Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404220 | XP_013461683.2 | 94.118 | 527 | 27 | 1 | 1 | 523 | 1 | 527 | 0.0 | 1013 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404220 | sp|Q3E911|PP400_ARATH | 54.105 | 475 | 210 | 4 | 39 | 508 | 20 | 491 | 1.52e-177 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404220 | A0A072V2Y1 | 94.118 | 527 | 27 | 1 | 1 | 523 | 1 | 527 | 0.0 | 1013 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003560 | Msa0404220 | 0.821729 | 3.458566e-53 | -8.615850e-47 |
| Msa0006700 | Msa0404220 | 0.852449 | 4.582709e-61 | -8.615850e-47 |
| Msa0030030 | Msa0404220 | 0.819438 | 1.161257e-52 | -8.615850e-47 |
| Msa0050730 | Msa0404220 | 0.803331 | 3.669389e-49 | -8.615850e-47 |
| Msa0055280 | Msa0404220 | 0.855029 | 8.297595e-62 | -8.615850e-47 |
| Msa0071550 | Msa0404220 | 0.816361 | 5.753515e-52 | -8.615850e-47 |
| Msa0077330 | Msa0404220 | 0.804245 | 2.369281e-49 | -8.615850e-47 |
| Msa0096020 | Msa0404220 | 0.826325 | 2.885667e-54 | -8.615850e-47 |
| Msa0101060 | Msa0404220 | 0.856633 | 2.819848e-62 | -8.615850e-47 |
| Msa0153430 | Msa0404220 | 0.812970 | 3.242651e-51 | -8.615850e-47 |
| Msa0153440 | Msa0404220 | 0.817910 | 2.580590e-52 | -8.615850e-47 |
| Msa0169960 | Msa0404220 | 0.819476 | 1.138197e-52 | -8.615850e-47 |
| Msa0198440 | Msa0404220 | 0.807789 | 4.257047e-50 | -8.615850e-47 |
| Msa0203180 | Msa0404220 | 0.800853 | 1.185750e-48 | -8.615850e-47 |
| Msa0213090 | Msa0404220 | 0.811902 | 5.549801e-51 | -8.615850e-47 |
| Msa0223100 | Msa0404220 | 0.847822 | 9.067319e-60 | -8.615850e-47 |
| Msa0223290 | Msa0404220 | 0.848686 | 5.231454e-60 | -8.615850e-47 |
| Msa0223380 | Msa0404220 | 0.844887 | 5.724105e-59 | -8.615850e-47 |
| Msa0232860 | Msa0404220 | 0.836709 | 7.982533e-57 | -8.615850e-47 |
| Msa0370870 | Msa0404220 | 0.807974 | 3.888084e-50 | -8.615850e-47 |
| Msa0377530 | Msa0404220 | 0.815121 | 1.087547e-51 | -8.615850e-47 |
| Msa0379540 | Msa0404220 | 0.966943 | 1.335125e-126 | -8.615850e-47 |
| Msa0379550 | Msa0404220 | 0.816629 | 5.011995e-52 | -8.615850e-47 |
| Msa0389050 | Msa0404220 | 0.826560 | 2.537154e-54 | -8.615850e-47 |
| Msa0389810 | Msa0404220 | 0.801189 | 1.012706e-48 | -8.615850e-47 |
| Msa0404220 | Msa0404230 | 0.862149 | 6.215986e-64 | -8.615850e-47 |
| Msa0404220 | Msa0404700 | 0.809295 | 2.030714e-50 | -8.615850e-47 |
| Msa0404220 | Msa0411000 | 0.811856 | 5.680023e-51 | -8.615850e-47 |
| Msa0404220 | Msa0412760 | 0.814349 | 1.612232e-51 | -8.615850e-47 |
| Msa0404220 | Msa0419050 | 0.806842 | 6.759870e-50 | -8.615850e-47 |
| Msa0404220 | Msa0419620 | -0.821493 | 3.920377e-53 | -8.615850e-47 |
| Msa0404220 | Msa0426810 | 0.805405 | 1.356257e-49 | -8.615850e-47 |
| Msa0404220 | Msa0431520 | 0.815598 | 8.518744e-52 | -8.615850e-47 |
| Msa0404220 | Msa0431830 | 0.840873 | 6.689187e-58 | -8.615850e-47 |
| Msa0404220 | Msa0464420 | 0.811467 | 6.899738e-51 | -8.615850e-47 |
| Msa0404220 | Msa0464900 | 0.805625 | 1.219307e-49 | -8.615850e-47 |
| Msa0404220 | Msa0468130 | 0.806097 | 9.704945e-50 | -8.615850e-47 |
| Msa0404220 | Msa0473240 | 0.809596 | 1.750200e-50 | -8.615850e-47 |
| Msa0404220 | Msa0475400 | 0.955508 | 2.578217e-113 | -8.615850e-47 |
| Msa0404220 | Msa0475410 | 0.825355 | 4.905325e-54 | -8.615850e-47 |
| Msa0404220 | Msa0491500 | 0.801018 | 1.097600e-48 | -8.615850e-47 |
| Msa0404220 | Msa0502910 | 0.814667 | 1.370672e-51 | -8.615850e-47 |
| Msa0404220 | Msa0504410 | 0.823516 | 1.328076e-53 | -8.615850e-47 |
| Msa0404220 | Msa0510040 | 0.815343 | 9.704314e-52 | -8.615850e-47 |
| Msa0404220 | Msa0510560 | 0.809838 | 1.552127e-50 | -8.615850e-47 |
| Msa0404220 | Msa0517490 | 0.803996 | 2.669917e-49 | -8.615850e-47 |
| Msa0404220 | Msa0530380 | 0.844914 | 5.626796e-59 | -8.615850e-47 |
| Msa0404220 | Msa0533460 | 0.808417 | 3.129184e-50 | -8.615850e-47 |
| Msa0404220 | Msa0549740 | 0.822801 | 1.950610e-53 | -8.615850e-47 |
| Msa0404220 | Msa0576600 | 0.800114 | 1.677724e-48 | -8.615850e-47 |
| Msa0404220 | Msa0579340 | 0.830238 | 3.286365e-55 | -8.615850e-47 |
| Msa0404220 | Msa0580540 | 0.822365 | 2.462508e-53 | -8.615850e-47 |
| Msa0404220 | Msa0581920 | 0.802275 | 6.062284e-49 | -8.615850e-47 |
| Msa0404220 | Msa0617830 | 0.812766 | 3.593586e-51 | -8.615850e-47 |
| Msa0404220 | Msa0620640 | 0.863385 | 2.585877e-64 | -8.615850e-47 |
| Msa0404220 | Msa0620750 | 0.808632 | 2.815657e-50 | -8.615850e-47 |
| Msa0404220 | Msa0621780 | 0.818504 | 1.893579e-52 | -8.615850e-47 |
| Msa0404220 | Msa0622340 | 0.830802 | 2.391862e-55 | -8.615850e-47 |
| Msa0404220 | Msa0626230 | 0.822216 | 2.666817e-53 | -8.615850e-47 |
| Msa0404220 | Msa0627080 | 0.812913 | 3.337752e-51 | -8.615850e-47 |
| Msa0404220 | Msa0630060 | 0.803148 | 4.002942e-49 | -8.615850e-47 |
| Msa0404220 | Msa0639030 | 0.807614 | 4.637555e-50 | -8.615850e-47 |
| Msa0404220 | Msa0646390 | 0.822248 | 2.622334e-53 | -8.615850e-47 |
| Msa0404220 | Msa0650650 | 0.815677 | 8.177325e-52 | -8.615850e-47 |
| Msa0404220 | Msa0650740 | 0.818320 | 2.084878e-52 | -8.615850e-47 |
| Msa0404220 | Msa0654020 | 0.811454 | 6.945710e-51 | -8.615850e-47 |
| Msa0404220 | Msa0654060 | 0.800989 | 1.112598e-48 | -8.615850e-47 |
| Msa0404220 | Msa0656270 | 0.823755 | 1.167562e-53 | -8.615850e-47 |
| Msa0404220 | Msa0656680 | 0.811265 | 7.635039e-51 | -8.615850e-47 |
| Msa0404220 | Msa0694250 | 0.811468 | 6.896176e-51 | -8.615850e-47 |
| Msa0404220 | Msa0697600 | 0.808632 | 2.815588e-50 | -8.615850e-47 |
| Msa0404220 | Msa0700070 | 0.821169 | 4.657064e-53 | -8.615850e-47 |
| Msa0404220 | Msa0731710 | 0.804272 | 2.339666e-49 | -8.615850e-47 |
| Msa0404220 | Msa0739610 | 0.801720 | 7.880613e-49 | -8.615850e-47 |
| Msa0404220 | Msa0743640 | 0.842910 | 1.937355e-58 | -8.615850e-47 |
| Msa0404220 | Msa0754350 | 0.859006 | 5.571864e-63 | -8.615850e-47 |
| Msa0404220 | Msa0755090 | 0.803494 | 3.393623e-49 | -8.615850e-47 |
| Msa0404220 | Msa0756410 | 0.811221 | 7.803067e-51 | -8.615850e-47 |
| Msa0404220 | Msa0774810 | -0.802895 | 4.515263e-49 | -8.615850e-47 |
| Msa0404220 | Msa0787720 | 0.824011 | 1.016898e-53 | -8.615850e-47 |
| Msa0404220 | Msa0787730 | 0.811179 | 7.967822e-51 | -8.615850e-47 |
| Msa0404220 | Msa0792510 | 0.801773 | 7.685601e-49 | -8.615850e-47 |
| Msa0404220 | Msa0795710 | 0.818238 | 2.175148e-52 | -8.615850e-47 |
| Msa0404220 | Msa0796950 | 0.818382 | 2.017795e-52 | -8.615850e-47 |
| Msa0404220 | Msa0797000 | 0.827219 | 1.765802e-54 | -8.615850e-47 |
| Msa0404220 | Msa0811940 | 0.813970 | 1.954564e-51 | -8.615850e-47 |
| Msa0404220 | Msa0813190 | 0.804643 | 1.957605e-49 | -8.615850e-47 |
| Msa0404220 | Msa0824770 | 0.804390 | 2.210540e-49 | -8.615850e-47 |
| Msa0404220 | Msa0833450 | 0.815871 | 7.404697e-52 | -8.615850e-47 |
| Msa0404220 | Msa0834450 | 0.803493 | 3.396217e-49 | -8.615850e-47 |
| Msa0404220 | Msa0834460 | 0.812451 | 4.211968e-51 | -8.615850e-47 |
| Msa0404220 | Msa0863760 | 0.843548 | 1.309174e-58 | -8.615850e-47 |
| Msa0404220 | Msa0867810 | 0.815608 | 8.471408e-52 | -8.615850e-47 |
| Msa0404220 | Msa0882010 | 0.815767 | 7.808240e-52 | -8.615850e-47 |
| Msa0404220 | Msa0883660 | 0.806987 | 6.297476e-50 | -8.615850e-47 |
| Msa0404220 | Msa0883670 | 0.809415 | 1.914215e-50 | -8.615850e-47 |
| Msa0404220 | Msa0885100 | 0.827204 | 1.779766e-54 | -8.615850e-47 |
| Msa0404220 | Msa0887070 | 0.856573 | 2.936775e-62 | -8.615850e-47 |
| Msa0404220 | Msa0903730 | 0.834717 | 2.550094e-56 | -8.615850e-47 |
| Msa0404220 | Msa0908170 | 0.804163 | 2.464324e-49 | -8.615850e-47 |
| Msa0404220 | Msa0950410 | 0.867360 | 1.449441e-65 | -8.615850e-47 |
| Msa0404220 | Msa0950620 | 0.846493 | 2.098538e-59 | -8.615850e-47 |
| Msa0404220 | Msa0951720 | 0.805626 | 1.219197e-49 | -8.615850e-47 |
| Msa0404220 | Msa0964680 | 0.816452 | 5.489081e-52 | -8.615850e-47 |
| Msa0404220 | Msa0965520 | 0.801090 | 1.060770e-48 | -8.615850e-47 |
| Msa0404220 | Msa0971860 | 0.801609 | 8.305490e-49 | -8.615850e-47 |
| Msa0404220 | Msa0973130 | 0.805187 | 1.506339e-49 | -8.615850e-47 |
| Msa0404220 | Msa0973230 | 0.818638 | 1.765376e-52 | -8.615850e-47 |
| Msa0404220 | Msa0982590 | 0.842324 | 2.772924e-58 | -8.615850e-47 |
| Msa0404220 | Msa1012920 | 0.806069 | 9.838914e-50 | -8.615850e-47 |
