Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431720 | XP_003603240.2 | 99.163 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431720 | sp|Q9C5Z1|EIF3B_ARATH | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431720 | G7J950 | 99.163 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1461 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0431720 | 0.800027 | 1.747079e-48 | -8.615850e-47 |
| Msa0108410 | Msa0431720 | 0.807221 | 5.618741e-50 | -8.615850e-47 |
| Msa0143560 | Msa0431720 | 0.806380 | 8.461132e-50 | -8.615850e-47 |
| Msa0225100 | Msa0431720 | 0.802468 | 5.529939e-49 | -8.615850e-47 |
| Msa0378720 | Msa0431720 | 0.810022 | 1.417007e-50 | -8.615850e-47 |
| Msa0403640 | Msa0431720 | 0.828028 | 1.128925e-54 | -8.615850e-47 |
| Msa0428580 | Msa0431720 | 0.801211 | 1.002053e-48 | -8.615850e-47 |
| Msa0431720 | Msa0479170 | 0.804564 | 2.033582e-49 | -8.615850e-47 |
| Msa0431720 | Msa0545210 | 0.806483 | 8.047316e-50 | -8.615850e-47 |
| Msa0431720 | Msa0622650 | 0.819311 | 1.241605e-52 | -8.615850e-47 |
| Msa0431720 | Msa0652450 | 0.808113 | 3.632828e-50 | -8.615850e-47 |
| Msa0431720 | Msa0737570 | 0.808376 | 3.192613e-50 | -8.615850e-47 |
| Msa0431720 | Msa0817460 | 0.800385 | 1.477756e-48 | -8.615850e-47 |
| Msa0431720 | Msa0856920 | 0.806282 | 8.874245e-50 | -8.615850e-47 |
| Msa0431720 | Msa0926470 | 0.822019 | 2.963724e-53 | -8.615850e-47 |
| Msa0431720 | Msa1034500 | 0.811419 | 7.067779e-51 | -8.615850e-47 |
| Msa0431720 | Msa1038080 | 0.809250 | 2.076068e-50 | -8.615850e-47 |
| Msa0431720 | Msa1080640 | 0.811094 | 8.313425e-51 | -8.615850e-47 |
| Msa0431720 | Msa1084950 | 0.817846 | 2.668040e-52 | -8.615850e-47 |
| Msa0431720 | Msa1085260 | 0.804576 | 2.021571e-49 | -8.615850e-47 |
| Msa0431720 | Msa1147900 | 0.807182 | 5.727288e-50 | -8.615850e-47 |
| Msa0431720 | Msa1162780 | 0.801322 | 9.510558e-49 | -8.615850e-47 |
| Msa0431720 | Msa1168660 | -0.807186 | 5.716218e-50 | -8.615850e-47 |
| Msa0431720 | Msa1199570 | 0.816395 | 5.653589e-52 | -8.615850e-47 |
| Msa0431720 | Msa1208220 | 0.806364 | 8.526934e-50 | -8.615850e-47 |
| Msa0431720 | Msa1258170 | 0.813468 | 2.520783e-51 | -8.615850e-47 |
| Msa0431720 | Msa1269890 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
| Msa0431720 | Msa1275590 | 0.809738 | 1.631195e-50 | -8.615850e-47 |
| Msa0431720 | Msa1297290 | 0.810832 | 9.473610e-51 | -8.615850e-47 |
| Msa0431720 | Msa1324080 | 0.813226 | 2.848939e-51 | -8.615850e-47 |
| Msa0431720 | Msa1328710 | 0.805288 | 1.435110e-49 | -8.615850e-47 |
| Msa0431720 | Msa1385000 | 0.810658 | 1.033020e-50 | -8.615850e-47 |
| Msa0431720 | Msa1425880 | 0.811354 | 7.303023e-51 | -8.615850e-47 |
| Msa0431720 | Msa1440310 | 0.802146 | 6.444167e-49 | -8.615850e-47 |
| Msa0244940 | Msa0431720 | 0.806827 | 6.809394e-50 | -8.615850e-47 |
| Msa0254790 | Msa0431720 | 0.810441 | 1.151028e-50 | -8.615850e-47 |
| Msa0321650 | Msa0431720 | 0.806428 | 8.266081e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431720 | MtrunA17_Chr3g0136501 | 99.163 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1461 |
| Msa0431720 | MtrunA17_Chr7g0235801 | 83.505 | 97 | 16 | 0 | 603 | 699 | 10 | 106 | 6.62e-46 | 160 |
| Msa0431720 | MtrunA17_Chr4g0045551 | 24.000 | 400 | 265 | 14 | 225 | 615 | 51 | 420 | 2.97e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0431720 | AT5G27640.3 | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| Msa0431720 | AT5G27640.1 | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| Msa0431720 | AT5G25780.1 | 76.504 | 698 | 163 | 1 | 17 | 713 | 14 | 711 | 0.0 | 1149 |
| Msa0431720 | AT5G27640.2 | 73.505 | 736 | 168 | 2 | 5 | 713 | 1 | 736 | 0.0 | 1144 |
| Msa0431720 | AT1G49015.1 | 50.885 | 226 | 91 | 5 | 311 | 535 | 3 | 209 | 7.59e-66 | 217 |
| Msa0431720 | AT1G73180.2 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.42e-24 | 107 |
| Msa0431720 | AT1G73180.1 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.60e-24 | 107 |
Find 210 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAGAAAACTACAAAAT+TGG | 0.186160 | 3_2:+83786546 | None:intergenic |
| ATTGAAGGATCACTTCTTTC+AGG | 0.197022 | 3_2:-83787325 | Msa0431720:intron |
| TCAGTTCATGAAATGGAAAA+TGG | 0.213561 | 3_2:-83787390 | Msa0431720:CDS |
| TTGCCTGAGTTCTTCTTTGC+TGG | 0.214747 | 3_2:+83788095 | None:intergenic |
| CCGTCAAGGGGCAGCAGTTT+GGG | 0.217410 | 3_2:-83788994 | Msa0431720:CDS |
| TTCAATATATATAGTTCTTA+TGG | 0.217744 | 3_2:-83787019 | Msa0431720:intron |
| CTGGAGTTTGATTCTGGATT+TGG | 0.226852 | 3_2:-83790075 | Msa0431720:CDS |
| ACATACTCACAGAAAATATA+TGG | 0.231895 | 3_2:+83789734 | None:intergenic |
| GAGAATCTGGAGTTTGATTC+TGG | 0.241775 | 3_2:-83790081 | Msa0431720:CDS |
| TTCACCTGGTGAGAAGTATT+TGG | 0.260721 | 3_2:-83788794 | Msa0431720:CDS |
| TTTGAAGGTTGAAAATATAA+TGG | 0.262529 | 3_2:-83788343 | Msa0431720:CDS |
| GAAGACAAAGCTTTGCTTCT+CGG | 0.279856 | 3_2:-83790284 | Msa0431720:CDS |
| CTCGAGGATTGCTTGGTTCA+TGG | 0.280093 | 3_2:+83788758 | None:intergenic |
| CCTGGAGCATATTCCTTGTT+TGG | 0.282373 | 3_2:+83789661 | None:intergenic |
| TGGAAAATGGATTCAATATA+TGG | 0.298256 | 3_2:-83787377 | Msa0431720:CDS |
| ACCGTCAAGGGGCAGCAGTT+TGG | 0.302732 | 3_2:-83788995 | Msa0431720:CDS |
| GTATGTCACGTTCCTTTATA+CGG | 0.318455 | 3_2:+83787950 | None:intergenic |
| CTTACAGCCCGTTTATAAAC+AGG | 0.330365 | 3_2:+83789179 | None:intergenic |
| CCCAAACTGCTGCCCCTTGA+CGG | 0.333561 | 3_2:+83788994 | None:intergenic |
| TGCCTGAGTTCTTCTTTGCT+GGG | 0.335374 | 3_2:+83788096 | None:intergenic |
| GCCCATGTTATCATGGACTA+TGG | 0.338543 | 3_2:-83786365 | Msa0431720:three_prime_UTR |
| CATAGATTTGCTGTTATTCA+TGG | 0.340404 | 3_2:-83787859 | Msa0431720:CDS |
| GTCACCTTTGGGTACTTACT+TGG | 0.345166 | 3_2:-83789027 | Msa0431720:CDS |
| ATTGCGGTGGTGAGTGATTA+TGG | 0.348784 | 3_2:+83790338 | None:intergenic |
| TCAATGGCAAACATCTTTAT+CGG | 0.350253 | 3_2:-83787350 | Msa0431720:CDS |
| GCGACAACGCTAAAGCTTTA+CGG | 0.354532 | 3_2:-83790363 | Msa0431720:five_prime_UTR |
| ACACTGCCCAACTAGCTTCT+AGG | 0.354950 | 3_2:+83786592 | None:intergenic |
| ATGCAACAGCTTCCATTCAT+TGG | 0.362435 | 3_2:+83786827 | None:intergenic |
| TTCCTCAACTTCAATGTCCT+TGG | 0.368351 | 3_2:+83786734 | None:intergenic |
| TGACATACCTATTGAAGTTC+TGG | 0.372905 | 3_2:-83787935 | Msa0431720:CDS |
| AGTCAAGAAAGAGGCTGGTC+TGG | 0.374540 | 3_2:+83786992 | None:intergenic |
| AGCCCGACCCTGTTTATAAA+CGG | 0.382245 | 3_2:-83789187 | Msa0431720:CDS |
| AGCAGGCAAATGCTTTGTTT+TGG | 0.385029 | 3_2:-83787747 | Msa0431720:CDS |
