intergenic 55.0%
TTCTTTGTGGCGGCCTCCAA+TGG - chr3_2:34996652-34996671 None:intergenic 55.0%
GGTCACCAACCAACTGAAGG+AGG + chr3_2:34997572-34997591 Msa0404220:three_prime_UTR 55.0%
CTCTACGCTGTCAAGAGGGT+AGG + chr3_2:34997825-34997844 Msa0404220:intron 55.0%
!! CTTGAGGGAAGGCGCTACTT+TGG - chr3_2:34998889-34998908 Msa0404230:CDS 55.0%
TGATCCCTATGAGAGGGCCA+AGG - chr3_2:34999375-34999394 Msa0404230:CDS 55.0%
GCCCTCTCATAGGGATCATG+TGG + chr3_2:34999377-34999396 Msa0404220:three_prime_UTR 55.0%
GGGGTAGTCCATTTGTCCTG+AGG - chr3_2:34999601-34999620 Msa0404230:CDS 55.0%
CTCTCACCGCCGTGATACGA+CGG + chr3_2:34994701-34994720 Msa0404220:CDS 60.0%
GTCGTACCGTCGTATCACGG+CGG - chr3_2:34994710-34994729 None:intergenic 60.0%
GCGATATGGGGTTGCAGCAG+TGG + chr3_2:34996058-34996077 Msa0404220:CDS 60.0%
GCACAGCAAGGCCTTCCACA+AGG - chr3_2:34998677-34998696 Msa0404230:CDS 60.0%
!! GAGGGAAGGCGCTACTTTGG+AGG - chr3_2:34998886-34998905 Msa0404230:CDS 60.0%
! GAGGGCCAAGGCGCGATTTT+GGG - chr3_2:34999363-34999382 Msa0404230:CDS 60.0%
! AGAGGGCCAAGGCGCGATTT+TGG - chr3_2:34999364-34999383 Msa0404230:CDS 60.0%
CAAGAGCCCACTTGACCCTC+AGG + chr3_2:34999582-34999601 Msa0404220:three_prime_UTR 60.0%
GGCGACGCCGTAGCTTCAGA+TGG + chr3_2:34994669-34994688 Msa0404220:exon 65.0%
AGGAGGGAGTCTTGCGGCTG+TGG + chr3_2:34996282-34996301 Msa0404220:CDS 65.0%
GGAGGGAGTCTTGCGGCTGT+GGG + chr3_2:34996283-34996302 Msa0404220:CDS 65.0%
GCGGCTGTGGGAAGCCAGTA+AGG + chr3_2:34996295-34996314 Msa0404220:CDS 65.0%
TCGCGCCTTGGCCCTCTCAT+AGG + chr3_2:34999367-34999386 Msa0404220:three_prime_UTR 65.0%
CGCGCCTTGGCCCTCTCATA+GGG + chr3_2:34999368-34999387 Msa0404220:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 34994561 34999710 34994561 ID=Msa0404220;Name=Msa0404220
chr3_2 mRNA 34994561 34999710 34994561 ID=Msa0404220-mRNA-1;Parent=Msa0404220;Name=Msa0404220-mRNA-1;_AED=0.07;_eAED=0.07;_QI=127|1|1|1|0.25|0.2|5|1041|523
chr3_2 exon 34994561 34995017 34994561 ID=Msa0404220-mRNA-1:exon:7162;Parent=Msa0404220-mRNA-1
chr3_2 exon 34995663 34997050 34995663 ID=Msa0404220-mRNA-1:exon:7163;Parent=Msa0404220-mRNA-1
chr3_2 exon 34997457 34997608 34997457 ID=Msa0404220-mRNA-1:exon:7164;Parent=Msa0404220-mRNA-1
chr3_2 exon 34998636 34999007 34998636 ID=Msa0404220-mRNA-1:exon:7165;Parent=Msa0404220-mRNA-1
chr3_2 exon 34999340 34999710 34999340 ID=Msa0404220-mRNA-1:exon:7166;Parent=Msa0404220-mRNA-1
chr3_2 five_prime_UTR 34994561 34994687 34994561 ID=Msa0404220-mRNA-1:five_prime_utr;Parent=Msa0404220-mRNA-1
chr3_2 CDS 34994688 34995017 34994688 ID=Msa0404220-mRNA-1:cds;Parent=Msa0404220-mRNA-1
chr3_2 CDS 34995663 34996904 34995663 ID=Msa0404220-mRNA-1:cds;Parent=Msa0404220-mRNA-1
chr3_2 three_prime_UTR 34996905 34997050 34996905 ID=Msa0404220-mRNA-1:three_prime_utr;Parent=Msa0404220-mRNA-1
chr3_2 three_prime_UTR 34997457 34997608 34997457 ID=Msa0404220-mRNA-1:three_prime_utr;Parent=Msa0404220-mRNA-1
chr3_2 three_prime_UTR 34998636 34999007 34998636 ID=Msa0404220-mRNA-1:three_prime_utr;Parent=Msa0404220-mRNA-1
chr3_2 three_prime_UTR 34999340 34999710 34999340 ID=Msa0404220-mRNA-1:three_prime_utr;Parent=Msa0404220-mRNA-1
Gene Sequence