| Msa0404220 | Msa1016110 | 0.806780 | 6.964680e-50 | -8.615850e-47 |
| Msa0404220 | Msa1037020 | 0.831345 | 1.759711e-55 | -8.615850e-47 |
| Msa0404220 | Msa1069180 | 0.822870 | 1.879937e-53 | -8.615850e-47 |
| Msa0404220 | Msa1077670 | 0.808050 | 3.746733e-50 | -8.615850e-47 |
| Msa0404220 | Msa1079730 | -0.805744 | 1.151340e-49 | -8.615850e-47 |
| Msa0404220 | Msa1120620 | 0.827768 | 1.303436e-54 | -8.615850e-47 |
| Msa0404220 | Msa1157020 | 0.833405 | 5.433829e-56 | -8.615850e-47 |
| Msa0404220 | Msa1159360 | 0.800781 | 1.226833e-48 | -8.615850e-47 |
| Msa0404220 | Msa1164530 | 0.833078 | 6.556706e-56 | -8.615850e-47 |
| Msa0404220 | Msa1168040 | -0.813991 | 1.933989e-51 | -8.615850e-47 |
| Msa0404220 | Msa1177620 | 0.821253 | 4.455668e-53 | -8.615850e-47 |
| Msa0404220 | Msa1182830 | 0.826911 | 2.091804e-54 | -8.615850e-47 |
| Msa0404220 | Msa1188820 | 0.819131 | 1.364476e-52 | -8.615850e-47 |
| Msa0404220 | Msa1207460 | -0.803661 | 3.134262e-49 | -8.615850e-47 |
| Msa0404220 | Msa1209790 | 0.800493 | 1.404724e-48 | -8.615850e-47 |
| Msa0404220 | Msa1211390 | 0.820961 | 5.200548e-53 | -8.615850e-47 |
| Msa0404220 | Msa1218650 | 0.832817 | 7.612024e-56 | -8.615850e-47 |
| Msa0404220 | Msa1221200 | -0.807178 | 5.737323e-50 | -8.615850e-47 |
| Msa0404220 | Msa1225820 | 0.809251 | 2.075195e-50 | -8.615850e-47 |
| Msa0404220 | Msa1237260 | 0.814931 | 1.198015e-51 | -8.615850e-47 |
| Msa0404220 | Msa1243130 | 0.818803 | 1.619762e-52 | -8.615850e-47 |
| Msa0404220 | Msa1272480 | 0.801577 | 8.433660e-49 | -8.615850e-47 |
| Msa0404220 | Msa1272960 | 0.834978 | 2.191667e-56 | -8.615850e-47 |
| Msa0404220 | Msa1282210 | 0.820924 | 5.304372e-53 | -8.615850e-47 |
| Msa0404220 | Msa1306700 | 0.831953 | 1.245944e-55 | -8.615850e-47 |
| Msa0404220 | Msa1307740 | 0.805710 | 1.170297e-49 | -8.615850e-47 |
| Msa0404220 | Msa1317710 | 0.849762 | 2.626483e-60 | -8.615850e-47 |
| Msa0404220 | Msa1343340 | 0.815221 | 1.033108e-51 | -8.615850e-47 |
| Msa0404220 | Msa1356180 | 0.811501 | 6.782826e-51 | -8.615850e-47 |
| Msa0404220 | Msa1358870 | -0.822750 | 2.004006e-53 | -8.615850e-47 |
| Msa0404220 | Msa1368980 | 0.823192 | 1.580717e-53 | -8.615850e-47 |
| Msa0404220 | Msa1403950 | 0.828401 | 9.178227e-55 | -8.615850e-47 |
| Msa0404220 | Msa1405400 | 0.803312 | 3.702159e-49 | -8.615850e-47 |
| Msa0404220 | Msa1405470 | 0.837059 | 6.499116e-57 | -8.615850e-47 |
| Msa0404220 | Msa1419110 | 0.838277 | 3.164274e-57 | -8.615850e-47 |
| Msa0404220 | Msa1426750 | 0.806897 | 6.579648e-50 | -8.615850e-47 |
| Msa0404220 | Msa1439230 | 0.836235 | 1.053673e-56 | -8.615850e-47 |
| Msa0404220 | Msa1450020 | 0.806197 | 9.246052e-50 | -8.615850e-47 |
| Msa0404220 | Msa1460310 | -0.819561 | 1.088523e-52 | -8.615850e-47 |
| Msa0253370 | Msa0404220 | 0.831545 | 1.570938e-55 | -8.615850e-47 |
| Msa0264940 | Msa0404220 | -0.817687 | 2.897374e-52 | -8.615850e-47 |
| Msa0278670 | Msa0404220 | 0.810984 | 8.780545e-51 | -8.615850e-47 |
| Msa0281940 | Msa0404220 | 0.831851 | 1.320353e-55 | -8.615850e-47 |
| Msa0282170 | Msa0404220 | 0.808967 | 2.386716e-50 | -8.615850e-47 |
| Msa0284870 | Msa0404220 | 0.809010 | 2.337700e-50 | -8.615850e-47 |
| Msa0288320 | Msa0404220 | 0.816126 | 6.495158e-52 | -8.615850e-47 |
| Msa0292180 | Msa0404220 | 0.845649 | 3.560698e-59 | -8.615850e-47 |
| Msa0302650 | Msa0404220 | 0.829243 | 5.741713e-55 | -8.615850e-47 |
| Msa0302990 | Msa0404220 | -0.819697 | 1.013414e-52 | -8.615850e-47 |
| Msa0318070 | Msa0404220 | 0.816818 | 4.544661e-52 | -8.615850e-47 |
| Msa0323630 | Msa0404220 | 0.801968 | 7.009987e-49 | -8.615850e-47 |
| Msa0329550 | Msa0404220 | 0.815525 | 8.843045e-52 | -8.615850e-47 |
| Msa0330400 | Msa0404220 | 0.825643 | 4.192094e-54 | -8.615850e-47 |
| Msa0339870 | Msa0404220 | 0.810002 | 1.431110e-50 | -8.615850e-47 |
| Msa0343590 | Msa0404220 | 0.824406 | 8.211506e-54 | -8.615850e-47 |
| Msa0349050 | Msa0404220 | 0.834651 | 2.650218e-56 | -8.615850e-47 |
| Msa0351230 | Msa0404220 | 0.802336 | 5.887177e-49 | -8.615850e-47 |
| Msa0362060 | Msa0404220 | 0.805157 | 1.528663e-49 | -8.615850e-47 |
| Msa0362430 | Msa0404220 | 0.811321 | 7.423529e-51 | -8.615850e-47 |
| Msa0363100 | Msa0404220 | 0.840869 | 6.706285e-58 | -8.615850e-47 |
| Msa0363170 | Msa0404220 | 0.831887 | 1.293992e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404220 | MtrunA17_Chr3g0132571 | 92.925 | 523 | 17 | 1 | 1 | 523 | 1 | 503 | 0.0 | 1000 |
| Msa0404220 | MtrunA17_Chr8g0359961 | 31.749 | 463 | 312 | 3 | 50 | 511 | 26 | 485 | 7.90e-76 | 248 |
| Msa0404220 | MtrunA17_Chr1g0185601 | 31.337 | 501 | 328 | 8 | 28 | 518 | 2 | 496 | 1.32e-75 | 247 |
| Msa0404220 | MtrunA17_Chr2g0282091 | 28.041 | 485 | 341 | 4 | 40 | 519 | 7 | 488 | 2.04e-60 | 207 |
| Msa0404220 | MtrunA17_Chr4g0021331 | 29.120 | 443 | 290 | 9 | 75 | 506 | 45 | 474 | 3.13e-59 | 203 |
| Msa0404220 | MtrunA17_Chr8g0368151 | 29.695 | 394 | 272 | 3 | 77 | 468 | 43 | 433 | 1.09e-57 | 199 |
| Msa0404220 | MtrunA17_Chr1g0155351 | 29.353 | 402 | 275 | 5 | 6 | 405 | 8 | 402 | 3.07e-56 | 193 |
| Msa0404220 | MtrunA17_Chr2g0303221 | 28.474 | 439 | 294 | 9 | 39 | 466 | 8 | 437 | 3.30e-56 | 195 |
| Msa0404220 | MtrunA17_Chr2g0324251 | 29.691 | 421 | 283 | 5 | 74 | 486 | 49 | 464 | 3.43e-52 | 184 |
| Msa0404220 | MtrunA17_Chr1g0194521 | 28.846 | 416 | 281 | 7 | 56 | 466 | 89 | 494 | 9.84e-52 | 184 |
| Msa0404220 | MtrunA17_Chr8g0335951 | 25.676 | 296 | 192 | 4 | 244 | 518 | 160 | 448 | 3.21e-31 | 125 |
| Msa0404220 | MtrunA17_Chr8g0349421 | 27.426 | 237 | 168 | 1 | 282 | 518 | 4 | 236 | 5.36e-28 | 112 |
| Msa0404220 | MtrunA17_Chr7g0256181 | 23.758 | 463 | 324 | 10 | 54 | 508 | 156 | 597 | 5.16e-27 | 115 |
| Msa0404220 | MtrunA17_Chr1g0171501 | 24.318 | 440 | 309 | 11 | 76 | 508 | 158 | 580 | 7.83e-25 | 108 |
| Msa0404220 | MtrunA17_Chr2g0328121 | 20.682 | 469 | 362 | 6 | 57 | 519 | 41 | 505 | 1.80e-20 | 94.7 |
| Msa0404220 | MtrunA17_Chr8g0349431 | 34.259 | 108 | 70 | 1 | 76 | 182 | 12 | 119 | 1.79e-15 | 73.2 |
| Msa0404220 | MtrunA17_Chr8g0359551 | 24.176 | 273 | 202 | 3 | 160 | 431 | 214 | 482 | 3.91e-13 | 72.0 |
| Msa0404220 | MtrunA17_Chr1g0170071 | 23.891 | 293 | 198 | 6 | 65 | 355 | 578 | 847 | 1.94e-12 | 70.1 |
| Msa0404220 | MtrunA17_Chr6g0481621 | 21.930 | 342 | 250 | 9 | 95 | 430 | 231 | 561 | 5.51e-11 | 65.1 |
| Msa0404220 | MtrunA17_Chr1g0168811 | 21.186 | 354 | 236 | 7 | 112 | 426 | 203 | 552 | 5.76e-11 | 65.1 |
| Msa0404220 | MtrunA17_Chr8g0353181 | 22.393 | 326 | 241 | 5 | 164 | 487 | 171 | 486 | 7.02e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404220 | AT5G27460.1 | 54.105 | 475 | 210 | 4 | 39 | 508 | 20 | 491 | 1.54e-178 | 511 |
| Msa0404220 | AT1G02150.1 | 34.375 | 384 | 246 | 3 | 76 | 458 | 86 | 464 | 1.07e-79 | 259 |
| Msa0404220 | AT4G02820.1 | 30.802 | 474 | 322 | 4 | 46 | 519 | 50 | 517 | 3.59e-77 | 252 |
| Msa0404220 | AT4G21705.1 | 28.862 | 492 | 339 | 4 | 29 | 518 | 4 | 486 | 8.72e-69 | 229 |
| Msa0404220 | AT1G02370.1 | 28.889 | 450 | 308 | 5 | 76 | 519 | 90 | 533 | 1.53e-65 | 222 |
| Msa0404220 | AT2G20710.1 | 30.465 | 430 | 294 | 4 | 34 | 462 | 15 | 440 | 4.29e-64 | 217 |
| Msa0404220 | AT1G60770.1 | 31.738 | 397 | 264 | 4 | 126 | 518 | 91 | 484 | 8.12e-61 | 208 |
| Msa0404220 | AT4G01990.1 | 27.640 | 445 | 314 | 4 | 76 | 518 | 59 | 497 | 1.11e-56 | 197 |
| Msa0404220 | AT5G09450.1 | 31.395 | 344 | 231 | 4 | 55 | 395 | 53 | 394 | 4.59e-56 | 193 |
| Msa0404220 | AT2G20710.2 | 30.946 | 349 | 236 | 4 | 115 | 462 | 1 | 345 | 4.17e-48 | 171 |
| Msa0404220 | AT1G28020.1 | 30.675 | 326 | 214 | 4 | 74 | 393 | 53 | 372 | 5.79e-43 | 160 |
| Msa0404220 | AT1G80270.1 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.30e-28 | 119 |
| Msa0404220 | AT1G80270.3 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.30e-28 | 119 |
| Msa0404220 | AT1G80270.2 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.30e-28 | 119 |
| Msa0404220 | AT1G80270.5 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.30e-28 | 119 |
| Msa0404220 | AT1G80270.4 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.30e-28 | 119 |
| Msa0404220 | AT1G15480.1 | 21.918 | 438 | 323 | 9 | 76 | 508 | 145 | 568 | 1.60e-24 | 107 |