| TAGATACTAATATCAGGCTT+AGG | 0.385115 | 3_2:+83787829 | None:intergenic |
| TGGGCATGTAAAACAATAAT+CGG | 0.389804 | 3_2:+83786383 | None:intergenic |
| CTCAACTTGAAGGATCTCTT+TGG | 0.396493 | 3_2:+83786698 | None:intergenic |
| TCCTTCTACTGAAAAGTCCT+TGG | 0.402875 | 3_2:-83789923 | Msa0431720:CDS |
| TAGTTATCCTAGAAGCTAGT+TGG | 0.411219 | 3_2:-83786599 | Msa0431720:three_prime_UTR |
| AATGGATATGTCTGTGGATT+GGG | 0.412928 | 3_2:+83790609 | None:intergenic |
| AACAAGAAAACTACAAAATT+GGG | 0.422597 | 3_2:+83786547 | None:intergenic |
| AGGAACAAACAATGAAATGA+TGG | 0.426468 | 3_2:+83788296 | None:intergenic |
| TAACAGACTTGTGTCTGAAA+AGG | 0.427088 | 3_2:+83786460 | None:intergenic |
| TTAGCGTTGTCGCAGTGAAA+TGG | 0.428140 | 3_2:+83790373 | None:intergenic |
| ATAGAGTAGATACTAATATC+AGG | 0.429014 | 3_2:+83787823 | None:intergenic |
| TGTTATTCAAGAGGAGAATC+TGG | 0.430382 | 3_2:-83790094 | Msa0431720:CDS |
| TCGAGCTCCAGAACTTCAAT+AGG | 0.431350 | 3_2:+83787928 | None:intergenic |
| TCATTGTTTGTTCCTGAGAC+AGG | 0.434027 | 3_2:-83788288 | Msa0431720:CDS |
| ATAAGATCATTGCATTTGCT+TGG | 0.434886 | 3_2:-83787894 | Msa0431720:CDS |
| CTCTTTCTTGACTGCTGAGA+AGG | 0.436026 | 3_2:-83786982 | Msa0431720:CDS |
| GAAAGGTTTCAATGGACTGT+TGG | 0.438764 | 3_2:-83787689 | Msa0431720:CDS |
| GGAGGAGGAGCCCACTCGTC+TGG | 0.438943 | 3_2:+83789682 | None:intergenic |
| CTAGCATTTAAGTGCTAAGA+TGG | 0.439060 | 3_2:+83786422 | None:intergenic |
| TTTACATGCCCATGTTATCA+TGG | 0.440439 | 3_2:-83786372 | Msa0431720:three_prime_UTR |
| AATTTCTCCTTGGGAACAAC+AGG | 0.441899 | 3_2:+83790027 | None:intergenic |
| CTGGCTGTGCCGTCGGTAAA+CGG | 0.442377 | 3_2:-83790489 | Msa0431720:intron |
| ATATGTCTGTGGATTGGGCT+CGG | 0.444679 | 3_2:+83790614 | None:intergenic |
| AAGCTTCTCGAATTTCTCCT+TGG | 0.445814 | 3_2:+83790017 | None:intergenic |
| AGTTATCCTAGAAGCTAGTT+GGG | 0.448156 | 3_2:-83786598 | Msa0431720:three_prime_UTR |
| TAAGATCATTGCATTTGCTT+GGG | 0.448404 | 3_2:-83787893 | Msa0431720:CDS |
| TAGTTGTTGACGGCGGCAAT+CGG | 0.449280 | 3_2:+83790515 | None:intergenic |
| CTATTAAAGAGGATGGTCTC+TGG | 0.450216 | 3_2:-83789957 | Msa0431720:CDS |
| AGAGAGATGTACTTGAAAAC+AGG | 0.450761 | 3_2:+83788537 | None:intergenic |
| GGAGCATATTCCTTGTTTGG+AGG | 0.451980 | 3_2:+83789664 | None:intergenic |
| ACAGCAAATCTATGTCCCTT+TGG | 0.453395 | 3_2:+83787868 | None:intergenic |
| AGCTTCTCGAATTTCTCCTT+GGG | 0.454211 | 3_2:+83790018 | None:intergenic |
| GCCCGTTTATAAACAGGGTC+GGG | 0.455721 | 3_2:+83789185 | None:intergenic |
| TTCAATATATGGTCTTTCAA+TGG | 0.455846 | 3_2:-83787366 | Msa0431720:CDS |
| AACCAGCACGAATCACAAAC+TGG | 0.455853 | 3_2:+83789249 | None:intergenic |
| GAAGACTCAAGGATACAAAC+TGG | 0.456776 | 3_2:-83789764 | Msa0431720:CDS |
| TTTATGCAACTGATGTTGAA+TGG | 0.458529 | 3_2:-83787618 | Msa0431720:CDS |
| TGTAACTTCAGTTCATGAAA+TGG | 0.459413 | 3_2:-83787397 | Msa0431720:CDS |
| TGATAAGTACTTTGCAAGGA+TGG | 0.459925 | 3_2:-83788424 | Msa0431720:CDS |
| CCTTCTACTGAAAAGTCCTT+GGG | 0.460856 | 3_2:-83789922 | Msa0431720:CDS |
| TTTGTTGATTTAGGGTTTGG+AGG | 0.461123 | 3_2:+83790578 | None:intergenic |
| CCAAACAAGGAATATGCTCC+AGG | 0.464666 | 3_2:-83789661 | Msa0431720:CDS |
| GTATGTAACTGGCTAGTAGA+TGG | 0.467949 | 3_2:-83786639 | Msa0431720:three_prime_UTR |
| GCCCGACCCTGTTTATAAAC+GGG | 0.469942 | 3_2:-83789186 | Msa0431720:CDS |
| GTCAAGAAAGAGGCTGGTCT+GGG | 0.472650 | 3_2:+83786993 | None:intergenic |
| TTTGTACAATGGTCACCTTT+GGG | 0.473131 | 3_2:-83789038 | Msa0431720:CDS |
| AACAGACTTGTGTCTGAAAA+GGG | 0.474344 | 3_2:+83786461 | None:intergenic |
| AGAAGCTAGTGACGAGGAAG+AGG | 0.474421 | 3_2:-83786766 | Msa0431720:CDS |
| CATGCGTTACGCACATCCTC+AGG | 0.475971 | 3_2:-83788946 | Msa0431720:intron |
| GGAGGTACTGGAGGTGTCAC+TGG | 0.476252 | 3_2:-83788570 | Msa0431720:CDS |
| TGAAAGAAGATTGGGACAAG+TGG | 0.476327 | 3_2:-83786851 | Msa0431720:CDS |
| CAGCCAGGTTTAGTTGTTGA+CGG | 0.479174 | 3_2:+83790505 | None:intergenic |
| TGCATTTGCTTGGGAGCCAA+AGG | 0.480773 | 3_2:-83787884 | Msa0431720:CDS |
| GGTTTGGAGGCTCTTCCAAA+TGG | 0.481121 | 3_2:+83790591 | None:intergenic |
| GAGGCGACGAAGTATGTAAC+TGG | 0.482228 | 3_2:-83786650 | Msa0431720:three_prime_UTR |
| TGGCAACAGTTCACCGTCAA+GGG | 0.483837 | 3_2:-83789007 | Msa0431720:CDS |
| AAAATATAATGGATTTCAGC+TGG | 0.484915 | 3_2:-83788332 | Msa0431720:CDS |
| GAGTAGTGAGCTTTGAAACT+CGG | 0.485051 | 3_2:+83787779 | None:intergenic |
| GCTAATACTCCTCAACTTGA+AGG | 0.487202 | 3_2:+83786688 | None:intergenic |
| AAACAGAAATTTACCCTAGC+AGG | 0.488817 | 3_2:+83788252 | None:intergenic |
| GGGACAAGTGGGCCAATGAA+TGG | 0.489541 | 3_2:-83786839 | Msa0431720:CDS |
| TTATGCAACTGATGTTGAAT+GGG | 0.491113 | 3_2:-83787617 | Msa0431720:CDS |
| TGGTTACCACCTCCTGTCTC+AGG | 0.491207 | 3_2:+83788276 | None:intergenic |
| GTAGGGTCTTGAAAGAAGAT+TGG | 0.493073 | 3_2:-83786860 | Msa0431720:CDS |
| GCATATTCCTTGTTTGGAGG+AGG | 0.495988 | 3_2:+83789667 | None:intergenic |
| ATGAAGAAGAGAAGCTAGAG+AGG | 0.497330 | 3_2:-83786806 | Msa0431720:CDS |
| AGATACTAATATCAGGCTTA+GGG | 0.497798 | 3_2:+83787830 | None:intergenic |
| GACCAGTTTGTGATTCGTGC+TGG | 0.499072 | 3_2:-83789251 | Msa0431720:CDS |
| GCAGGATTGAAAGGTTTCAA+TGG | 0.500217 | 3_2:-83787697 | Msa0431720:CDS |
| AGGATTCCGCAGTTGTCACC+TGG | 0.502357 | 3_2:+83790218 | None:intergenic |
| AAATGGATATGTCTGTGGAT+TGG | 0.503467 | 3_2:+83790608 | None:intergenic |
| AATCCACAGACATATCCATT+TGG | 0.506225 | 3_2:-83790606 | Msa0431720:five_prime_UTR |
| GAGGTGGTAACCAGCCTGCT+AGG | 0.506612 | 3_2:-83788266 | Msa0431720:CDS |
| TTAGCATCTCGAGGATTGCT+TGG | 0.508363 | 3_2:+83788751 | None:intergenic |
| TAGGGTCTTGAAAGAAGATT+GGG | 0.508845 | 3_2:-83786859 | Msa0431720:CDS |
| AGCAAGAGCGTGAGAAGCGT+AGG | 0.510887 | 3_2:-83786878 | Msa0431720:CDS |
| TATGTCTGTGGATTGGGCTC+GGG | 0.511737 | 3_2:+83790615 | None:intergenic |
| GGAACAAACAATGAAATGAT+GGG | 0.513266 | 3_2:+83788297 | None:intergenic |
| GATTCCATTCACCTTCCTCC+AGG | 0.514429 | 3_2:-83790236 | Msa0431720:CDS |
| GGTCGCTTCATTGTACTAGC+AGG | 0.518685 | 3_2:-83787715 | Msa0431720:CDS |
| GATGTTGAATGGGATCCAAC+TGG | 0.519724 | 3_2:-83787607 | Msa0431720:CDS |
| CACTACTCTGAAAGGCAAGC+AGG | 0.520325 | 3_2:-83787764 | Msa0431720:CDS |
| GCCTGAGTTCTTCTTTGCTG+GGG | 0.521347 | 3_2:+83788097 | None:intergenic |
| CCGCCGTCAACAACTAAACC+TGG | 0.522577 | 3_2:-83790508 | Msa0431720:five_prime_UTR |
| CATACTCACAGAAAATATAT+GGG | 0.522843 | 3_2:+83789735 | None:intergenic |
| TCAGCAGCAATGAAACATCT+TGG | 0.522882 | 3_2:+83786904 | None:intergenic |
| GTCACCTGGAGGAAGGTGAA+TGG | 0.523301 | 3_2:+83790232 | None:intergenic |