>Msa0404220

ATGGCGAACCAATCTCTCACCGCCGTGATACGACGGTACGACACGCTGAATCTTTCTCTTACTAATTCCCCATATACTTCTTCTCTTCGCAGCAGCATCAGTTTCTTTTTGGGCGCACGAACTCTCTACACACACGCAGATTCTCGCACTTCTACATTTTCAGATAAACAGAATCTGAAGAGCTTAATTGCGCGATTCAAACCTTCAACGCAAACTCCATTGCCAGTGCTTCAAAATTGGATCGATCAAGGTAACAAGCTTTCATCATCGGAACTGAGATGCATCTCCAGAAGGCTCATCAAATCCAAACGCTACAATCACGCATTCGAGGTATTCAACTGGATGGAAAACCAACAAAAATTCCGCATAAACCCAGCTGATCATGCTCTGAAGTTGGAGTTAATCGCTAAAAACTGTGGGCTAATGGAAGCTGAAGAATATTTTATGCGTATACCTGACTCAGCTGGAAAGAAAGCCGCCTATCTCCCACTTCTACGTGGCTATGTAGGAGATAGGGACACCAGTAAAGCTGAGACGTTCATGGAGAAGCTCTATGAACTGGGGCTAGTGGTAAACGCTCACCCTTATAATGAAATGATGAAACTATATCTTGCCACATGTGAGTACCGAAAGGTACCCCTAGTTATCCAACAAATAAAACGAAATAAAGTACCCTTGAATGTTCTGTCTTACAACCTTTGGATGAGTGCTTGTGATGAGGGAGAGCGATATGGGGTTGCAGCAGTGGAAACAGTTTTTAGAGAAATGCAAAATGATGAGAATGTTGAAATGGGATGGAGCAGTCTTGCTACTTTAGCCAATGTGTATATGAAAGCAGGACAATATGAGAAAGCCATTCTAGTTCTAAAAAATGCCGAAGAGAAACTGTCTACATGTAATCGTCTTGGTTACTTCTTCATCATAACACTATACGCCTCTTTGAAGCAAAAGGAGGGAGTCTTGCGGCTGTGGGAAGCCAGTAAGGCAGTTGGTGGAAGAATCAGTTGTGCCAACTATATTTGCATACTAACAAGCTTGGTGAAGCTTGGGGACATAGCACAAGCCAGAAGAATCTTCAGAGAATGGGAATCTAATTGTCAAAAATATGATATCAGAGTCTCTAATGTTCTTTTAGGAGCATATGTGCGGAATGGATTAATAGAAGAAGCTGAATCATTGCATCTCCACACATTGCAGAAGGGTGGCTGTCCAAACTACAAGACGTGGGAAATTCTCATTGAAGGATATGTCAATTGGCAAAAGATGGATGAGGCTATTATTGCCATGAAAAGAGCTTTGGCTATGTTGAAAGACTGCCATTGGAGGCCGCCACAAAGAATTGTATTAGCCATAGCTGAATATTTGGAGAAATGTGGGAATTTTGAATATGCAAATGAGTACATCACAGATATTCATAATTTAGGTCTTGGAAGTTTATCATTGTATAAAATATTGCTTAGAATGCACCTTTCTGCTCAAGAACCACCTTTCCATGTCCTTAAAATGATCAATAAAGACAAAATGGAGATGGATAGTGAGACTGTTTCCATTCTTAAAGGCTTCACTGGGTAA

Protein sequence

>Msa0404220

MANQSLTAVIRRYDTLNLSLTNSPYTSSLRSSISFFLGARTLYTHADSRTSTFSDKQNLKSLIARFKPSTQTPLPVLQNWIDQGNKLSSSELRCISRRLIKSKRYNHAFEVFNWMENQQKFRINPADHALKLELIAKNCGLMEAEEYFMRIPDSAGKKAAYLPLLRGYVGDRDTSKAETFMEKLYELGLVVNAHPYNEMMKLYLATCEYRKVPLVIQQIKRNKVPLNVLSYNLWMSACDEGERYGVAAVETVFREMQNDENVEMGWSSLATLANVYMKAGQYEKAILVLKNAEEKLSTCNRLGYFFIITLYASLKQKEGVLRLWEASKAVGGRISCANYICILTSLVKLGDIAQARRIFREWESNCQKYDIRVSNVLLGAYVRNGLIEEAESLHLHTLQKGGCPNYKTWEILIEGYVNWQKMDEAIIAMKRALAMLKDCHWRPPQRIVLAIAEYLEKCGNFEYANEYITDIHNLGLGSLSLYKILLRMHLSAQEPPFHVLKMINKDKMEMDSETVSILKGFTG*