| Msa0404220 | AT3G11380.1 | 27.653 | 311 | 186 | 8 | 92 | 398 | 78 | 353 | 1.67e-20 | 95.1 |
| Msa0404220 | AT3G11380.1 | 32.044 | 181 | 114 | 4 | 72 | 243 | 360 | 540 | 6.53e-15 | 77.8 |
| Msa0404220 | AT3G15590.1 | 22.685 | 432 | 323 | 6 | 76 | 506 | 160 | 581 | 3.47e-20 | 94.7 |
| Msa0404220 | AT3G15590.2 | 22.685 | 432 | 323 | 6 | 76 | 506 | 160 | 581 | 3.47e-20 | 94.7 |
| Msa0404220 | AT1G28000.1 | 26.457 | 223 | 157 | 4 | 75 | 293 | 51 | 270 | 1.27e-18 | 88.2 |
| Msa0404220 | AT1G07590.1 | 21.711 | 456 | 349 | 6 | 68 | 519 | 76 | 527 | 8.73e-18 | 86.7 |
| Msa0404220 | AT1G43010.1 | 28.638 | 213 | 142 | 3 | 74 | 285 | 53 | 256 | 2.17e-17 | 82.4 |
| Msa0404220 | AT2G31400.2 | 25.000 | 268 | 197 | 3 | 160 | 426 | 270 | 534 | 1.91e-14 | 77.0 |
| Msa0404220 | AT2G31400.1 | 25.000 | 268 | 197 | 3 | 160 | 426 | 270 | 534 | 2.34e-14 | 76.6 |
| Msa0404220 | AT2G32630.1 | 24.014 | 279 | 189 | 7 | 158 | 426 | 294 | 559 | 3.96e-12 | 69.3 |
| Msa0404220 | AT3G06920.2 | 20.968 | 310 | 229 | 7 | 159 | 464 | 183 | 480 | 8.70e-12 | 68.6 |
| Msa0404220 | AT3G06920.3 | 20.968 | 310 | 229 | 7 | 159 | 464 | 183 | 480 | 8.70e-12 | 68.6 |
| Msa0404220 | AT3G06920.1 | 20.968 | 310 | 229 | 7 | 159 | 464 | 169 | 466 | 1.05e-11 | 68.2 |
Find 190 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTAATCCATTAGAATTTA+TGG | 0.026049 | 3_2:+34996910 | Msa0404220:three_prime_UTR |
| GAGACTGTTTCCATTCTTAA+AGG | 0.176026 | 3_2:+34996869 | Msa0404220:CDS |
| ATTAGCCATAGCTGAATATT+TGG | 0.185459 | 3_2:+34996676 | Msa0404220:CDS |
| CATTGCCAGTGCTTCAAAAT+TGG | 0.193795 | 3_2:+34994905 | Msa0404220:CDS |
| AATCATTGACCAGCTGAAAA+TGG | 0.194638 | 3_2:-34997466 | None:intergenic |
| AGTTTCATCATTTCATTATA+AGG | 0.208074 | 3_2:-34995915 | None:intergenic |
| TCTTCCACCAACTGCCTTAC+TGG | 0.224446 | 3_2:-34996309 | None:intergenic |
| CACTCACGTTACTAGGGTTC+TGG | 0.230426 | 3_2:-34999619 | Msa0404230:CDS |
| AGAGGGCCAAGGCGCGATTT+TGG | 0.235373 | 3_2:-34999361 | Msa0404230:CDS |
| CCATTCTCTGAAGATTCTTC+TGG | 0.238798 | 3_2:-34996396 | None:intergenic |
| ATGTAAACAACACGTGTATT+AGG | 0.239103 | 3_2:-34996969 | None:intergenic |
| GAAGACAGAGTATAAATTAA+TGG | 0.266357 | 3_2:+34997506 | Msa0404220:three_prime_UTR |
| ATTAATGGCTATCAAGCTTT+TGG | 0.270529 | 3_2:+34997521 | Msa0404220:three_prime_UTR |
| CATGAACGTCTCAGCTTTAC+TGG | 0.276241 | 3_2:-34995853 | None:intergenic |
| TAAAATCTTCTTCAACATAT+TGG | 0.276929 | 3_2:+34999540 | Msa0404220:three_prime_UTR |
| TTTGGTATATTTGTAGAATC+TGG | 0.278988 | 3_2:+34997539 | Msa0404220:three_prime_UTR |
| AAATATTCACCTCATGAAAA+AGG | 0.287129 | 3_2:-34997038 | None:intergenic |
| TCGCGCCTTGGCCCTCTCAT+AGG | 0.290203 | 3_2:+34999367 | Msa0404220:three_prime_UTR |
| AAGTGGGCTCTTGAACTAAA+AGG | 0.296086 | 3_2:-34999572 | Msa0404230:CDS |
| ATCACAGATATTCATAATTT+AGG | 0.309949 | 3_2:+34996734 | Msa0404220:CDS |
| ATTTCCCACGTCTTGTAGTT+TGG | 0.313223 | 3_2:-34996542 | None:intergenic |
| TTTGGATTTGATGAGCCTTC+TGG | 0.315146 | 3_2:-34994974 | None:intergenic |
| AATGATCAATAAAGACAAAA+TGG | 0.322417 | 3_2:+34996835 | Msa0404220:CDS |
| GGAGACTCACTCACGTTACT+AGG | 0.328682 | 3_2:-34999626 | Msa0404230:CDS |
| CTGCGAAGAGAAGAAGTATA+TGG | 0.336111 | 3_2:-34994757 | None:intergenic |
| GTTTCATCATTTCATTATAA+GGG | 0.337687 | 3_2:-34995914 | None:intergenic |
| AAATTGCCGCTAAATGTAAA+TGG | 0.340649 | 3_2:-34994607 | None:intergenic |
| CATGTTCAAGCTGAAGTGTT+TGG | 0.351636 | 3_2:+34996989 | Msa0404220:three_prime_UTR |
| GATATTCATAATTTAGGTCT+TGG | 0.351730 | 3_2:+34996740 | Msa0404220:CDS |
| GACATCTTCATCAGCTTAAG+AGG | 0.360365 | 3_2:-34998647 | Msa0404230:exon |
| GGCGTGCATTCTTTGATAAC+AGG | 0.364374 | 3_2:+34998718 | Msa0404220:three_prime_UTR |
| AATCACTAGTGATTCTGATA+TGG | 0.369693 | 3_2:+34999442 | Msa0404220:three_prime_UTR |
| TGTGATGAGGGAGAGCGATA+TGG | 0.373547 | 3_2:+34996044 | Msa0404220:CDS |
| GGCAATGGAGTTTGCGTTGA+AGG | 0.373565 | 3_2:-34994889 | None:intergenic |
| ACAGGTACCTTCTTATAAAC+AGG | 0.378107 | 3_2:+34999485 | Msa0404220:three_prime_UTR |
| AAATGATGAGAATGTTGAAA+TGG | 0.383490 | 3_2:+34996103 | Msa0404220:CDS |
| CCCAGTGAAGCCTTTAAGAA+TGG | 0.389532 | 3_2:-34996879 | None:intergenic |
| GAGCAATCCATAAATTCTAA+TGG | 0.389560 | 3_2:-34996917 | None:intergenic |
| GGCTTTGCTGATATTGCTGT+TGG | 0.390337 | 3_2:-34998850 | Msa0404230:CDS |
| ATGTTCTGTCTTACAACCTT+TGG | 0.391181 | 3_2:+34996012 | Msa0404220:CDS |
| TTCCCTCAAGTCCACTTTCA+AGG | 0.391350 | 3_2:+34998899 | Msa0404220:three_prime_UTR |
| CATGGAGAAGCTCTATGAAC+TGG | 0.396411 | 3_2:+34995872 | Msa0404220:CDS |
| TATTGCCATGAAAAGAGCTT+TGG | 0.402179 | 3_2:+34996610 | Msa0404220:CDS |
| CACTTGACCCTCAGGACAAA+TGG | 0.402811 | 3_2:+34999590 | Msa0404220:three_prime_UTR |
| AACTTCAGAGCATGATCAGC+TGG | 0.404901 | 3_2:-34995705 | None:intergenic |
| TGTAAACAACACGTGTATTA+GGG | 0.404953 | 3_2:-34996968 | None:intergenic |
| GGCTAAATTCGCCGATGATA+AGG | 0.406052 | 3_2:-34999339 | Msa0404230:intron |
| TCCATTCTTAAAGGCTTCAC+TGG | 0.406952 | 3_2:+34996878 | Msa0404220:CDS |
| TAACAAGCTTGGTGAAGCTT+GGG | 0.412299 | 3_2:+34996360 | Msa0404220:CDS |
| CTTAAAGGCTTCACTGGGTA+AGG | 0.413189 | 3_2:+34996884 | Msa0404220:CDS |
| ATCCTTGAAAGTGGACTTGA+GGG | 0.416245 | 3_2:-34998901 | Msa0404230:CDS |
| CCATGGACTCTGTATCAATC+AGG | 0.416951 | 3_2:+34998779 | Msa0404220:three_prime_UTR |
| CTTGAGGGAAGGCGCTACTT+TGG | 0.416974 | 3_2:-34998886 | Msa0404230:CDS |
| AGGAGGGAGTCTTGCGGCTG+TGG | 0.422261 | 3_2:+34996282 | Msa0404220:CDS |
| TAGAGTATGTTGATGAGATC+TGG | 0.424571 | 3_2:-34999418 | Msa0404230:CDS |
| GCTTTCTTTCCAGCTGAGTC+AGG | 0.427827 | 3_2:-34995786 | None:intergenic |
| CAGTAAAGCTGAGACGTTCA+TGG | 0.430914 | 3_2:+34995854 | Msa0404220:CDS |
| TCATTGAAGGATATGTCAAT+TGG | 0.432642 | 3_2:+34996567 | Msa0404220:CDS |
| TTTGCACACAGGTATTCAAC+TGG | 0.435844 | 3_2:+34995652 | Msa0404220:intron |
| GAATGCGTGATTGTAGCGTT+TGG | 0.439592 | 3_2:-34994992 | None:intergenic |
| TGTTAGTATGCAAATATAGT+TGG | 0.439822 | 3_2:-34996342 | None:intergenic |
| TACTTTGGAGGTGAAAATAT+AGG | 0.440103 | 3_2:-34998871 | Msa0404230:CDS |
| ATAACATTTGTTAGAGAACT+AGG | 0.446766 | 3_2:-34999690 | Msa0404230:five_prime_UTR |
| CCAGAAGAATCTTCAGAGAA+TGG | 0.455350 | 3_2:+34996396 | Msa0404220:CDS |
| GTGATGAGGGAGAGCGATAT+GGG | 0.460171 | 3_2:+34996045 | Msa0404220:CDS |
| ATCATTGACCAGCTGAAAAT+GGG | 0.460791 | 3_2:-34997465 | None:intergenic |
| ACATGTAGACAGTTTCTCTT+CGG | 0.461851 | 3_2:-34996207 | None:intergenic |
| TTACCGTCATGCACAAGAAC+AGG | 0.465185 | 3_2:+34999467 | Msa0404220:three_prime_UTR |
| CCAGCTGAAAATGGGACAAT+TGG | 0.466279 | 3_2:-34997457 | None:intergenic |
| AATGATGAGAATGTTGAAAT+GGG | 0.468069 | 3_2:+34996104 | Msa0404220:CDS |
| CGCGCCTTGGCCCTCTCATA+GGG | 0.469964 | 3_2:+34999368 | Msa0404220:three_prime_UTR |
| AGCTGATCATGCTCTGAAGT+TGG | 0.470813 | 3_2:+34995707 | Msa0404220:CDS |
| GCCACGTAGAAGTGGGAGAT+AGG | 0.471094 | 3_2:-34995811 | None:intergenic |
| AGTGGGCTCTTGAACTAAAA+GGG | 0.471204 | 3_2:-34999571 | Msa0404230:CDS |
| CTAACAAGCTTGGTGAAGCT+TGG | 0.471247 | 3_2:+34996359 | Msa0404220:CDS |
| CAGAAGAATCTTCAGAGAAT+GGG | 0.472581 | 3_2:+34996397 | Msa0404220:CDS |
| ACTCACGTTACTAGGGTTCT+GGG | 0.475091 | 3_2:-34999618 | Msa0404230:CDS |
| CTGAATATTTGGAGAAATGT+GGG | 0.476542 | 3_2:+34996687 | Msa0404220:CDS |
| GGATAACTAGGGGTACCTTT+CGG | 0.478712 | 3_2:-34995959 | None:intergenic |
| GAAGGAGGAAAAGCTGCAAT+TGG | 0.478844 | 3_2:+34997587 | Msa0404220:three_prime_UTR |
| GCGGCTGTGGGAAGCCAGTA+AGG | 0.479826 | 3_2:+34996295 | Msa0404220:CDS |
| TGCGAAGAGAAGAAGTATAT+GGG | 0.480978 | 3_2:-34994756 | None:intergenic |
| GTATCACGGCGGTGAGAGAT+TGG | 0.481133 | 3_2:-34994696 | None:intergenic |
| GTTGTAAGACAGAACATTCA+AGG | 0.484662 | 3_2:-34996006 | None:intergenic |
| GAGGGAAGGCGCTACTTTGG+AGG | 0.487384 | 3_2:-34998883 | Msa0404230:CDS |
| CTTCAAAATTGGATCGATCA+AGG | 0.488611 | 3_2:+34994916 | Msa0404220:CDS |
| GCTTTGCTGATATTGCTGTT+GGG | 0.489214 | 3_2:-34998849 | Msa0404230:CDS |
| CAAGAGCCCACTTGACCCTC+AGG | 0.492284 | 3_2:+34999582 | Msa0404220:three_prime_UTR |
| CTATGTTGAAAGACTGCCAT+TGG | 0.497964 | 3_2:+34996633 | Msa0404220:CDS |
| CCACTTCTACGTGGCTATGT+AGG | 0.500824 | 3_2:+34995819 | Msa0404220:CDS |
| GTTTAACCATTTACATTTAG+CGG | 0.503561 | 3_2:+34994601 | Msa0404220:five_prime_UTR |