| TTTGTTCCTGAGACAGGAGG+TGG | 0.523334 | 3_2:-83788282 | Msa0431720:CDS |
| GTGACAACTGCGGAATCCTC+AGG | 0.526265 | 3_2:-83790214 | Msa0431720:intron |
| CAAAGGAAAATCTGCAACAG+TGG | 0.528950 | 3_2:-83789295 | Msa0431720:intron |
| ATTTGGCAATATTATTGTAG+TGG | 0.528989 | 3_2:-83790058 | Msa0431720:CDS |
| ACAAAGAAAAGCACATTCAC+AGG | 0.534467 | 3_2:-83787985 | Msa0431720:CDS |
| ATCACTCACCACCGCAATCA+TGG | 0.534565 | 3_2:-83790333 | Msa0431720:exon |
| CTTCTCAGCAGTCAAGAAAG+AGG | 0.535616 | 3_2:+83786983 | None:intergenic |
| AACCATAGTCCATGATAACA+TGG | 0.536916 | 3_2:+83786363 | None:intergenic |
| CAAAGAGATCCTTCAAGTTG+AGG | 0.540194 | 3_2:-83786697 | Msa0431720:CDS |
| CGCAGTTGTCACCTGGAGGA+AGG | 0.540787 | 3_2:+83790225 | None:intergenic |
| AATGGAATCGAGATCGATAG+AGG | 0.542175 | 3_2:+83790250 | None:intergenic |
| CGTCAAGGGGCAGCAGTTTG+GGG | 0.544505 | 3_2:-83788993 | Msa0431720:CDS |
| ATTGTACTAGCAGGATTGAA+AGG | 0.547734 | 3_2:-83787706 | Msa0431720:CDS |
| TAGATAATATACCTTCCAGT+TGG | 0.547750 | 3_2:+83787592 | None:intergenic |
| TCAGCAGTCAAGAAAGAGGC+TGG | 0.549593 | 3_2:+83786987 | None:intergenic |
| CATTGAGTACAATACTCCTC+AGG | 0.551994 | 3_2:-83789890 | Msa0431720:intron |
| GCATTTGCTTGGGAGCCAAA+GGG | 0.553319 | 3_2:-83787883 | Msa0431720:CDS |
| AGCCCGTTTATAAACAGGGT+CGG | 0.555250 | 3_2:+83789184 | None:intergenic |
| AGCCAAGGACATTGAAGTTG+AGG | 0.555326 | 3_2:-83786736 | Msa0431720:CDS |
| TAATCTACCTGTTGTTCCCA+AGG | 0.563226 | 3_2:-83790034 | Msa0431720:CDS |
| AACATATTTGATGTGAGGAC+TGG | 0.564013 | 3_2:-83788639 | Msa0431720:CDS |
| TTCAGTGCAACGGAAGCGCA+AGG | 0.564465 | 3_2:+83790543 | None:intergenic |
| ACATCTTTATCGGATATTGA+AGG | 0.564648 | 3_2:-83787340 | Msa0431720:CDS |
| TTTCTTGACTGCTGAGAAGG+AGG | 0.564955 | 3_2:-83786979 | Msa0431720:CDS |
| TCAGTGACTGCAAGATGTAC+TGG | 0.566940 | 3_2:-83788056 | Msa0431720:CDS |
| AGCTAGAGAGGGAAAATCTG+AGG | 0.568066 | 3_2:-83786794 | Msa0431720:CDS |
| AGTACAATGAAGCGACCTGC+TGG | 0.569021 | 3_2:+83787721 | None:intergenic |
| AAAATGTTCAGTATTAGCCA+TGG | 0.570734 | 3_2:+83787639 | None:intergenic |
| TTGGCAACAGTTCACCGTCA+AGG | 0.571787 | 3_2:-83789008 | Msa0431720:CDS |
| TCAGATTGGTGCTATTAAAG+AGG | 0.572204 | 3_2:-83789968 | Msa0431720:CDS |
| CGTTTACCGACGGCACAGCC+AGG | 0.574861 | 3_2:+83790490 | None:intergenic |
| TTGTTTGTTCCTGAGACAGG+AGG | 0.576213 | 3_2:-83788285 | Msa0431720:CDS |
| ACTAAACCTGGCTGTGCCGT+CGG | 0.578062 | 3_2:-83790496 | Msa0431720:five_prime_UTR |
| CAGTGCAACGGAAGCGCAAG+GGG | 0.578270 | 3_2:+83790545 | None:intergenic |
| GATAAGTACTTTGCAAGGAT+GGG | 0.579491 | 3_2:-83788423 | Msa0431720:CDS |
| TCAAAGCTCACTACTCTGAA+AGG | 0.580014 | 3_2:-83787772 | Msa0431720:CDS |
| ACAGTGGCTTACTGATGCTA+AGG | 0.581144 | 3_2:-83789279 | Msa0431720:CDS |
| ATTGGTGCTATTAAAGAGGA+TGG | 0.581702 | 3_2:-83789964 | Msa0431720:CDS |
| GTAACGCATGAGACGATTGA+AGG | 0.583285 | 3_2:+83788959 | None:intergenic |
| AGAAATTTACCCTAGCAGGC+TGG | 0.583948 | 3_2:+83788256 | None:intergenic |
| CATGAAAGTGCCAGACGAGT+GGG | 0.584342 | 3_2:-83789692 | Msa0431720:CDS |
| GTGGGCTCCTCCTCCAAACA+AGG | 0.584356 | 3_2:-83789674 | Msa0431720:CDS |
| AATGAAATGATGGGATCAGT+TGG | 0.584945 | 3_2:+83788306 | None:intergenic |
| CATTACATCCGCCATGATTG+CGG | 0.586421 | 3_2:+83790322 | None:intergenic |
| TCCCCAGCAAAGAAGAACTC+AGG | 0.587881 | 3_2:-83788098 | Msa0431720:CDS |
| TGACGATGATGTTATTCAAG+AGG | 0.592706 | 3_2:-83790103 | Msa0431720:CDS |
| ATCGGTAGAGTTCAGTGCAA+CGG | 0.593909 | 3_2:+83790533 | None:intergenic |
| CAAGGGGCAGCAGTTTGGGG+AGG | 0.594258 | 3_2:-83788990 | Msa0431720:CDS |
| GAGGTGTCACTGGAGTGTCA+TGG | 0.597067 | 3_2:-83788560 | Msa0431720:CDS |
| CTTCCAAATGGATATGTCTG+TGG | 0.597999 | 3_2:+83790603 | None:intergenic |
| TCATGAAAGTGCCAGACGAG+TGG | 0.602382 | 3_2:-83789693 | Msa0431720:CDS |
| AGGTGGTAACCAGCCTGCTA+GGG | 0.602403 | 3_2:-83788265 | Msa0431720:intron |
| AAGATGATAAGTACTTTGCA+AGG | 0.602451 | 3_2:-83788428 | Msa0431720:CDS |
| TCGCCTCACTCTTGAAAACA+TGG | 0.604831 | 3_2:+83786666 | None:intergenic |
| TTTGCTATCGGAGGTACTGG+AGG | 0.604919 | 3_2:-83788579 | Msa0431720:CDS |
| GAAAGAAGATTGGGACAAGT+GGG | 0.605311 | 3_2:-83786850 | Msa0431720:CDS |
| TTTCTTTGCAGATGGAGTGG+TGG | 0.605394 | 3_2:-83788453 | Msa0431720:intron |
| GGAAGAGGAATATGAAGCCA+AGG | 0.611868 | 3_2:-83786751 | Msa0431720:CDS |
| CTTGCTAAAGAGAAGACTCA+AGG | 0.612535 | 3_2:-83789775 | Msa0431720:CDS |
| CAAACAAGGAATATGCTCCA+GGG | 0.614249 | 3_2:-83789660 | Msa0431720:CDS |
| GAGAGGGAAAATCTGAGGGA+CGG | 0.615059 | 3_2:-83786789 | Msa0431720:CDS |
| TCAGTGCAACGGAAGCGCAA+GGG | 0.616804 | 3_2:+83790544 | None:intergenic |
| TCGTGCTGGTTCAGATACTG+AGG | 0.620611 | 3_2:-83789237 | Msa0431720:CDS |
| ATGCGGACAGCTCAGAACAC+TGG | 0.622504 | 3_2:-83787802 | Msa0431720:CDS |
| AACGATCAACATTAACAGCA+AGG | 0.625990 | 3_2:+83788016 | None:intergenic |
| GTTACCAAATACTTCTCACC+AGG | 0.628866 | 3_2:+83788790 | None:intergenic |
| GCTAGAGAGGGAAAATCTGA+GGG | 0.630478 | 3_2:-83786793 | Msa0431720:CDS |
| AAGATGTACTGGCAGAGCAA+TGG | 0.630702 | 3_2:-83788045 | Msa0431720:CDS |
| GCAAGAGCGTGAGAAGCGTA+GGG | 0.638399 | 3_2:-83786877 | Msa0431720:CDS |
| GGCAACAGTTCACCGTCAAG+GGG | 0.641587 | 3_2:-83789006 | Msa0431720:CDS |
| CTCAATGAAGCAGTAACCCA+AGG | 0.644342 | 3_2:+83789906 | None:intergenic |
| TTGAATGGGATCCAACTGGA+AGG | 0.646444 | 3_2:-83787603 | Msa0431720:intron |
| ACCATAGTCCATGATAACAT+GGG | 0.654988 | 3_2:+83786364 | None:intergenic |
| TACATCCGCCATGATTGCGG+TGG | 0.656957 | 3_2:+83790325 | None:intergenic |
| AAACAAGGAATATGCTCCAG+GGG | 0.658157 | 3_2:-83789659 | Msa0431720:intron |
| TTACAGCCCGTTTATAAACA+GGG | 0.659133 | 3_2:+83789180 | None:intergenic |
| TGATAAACATATTTGATGTG+AGG | 0.659557 | 3_2:-83788644 | Msa0431720:CDS |
| TGTTGATGAGCTTGAAACCA+TGG | 0.663924 | 3_2:-83787656 | Msa0431720:CDS |
| TGAAGAAGAGAAGCTAGAGA+GGG | 0.666164 | 3_2:-83786805 | Msa0431720:CDS |
| ACACTCACATTAGCATCTCG+AGG | 0.667806 | 3_2:+83788742 | None:intergenic |
| ACGCATGAGACGATTGAAGG+TGG | 0.677518 | 3_2:+83788962 | None:intergenic |
| GGACGGAGAAGCTAGTGACG+AGG | 0.686942 | 3_2:-83786772 | Msa0431720:CDS |
| CTTCCTCCAGGTGACAACTG+CGG | 0.689197 | 3_2:-83790224 | Msa0431720:CDS |
| ATTCCGCAGTTGTCACCTGG+AGG | 0.690949 | 3_2:+83790221 | None:intergenic |
| GTTGCCAAGTAAGTACCCAA+AGG | 0.691070 | 3_2:+83789023 | None:intergenic |
| GGATTCTTACCGTTTACCGA+CGG | 0.695877 | 3_2:+83790480 | None:intergenic |
| ATATTAGTATCTACTCTATG+CGG | 0.708759 | 3_2:-83787819 | Msa0431720:CDS |