| ATACGCCTCTTTGAAGCAAA+AGG | 0.504517 | 3_2:+34996262 | Msa0404220:CDS |
| ATATGTCAATTGGCAAAAGA+TGG | 0.504962 | 3_2:+34996577 | Msa0404220:CDS |
| ACGTGGGAAATTCTCATTGA+AGG | 0.506864 | 3_2:+34996554 | Msa0404220:CDS |
| TTCTTTGTGGCGGCCTCCAA+TGG | 0.509216 | 3_2:-34996649 | None:intergenic |
| GCCAATGTGTATATGAAAGC+AGG | 0.509662 | 3_2:+34996149 | Msa0404220:CDS |
| ATGGCTAATACAATTCTTTG+TGG | 0.512455 | 3_2:-34996662 | None:intergenic |
| TTTCTCCAAATATTCAGCTA+TGG | 0.517860 | 3_2:-34996681 | None:intergenic |
| AAGTTATCAACGCAAGCAAA+TGG | 0.522118 | 3_2:+34994576 | Msa0404220:five_prime_UTR |
| ATGCGTATACCTGACTCAGC+TGG | 0.523390 | 3_2:+34995777 | Msa0404220:CDS |
| GGGTAGTCCATTTGTCCTGA+GGG | 0.524592 | 3_2:-34999597 | Msa0404230:CDS |
| CCATTCTTAAAGGCTTCACT+GGG | 0.526110 | 3_2:+34996879 | Msa0404220:CDS |
| GCGATATGGGGTTGCAGCAG+TGG | 0.527736 | 3_2:+34996058 | Msa0404220:CDS |
| GCTGAATATTTGGAGAAATG+TGG | 0.530476 | 3_2:+34996686 | Msa0404220:CDS |
| CCTGATTGATACAGAGTCCA+TGG | 0.533258 | 3_2:-34998779 | Msa0404230:CDS |
| GTAGAATCTGGAAAAGAAGA+TGG | 0.534042 | 3_2:+34997551 | Msa0404220:three_prime_UTR |
| CACACAGGTATTCAACTGGA+TGG | 0.535536 | 3_2:+34995656 | Msa0404220:intron |
| AATTTGAAGATCCTTGAAAG+TGG | 0.535582 | 3_2:-34998910 | Msa0404230:CDS |
| TGGATGAGTGCTTGTGATGA+GGG | 0.538983 | 3_2:+34996032 | Msa0404220:CDS |
| ACGCTACAATCACGCATTCG+AGG | 0.542785 | 3_2:+34994996 | Msa0404220:CDS |
| TCTGCCGTGAAGTGCTTCAT+CGG | 0.544003 | 3_2:+34994648 | Msa0404220:five_prime_UTR |
| GGGGTAGTCCATTTGTCCTG+AGG | 0.544193 | 3_2:-34999598 | Msa0404230:CDS |
| GTATAATCCTGTTTATAAGA+AGG | 0.544339 | 3_2:-34999492 | Msa0404230:CDS |
| TACGTGGCTATGTAGGAGAT+AGG | 0.544359 | 3_2:+34995826 | Msa0404220:CDS |
| CTCTCACCGCCGTGATACGA+CGG | 0.545445 | 3_2:+34994701 | Msa0404220:CDS |
| TTTAGCCCAAAATCGCGCCT+TGG | 0.545817 | 3_2:+34999355 | Msa0404220:three_prime_UTR |
| GTCGCCGATGAAGCACTTCA+CGG | 0.546136 | 3_2:-34994652 | None:intergenic |
| AAGAAAGTCATCGAAGTAAG+TGG | 0.546614 | 3_2:+34998747 | Msa0404220:three_prime_UTR |
| TGGTTCGCCATCTGAAGCTA+CGG | 0.548716 | 3_2:-34994676 | None:intergenic |
| CAATAAAGACAAAATGGAGA+TGG | 0.549030 | 3_2:+34996841 | Msa0404220:CDS |
| CATTTGTCCTGAGGGTCAAG+TGG | 0.551709 | 3_2:-34999589 | Msa0404230:CDS |
| AGGTAACAAGCTTTCATCAT+CGG | 0.555005 | 3_2:+34994936 | Msa0404220:CDS |
| TGTTGAAAGACTGCCATTGG+AGG | 0.555843 | 3_2:+34996636 | Msa0404220:CDS |
| TATTTGCATACTAACAAGCT+TGG | 0.557592 | 3_2:+34996349 | Msa0404220:CDS |
| ATGAGAATGTTGAAATGGGA+TGG | 0.563565 | 3_2:+34996108 | Msa0404220:CDS |
| TCCTGCTTTCATATACACAT+TGG | 0.565526 | 3_2:-34996150 | None:intergenic |
| TTAGGAGCATATGTGCGGAA+TGG | 0.567056 | 3_2:+34996464 | Msa0404220:CDS |
| AACTAGGAATGAGAAAGAGC+AGG | 0.568013 | 3_2:-34999674 | Msa0404230:five_prime_UTR |
| GCATCTCCACACATTGCAGA+AGG | 0.568052 | 3_2:+34996511 | Msa0404220:CDS |
| ATGGAGAAGCTCTATGAACT+GGG | 0.568445 | 3_2:+34995873 | Msa0404220:CDS |
| CTGTCTACATGTAATCGTCT+TGG | 0.569357 | 3_2:+34996218 | Msa0404220:CDS |
| CATGATCAGCTGGGTTTATG+CGG | 0.572059 | 3_2:-34995695 | None:intergenic |
| ATTTGTCCTGAGGGTCAAGT+GGG | 0.573803 | 3_2:-34999588 | Msa0404230:CDS |
| CGTGTCGTACCGTCGTATCA+CGG | 0.574617 | 3_2:-34994710 | None:intergenic |
| GCCCTCTCATAGGGATCATG+TGG | 0.575393 | 3_2:+34999377 | Msa0404220:three_prime_UTR |
| GAAGCCAGTAAGGCAGTTGG+TGG | 0.575582 | 3_2:+34996305 | Msa0404220:CDS |
| TAGGGATCATGTGGAAGAAG+AGG | 0.575719 | 3_2:+34999386 | Msa0404220:three_prime_UTR |
| GCTCTATGAACTGGGGCTAG+TGG | 0.575872 | 3_2:+34995881 | Msa0404220:CDS |
| CGCCTCTTTGAAGCAAAAGG+AGG | 0.583122 | 3_2:+34996265 | Msa0404220:CDS |
| GAGACTCACTCACGTTACTA+GGG | 0.583299 | 3_2:-34999625 | Msa0404230:CDS |
| TTGGATGAGTGCTTGTGATG+AGG | 0.583463 | 3_2:+34996031 | Msa0404220:CDS |
| CCTACATAGCCACGTAGAAG+TGG | 0.584375 | 3_2:-34995819 | None:intergenic |
| ACTTCAGAGCATGATCAGCT+GGG | 0.585003 | 3_2:-34995704 | None:intergenic |
| GATCCTTGAAAGTGGACTTG+AGG | 0.587591 | 3_2:-34998902 | Msa0404230:CDS |
| GTAAGTGGTAAGTTTAGCCA+TGG | 0.594981 | 3_2:+34998762 | Msa0404220:three_prime_UTR |
| AACTGAGATGCATCTCCAGA+AGG | 0.596914 | 3_2:+34994959 | Msa0404220:CDS |
| ACGTGGCTATGTAGGAGATA+GGG | 0.597576 | 3_2:+34995827 | Msa0404220:CDS |
| GGAGGGAGTCTTGCGGCTGT+GGG | 0.599301 | 3_2:+34996283 | Msa0404220:CDS |
| AATAGGAGAGGAACAACAGA+AGG | 0.601970 | 3_2:-34998953 | Msa0404230:CDS |
| CATCACAAGCACTCATCCAA+AGG | 0.605501 | 3_2:-34996028 | None:intergenic |
| TTTATTTGTTGGATAACTAG+GGG | 0.607266 | 3_2:-34995969 | None:intergenic |
| GGCGACGCCGTAGCTTCAGA+TGG | 0.607322 | 3_2:+34994669 | Msa0404220:exon |
| GCTAATACAATTCTTTGTGG+CGG | 0.610024 | 3_2:-34996659 | None:intergenic |
| AGCCACCCTTCTGCAATGTG+TGG | 0.612657 | 3_2:-34996517 | None:intergenic |
| GCCTCTTTGAAGCAAAAGGA+GGG | 0.615558 | 3_2:+34996266 | Msa0404220:CDS |
| TCCACATGATCCCTATGAGA+GGG | 0.621697 | 3_2:-34999378 | Msa0404230:CDS |
| GTTCAAGCTGAAGTGTTTGG+AGG | 0.622053 | 3_2:+34996992 | Msa0404220:three_prime_UTR |
| GATGGTCACCAACCAACTGA+AGG | 0.622078 | 3_2:+34997569 | Msa0404220:three_prime_UTR |
| ATGAAGATGTCAAGACCTTG+TGG | 0.622264 | 3_2:+34998659 | Msa0404220:three_prime_UTR |
| AACAAGCTTGGTGAAGCTTG+GGG | 0.626479 | 3_2:+34996361 | Msa0404220:CDS |
| TGGGAAGCCAGTAAGGCAGT+TGG | 0.629575 | 3_2:+34996302 | Msa0404220:CDS |
| CATCTCCACACATTGCAGAA+GGG | 0.629974 | 3_2:+34996512 | Msa0404220:CDS |
| GTGGGCTCTTGAACTAAAAG+GGG | 0.630143 | 3_2:-34999570 | Msa0404230:CDS |
| TTCCACATGATCCCTATGAG+AGG | 0.630417 | 3_2:-34999379 | Msa0404230:CDS |
| CTCCACACATTGCAGAAGGG+TGG | 0.631048 | 3_2:+34996515 | Msa0404220:CDS |
| TTGTAAGACAGAACATTCAA+GGG | 0.631305 | 3_2:-34996005 | None:intergenic |
| CTACATAGCCACGTAGAAGT+GGG | 0.632992 | 3_2:-34995818 | None:intergenic |
| GGTCACCAACCAACTGAAGG+AGG | 0.633472 | 3_2:+34997572 | Msa0404220:three_prime_UTR |
| TTGAAAGTGGACTTGAGGGA+AGG | 0.636293 | 3_2:-34998897 | Msa0404230:CDS |
| GCTGTCCAAACTACAAGACG+TGG | 0.636885 | 3_2:+34996537 | Msa0404220:CDS |
| TACCTTTCGGTACTCACATG+TGG | 0.641449 | 3_2:-34995946 | None:intergenic |
| GCACAGCAAGGCCTTCCACA+AGG | 0.644456 | 3_2:-34998674 | Msa0404230:CDS |
| AGATGTCAAGACCTTGTGGA+AGG | 0.645290 | 3_2:+34998663 | Msa0404220:three_prime_UTR |
| CTCACGTTACTAGGGTTCTG+GGG | 0.648274 | 3_2:-34999617 | Msa0404230:CDS |
| TCAAGTAACTTATCATGAGA+CGG | 0.652385 | 3_2:+34998697 | Msa0404220:three_prime_UTR |
| TGATCCCTATGAGAGGGCCA+AGG | 0.658261 | 3_2:-34999372 | Msa0404230:CDS |
| CAATTGGCAAAAGATGGATG+AGG | 0.660417 | 3_2:+34996583 | Msa0404220:CDS |
| ACGTAGAAGTGGGAGATAGG+CGG | 0.666086 | 3_2:-34995808 | None:intergenic |
| AAGGTGGTTCTTGAGCAGAA+AGG | 0.666643 | 3_2:-34996799 | None:intergenic |
| GCGAAGAGAAGAAGTATATG+GGG | 0.666763 | 3_2:-34994755 | None:intergenic |
| AGCAAAAGGAGGGAGTCTTG+CGG | 0.669308 | 3_2:+34996276 | Msa0404220:CDS |
| TAAGTTACTTGAGCACAGCA+AGG | 0.675812 | 3_2:-34998686 | Msa0404230:CDS |
| TGCCACATGTGAGTACCGAA+AGG | 0.679332 | 3_2:+34995944 | Msa0404220:CDS |
| GTACCTGTTCTTGTGCATGA+CGG | 0.690851 | 3_2:-34999470 | Msa0404230:CDS |
| GCCTATCTCCCACTTCTACG+TGG | 0.702332 | 3_2:+34995810 | Msa0404220:CDS |
| TGGAGAAGCTCTATGAACTG+GGG | 0.707353 | 3_2:+34995874 | Msa0404220:CDS |
| CGAGTGATAGAAGAAACTGT+AGG | 0.708991 | 3_2:-34998808 | Msa0404230:CDS |
| CTGTCCAAACTACAAGACGT+GGG | 0.720216 | 3_2:+34996538 | Msa0404220:CDS |
| TGATGAGGGAGAGCGATATG+GGG | 0.743042 | 3_2:+34996046 | Msa0404220:CDS |
| GTCGTACCGTCGTATCACGG+CGG | 0.782153 | 3_2:-34994707 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTTATTAATTCAGTA+CGG | + | chr3_2:34997332-34997351 | Msa0404220:intron | 10.0% |
| !!! | ATATTTATTTTCCTTTTACA+TGG | + | chr3_2:34998240-34998259 | Msa0404220:intron | 15.0% |
| !!! | TATTTATTTTCCTTTTACAT+GGG | + | chr3_2:34998241-34998260 | Msa0404220:intron | 15.0% |
| !!! | TATATTATTTTCCTTTATCA+TGG | + | chr3_2:34998297-34998316 | Msa0404220:intron | 15.0% |
| !! | ATAGAATACTATAATATCAA+GGG | - | chr3_2:34998336-34998355 | Msa0404230:three_prime_UTR | 15.0% |
| !! | TTGATATTATAGTATTCTAT+GGG | + | chr3_2:34998336-34998355 | Msa0404220:intron | 15.0% |
| !!! | CTTGTAAAAGTAATTTTAAT+GGG | - | chr3_2:34998393-34998412 | Msa0404230:three_prime_UTR | 15.0% |
| !!! | TCTTGTAAAAGTAATTTTAA+TGG | - | chr3_2:34998394-34998413 | Msa0404230:three_prime_UTR | 15.0% |
| !! | TATAACATATTGTATTGTAT+AGG | + | chr3_2:34998614-34998633 | Msa0404220:intron | 15.0% |
| !!! | TGATGATGTACTTTTTATTT+TGG | + | chr3_2:34995342-34995361 | Msa0404220:intron | 20.0% |
| !! | GTTTCATCATTTCATTATAA+GGG | - | chr3_2:34995917-34995936 | None:intergenic | 20.0% |
| !! | AGTTTCATCATTTCATTATA+AGG | - | chr3_2:34995918-34995937 | None:intergenic | 20.0% |
| !!! | TTTTATTTGTTGGATAACTA+GGG | - | chr3_2:34995973-34995992 | None:intergenic | 20.0% |
| !!! | CTTTATTTCGTTTTATTTGT+TGG | - | chr3_2:34995983-34996002 | None:intergenic | 20.0% |
| !! | ATCACAGATATTCATAATTT+AGG | + | chr3_2:34996734-34996753 | Msa0404220:CDS | 20.0% |
| !!! | TGTCTTTATTGATCATTTTA+AGG | - | chr3_2:34996832-34996851 | None:intergenic | 20.0% |
| !! | AATGATCAATAAAGACAAAA+TGG | + | chr3_2:34996835-34996854 | Msa0404220:CDS | 20.0% |
| !! | ATCTAATCCATTAGAATTTA+TGG | + | chr3_2:34996910-34996929 | Msa0404220:three_prime_UTR | 20.0% |
| !!! | ATTTTTTTGTGTAGTTAAGA+AGG | + | chr3_2:34997232-34997251 | Msa0404220:intron | 20.0% |
| !!! | TTTCTATGATTTTGAAAACT+GGG | - | chr3_2:34997301-34997320 | None:intergenic | 20.0% |
| !! | GTTAACAATAACATAAATCT+TGG | + | chr3_2:34997354-34997373 | Msa0404220:intron | 20.0% |
| !! | TAAAAAAGAATGTTAGGAAT+AGG | - | chr3_2:34997433-34997452 | None:intergenic | 20.0% |
| !!! | TGAATTTAATGAAGTTTTGA+AGG | + | chr3_2:34997875-34997894 | Msa0404220:intron | 20.0% |
| !! | CATAGAATACTATAATATCA+AGG | - | chr3_2:34998337-34998356 | Msa0404230:three_prime_UTR | 20.0% |
| !! | CTTGATATTATAGTATTCTA+TGG | + | chr3_2:34998335-34998354 | Msa0404220:intron | 20.0% |
| !! | TGATATTATAGTATTCTATG+GGG | + | chr3_2:34998337-34998356 | Msa0404220:intron | 20.0% |
| !! | ATTAACATATTGCATGATAT+TGG | + | chr3_2:34998532-34998551 | Msa0404220:intron | 20.0% |
| !!! | AATATGTTGAAGAAGATTTT+AGG | - | chr3_2:34999541-34999560 | Msa0404230:CDS | 20.0% |
| !! | TAAAATCTTCTTCAACATAT+TGG | + | chr3_2:34999540-34999559 | Msa0404220:three_prime_UTR | 20.0% |
| !! | TGTTTGATTAAAAGCAAAAA+TGG | - | chr3_2:34999654-34999673 | Msa0404230:exon | 20.0% |
| ! | GTTTAACCATTTACATTTAG+CGG | + | chr3_2:34994601-34994620 | Msa0404220:five_prime_UTR | 25.0% |
| !!! | AGTTCTAAAGTAGTTAATTG+TGG | + | chr3_2:34995070-34995089 | Msa0404220:intron | 25.0% |
| ! | AGTAGTAAATGAAAATGACA+AGG | + | chr3_2:34995167-34995186 | Msa0404220:intron | 25.0% |
| ! | GTAGTAAATGAAAATGACAA+GGG | + | chr3_2:34995168-34995187 | Msa0404220:intron | 25.0% |
| !!! | ATTTAGTTTGTTGCTTATGT+TGG | + | chr3_2:34995272-34995291 | Msa0404220:intron | 25.0% |
| !!! | TGTTTAGCTTATGCTTTTAT+AGG | + | chr3_2:34995300-34995319 | Msa0404220:intron | 25.0% |
| !!! | TGATGTACTTTTTATTTTGG+AGG | + | chr3_2:34995345-34995364 | Msa0404220:intron | 25.0% |
| ! | TGTTATTGCAATGTGATTTA+TGG | + | chr3_2:34995573-34995592 | Msa0404220:intron | 25.0% |
| ! | GTTATTGCAATGTGATTTAT+GGG | + | chr3_2:34995574-34995593 | Msa0404220:intron | 25.0% |
| !! | TTAATTATTCTTTTGCACAC+AGG | + | chr3_2:34995641-34995660 | Msa0404220:intron | 25.0% |
| !! | TTTATTTGTTGGATAACTAG+GGG | - | chr3_2:34995972-34995991 | None:intergenic | 25.0% |
| !!! | GTTTTATTTGTTGGATAACT+AGG | - | chr3_2:34995974-34995993 | None:intergenic | 25.0% |
| ! | AAATGATGAGAATGTTGAAA+TGG | + | chr3_2:34996103-34996122 | Msa0404220:CDS | 25.0% |
| ! | AATGATGAGAATGTTGAAAT+GGG | + | chr3_2:34996104-34996123 | Msa0404220:CDS | 25.0% |
| ! | TGTTAGTATGCAAATATAGT+TGG | - | chr3_2:34996345-34996364 | None:intergenic | 25.0% |
| ! | GATATTCATAATTTAGGTCT+TGG | + | chr3_2:34996740-34996759 | Msa0404220:CDS | 25.0% |
| !!! | TATTGATCATTTTAAGGACA+TGG | - | chr3_2:34996826-34996845 | None:intergenic | 25.0% |
| ! | AAATATTCACCTCATGAAAA+AGG | - | chr3_2:34997041-34997060 | None:intergenic | 25.0% |
| !!! | CTGCTAGTCTTTATAAAAAT+GGG | - | chr3_2:34997181-34997200 | None:intergenic | 25.0% |
| !!! | GTTTCTATGATTTTGAAAAC+TGG | - | chr3_2:34997302-34997321 | None:intergenic | 25.0% |
| ! | AATCAACAAAGATAAAGAAG+TGG | - | chr3_2:34997404-34997423 | None:intergenic | 25.0% |
| ! | ACTTCTTTATCTTTGTTGAT+TGG | + | chr3_2:34997403-34997422 | Msa0404220:intron | 25.0% |
| ! | GAAGACAGAGTATAAATTAA+TGG | + | chr3_2:34997506-34997525 | Msa0404220:three_prime_UTR | 25.0% |
| ! | TTTGGTATATTTGTAGAATC+TGG | + | chr3_2:34997539-34997558 | Msa0404220:three_prime_UTR | 25.0% |
| ! | AAAATAGACGAGTAAACAAA+AGG | - | chr3_2:34997641-34997660 | None:intergenic | 25.0% |
| ! | AACATATAGAGTATGTTTAG+TGG | - | chr3_2:34998028-34998047 | None:intergenic | 25.0% |
| ! | CTAAATCATAAATGACTCTT+GGG | - | chr3_2:34998205-34998224 | None:intergenic | 25.0% |
| ! | ACTAAATCATAAATGACTCT+TGG | - | chr3_2:34998206-34998225 | None:intergenic | 25.0% |
| ! | TCATTTATGATTTAGTGAGA+AGG | + | chr3_2:34998210-34998229 | Msa0404220:intron | 25.0% |
| ! | TAATGATTCTTCCATGATAA+AGG | - | chr3_2:34998311-34998330 | None:intergenic | 25.0% |
| ! | TAACGTCTTGATTAAATAAG+CGG | + | chr3_2:34998364-34998383 | Msa0404220:intron | 25.0% |
| !!! | TGTGTTTACATGATTAGTTT+AGG | + | chr3_2:34998438-34998457 | Msa0404220:intron | 25.0% |
| !!! | ATAGCTACCTTTTTCAAAAT+AGG | - | chr3_2:34998973-34998992 | Msa0404230:CDS | 25.0% |
| !!! | CTTTTGAGTAATGGTTTAAT+TGG | + | chr3_2:34999159-34999178 | Msa0404220:intron | 25.0% |
| ! | GTATAATCCTGTTTATAAGA+AGG | - | chr3_2:34999495-34999514 | Msa0404230:CDS | 25.0% |
| AAATTGCCGCTAAATGTAAA+TGG | - | chr3_2:34994610-34994629 | None:intergenic | 30.0% | |
| !! | ATTACTAGCTTTAGCCATAT+AGG | + | chr3_2:34995096-34995115 | Msa0404220:intron | 30.0% |
| !! | TTACTAGCTTTAGCCATATA+GGG | + | chr3_2:34995097-34995116 | Msa0404220:intron | 30.0% |
| ACAGAAATTCAACAGAGAAA+TGG | - | chr3_2:34995207-34995226 | None:intergenic | 30.0% | |
| ATTTCCAAAAAACCTTCAAG+CGG | - | chr3_2:34995242-34995261 | None:intergenic | 30.0% | |
| GCTATAGTGAAGTGATTATA+AGG | - | chr3_2:34995449-34995468 | None:intergenic | 30.0% | |
| AAGCTGTAATCAATCCATAA+TGG | - | chr3_2:34995503-34995522 | None:intergenic | 30.0% | |
| AAGATACTGTAACTGATCAT+CGG | + | chr3_2:34995528-34995547 | Msa0404220:intron | 30.0% | |
| AGTTAATCGCTAAAAACTGT+GGG | + | chr3_2:34995730-34995749 | Msa0404220:CDS | 30.0% | |
| TTGTAAGACAGAACATTCAA+GGG | - | chr3_2:34996008-34996027 | None:intergenic | 30.0% | |
| !!! | GGCATTTTTTAGAACTAGAA+TGG | - | chr3_2:34996189-34996208 | None:intergenic | 30.0% |
| TATTTGCATACTAACAAGCT+TGG | + | chr3_2:34996349-34996368 | Msa0404220:CDS | 30.0% | |
| ! | AGAGTCTCTAATGTTCTTTT+AGG | + | chr3_2:34996446-34996465 | Msa0404220:CDS | 30.0% |
| TCATTGAAGGATATGTCAAT+TGG | + | chr3_2:34996567-34996586 | Msa0404220:CDS | 30.0% | |
| ATATGTCAATTGGCAAAAGA+TGG | + | chr3_2:34996577-34996596 | Msa0404220:CDS | 30.0% | |
| ATGGCTAATACAATTCTTTG+TGG | - | chr3_2:34996665-34996684 | None:intergenic | 30.0% | |
| ATTAGCCATAGCTGAATATT+TGG | + | chr3_2:34996676-34996695 | Msa0404220:CDS | 30.0% | |
| TTTCTCCAAATATTCAGCTA+TGG | - | chr3_2:34996684-34996703 | None:intergenic | 30.0% | |
| CTGAATATTTGGAGAAATGT+GGG | + | chr3_2:34996687-34996706 | Msa0404220:CDS | 30.0% | |
| !! | ATCATTTTAAGGACATGGAA+AGG | - | chr3_2:34996821-34996840 | None:intergenic | 30.0% |
| CAATAAAGACAAAATGGAGA+TGG | + | chr3_2:34996841-34996860 | Msa0404220:CDS | 30.0% | |
| GAGCAATCCATAAATTCTAA+TGG | - | chr3_2:34996920-34996939 | None:intergenic | 30.0% | |
| TGTAAACAACACGTGTATTA+GGG | - | chr3_2:34996971-34996990 | None:intergenic | 30.0% | |
| ATGTAAACAACACGTGTATT+AGG | - | chr3_2:34996972-34996991 | None:intergenic | 30.0% | |
| ! | TATGTGATAATGTTGCACTT+TGG | - | chr3_2:34997134-34997153 | None:intergenic | 30.0% |
| !! | GCTGCTAGTCTTTATAAAAA+TGG | - | chr3_2:34997182-34997201 | None:intergenic | 30.0% |
| !!! | TGGTGATTTTAGTTGAATAG+TGG | + | chr3_2:34997374-34997393 | Msa0404220:intron | 30.0% |
| GGCTGATAAAAAAGAATGTT+AGG | - | chr3_2:34997439-34997458 | None:intergenic | 30.0% | |
| ! | ATTAATGGCTATCAAGCTTT+TGG | + | chr3_2:34997521-34997540 | Msa0404220:three_prime_UTR | 30.0% |
| !! | ACGAGTAAACAAAAGGTATT+GGG | - | chr3_2:34997634-34997653 | None:intergenic | 30.0% |
| TAGGTGAAAAATTCAAACCT+CGG | + | chr3_2:34997844-34997863 | Msa0404220:intron | 30.0% | |