| CCAGGTTTAGTTGTTGACGG+CGG | 0.714336 | 3_2:+83790508 | None:intergenic |
| GTCTACAAAGATGAACACAA+AGG | 0.743492 | 3_2:+83786569 | None:intergenic |
| ACTCACCACCGCAATCATGG+CGG | 0.744529 | 3_2:-83790330 | Msa0431720:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTAATATCTTTTACT+TGG | - | chr3_2:83787612-83787631 | Msa0431720:CDS | 10.0% |
| !! | TAAAAAATAAAATGAAAACT+CGG | + | chr3_2:83788065-83788084 | None:intergenic | 10.0% |
| !! | TTTGGTATAAAATTAACAAA+AGG | + | chr3_2:83787410-83787429 | None:intergenic | 15.0% |
| !!! | ATTTTATACCAAAAACAAAT+AGG | - | chr3_2:83787417-83787436 | Msa0431720:intron | 15.0% |
| !!! | TATTTTTTGAATTACAGTTT+TGG | - | chr3_2:83787903-83787922 | Msa0431720:CDS | 15.0% |
| !! | AAAAAATAAAATGAAAACTC+GGG | + | chr3_2:83788064-83788083 | None:intergenic | 15.0% |
| !! | TTCAATATATATAGTTCTTA+TGG | - | chr3_2:83789954-83789973 | Msa0431720:CDS | 15.0% |
| !! | TTCAAATTTATGAGAAAAAA+GGG | + | chr3_2:83790472-83790491 | None:intergenic | 15.0% |
| !! | AATCATAAAATCTGAAAGTA+TGG | + | chr3_2:83786819-83786838 | None:intergenic | 20.0% |
| !! | AGAAAAATTTATAGTCAGAT+TGG | - | chr3_2:83786991-83787010 | Msa0431720:CDS | 20.0% |
| !!! | GTAAATAGATACTCTTTTTT+AGG | - | chr3_2:83787105-83787124 | Msa0431720:intron | 20.0% |
| !! | ATCATATTTGTAATTCTACA+AGG | + | chr3_2:83787526-83787545 | None:intergenic | 20.0% |
| !! | TGTAGAATTACAAATATGAT+TGG | - | chr3_2:83787526-83787545 | Msa0431720:intron | 20.0% |
| !!! | TGTATTATTTGATGTTTTCT+AGG | - | chr3_2:83787839-83787858 | Msa0431720:CDS | 20.0% |
| !! | TTAAGAGATTAATGATCAAA+GGG | + | chr3_2:83787866-83787885 | None:intergenic | 20.0% |
| !! | ATTAAGAGATTAATGATCAA+AGG | + | chr3_2:83787867-83787886 | None:intergenic | 20.0% |
| !! | AAAAATATGACAACCATAAA+GGG | + | chr3_2:83787890-83787909 | None:intergenic | 20.0% |
| !! | AAAAAATATGACAACCATAA+AGG | + | chr3_2:83787891-83787910 | None:intergenic | 20.0% |
| !! | AGTATATGAATATAAATCTC+AGG | - | chr3_2:83788140-83788159 | Msa0431720:intron | 20.0% |
| !! | TTTGAAGGTTGAAAATATAA+TGG | - | chr3_2:83788630-83788649 | Msa0431720:CDS | 20.0% |
| !!! | ATGGTTATAGTTTTTTTACT+TGG | - | chr3_2:83789752-83789771 | Msa0431720:CDS | 20.0% |
| !!! | TGGTTATAGTTTTTTTACTT+GGG | - | chr3_2:83789753-83789772 | Msa0431720:CDS | 20.0% |
| !!! | AAATATTGTACAGCAATTTT+TGG | + | chr3_2:83789909-83789928 | None:intergenic | 20.0% |
| !! | AACAAGAAAACTACAAAATT+GGG | + | chr3_2:83790429-83790448 | None:intergenic | 20.0% |
| !! | AAACAAGAAAACTACAAAAT+TGG | + | chr3_2:83790430-83790449 | None:intergenic | 20.0% |
| !! | GTTCAAATTTATGAGAAAAA+AGG | + | chr3_2:83790473-83790492 | None:intergenic | 20.0% |
| !!! | AACGATGTTTTGTTGATTTA+GGG | + | chr3_2:83786406-83786425 | None:intergenic | 25.0% |
| ! | AAGAGTAAATTAATGTGGAA+AGG | + | chr3_2:83786555-83786574 | None:intergenic | 25.0% |
| ! | GATAGAAGAGTAAATTAATG+TGG | + | chr3_2:83786560-83786579 | None:intergenic | 25.0% |
| ! | ATTTGGCAATATTATTGTAG+TGG | - | chr3_2:83786915-83786934 | Msa0431720:CDS | 25.0% |
| !!! | TTCAATGTTTGTTTTACCAT+CGG | - | chr3_2:83787133-83787152 | Msa0431720:intron | 25.0% |
| !!! | TAAATTGCAATGGCTATTTT+AGG | - | chr3_2:83787167-83787186 | Msa0431720:intron | 25.0% |
| ! | CATACTCACAGAAAATATAT+GGG | + | chr3_2:83787241-83787260 | None:intergenic | 25.0% |
| ! | ACATACTCACAGAAAATATA+TGG | + | chr3_2:83787242-83787261 | None:intergenic | 25.0% |
| ! | GTAGTTAGATACTTAGATTA+AGG | - | chr3_2:83787471-83787490 | Msa0431720:intron | 25.0% |
| !!! | ACAAATATGATTGGTTTACT+TGG | - | chr3_2:83787535-83787554 | Msa0431720:intron | 25.0% |
| ! | AATCACTATGTTCTTAAATC+TGG | - | chr3_2:83787575-83787594 | Msa0431720:intron | 25.0% |
| ! | TAAGAATCACTAAACATAGA+AGG | + | chr3_2:83787641-83787660 | None:intergenic | 25.0% |
| ! | CTATGTTTAGTGATTCTTAA+TGG | - | chr3_2:83787642-83787661 | Msa0431720:CDS | 25.0% |
| ! | TTAATCTCTTAATCCCTTTA+TGG | - | chr3_2:83787874-83787893 | Msa0431720:CDS | 25.0% |
| !!! | TTTTGAATTACAGTTTTGGA+CGG | - | chr3_2:83787907-83787926 | Msa0431720:CDS | 25.0% |
| ! | TGATAAACATATTTGATGTG+AGG | - | chr3_2:83788329-83788348 | Msa0431720:CDS | 25.0% |
| !! | TAAAGTGATGAGAGATTTTA+AGG | - | chr3_2:83788357-83788376 | Msa0431720:CDS | 25.0% |
| !! | AAAGTGATGAGAGATTTTAA+GGG | - | chr3_2:83788358-83788377 | Msa0431720:CDS | 25.0% |
| ! | ATGCAAATTCATCACTAAAT+TGG | + | chr3_2:83788497-83788516 | None:intergenic | 25.0% |
| !!! | AAAATATAATGGATTTCAGC+TGG | - | chr3_2:83788641-83788660 | Msa0431720:CDS | 25.0% |
| ! | TAAATAAATACATACACACG+AGG | + | chr3_2:83788808-83788827 | None:intergenic | 25.0% |
| !! | TTTTTAATCTCTGTTCTTGA+TGG | - | chr3_2:83788828-83788847 | Msa0431720:intron | 25.0% |
| ! | ATAGAGTAGATACTAATATC+AGG | + | chr3_2:83789153-83789172 | None:intergenic | 25.0% |
| ! | ATATTAGTATCTACTCTATG+CGG | - | chr3_2:83789154-83789173 | Msa0431720:intron | 25.0% |
| ! | AGTCAAACATTTAATAGCTA+CGG | + | chr3_2:83789487-83789506 | None:intergenic | 25.0% |
| ! | TGGATAACCAATATAAACAT+GGG | + | chr3_2:83789528-83789547 | None:intergenic | 25.0% |
| ! | ATGGATAACCAATATAAACA+TGG | + | chr3_2:83789529-83789548 | None:intergenic | 25.0% |
| ! | AACATACCTGTAGTATAAAA+TGG | + | chr3_2:83789548-83789567 | None:intergenic | 25.0% |
| !! | TGGAAAATGGATTCAATATA+TGG | - | chr3_2:83789596-83789615 | Msa0431720:intron | 25.0% |
| ! | TTCAATATATGGTCTTTCAA+TGG | - | chr3_2:83789607-83789626 | Msa0431720:intron | 25.0% |
| !! | ATTTTATCCGTGTATTACAA+TGG | - | chr3_2:83789695-83789714 | Msa0431720:CDS | 25.0% |
| ! | TTGGATGTACAATGTTTATA+TGG | - | chr3_2:83789733-83789752 | Msa0431720:CDS | 25.0% |
| ! | TTAGTAAAGCTACTGAAAAA+AGG | + | chr3_2:83789864-83789883 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTGATTTAGGGTT+TGG | + | chr3_2:83786401-83786420 | None:intergenic | 30.0% |
| !!! | GAACGATGTTTTGTTGATTT+AGG | + | chr3_2:83786407-83786426 | None:intergenic | 30.0% |
| !! | AGCATTGATTAATATACCTG+AGG | + | chr3_2:83786778-83786797 | None:intergenic | 30.0% |
| !! | AAAGAGTATCTATTTACCTG+AGG | + | chr3_2:83787102-83787121 | None:intergenic | 30.0% |
| TTGATGAGGTTAAATTGCAA+TGG | - | chr3_2:83787157-83787176 | Msa0431720:intron | 30.0% | |
| AACATAGTGATTGAACGTTA+GGG | + | chr3_2:83787567-83787586 | None:intergenic | 30.0% | |
| ! | ATGGTCTTTATTTCTCTCAA+AGG | - | chr3_2:83787661-83787680 | Msa0431720:CDS | 30.0% |
| !!! | AAGCTTATTGATTTTTCACC+TGG | - | chr3_2:83788165-83788184 | Msa0431720:intron | 30.0% |
| AGAGAAAGAATGTTGTAGTT+AGG | + | chr3_2:83788300-83788319 | None:intergenic | 30.0% | |
| TACAACATTCTTTCTCTAGA+GGG | - | chr3_2:83788303-83788322 | Msa0431720:CDS | 30.0% | |
| !!! | TGCATTTTTTTCTTTGCAGA+TGG | - | chr3_2:83788512-83788531 | Msa0431720:intron | 30.0% |
| AAGATGATAAGTACTTTGCA+AGG | - | chr3_2:83788545-83788564 | Msa0431720:intron | 30.0% | |
| CGTTGACAAAAAATCTTTGA+AGG | - | chr3_2:83788615-83788634 | Msa0431720:CDS | 30.0% | |
| GGAACAAACAATGAAATGAT+GGG | + | chr3_2:83788679-83788698 | None:intergenic | 30.0% | |
| AGGAACAAACAATGAAATGA+TGG | + | chr3_2:83788680-83788699 | None:intergenic | 30.0% | |
| !! | GAATGTGCTTTTCTTTGTTT+TGG | + | chr3_2:83788986-83789005 | None:intergenic | 30.0% |
| ATAAGATCATTGCATTTGCT+TGG | - | chr3_2:83789079-83789098 | Msa0431720:intron | 30.0% | |
| TAAGATCATTGCATTTGCTT+GGG | - | chr3_2:83789080-83789099 | Msa0431720:intron | 30.0% | |
| !! | CATAGATTTGCTGTTATTCA+TGG | - | chr3_2:83789114-83789133 | Msa0431720:intron | 30.0% |
| AGATACTAATATCAGGCTTA+GGG | + | chr3_2:83789146-83789165 | None:intergenic | 30.0% | |
| TAGATACTAATATCAGGCTT+AGG | + | chr3_2:83789147-83789166 | None:intergenic | 30.0% | |
| AAAATGTTCAGTATTAGCCA+TGG | + | chr3_2:83789337-83789356 | None:intergenic | 30.0% | |
| TTTATGCAACTGATGTTGAA+TGG | - | chr3_2:83789355-83789374 | Msa0431720:intron | 30.0% | |
| TTATGCAACTGATGTTGAAT+GGG | - | chr3_2:83789356-83789375 | Msa0431720:intron | 30.0% | |
| TAGATAATATACCTTCCAGT+TGG | + | chr3_2:83789384-83789403 | None:intergenic | 30.0% | |
| AAGCAATATCAACACACATT+TGG | + | chr3_2:83789408-83789427 | None:intergenic | 30.0% | |
| GGATAACCAATATAAACATG+GGG | + | chr3_2:83789527-83789546 | None:intergenic | 30.0% | |
| ! | GGTTATCCATTTTATACTAC+AGG | - | chr3_2:83789539-83789558 | Msa0431720:intron | 30.0% |
| TGTAACTTCAGTTCATGAAA+TGG | - | chr3_2:83789576-83789595 | Msa0431720:intron | 30.0% | |
| TCAGTTCATGAAATGGAAAA+TGG | - | chr3_2:83789583-83789602 | Msa0431720:intron | 30.0% | |
| TCAATGGCAAACATCTTTAT+CGG | - | chr3_2:83789623-83789642 | Msa0431720:intron | 30.0% | |
| ACATCTTTATCGGATATTGA+AGG | - | chr3_2:83789633-83789652 | Msa0431720:intron | 30.0% | |
| TACATCCAAAAGTCATTCTT+TGG | + | chr3_2:83789722-83789741 | None:intergenic | 30.0% | |
| ! | AAAACTTTTACAGCCAACAA+TGG | + | chr3_2:83789788-83789807 | None:intergenic | 30.0% |
| !! | AAAAAGGCTTTTGGAAACAA+GGG | + | chr3_2:83789848-83789867 | None:intergenic | 30.0% |
| !! | AAAAAAGGCTTTTGGAAACA+AGG | + | chr3_2:83789849-83789868 | None:intergenic | 30.0% |
| !!! | TACAGCAATTTTTGGTTTGT+GGG | + | chr3_2:83789901-83789920 | None:intergenic | 30.0% |
| TGGGCATGTAAAACAATAAT+CGG | + | chr3_2:83790593-83790612 | None:intergenic | 30.0% | |
| AATGGATATGTCTGTGGATT+GGG | + | chr3_2:83786367-83786386 | None:intergenic | 35.0% | |
| AAATGGATATGTCTGTGGAT+TGG | + | chr3_2:83786368-83786387 | None:intergenic | 35.0% | |
| AATCCACAGACATATCCATT+TGG | - | chr3_2:83786367-83786386 | Msa0431720:three_prime_UTR | 35.0% | |
| !! | TTTGTTGATTTAGGGTTTGG+AGG | + | chr3_2:83786398-83786417 | None:intergenic | 35.0% |
| GATGAAGAGAAGAGAATCTA+GGG | + | chr3_2:83786517-83786536 | None:intergenic | 35.0% | |
| AGATGAAGAGAAGAGAATCT+AGG | + | chr3_2:83786518-83786537 | None:intergenic | 35.0% | |
| TGACGATGATGTTATTCAAG+AGG | - | chr3_2:83786870-83786889 | Msa0431720:CDS | 35.0% | |
| TGTTATTCAAGAGGAGAATC+TGG | - | chr3_2:83786879-83786898 | Msa0431720:CDS | 35.0% | |
| !! | TCAGATTGGTGCTATTAAAG+AGG | - | chr3_2:83787005-83787024 | Msa0431720:CDS | 35.0% |
| !! | ATTGGTGCTATTAAAGAGGA+TGG | - | chr3_2:83787009-83787028 | Msa0431720:intron | 35.0% |
| ! | TTTTCAGTAGAAGGATCAAC+AGG | + | chr3_2:83787045-83787064 | None:intergenic | 35.0% |
| ATTTAACCTCATCAAACCGA+TGG | + | chr3_2:83787152-83787171 | None:intergenic | 35.0% | |
| AGAGATATAATCATTACCCC+TGG | + | chr3_2:83787333-83787352 | None:intergenic | 35.0% | |
| ! | TCATTTGAGACCACCATATT+AGG | - | chr3_2:83787373-83787392 | Msa0431720:CDS | 35.0% |
| AGACCACCATATTAGGATTA+TGG | - | chr3_2:83787380-83787399 | Msa0431720:CDS | 35.0% | |
| GACCACCATATTAGGATTAT+GGG | - | chr3_2:83787381-83787400 | Msa0431720:CDS | 35.0% | |
| !! | AAGTGGTGCCTATTTGTTTT+TGG | + | chr3_2:83787428-83787447 | None:intergenic | 35.0% |
| ! | GGCAATTTCATGTTTTCTCA+TGG | - | chr3_2:83787492-83787511 | Msa0431720:intron | 35.0% |
| TTGTAATTCTACAAGGAGTG+TGG | + | chr3_2:83787519-83787538 | None:intergenic | 35.0% | |
| GAACATAGTGATTGAACGTT+AGG | + | chr3_2:83787568-83787587 | None:intergenic | 35.0% | |
| TTACAGCCCGTTTATAAACA+GGG | + | chr3_2:83787796-83787815 | None:intergenic | 35.0% | |
| ! | TTTTGTACAATGGTCACCTT+TGG | - | chr3_2:83787934-83787953 | Msa0431720:CDS | 35.0% |
| TTTGTACAATGGTCACCTTT+GGG | - | chr3_2:83787935-83787954 | Msa0431720:CDS | 35.0% | |
| TCGGGAAAAAAAAAAACCTG+AGG | + | chr3_2:83788046-83788065 | None:intergenic | 35.0% | |
| GTTTCACGAAAAGCTCAAAA+TGG | + | chr3_2:83788273-83788292 | None:intergenic | 35.0% | |
| CTACAACATTCTTTCTCTAG+AGG | - | chr3_2:83788302-83788321 | Msa0431720:CDS | 35.0% | |
| AACATATTTGATGTGAGGAC+TGG | - | chr3_2:83788334-83788353 | Msa0431720:CDS | 35.0% | |
| !!! | AGTGCTGATGATTTTGCTAT+CGG | - | chr3_2:83788382-83788401 | Msa0431720:CDS | 35.0% |
| AGAGAGATGTACTTGAAAAC+AGG | + | chr3_2:83788439-83788458 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTTTGCAGATGGAG+TGG | - | chr3_2:83788517-83788536 | Msa0431720:intron | 35.0% |
| TGATAAGTACTTTGCAAGGA+TGG | - | chr3_2:83788549-83788568 | Msa0431720:CDS | 35.0% | |
| GATAAGTACTTTGCAAGGAT+GGG | - | chr3_2:83788550-83788569 | Msa0431720:CDS | 35.0% | |
| ! | AATGAAATGATGGGATCAGT+TGG | + | chr3_2:83788670-83788689 | None:intergenic | 35.0% |
| AAACAGAAATTTACCCTAGC+AGG | + | chr3_2:83788724-83788743 | None:intergenic | 35.0% | |
| CATTACACATGACCATAGAA+GGG | + | chr3_2:83788752-83788771 | None:intergenic | 35.0% | |
| !! | TCTGTTCTTGATGGATTTGT+AGG | - | chr3_2:83788837-83788856 | Msa0431720:intron | 35.0% |
| AACGATCAACATTAACAGCA+AGG | + | chr3_2:83788960-83788979 | None:intergenic | 35.0% | |
| ! | ACAAAGAAAAGCACATTCAC+AGG | - | chr3_2:83788988-83789007 | Msa0431720:CDS | 35.0% |
| ! | CTTTGAGCTTTTCCGTATAA+AGG | - | chr3_2:83789011-83789030 | Msa0431720:CDS | 35.0% |
| GTATGTCACGTTCCTTTATA+CGG | + | chr3_2:83789026-83789045 | None:intergenic | 35.0% | |
| TGACATACCTATTGAAGTTC+TGG | - | chr3_2:83789038-83789057 | Msa0431720:CDS | 35.0% | |
| ATTGTACTAGCAGGATTGAA+AGG | - | chr3_2:83789267-83789286 | Msa0431720:CDS | 35.0% | |
| ! | TGTGTTGATATTGCTTACCA+AGG | - | chr3_2:83789412-83789431 | Msa0431720:intron | 35.0% |