| TTAAATTCAAAACTGTACCG+AGG | - | chr3_2:34997864-34997883 | None:intergenic | 30.0% | |
| AACATAAAGGCTAATAGACA+TGG | - | chr3_2:34998105-34998124 | None:intergenic | 30.0% | |
| TATTCTATCTCCCATGTAAA+AGG | - | chr3_2:34998254-34998273 | None:intergenic | 30.0% | |
| GATGTGTGTGTATGATATAT+GGG | - | chr3_2:34998567-34998586 | Msa0404230:three_prime_UTR | 30.0% | |
| TGATGTGTGTGTATGATATA+TGG | - | chr3_2:34998568-34998587 | Msa0404230:three_prime_UTR | 30.0% | |
| CATATTGTATTGTATAGGTG+TGG | + | chr3_2:34998619-34998638 | Msa0404220:intron | 30.0% | |
| TCAAGTAACTTATCATGAGA+CGG | + | chr3_2:34998697-34998716 | Msa0404220:three_prime_UTR | 30.0% | |
| ! | TACTTTGGAGGTGAAAATAT+AGG | - | chr3_2:34998874-34998893 | Msa0404230:CDS | 30.0% |
| AATTTGAAGATCCTTGAAAG+TGG | - | chr3_2:34998913-34998932 | Msa0404230:CDS | 30.0% | |
| !! | TTCCTCTCCTATTTTGAAAA+AGG | + | chr3_2:34998963-34998982 | Msa0404220:three_prime_UTR | 30.0% |
| !!! | TACCTTTTTCAAAATAGGAG+AGG | - | chr3_2:34998968-34998987 | Msa0404230:CDS | 30.0% |
| AAAAAGGTAGCTATAAATGC+TGG | + | chr3_2:34998979-34998998 | Msa0404220:three_prime_UTR | 30.0% | |
| !!! | AAGGTTGGTTTTTGTATTAG+AGG | + | chr3_2:34999019-34999038 | Msa0404220:intron | 30.0% |
| !! | ATGTTGAGACTTTTGAGTAA+TGG | + | chr3_2:34999150-34999169 | Msa0404220:intron | 30.0% |
| ! | ATCATGTTCTTTAGAAGTCA+TGG | + | chr3_2:34999308-34999327 | Msa0404220:intron | 30.0% |
| ! | TGGCTTTTATACCTTATCAT+CGG | + | chr3_2:34999328-34999347 | Msa0404220:intron | 30.0% |
| AATCACTAGTGATTCTGATA+TGG | + | chr3_2:34999442-34999461 | Msa0404220:three_prime_UTR | 30.0% | |
| TGATTAAAAGCAAAAATGGC+AGG | - | chr3_2:34999650-34999669 | Msa0404230:exon | 30.0% | |
| AAGTTATCAACGCAAGCAAA+TGG | + | chr3_2:34994576-34994595 | Msa0404220:five_prime_UTR | 35.0% | |
| ! | TGCGAAGAGAAGAAGTATAT+GGG | - | chr3_2:34994759-34994778 | None:intergenic | 35.0% |
| ! | AGCAGCATCAGTTTCTTTTT+GGG | + | chr3_2:34994778-34994797 | Msa0404220:CDS | 35.0% |
| CTTCAAAATTGGATCGATCA+AGG | + | chr3_2:34994916-34994935 | Msa0404220:CDS | 35.0% | |
| AGGTAACAAGCTTTCATCAT+CGG | + | chr3_2:34994936-34994955 | Msa0404220:CDS | 35.0% | |
| TTACATTCCTGCAATTTGTG+TGG | + | chr3_2:34995042-34995061 | Msa0404220:intron | 35.0% | |
| CTTTAGCCATATAGGGTTTA+GGG | + | chr3_2:34995104-34995123 | Msa0404220:intron | 35.0% | |
| CATAAACCCTAAACCCTATA+TGG | - | chr3_2:34995113-34995132 | None:intergenic | 35.0% | |
| TTTCCAAAAAACCTTCAAGC+GGG | - | chr3_2:34995241-34995260 | None:intergenic | 35.0% | |
| ! | CACTTCACTATAGCATTTTG+TGG | + | chr3_2:34995455-34995474 | Msa0404220:intron | 35.0% |
| !! | TTTTGTGGATTAATCGCTTC+AGG | + | chr3_2:34995470-34995489 | Msa0404220:intron | 35.0% |
| ! | GGTTTATGCGGAATTTTTGT+TGG | - | chr3_2:34995686-34995705 | None:intergenic | 35.0% |
| GAGTTAATCGCTAAAAACTG+TGG | + | chr3_2:34995729-34995748 | Msa0404220:CDS | 35.0% | |
| GTTGTAAGACAGAACATTCA+AGG | - | chr3_2:34996009-34996028 | None:intergenic | 35.0% | |
| ATGTTCTGTCTTACAACCTT+TGG | + | chr3_2:34996012-34996031 | Msa0404220:CDS | 35.0% | |
| ATGAGAATGTTGAAATGGGA+TGG | + | chr3_2:34996108-34996127 | Msa0404220:CDS | 35.0% | |
| TCCTGCTTTCATATACACAT+TGG | - | chr3_2:34996153-34996172 | None:intergenic | 35.0% | |
| ACATGTAGACAGTTTCTCTT+CGG | - | chr3_2:34996210-34996229 | None:intergenic | 35.0% | |
| CAGAAGAATCTTCAGAGAAT+GGG | + | chr3_2:34996397-34996416 | Msa0404220:CDS | 35.0% | |
| !! | TTCTTTTAGGAGCATATGTG+CGG | + | chr3_2:34996459-34996478 | Msa0404220:CDS | 35.0% |
| TATTGCCATGAAAAGAGCTT+TGG | + | chr3_2:34996610-34996629 | Msa0404220:CDS | 35.0% | |
| GCTAATACAATTCTTTGTGG+CGG | - | chr3_2:34996662-34996681 | None:intergenic | 35.0% | |
| GCTGAATATTTGGAGAAATG+TGG | + | chr3_2:34996686-34996705 | Msa0404220:CDS | 35.0% | |
| !! | ATTTTAAGGACATGGAAAGG+TGG | - | chr3_2:34996818-34996837 | None:intergenic | 35.0% |
| GAGACTGTTTCCATTCTTAA+AGG | + | chr3_2:34996869-34996888 | Msa0404220:CDS | 35.0% | |
| !! | TGAAGTCAACCTTTTTCATG+AGG | + | chr3_2:34997029-34997048 | Msa0404220:three_prime_UTR | 35.0% |
| !! | CTATGATTTTGAAAACTGGG+AGG | - | chr3_2:34997298-34997317 | None:intergenic | 35.0% |
| ATCATTGACCAGCTGAAAAT+GGG | - | chr3_2:34997468-34997487 | None:intergenic | 35.0% | |
| AATCATTGACCAGCTGAAAA+TGG | - | chr3_2:34997469-34997488 | None:intergenic | 35.0% | |
| GTAGAATCTGGAAAAGAAGA+TGG | + | chr3_2:34997551-34997570 | Msa0404220:three_prime_UTR | 35.0% | |
| !! | CGAGTAAACAAAAGGTATTG+GGG | - | chr3_2:34997633-34997652 | None:intergenic | 35.0% |
| ! | GACGAGTAAACAAAAGGTAT+TGG | - | chr3_2:34997635-34997654 | None:intergenic | 35.0% |
| TATACTTTCCCAGGTTAACA+GGG | - | chr3_2:34997709-34997728 | None:intergenic | 35.0% | |
| ATATACTTTCCCAGGTTAAC+AGG | - | chr3_2:34997710-34997729 | None:intergenic | 35.0% | |
| ! | TGTTAACCTGGGAAAGTATA+TGG | + | chr3_2:34997709-34997728 | Msa0404220:intron | 35.0% |
| ! | GTTAACCTGGGAAAGTATAT+GGG | + | chr3_2:34997710-34997729 | Msa0404220:intron | 35.0% |
| ATATTCCCATATACTTTCCC+AGG | - | chr3_2:34997718-34997737 | None:intergenic | 35.0% | |
| GAGTATCTAGTCATCTAACA+CGG | - | chr3_2:34997806-34997825 | None:intergenic | 35.0% | |
| TATAGCTAGCAATGAAGGTA+TGG | - | chr3_2:34997988-34998007 | None:intergenic | 35.0% | |
| GAAGAGGAAACGAAACATAA+AGG | - | chr3_2:34998118-34998137 | None:intergenic | 35.0% | |
| CATAAATGACTCTTGGGATA+AGG | - | chr3_2:34998199-34998218 | None:intergenic | 35.0% | |
| ! | ATTAGTTTAGGTTTGAGCTC+AGG | + | chr3_2:34998450-34998469 | Msa0404220:intron | 35.0% |
| TGTGTGTATGATAATATGCG+TGG | - | chr3_2:34998497-34998516 | Msa0404230:three_prime_UTR | 35.0% | |
| AAGAAAGTCATCGAAGTAAG+TGG | + | chr3_2:34998747-34998766 | Msa0404220:three_prime_UTR | 35.0% | |
| !!! | TGTTGGGTTTTTTGGATTCT+GGG | - | chr3_2:34998836-34998855 | Msa0404230:CDS | 35.0% |
| !!! | GATATTGCTGTTGGGTTTTT+TGG | - | chr3_2:34998844-34998863 | Msa0404230:CDS | 35.0% |
| CACACTGAAATAGAAAAGGT+TGG | + | chr3_2:34999004-34999023 | Msa0404220:intron | 35.0% | |
| !! | TTGGTTTTTGTATTAGAGGC+TGG | + | chr3_2:34999023-34999042 | Msa0404220:intron | 35.0% |
| GATCAAACCAAACATCAAGT+TGG | + | chr3_2:34999252-34999271 | Msa0404220:intron | 35.0% | |
| ! | TAGAGTATGTTGATGAGATC+TGG | - | chr3_2:34999421-34999440 | Msa0404230:CDS | 35.0% |
| ACAGGTACCTTCTTATAAAC+AGG | + | chr3_2:34999485-34999504 | Msa0404220:three_prime_UTR | 35.0% | |
| ! | CATTTAGCGGCAATTTTCTG+TGG | + | chr3_2:34994614-34994633 | Msa0404220:five_prime_UTR | 40.0% |
| ! | GCGAAGAGAAGAAGTATATG+GGG | - | chr3_2:34994758-34994777 | None:intergenic | 40.0% |
| ! | CTGCGAAGAGAAGAAGTATA+TGG | - | chr3_2:34994760-34994779 | None:intergenic | 40.0% |
| ! | CAGCAGCATCAGTTTCTTTT+TGG | + | chr3_2:34994777-34994796 | Msa0404220:CDS | 40.0% |
| !!! | CAATTTTGAAGCACTGGCAA+TGG | - | chr3_2:34994907-34994926 | None:intergenic | 40.0% |
| CATTGCCAGTGCTTCAAAAT+TGG | + | chr3_2:34994905-34994924 | Msa0404220:CDS | 40.0% | |
| !!! | TCGATCCAATTTTGAAGCAC+TGG | - | chr3_2:34994913-34994932 | None:intergenic | 40.0% |
| TTTGGATTTGATGAGCCTTC+TGG | - | chr3_2:34994977-34994996 | None:intergenic | 40.0% | |
| GCTTTAGCCATATAGGGTTT+AGG | + | chr3_2:34995103-34995122 | Msa0404220:intron | 40.0% | |
| ! | ATTTTCCTTTTCCCGCTTGA+AGG | + | chr3_2:34995227-34995246 | Msa0404220:intron | 40.0% |
| AAAAACCTTCAAGCGGGAAA+AGG | - | chr3_2:34995235-34995254 | None:intergenic | 40.0% | |
| !!! | TTTCCCGCTTGAAGGTTTTT+TGG | + | chr3_2:34995235-34995254 | Msa0404220:intron | 40.0% |
| GCTCAATACGCTGAACTTAA+AGG | - | chr3_2:34995398-34995417 | None:intergenic | 40.0% | |
| ! | CTTCAGGCTACTTTCCATTA+TGG | + | chr3_2:34995486-34995505 | Msa0404220:intron | 40.0% |
| TTTGCACACAGGTATTCAAC+TGG | + | chr3_2:34995652-34995671 | Msa0404220:intron | 40.0% | |
| ATGGAGAAGCTCTATGAACT+GGG | + | chr3_2:34995873-34995892 | Msa0404220:CDS | 40.0% | |
| GCCAATGTGTATATGAAAGC+AGG | + | chr3_2:34996149-34996168 | Msa0404220:CDS | 40.0% | |
| CTGTCTACATGTAATCGTCT+TGG | + | chr3_2:34996218-34996237 | Msa0404220:CDS | 40.0% | |
| !! | ATACGCCTCTTTGAAGCAAA+AGG | + | chr3_2:34996262-34996281 | Msa0404220:CDS | 40.0% |
| ! | TAACAAGCTTGGTGAAGCTT+GGG | + | chr3_2:34996360-34996379 | Msa0404220:CDS | 40.0% |
| ! | CCATTCTCTGAAGATTCTTC+TGG | - | chr3_2:34996399-34996418 | None:intergenic | 40.0% |
| CCAGAAGAATCTTCAGAGAA+TGG | + | chr3_2:34996396-34996415 | Msa0404220:CDS | 40.0% | |
| ATTTCCCACGTCTTGTAGTT+TGG | - | chr3_2:34996545-34996564 | None:intergenic | 40.0% | |
| ACGTGGGAAATTCTCATTGA+AGG | + | chr3_2:34996554-34996573 | Msa0404220:CDS | 40.0% | |
| CAATTGGCAAAAGATGGATG+AGG | + | chr3_2:34996583-34996602 | Msa0404220:CDS | 40.0% | |
| ! | CATAGCCAAAGCTCTTTTCA+TGG | - | chr3_2:34996618-34996637 | None:intergenic | 40.0% |
| CTATGTTGAAAGACTGCCAT+TGG | + | chr3_2:34996633-34996652 | Msa0404220:CDS | 40.0% | |
| TCCATTCTTAAAGGCTTCAC+TGG | + | chr3_2:34996878-34996897 | Msa0404220:CDS | 40.0% | |
| CCATTCTTAAAGGCTTCACT+GGG | + | chr3_2:34996879-34996898 | Msa0404220:CDS | 40.0% | |
| ! | CATGTTCAAGCTGAAGTGTT+TGG | + | chr3_2:34996989-34997008 | Msa0404220:three_prime_UTR | 40.0% |
| TATCATCATGTTCTCACGGA+TGG | - | chr3_2:34997685-34997704 | None:intergenic | 40.0% | |
| GGGTTATCATCATGTTCTCA+CGG | - | chr3_2:34997689-34997708 | None:intergenic | 40.0% | |
| TGATGATAACCCTGTTAACC+TGG | + | chr3_2:34997697-34997716 | Msa0404220:intron | 40.0% | |
| GATGATAACCCTGTTAACCT+GGG | + | chr3_2:34997698-34997717 | Msa0404220:intron | 40.0% | |
| CATTCTCCATTTAGATTGCC+AGG | + | chr3_2:34997777-34997796 | Msa0404220:intron | 40.0% | |
| ! | CATAAGGGCAGTTTTCTAAC+AGG | - | chr3_2:34997936-34997955 | None:intergenic | 40.0% |
| TCATCGCTACATCAGCATAA+GGG | - | chr3_2:34997951-34997970 | None:intergenic | 40.0% | |
| ATCATCGCTACATCAGCATA+AGG | - | chr3_2:34997952-34997971 | None:intergenic | 40.0% | |
| TTATGCTGATGTAGCGATGA+TGG | + | chr3_2:34997951-34997970 | Msa0404220:intron | 40.0% | |
| CGTGATATAGCTAGCAATGA+AGG | - | chr3_2:34997993-34998012 | None:intergenic | 40.0% | |
| ACATCGCAATTCAACTGAAG+AGG | - | chr3_2:34998134-34998153 | None:intergenic | 40.0% | |
| ! | ATACTCTTCAGCCTTATCCA+AGG | + | chr3_2:34998164-34998183 | Msa0404220:intron | 40.0% |
| GACATCTTCATCAGCTTAAG+AGG | - | chr3_2:34998650-34998669 | Msa0404230:exon | 40.0% | |
| ATGAAGATGTCAAGACCTTG+TGG | + | chr3_2:34998659-34998678 | Msa0404220:three_prime_UTR | 40.0% | |
| TAAGTTACTTGAGCACAGCA+AGG | - | chr3_2:34998689-34998708 | Msa0404230:CDS | 40.0% | |
| GTAAGTGGTAAGTTTAGCCA+TGG | + | chr3_2:34998762-34998781 | Msa0404220:three_prime_UTR | 40.0% | |
| CGAGTGATAGAAGAAACTGT+AGG | - | chr3_2:34998811-34998830 | Msa0404230:CDS | 40.0% | |
| !!! | CTGTTGGGTTTTTTGGATTC+TGG | - | chr3_2:34998837-34998856 | Msa0404230:CDS | 40.0% |
| ! | GCTTTGCTGATATTGCTGTT+GGG | - | chr3_2:34998852-34998871 | Msa0404230:CDS | 40.0% |
| ! | ATCCTTGAAAGTGGACTTGA+GGG | - | chr3_2:34998904-34998923 | Msa0404230:CDS | 40.0% |
| AATAGGAGAGGAACAACAGA+AGG | - | chr3_2:34998956-34998975 | Msa0404230:CDS | 40.0% | |
| GGCACACACTGAAATAGAAA+AGG | + | chr3_2:34999000-34999019 | Msa0404220:intron | 40.0% | |
| AGTCTCAACATTTCGATCTC+TGG | - | chr3_2:34999141-34999160 | Msa0404230:intron | 40.0% | |
| CCAGAAACCAACTTGATGTT+TGG | - | chr3_2:34999262-34999281 | Msa0404230:intron | 40.0% | |
| !! | CCAAACATCAAGTTGGTTTC+TGG | + | chr3_2:34999259-34999278 | Msa0404220:intron | 40.0% |
| GTTCAACCATTTGAACCAGA+CGG | + | chr3_2:34999281-34999300 | Msa0404220:intron | 40.0% | |
| ! | ATCAAACCGTCTGGTTCAAA+TGG | - | chr3_2:34999290-34999309 | Msa0404230:intron | 40.0% |
| AAGAACATGATCAAACCGTC+TGG | - | chr3_2:34999299-34999318 | Msa0404230:intron | 40.0% | |
| ! | AGTGGGCTCTTGAACTAAAA+GGG | - | chr3_2:34999574-34999593 | Msa0404230:CDS | 40.0% |
| ! | AAGTGGGCTCTTGAACTAAA+AGG | - | chr3_2:34999575-34999594 | Msa0404230:CDS | 40.0% |
| AACTAGGAATGAGAAAGAGC+AGG | - | chr3_2:34999677-34999696 | Msa0404230:five_prime_UTR | 40.0% | |
| AACTGAGATGCATCTCCAGA+AGG | + | chr3_2:34994959-34994978 | Msa0404220:CDS | 45.0% | |
| GAATGCGTGATTGTAGCGTT+TGG | - | chr3_2:34994995-34995014 | None:intergenic | 45.0% | |
| ACAATCACGCATTCGAGGTT+CGG | + | chr3_2:34995001-34995020 | Msa0404220:intron | 45.0% | |
| CTTCGAACCACACAAATTGC+AGG | - | chr3_2:34995052-34995071 | None:intergenic | 45.0% | |
| CACACAGGTATTCAACTGGA+TGG | + | chr3_2:34995656-34995675 | Msa0404220:intron | 45.0% | |
| CATGATCAGCTGGGTTTATG+CGG | - | chr3_2:34995698-34995717 | None:intergenic | 45.0% | |
| ACTTCAGAGCATGATCAGCT+GGG | - | chr3_2:34995707-34995726 | None:intergenic | 45.0% | |
| AACTTCAGAGCATGATCAGC+TGG | - | chr3_2:34995708-34995727 | None:intergenic | 45.0% | |
| !! | AGCTGATCATGCTCTGAAGT+TGG | + | chr3_2:34995707-34995726 | Msa0404220:CDS | 45.0% |
| ! | CGCTAAAAACTGTGGGCTAA+TGG | + | chr3_2:34995737-34995756 | Msa0404220:CDS | 45.0% |
| CTACATAGCCACGTAGAAGT+GGG | - | chr3_2:34995821-34995840 | None:intergenic | 45.0% | |
| TACGTGGCTATGTAGGAGAT+AGG | + | chr3_2:34995826-34995845 | Msa0404220:CDS | 45.0% | |
| ACGTGGCTATGTAGGAGATA+GGG | + | chr3_2:34995827-34995846 | Msa0404220:CDS | 45.0% | |
| CATGAACGTCTCAGCTTTAC+TGG | - | chr3_2:34995856-34995875 | None:intergenic | 45.0% | |
| CAGTAAAGCTGAGACGTTCA+TGG | + | chr3_2:34995854-34995873 | Msa0404220:CDS | 45.0% | |
| CATGGAGAAGCTCTATGAAC+TGG | + | chr3_2:34995872-34995891 | Msa0404220:CDS | 45.0% | |
| TGGAGAAGCTCTATGAACTG+GGG | + | chr3_2:34995874-34995893 | Msa0404220:CDS | 45.0% | |
| TACCTTTCGGTACTCACATG+TGG | - | chr3_2:34995949-34995968 | None:intergenic | 45.0% | |
| !! | GGATAACTAGGGGTACCTTT+CGG | - | chr3_2:34995962-34995981 | None:intergenic | 45.0% |
| CATCACAAGCACTCATCCAA+AGG | - | chr3_2:34996031-34996050 | None:intergenic | 45.0% | |
| TTGGATGAGTGCTTGTGATG+AGG | + | chr3_2:34996031-34996050 | Msa0404220:CDS | 45.0% | |
| TGGATGAGTGCTTGTGATGA+GGG | + | chr3_2:34996032-34996051 | Msa0404220:CDS | 45.0% | |
| !! | GCCTCTTTGAAGCAAAAGGA+GGG | + | chr3_2:34996266-34996285 | Msa0404220:CDS | 45.0% |
| ! | TCCCTCCTTTTGCTTCAAAG+AGG | - | chr3_2:34996270-34996289 | None:intergenic | 45.0% |
| ! | CTAACAAGCTTGGTGAAGCT+TGG | + | chr3_2:34996359-34996378 | Msa0404220:CDS | 45.0% |
| ! | AACAAGCTTGGTGAAGCTTG+GGG | + | chr3_2:34996361-34996380 | Msa0404220:CDS | 45.0% |
| ! | TTAGGAGCATATGTGCGGAA+TGG | + | chr3_2:34996464-34996483 | Msa0404220:CDS | 45.0% |
| CATCTCCACACATTGCAGAA+GGG | + | chr3_2:34996512-34996531 | Msa0404220:CDS | 45.0% | |
| CTGTCCAAACTACAAGACGT+GGG | + | chr3_2:34996538-34996557 | Msa0404220:CDS | 45.0% | |
| TGTTGAAAGACTGCCATTGG+AGG | + | chr3_2:34996636-34996655 | Msa0404220:CDS | 45.0% | |
| AAGGTGGTTCTTGAGCAGAA+AGG | - | chr3_2:34996802-34996821 | None:intergenic | 45.0% | |
| ! | CCCAGTGAAGCCTTTAAGAA+TGG | - | chr3_2:34996882-34996901 | None:intergenic | 45.0% |
| CTTAAAGGCTTCACTGGGTA+AGG | + | chr3_2:34996884-34996903 | Msa0404220:CDS | 45.0% | |
| ! | GTTCAAGCTGAAGTGTTTGG+AGG | + | chr3_2:34996992-34997011 | Msa0404220:three_prime_UTR | 45.0% |
| CCAGCTGAAAATGGGACAAT+TGG | - | chr3_2:34997460-34997479 | None:intergenic | 45.0% | |
| ! | CCAATTGTCCCATTTTCAGC+TGG | + | chr3_2:34997457-34997476 | Msa0404220:three_prime_UTR | 45.0% |
| ! | CTTTTCCTCCTTCAGTTGGT+TGG | - | chr3_2:34997580-34997599 | None:intergenic | 45.0% |
| GAAGGAGGAAAAGCTGCAAT+TGG | + | chr3_2:34997587-34997606 | Msa0404220:three_prime_UTR | 45.0% | |
| ATACTCTCTACGCTGTCAAG+AGG | + | chr3_2:34997820-34997839 | Msa0404220:intron | 45.0% | |
| TACTCTCTACGCTGTCAAGA+GGG | + | chr3_2:34997821-34997840 | Msa0404220:intron | 45.0% | |
| GAGCTCAGGTTCGTGTTTAT+AGG | + | chr3_2:34998464-34998483 | Msa0404220:intron | 45.0% | |
| AGATGTCAAGACCTTGTGGA+AGG | + | chr3_2:34998663-34998682 | Msa0404220:three_prime_UTR | 45.0% | |
| ! | GGCGTGCATTCTTTGATAAC+AGG | + | chr3_2:34998718-34998737 | Msa0404220:three_prime_UTR | 45.0% |
| CCTGATTGATACAGAGTCCA+TGG | - | chr3_2:34998782-34998801 | Msa0404230:CDS | 45.0% | |
| CCATGGACTCTGTATCAATC+AGG | + | chr3_2:34998779-34998798 | Msa0404220:three_prime_UTR | 45.0% | |
| GGCTTTGCTGATATTGCTGT+TGG | - | chr3_2:34998853-34998872 | Msa0404230:CDS | 45.0% | |
| ! | TTGAAAGTGGACTTGAGGGA+AGG | - | chr3_2:34998900-34998919 | Msa0404230:CDS | 45.0% |
| TTCCCTCAAGTCCACTTTCA+AGG | + | chr3_2:34998899-34998918 | Msa0404220:three_prime_UTR | 45.0% | |
| ! | GATCCTTGAAAGTGGACTTG+AGG | - | chr3_2:34998905-34998924 | Msa0404230:CDS | 45.0% |
| GGCTAAATTCGCCGATGATA+AGG | - | chr3_2:34999342-34999361 | Msa0404230:CDS | 45.0% | |