| TTATCCATGATCTTCAACCT+TGG | + | chr3_2:83789432-83789451 | None:intergenic | 35.0% | |
| ACTGATCCCCATGTTTATAT+TGG | - | chr3_2:83789518-83789537 | Msa0431720:intron | 35.0% | |
| ATTGAAGGATCACTTCTTTC+AGG | - | chr3_2:83789648-83789667 | Msa0431720:intron | 35.0% | |
| CTTTGGACCATTGTAATACA+CGG | + | chr3_2:83789705-83789724 | None:intergenic | 35.0% | |
| ! | ATGGTCCAAAGAATGACTTT+TGG | - | chr3_2:83789714-83789733 | Msa0431720:CDS | 35.0% |
| ! | AGCTACTGAAAAAAGGCTTT+TGG | + | chr3_2:83789857-83789876 | None:intergenic | 35.0% |
| !!! | GTACAGCAATTTTTGGTTTG+TGG | + | chr3_2:83789902-83789921 | None:intergenic | 35.0% |
| TAGGGTCTTGAAAGAAGATT+GGG | - | chr3_2:83790114-83790133 | Msa0431720:intron | 35.0% | |
| TAGTTATCCTAGAAGCTAGT+TGG | - | chr3_2:83790374-83790393 | Msa0431720:five_prime_UTR | 35.0% | |
| AGTTATCCTAGAAGCTAGTT+GGG | - | chr3_2:83790375-83790394 | Msa0431720:five_prime_UTR | 35.0% | |
| GTCTACAAAGATGAACACAA+AGG | + | chr3_2:83790407-83790426 | None:intergenic | 35.0% | |
| AACAGACTTGTGTCTGAAAA+GGG | + | chr3_2:83790515-83790534 | None:intergenic | 35.0% | |
| TAACAGACTTGTGTCTGAAA+AGG | + | chr3_2:83790516-83790535 | None:intergenic | 35.0% | |
| CTAGCATTTAAGTGCTAAGA+TGG | + | chr3_2:83790554-83790573 | None:intergenic | 35.0% | |
| TTTACATGCCCATGTTATCA+TGG | - | chr3_2:83790601-83790620 | Msa0431720:five_prime_UTR | 35.0% | |
| ACCATAGTCCATGATAACAT+GGG | + | chr3_2:83790612-83790631 | None:intergenic | 35.0% | |
| AACCATAGTCCATGATAACA+TGG | + | chr3_2:83790613-83790632 | None:intergenic | 35.0% | |
| CTTCCAAATGGATATGTCTG+TGG | + | chr3_2:83786373-83786392 | None:intergenic | 40.0% | |
| GAAGACAAAGCTTTGCTTCT+CGG | - | chr3_2:83786689-83786708 | Msa0431720:CDS | 40.0% | |
| AATGGAATCGAGATCGATAG+AGG | + | chr3_2:83786726-83786745 | None:intergenic | 40.0% | |
| CATCGTCATCACTACATACA+TGG | + | chr3_2:83786858-83786877 | None:intergenic | 40.0% | |
| ! | GAGAATCTGGAGTTTGATTC+TGG | - | chr3_2:83786892-83786911 | Msa0431720:CDS | 40.0% |
| CTGGAGTTTGATTCTGGATT+TGG | - | chr3_2:83786898-83786917 | Msa0431720:CDS | 40.0% | |
| TAATCTACCTGTTGTTCCCA+AGG | - | chr3_2:83786939-83786958 | Msa0431720:CDS | 40.0% | |
| AATTTCTCCTTGGGAACAAC+AGG | + | chr3_2:83786949-83786968 | None:intergenic | 40.0% | |
| AGCTTCTCGAATTTCTCCTT+GGG | + | chr3_2:83786958-83786977 | None:intergenic | 40.0% | |
| AAGCTTCTCGAATTTCTCCT+TGG | + | chr3_2:83786959-83786978 | None:intergenic | 40.0% | |
| CTATTAAAGAGGATGGTCTC+TGG | - | chr3_2:83787016-83787035 | Msa0431720:intron | 40.0% | |
| TCCTTCTACTGAAAAGTCCT+TGG | - | chr3_2:83787050-83787069 | Msa0431720:intron | 40.0% | |
| CCTTCTACTGAAAAGTCCTT+GGG | - | chr3_2:83787051-83787070 | Msa0431720:intron | 40.0% | |
| CATTGAGTACAATACTCCTC+AGG | - | chr3_2:83787083-83787102 | Msa0431720:intron | 40.0% | |
| !!! | GTTTTACCATCGGTTTGATG+AGG | - | chr3_2:83787143-83787162 | Msa0431720:intron | 40.0% |
| CTTGCTAAAGAGAAGACTCA+AGG | - | chr3_2:83787198-83787217 | Msa0431720:intron | 40.0% | |
| GAAGACTCAAGGATACAAAC+TGG | - | chr3_2:83787209-83787228 | Msa0431720:intron | 40.0% | |
| CAAACAAGGAATATGCTCCA+GGG | - | chr3_2:83787313-83787332 | Msa0431720:intron | 40.0% | |
| AAACAAGGAATATGCTCCAG+GGG | - | chr3_2:83787314-83787333 | Msa0431720:intron | 40.0% | |
| CTCCCATAATCCTAATATGG+TGG | + | chr3_2:83787386-83787405 | None:intergenic | 40.0% | |
| GGTCTCCCATAATCCTAATA+TGG | + | chr3_2:83787389-83787408 | None:intergenic | 40.0% | |
| CAAAGGAAAATCTGCAACAG+TGG | - | chr3_2:83787678-83787697 | Msa0431720:CDS | 40.0% | |
| ! | GTTCAGATACTGAGGTTTTG+TGG | - | chr3_2:83787744-83787763 | Msa0431720:CDS | 40.0% |
| CTTACAGCCCGTTTATAAAC+AGG | + | chr3_2:83787797-83787816 | None:intergenic | 40.0% | |
| !! | TTCACCTGGTGAGAAGTATT+TGG | - | chr3_2:83788179-83788198 | Msa0431720:intron | 40.0% |
| GTTACCAAATACTTCTCACC+AGG | + | chr3_2:83788186-83788205 | None:intergenic | 40.0% | |
| TCATTGTTTGTTCCTGAGAC+AGG | - | chr3_2:83788685-83788704 | Msa0431720:intron | 40.0% | |
| ! | TCTGTTTTCCTTCCCTTCTA+TGG | - | chr3_2:83788737-83788756 | Msa0431720:intron | 40.0% |
| CCATTACACATGACCATAGA+AGG | + | chr3_2:83788753-83788772 | None:intergenic | 40.0% | |
| CCTTCTATGGTCATGTGTAA+TGG | - | chr3_2:83788750-83788769 | Msa0431720:CDS | 40.0% | |
| ACAGCAAATCTATGTCCCTT+TGG | + | chr3_2:83789108-83789127 | None:intergenic | 40.0% | |
| !! | GAGTAGTGAGCTTTGAAACT+CGG | + | chr3_2:83789197-83789216 | None:intergenic | 40.0% |
| TCAAAGCTCACTACTCTGAA+AGG | - | chr3_2:83789201-83789220 | Msa0431720:CDS | 40.0% | |
| !!! | AGCAGGCAAATGCTTTGTTT+TGG | - | chr3_2:83789226-83789245 | Msa0431720:CDS | 40.0% |
| GCAGGATTGAAAGGTTTCAA+TGG | - | chr3_2:83789276-83789295 | Msa0431720:CDS | 40.0% | |
| !! | GAAAGGTTTCAATGGACTGT+TGG | - | chr3_2:83789284-83789303 | Msa0431720:CDS | 40.0% |
| ! | TGTTGATGAGCTTGAAACCA+TGG | - | chr3_2:83789317-83789336 | Msa0431720:intron | 40.0% |
| CTTACCAAGGTTGAAGATCA+TGG | - | chr3_2:83789425-83789444 | Msa0431720:intron | 40.0% | |
| TGGGATTGTGAATCCATTGT+TGG | - | chr3_2:83789772-83789791 | Msa0431720:CDS | 40.0% | |
| TCAGCAGCAATGAAACATCT+TGG | + | chr3_2:83790072-83790091 | None:intergenic | 40.0% | |
| GTAGGGTCTTGAAAGAAGAT+TGG | - | chr3_2:83790113-83790132 | Msa0431720:intron | 40.0% | |
| TGAAAGAAGATTGGGACAAG+TGG | - | chr3_2:83790122-83790141 | Msa0431720:intron | 40.0% | |
| GAAAGAAGATTGGGACAAGT+GGG | - | chr3_2:83790123-83790142 | Msa0431720:intron | 40.0% | |
| ATGCAACAGCTTCCATTCAT+TGG | + | chr3_2:83790149-83790168 | None:intergenic | 40.0% | |
| ATGAAGAAGAGAAGCTAGAG+AGG | - | chr3_2:83790167-83790186 | Msa0431720:intron | 40.0% | |
| TGAAGAAGAGAAGCTAGAGA+GGG | - | chr3_2:83790168-83790187 | Msa0431720:intron | 40.0% | |
| TTCCTCAACTTCAATGTCCT+TGG | + | chr3_2:83790242-83790261 | None:intergenic | 40.0% | |
| CTCAACTTGAAGGATCTCTT+TGG | + | chr3_2:83790278-83790297 | None:intergenic | 40.0% | |
| !! | CAAAGAGATCCTTCAAGTTG+AGG | - | chr3_2:83790276-83790295 | Msa0431720:CDS | 40.0% |
| GCTAATACTCCTCAACTTGA+AGG | + | chr3_2:83790288-83790307 | None:intergenic | 40.0% | |
| !! | TAGCCATGTTTTCAAGAGTG+AGG | - | chr3_2:83790304-83790323 | Msa0431720:CDS | 40.0% |
| GTATGTAACTGGCTAGTAGA+TGG | - | chr3_2:83790334-83790353 | Msa0431720:exon | 40.0% | |
| !! | ATATGTCTGTGGATTGGGCT+CGG | + | chr3_2:83786362-83786381 | None:intergenic | 45.0% |
| ATCGGTAGAGTTCAGTGCAA+CGG | + | chr3_2:83786443-83786462 | None:intergenic | 45.0% | |
| CAGCCAGGTTTAGTTGTTGA+CGG | + | chr3_2:83786471-83786490 | None:intergenic | 45.0% | |
| GGATTCTTACCGTTTACCGA+CGG | + | chr3_2:83786496-83786515 | None:intergenic | 45.0% | |
| TTAGCGTTGTCGCAGTGAAA+TGG | + | chr3_2:83786603-83786622 | None:intergenic | 45.0% | |
| GCGACAACGCTAAAGCTTTA+CGG | - | chr3_2:83786610-83786629 | Msa0431720:three_prime_UTR | 45.0% | |
| ATTGCGGTGGTGAGTGATTA+TGG | + | chr3_2:83786638-83786657 | None:intergenic | 45.0% | |
| CATTACATCCGCCATGATTG+CGG | + | chr3_2:83786654-83786673 | None:intergenic | 45.0% | |
| ! | CCCAAGGACTTTTCAGTAGA+AGG | + | chr3_2:83787054-83787073 | None:intergenic | 45.0% |
| CTCAATGAAGCAGTAACCCA+AGG | + | chr3_2:83787070-83787089 | None:intergenic | 45.0% | |
| ! | GCATATTCCTTGTTTGGAGG+AGG | + | chr3_2:83787309-83787328 | None:intergenic | 45.0% |
| ! | GGAGCATATTCCTTGTTTGG+AGG | + | chr3_2:83787312-83787331 | None:intergenic | 45.0% |
| CCTGGAGCATATTCCTTGTT+TGG | + | chr3_2:83787315-83787334 | None:intergenic | 45.0% | |
| CCAAACAAGGAATATGCTCC+AGG | - | chr3_2:83787312-83787331 | Msa0431720:intron | 45.0% | |
| ACAGTGGCTTACTGATGCTA+AGG | - | chr3_2:83787694-83787713 | Msa0431720:CDS | 45.0% | |
| AACCAGCACGAATCACAAAC+TGG | + | chr3_2:83787727-83787746 | None:intergenic | 45.0% | |
| AGCCCGACCCTGTTTATAAA+CGG | - | chr3_2:83787786-83787805 | Msa0431720:CDS | 45.0% | |
| AGCCCGTTTATAAACAGGGT+CGG | + | chr3_2:83787792-83787811 | None:intergenic | 45.0% | |
| !! | GGACGGAGAGTTTTGTACAA+TGG | - | chr3_2:83787924-83787943 | Msa0431720:CDS | 45.0% |
| GTCACCTTTGGGTACTTACT+TGG | - | chr3_2:83787946-83787965 | Msa0431720:CDS | 45.0% | |
| GTTGCCAAGTAAGTACCCAA+AGG | + | chr3_2:83787953-83787972 | None:intergenic | 45.0% | |
| GTAACGCATGAGACGATTGA+AGG | + | chr3_2:83788017-83788036 | None:intergenic | 45.0% | |
| TTAGCATCTCGAGGATTGCT+TGG | + | chr3_2:83788225-83788244 | None:intergenic | 45.0% | |
| ACACTCACATTAGCATCTCG+AGG | + | chr3_2:83788234-83788253 | None:intergenic | 45.0% | |
| !! | GCTGATGATTTTGCTATCGG+AGG | - | chr3_2:83788385-83788404 | Msa0431720:CDS | 45.0% |
| !! | GATTTTGCTATCGGAGGTAC+TGG | - | chr3_2:83788391-83788410 | Msa0431720:CDS | 45.0% |
| TTTCTTTGCAGATGGAGTGG+TGG | - | chr3_2:83788520-83788539 | Msa0431720:intron | 45.0% | |
| TTGTTTGTTCCTGAGACAGG+AGG | - | chr3_2:83788688-83788707 | Msa0431720:intron | 45.0% | |
| AGAAATTTACCCTAGCAGGC+TGG | + | chr3_2:83788720-83788739 | None:intergenic | 45.0% | |
| ACACATGACCATAGAAGGGA+AGG | + | chr3_2:83788748-83788767 | None:intergenic | 45.0% | |
| TGCCTGAGTTCTTCTTTGCT+GGG | + | chr3_2:83788880-83788899 | None:intergenic | 45.0% | |
| TTGCCTGAGTTCTTCTTTGC+TGG | + | chr3_2:83788881-83788900 | None:intergenic | 45.0% | |
| TCAGTGACTGCAAGATGTAC+TGG | - | chr3_2:83788917-83788936 | Msa0431720:intron | 45.0% | |
| ! | AAGATGTACTGGCAGAGCAA+TGG | - | chr3_2:83788928-83788947 | Msa0431720:intron | 45.0% |
| TCGAGCTCCAGAACTTCAAT+AGG | + | chr3_2:83789048-83789067 | None:intergenic | 45.0% | |
| GATGTTGAATGGGATCCAAC+TGG | - | chr3_2:83789366-83789385 | Msa0431720:intron | 45.0% | |
| TTGAATGGGATCCAACTGGA+AGG | - | chr3_2:83789370-83789389 | Msa0431720:intron | 45.0% | |
| CTTCTCAGCAGTCAAGAAAG+AGG | + | chr3_2:83789993-83790012 | None:intergenic | 45.0% | |
| CTCTTTCTTGACTGCTGAGA+AGG | - | chr3_2:83789991-83790010 | Msa0431720:CDS | 45.0% | |
| TTTCTTGACTGCTGAGAAGG+AGG | - | chr3_2:83789994-83790013 | Msa0431720:CDS | 45.0% | |
| AGCTAGAGAGGGAAAATCTG+AGG | - | chr3_2:83790179-83790198 | Msa0431720:intron | 45.0% | |
| GCTAGAGAGGGAAAATCTGA+GGG | - | chr3_2:83790180-83790199 | Msa0431720:intron | 45.0% | |
| GGAAGAGGAATATGAAGCCA+AGG | - | chr3_2:83790222-83790241 | Msa0431720:CDS | 45.0% | |
| AGCCAAGGACATTGAAGTTG+AGG | - | chr3_2:83790237-83790256 | Msa0431720:CDS | 45.0% | |
| TCGCCTCACTCTTGAAAACA+TGG | + | chr3_2:83790310-83790329 | None:intergenic | 45.0% | |
| ! | GCCCATGTTATCATGGACTA+TGG | - | chr3_2:83790608-83790627 | Msa0431720:five_prime_UTR | 45.0% |
| GGTTTGGAGGCTCTTCCAAA+TGG | + | chr3_2:83786385-83786404 | None:intergenic | 50.0% | |
| TAGTTGTTGACGGCGGCAAT+CGG | + | chr3_2:83786461-83786480 | None:intergenic | 50.0% | |
| CCAGGTTTAGTTGTTGACGG+CGG | + | chr3_2:83786468-83786487 | None:intergenic | 50.0% | |
| ATCACTCACCACCGCAATCA+TGG | - | chr3_2:83786640-83786659 | Msa0431720:three_prime_UTR | 50.0% | |
| GATTCCATTCACCTTCCTCC+AGG | - | chr3_2:83786737-83786756 | Msa0431720:CDS | 50.0% | |
| !! | TCATGAAAGTGCCAGACGAG+TGG | - | chr3_2:83787280-83787299 | Msa0431720:intron | 50.0% |
| !! | CATGAAAGTGCCAGACGAGT+GGG | - | chr3_2:83787281-83787300 | Msa0431720:intron | 50.0% |
| ACAACCAAGTAGCACGCAAG+TGG | + | chr3_2:83787445-83787464 | None:intergenic | 50.0% | |
| GACCAGTTTGTGATTCGTGC+TGG | - | chr3_2:83787722-83787741 | Msa0431720:CDS | 50.0% | |
| !! | TCGTGCTGGTTCAGATACTG+AGG | - | chr3_2:83787736-83787755 | Msa0431720:CDS | 50.0% |
| GCCCGACCCTGTTTATAAAC+GGG | - | chr3_2:83787787-83787806 | Msa0431720:CDS | 50.0% | |
| GCCCGTTTATAAACAGGGTC+GGG | + | chr3_2:83787791-83787810 | None:intergenic | 50.0% | |
| TTGGCAACAGTTCACCGTCA+AGG | - | chr3_2:83787965-83787984 | Msa0431720:CDS | 50.0% | |
| TGGCAACAGTTCACCGTCAA+GGG | - | chr3_2:83787966-83787985 | Msa0431720:CDS | 50.0% | |
| ACGCATGAGACGATTGAAGG+TGG | + | chr3_2:83788014-83788033 | None:intergenic | 50.0% | |
| CTCGAGGATTGCTTGGTTCA+TGG | + | chr3_2:83788218-83788237 | None:intergenic | 50.0% | |
| !! | TTTGCTATCGGAGGTACTGG+AGG | - | chr3_2:83788394-83788413 | Msa0431720:CDS | 50.0% |
| TTTGTTCCTGAGACAGGAGG+TGG | - | chr3_2:83788691-83788710 | Msa0431720:intron | 50.0% | |
| TCCCCAGCAAAGAAGAACTC+AGG | - | chr3_2:83788875-83788894 | Msa0431720:intron | 50.0% | |
| GCCTGAGTTCTTCTTTGCTG+GGG | + | chr3_2:83788879-83788898 | None:intergenic | 50.0% | |
| TGCATTTGCTTGGGAGCCAA+AGG | - | chr3_2:83789089-83789108 | Msa0431720:intron | 50.0% | |
| GCATTTGCTTGGGAGCCAAA+GGG | - | chr3_2:83789090-83789109 | Msa0431720:intron | 50.0% | |
| ! | CACTACTCTGAAAGGCAAGC+AGG | - | chr3_2:83789209-83789228 | Msa0431720:CDS | 50.0% |
| !!! | GCTTTGTTTTGGTCACCAGC+AGG | - | chr3_2:83789237-83789256 | Msa0431720:CDS | 50.0% |
| AGTACAATGAAGCGACCTGC+TGG | + | chr3_2:83789255-83789274 | None:intergenic | 50.0% | |
| GGTCGCTTCATTGTACTAGC+AGG | - | chr3_2:83789258-83789277 | Msa0431720:CDS | 50.0% | |
| !! | GTCAAGAAAGAGGCTGGTCT+GGG | + | chr3_2:83789983-83790002 | None:intergenic | 50.0% |
| ! | AGTCAAGAAAGAGGCTGGTC+TGG | + | chr3_2:83789984-83790003 | None:intergenic | 50.0% |
| TCAGCAGTCAAGAAAGAGGC+TGG | + | chr3_2:83789989-83790008 | None:intergenic | 50.0% | |
| GAGAGGGAAAATCTGAGGGA+CGG | - | chr3_2:83790184-83790203 | Msa0431720:intron | 50.0% | |