| TCCACATGATCCCTATGAGA+GGG | - | chr3_2:34999381-34999400 | Msa0404230:CDS | 45.0% | |
| TTCCACATGATCCCTATGAG+AGG | - | chr3_2:34999382-34999401 | Msa0404230:CDS | 45.0% | |
| TAGGGATCATGTGGAAGAAG+AGG | + | chr3_2:34999386-34999405 | Msa0404220:three_prime_UTR | 45.0% | |
| TTACCGTCATGCACAAGAAC+AGG | + | chr3_2:34999467-34999486 | Msa0404220:three_prime_UTR | 45.0% | |
| GTACCTGTTCTTGTGCATGA+CGG | - | chr3_2:34999473-34999492 | Msa0404230:CDS | 45.0% | |
| GTGGGCTCTTGAACTAAAAG+GGG | - | chr3_2:34999573-34999592 | Msa0404230:CDS | 45.0% | |
| ATTTGTCCTGAGGGTCAAGT+GGG | - | chr3_2:34999591-34999610 | Msa0404230:CDS | 45.0% | |
| ACTCACGTTACTAGGGTTCT+GGG | - | chr3_2:34999621-34999640 | Msa0404230:CDS | 45.0% | |
| GAGACTCACTCACGTTACTA+GGG | - | chr3_2:34999628-34999647 | Msa0404230:CDS | 45.0% | |
| ! | TCTGCCGTGAAGTGCTTCAT+CGG | + | chr3_2:34994648-34994667 | Msa0404220:five_prime_UTR | 50.0% |
| ! | TGGTTCGCCATCTGAAGCTA+CGG | - | chr3_2:34994679-34994698 | None:intergenic | 50.0% |
| GGCAATGGAGTTTGCGTTGA+AGG | - | chr3_2:34994892-34994911 | None:intergenic | 50.0% | |
| ACGCTACAATCACGCATTCG+AGG | + | chr3_2:34994996-34995015 | Msa0404220:CDS | 50.0% | |
| ATGCGTATACCTGACTCAGC+TGG | + | chr3_2:34995777-34995796 | Msa0404220:CDS | 50.0% | |
| GCTTTCTTTCCAGCTGAGTC+AGG | - | chr3_2:34995789-34995808 | None:intergenic | 50.0% | |
| ACGTAGAAGTGGGAGATAGG+CGG | - | chr3_2:34995811-34995830 | None:intergenic | 50.0% | |
| CCTACATAGCCACGTAGAAG+TGG | - | chr3_2:34995822-34995841 | None:intergenic | 50.0% | |
| CCACTTCTACGTGGCTATGT+AGG | + | chr3_2:34995819-34995838 | Msa0404220:CDS | 50.0% | |
| !! | TGCCACATGTGAGTACCGAA+AGG | + | chr3_2:34995944-34995963 | Msa0404220:CDS | 50.0% |
| TGTGATGAGGGAGAGCGATA+TGG | + | chr3_2:34996044-34996063 | Msa0404220:CDS | 50.0% | |
| GTGATGAGGGAGAGCGATAT+GGG | + | chr3_2:34996045-34996064 | Msa0404220:CDS | 50.0% | |
| TGATGAGGGAGAGCGATATG+GGG | + | chr3_2:34996046-34996065 | Msa0404220:CDS | 50.0% | |
| !! | CGCCTCTTTGAAGCAAAAGG+AGG | + | chr3_2:34996265-34996284 | Msa0404220:CDS | 50.0% |
| AGCAAAAGGAGGGAGTCTTG+CGG | + | chr3_2:34996276-34996295 | Msa0404220:CDS | 50.0% | |
| TCTTCCACCAACTGCCTTAC+TGG | - | chr3_2:34996312-34996331 | None:intergenic | 50.0% | |
| GCATCTCCACACATTGCAGA+AGG | + | chr3_2:34996511-34996530 | Msa0404220:CDS | 50.0% | |
| GCTGTCCAAACTACAAGACG+TGG | + | chr3_2:34996537-34996556 | Msa0404220:CDS | 50.0% | |
| GATGGTCACCAACCAACTGA+AGG | + | chr3_2:34997569-34997588 | Msa0404220:three_prime_UTR | 50.0% | |
| ! | GCAGCTTTTCCTCCTTCAGT+TGG | - | chr3_2:34997584-34997603 | None:intergenic | 50.0% |
| CGGCAACCTGGCAATCTAAA+TGG | - | chr3_2:34997786-34997805 | None:intergenic | 50.0% | |
| AGTCATCTAACACGGCAACC+TGG | - | chr3_2:34997798-34997817 | None:intergenic | 50.0% | |
| ! | CTCTTCAGCCTTATCCAAGG+AGG | + | chr3_2:34998167-34998186 | Msa0404220:intron | 50.0% |
| GGATGTAGCCTCCTTGGATA+AGG | - | chr3_2:34998178-34998197 | None:intergenic | 50.0% | |
| GGATAAGGATGTAGCCTCCT+TGG | - | chr3_2:34998184-34998203 | None:intergenic | 50.0% | |
| TTTAGCCCAAAATCGCGCCT+TGG | + | chr3_2:34999355-34999374 | Msa0404220:three_prime_UTR | 50.0% | |
| CATTTGTCCTGAGGGTCAAG+TGG | - | chr3_2:34999592-34999611 | Msa0404230:CDS | 50.0% | |
| CACTTGACCCTCAGGACAAA+TGG | + | chr3_2:34999590-34999609 | Msa0404220:three_prime_UTR | 50.0% | |
| GGGTAGTCCATTTGTCCTGA+GGG | - | chr3_2:34999600-34999619 | Msa0404230:CDS | 50.0% | |
| CTCACGTTACTAGGGTTCTG+GGG | - | chr3_2:34999620-34999639 | Msa0404230:CDS | 50.0% | |
| CACTCACGTTACTAGGGTTC+TGG | - | chr3_2:34999622-34999641 | Msa0404230:CDS | 50.0% | |
| GGAGACTCACTCACGTTACT+AGG | - | chr3_2:34999629-34999648 | Msa0404230:CDS | 50.0% | |
| ! | GTCGCCGATGAAGCACTTCA+CGG | - | chr3_2:34994655-34994674 | None:intergenic | 55.0% |
| GTATCACGGCGGTGAGAGAT+TGG | - | chr3_2:34994699-34994718 | None:intergenic | 55.0% | |
| CGTGTCGTACCGTCGTATCA+CGG | - | chr3_2:34994713-34994732 | None:intergenic | 55.0% | |
| GCCTATCTCCCACTTCTACG+TGG | + | chr3_2:34995810-34995829 | Msa0404220:CDS | 55.0% | |
| GCCACGTAGAAGTGGGAGAT+AGG | - | chr3_2:34995814-34995833 | None:intergenic | 55.0% | |
| GCTCTATGAACTGGGGCTAG+TGG | + | chr3_2:34995881-34995900 | Msa0404220:CDS | 55.0% | |
| TGGGAAGCCAGTAAGGCAGT+TGG | + | chr3_2:34996302-34996321 | Msa0404220:CDS | 55.0% | |
| GAAGCCAGTAAGGCAGTTGG+TGG | + | chr3_2:34996305-34996324 | Msa0404220:CDS | 55.0% | |
| CTCCACACATTGCAGAAGGG+TGG | + | chr3_2:34996515-34996534 | Msa0404220:CDS | 55.0% | |
| AGCCACCCTTCTGCAATGTG+TGG | - | chr3_2:34996520-34996539 | None:intergenic | 55.0% | |
| TTCTTTGTGGCGGCCTCCAA+TGG | - | chr3_2:34996652-34996671 | None:intergenic | 55.0% | |
| GGTCACCAACCAACTGAAGG+AGG | + | chr3_2:34997572-34997591 | Msa0404220:three_prime_UTR | 55.0% | |
| CTCTACGCTGTCAAGAGGGT+AGG | + | chr3_2:34997825-34997844 | Msa0404220:intron | 55.0% | |
| !! | CTTGAGGGAAGGCGCTACTT+TGG | - | chr3_2:34998889-34998908 | Msa0404230:CDS | 55.0% |
| TGATCCCTATGAGAGGGCCA+AGG | - | chr3_2:34999375-34999394 | Msa0404230:CDS | 55.0% | |
| GCCCTCTCATAGGGATCATG+TGG | + | chr3_2:34999377-34999396 | Msa0404220:three_prime_UTR | 55.0% | |
| GGGGTAGTCCATTTGTCCTG+AGG | - | chr3_2:34999601-34999620 | Msa0404230:CDS | 55.0% | |
| CTCTCACCGCCGTGATACGA+CGG | + | chr3_2:34994701-34994720 | Msa0404220:CDS | 60.0% | |
| GTCGTACCGTCGTATCACGG+CGG | - | chr3_2:34994710-34994729 | None:intergenic | 60.0% | |
| GCGATATGGGGTTGCAGCAG+TGG | + | chr3_2:34996058-34996077 | Msa0404220:CDS | 60.0% | |
| GCACAGCAAGGCCTTCCACA+AGG | - | chr3_2:34998677-34998696 | Msa0404230:CDS | 60.0% | |
| !! | GAGGGAAGGCGCTACTTTGG+AGG | - | chr3_2:34998886-34998905 | Msa0404230:CDS | 60.0% |
| ! | GAGGGCCAAGGCGCGATTTT+GGG | - | chr3_2:34999363-34999382 | Msa0404230:CDS | 60.0% |
| ! | AGAGGGCCAAGGCGCGATTT+TGG | - | chr3_2:34999364-34999383 | Msa0404230:CDS | 60.0% |
| CAAGAGCCCACTTGACCCTC+AGG | + | chr3_2:34999582-34999601 | Msa0404220:three_prime_UTR | 60.0% | |
| GGCGACGCCGTAGCTTCAGA+TGG | + | chr3_2:34994669-34994688 | Msa0404220:exon | 65.0% | |
| AGGAGGGAGTCTTGCGGCTG+TGG | + | chr3_2:34996282-34996301 | Msa0404220:CDS | 65.0% | |
| GGAGGGAGTCTTGCGGCTGT+GGG | + | chr3_2:34996283-34996302 | Msa0404220:CDS | 65.0% | |
| GCGGCTGTGGGAAGCCAGTA+AGG | + | chr3_2:34996295-34996314 | Msa0404220:CDS | 65.0% | |
| TCGCGCCTTGGCCCTCTCAT+AGG | + | chr3_2:34999367-34999386 | Msa0404220:three_prime_UTR | 65.0% | |
| CGCGCCTTGGCCCTCTCATA+GGG | + | chr3_2:34999368-34999387 | Msa0404220:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 34994561 | 34999710 | 34994561 | ID=Msa0404220;Name=Msa0404220 |
| chr3_2 | mRNA | 34994561 | 34999710 | 34994561 | ID=Msa0404220-mRNA-1;Parent=Msa0404220;Name=Msa0404220-mRNA-1;_AED=0.07;_eAED=0.07;_QI=127|1|1|1|0.25|0.2|5|1041|523 |
| chr3_2 | exon | 34994561 | 34995017 | 34994561 | ID=Msa0404220-mRNA-1:exon:7162;Parent=Msa0404220-mRNA-1 |
| chr3_2 | exon | 34995663 | 34997050 | 34995663 | ID=Msa0404220-mRNA-1:exon:7163;Parent=Msa0404220-mRNA-1 |
| chr3_2 | exon | 34997457 | 34997608 | 34997457 | ID=Msa0404220-mRNA-1:exon:7164;Parent=Msa0404220-mRNA-1 |
| chr3_2 | exon | 34998636 | 34999007 | 34998636 | ID=Msa0404220-mRNA-1:exon:7165;Parent=Msa0404220-mRNA-1 |
| chr3_2 | exon | 34999340 | 34999710 | 34999340 | ID=Msa0404220-mRNA-1:exon:7166;Parent=Msa0404220-mRNA-1 |
| chr3_2 | five_prime_UTR | 34994561 | 34994687 | 34994561 | ID=Msa0404220-mRNA-1:five_prime_utr;Parent=Msa0404220-mRNA-1 |
| chr3_2 | CDS | 34994688 | 34995017 | 34994688 | ID=Msa0404220-mRNA-1:cds;Parent=Msa0404220-mRNA-1 |
| chr3_2 | CDS | 34995663 | 34996904 | 34995663 | ID=Msa0404220-mRNA-1:cds;Parent=Msa0404220-mRNA-1 |
| chr3_2 | three_prime_UTR | 34996905 | 34997050 | 34996905 | ID=Msa0404220-mRNA-1:three_prime_utr;Parent=Msa0404220-mRNA-1 |
| chr3_2 | three_prime_UTR | 34997457 | 34997608 | 34997457 | ID=Msa0404220-mRNA-1:three_prime_utr;Parent=Msa0404220-mRNA-1 |
| chr3_2 | three_prime_UTR | 34998636 | 34999007 | 34998636 | ID=Msa0404220-mRNA-1:three_prime_utr;Parent=Msa0404220-mRNA-1 |
| chr3_2 | three_prime_UTR | 34999340 | 34999710 | 34999340 | ID=Msa0404220-mRNA-1:three_prime_utr;Parent=Msa0404220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