| AGAAGCTAGTGACGAGGAAG+AGG | - | chr3_2:83790207-83790226 | Msa0431720:intron | 50.0% | |
| GAGGCGACGAAGTATGTAAC+TGG | - | chr3_2:83790323-83790342 | Msa0431720:exon | 50.0% | |
| ! | ACACTGCCCAACTAGCTTCT+AGG | + | chr3_2:83790384-83790403 | None:intergenic | 50.0% |
| ! | TCAGTGCAACGGAAGCGCAA+GGG | + | chr3_2:83786432-83786451 | None:intergenic | 55.0% |
| ! | TTCAGTGCAACGGAAGCGCA+AGG | + | chr3_2:83786433-83786452 | None:intergenic | 55.0% |
| CCGCCGTCAACAACTAAACC+TGG | - | chr3_2:83786465-83786484 | Msa0431720:three_prime_UTR | 55.0% | |
| ACTAAACCTGGCTGTGCCGT+CGG | - | chr3_2:83786477-83786496 | Msa0431720:three_prime_UTR | 55.0% | |
| ACTCACCACCGCAATCATGG+CGG | - | chr3_2:83786643-83786662 | Msa0431720:three_prime_UTR | 55.0% | |
| TACATCCGCCATGATTGCGG+TGG | + | chr3_2:83786651-83786670 | None:intergenic | 55.0% | |
| GTCACCTGGAGGAAGGTGAA+TGG | + | chr3_2:83786744-83786763 | None:intergenic | 55.0% | |
| CTTCCTCCAGGTGACAACTG+CGG | - | chr3_2:83786749-83786768 | Msa0431720:CDS | 55.0% | |
| ATTCCGCAGTTGTCACCTGG+AGG | + | chr3_2:83786755-83786774 | None:intergenic | 55.0% | |
| AGGATTCCGCAGTTGTCACC+TGG | + | chr3_2:83786758-83786777 | None:intergenic | 55.0% | |
| GTGACAACTGCGGAATCCTC+AGG | - | chr3_2:83786759-83786778 | Msa0431720:CDS | 55.0% | |
| GGCAACAGTTCACCGTCAAG+GGG | - | chr3_2:83787967-83787986 | Msa0431720:CDS | 55.0% | |
| CATGCGTTACGCACATCCTC+AGG | - | chr3_2:83788027-83788046 | Msa0431720:CDS | 55.0% | |
| !! | GAGGTGTCACTGGAGTGTCA+TGG | - | chr3_2:83788413-83788432 | Msa0431720:CDS | 55.0% |
| TGGTTACCACCTCCTGTCTC+AGG | + | chr3_2:83788700-83788719 | None:intergenic | 55.0% | |
| AGGTGGTAACCAGCCTGCTA+GGG | - | chr3_2:83788708-83788727 | Msa0431720:intron | 55.0% | |
| ATGCGGACAGCTCAGAACAC+TGG | - | chr3_2:83789171-83789190 | Msa0431720:intron | 55.0% | |
| ! | AGCAAGAGCGTGAGAAGCGT+AGG | - | chr3_2:83790095-83790114 | Msa0431720:CDS | 55.0% |
| ! | GCAAGAGCGTGAGAAGCGTA+GGG | - | chr3_2:83790096-83790115 | Msa0431720:CDS | 55.0% |
| GGGACAAGTGGGCCAATGAA+TGG | - | chr3_2:83790134-83790153 | Msa0431720:intron | 55.0% | |
| ! | CAGTGCAACGGAAGCGCAAG+GGG | + | chr3_2:83786431-83786450 | None:intergenic | 60.0% |
| CTGGCTGTGCCGTCGGTAAA+CGG | - | chr3_2:83786484-83786503 | Msa0431720:three_prime_UTR | 60.0% | |
| CGCAGTTGTCACCTGGAGGA+AGG | + | chr3_2:83786751-83786770 | None:intergenic | 60.0% | |
| GTGGGCTCCTCCTCCAAACA+AGG | - | chr3_2:83787299-83787318 | Msa0431720:intron | 60.0% | |
| ! | GGCACCACTTGCGTGCTACT+TGG | - | chr3_2:83787438-83787457 | Msa0431720:intron | 60.0% |
| ACCGTCAAGGGGCAGCAGTT+TGG | - | chr3_2:83787978-83787997 | Msa0431720:CDS | 60.0% | |
| CCCAAACTGCTGCCCCTTGA+CGG | + | chr3_2:83787982-83788001 | None:intergenic | 60.0% | |
| CCGTCAAGGGGCAGCAGTTT+GGG | - | chr3_2:83787979-83787998 | Msa0431720:CDS | 60.0% | |
| CGTCAAGGGGCAGCAGTTTG+GGG | - | chr3_2:83787980-83787999 | Msa0431720:CDS | 60.0% | |
| !! | GGAGGTACTGGAGGTGTCAC+TGG | - | chr3_2:83788403-83788422 | Msa0431720:CDS | 60.0% |
| GAGGTGGTAACCAGCCTGCT+AGG | - | chr3_2:83788707-83788726 | Msa0431720:intron | 60.0% | |
| GGACGGAGAAGCTAGTGACG+AGG | - | chr3_2:83790201-83790220 | Msa0431720:intron | 60.0% | |
| CGTTTACCGACGGCACAGCC+AGG | + | chr3_2:83786486-83786505 | None:intergenic | 65.0% | |
| CAAGGGGCAGCAGTTTGGGG+AGG | - | chr3_2:83787983-83788002 | Msa0431720:CDS | 65.0% | |
| GGAGGAGGAGCCCACTCGTC+TGG | + | chr3_2:83787294-83787313 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 83786359 | 83790636 | 83786359 | ID=Msa0431720;Name=Msa0431720 |
| chr3_2 | mRNA | 83786359 | 83790636 | 83786359 | ID=Msa0431720-mRNA-1;Parent=Msa0431720;Name=Msa0431720-mRNA-1;_AED=0.08;_eAED=0.08;_QI=209|1|1|1|0.90|0.83|12|330|717 |
| chr3_2 | exon | 83786359 | 83787027 | 83786359 | ID=Msa0431720-mRNA-1:exon:23573;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83787326 | 83787434 | 83787326 | ID=Msa0431720-mRNA-1:exon:23572;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83787604 | 83788136 | 83787604 | ID=Msa0431720-mRNA-1:exon:23571;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83788266 | 83788464 | 83788266 | ID=Msa0431720-mRNA-1:exon:23570;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83788549 | 83788673 | 83788549 | ID=Msa0431720-mRNA-1:exon:23569;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83788750 | 83788833 | 83788750 | ID=Msa0431720-mRNA-1:exon:23568;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83788947 | 83789075 | 83788947 | ID=Msa0431720-mRNA-1:exon:23567;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83789184 | 83789312 | 83789184 | ID=Msa0431720-mRNA-1:exon:23566;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83789660 | 83789806 | 83789660 | ID=Msa0431720-mRNA-1:exon:23565;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83789891 | 83790128 | 83789891 | ID=Msa0431720-mRNA-1:exon:23564;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83790215 | 83790398 | 83790215 | ID=Msa0431720-mRNA-1:exon:23563;Parent=Msa0431720-mRNA-1 |
| chr3_2 | exon | 83790490 | 83790636 | 83790490 | ID=Msa0431720-mRNA-1:exon:23562;Parent=Msa0431720-mRNA-1 |
| chr3_2 | five_prime_UTR | 83790490 | 83790636 | 83790490 | ID=Msa0431720-mRNA-1:five_prime_utr;Parent=Msa0431720-mRNA-1 |
| chr3_2 | five_prime_UTR | 83790337 | 83790398 | 83790337 | ID=Msa0431720-mRNA-1:five_prime_utr;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83790215 | 83790336 | 83790215 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83789891 | 83790128 | 83789891 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83789660 | 83789806 | 83789660 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83789184 | 83789312 | 83789184 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83788947 | 83789075 | 83788947 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83788750 | 83788833 | 83788750 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83788549 | 83788673 | 83788549 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83788266 | 83788464 | 83788266 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83787604 | 83788136 | 83787604 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83787326 | 83787434 | 83787326 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | CDS | 83786689 | 83787027 | 83786689 | ID=Msa0431720-mRNA-1:cds;Parent=Msa0431720-mRNA-1 |
| chr3_2 | three_prime_UTR | 83786359 | 83786688 | 83786359 | ID=Msa0431720-mRNA-1:three_prime_utr;Parent=Msa0431720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
