Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244940 | XP_024632729.1 | 94.337 | 618 | 35 | 0 | 1 | 618 | 1 | 618 | 0.0 | 1196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244940 | sp|P09189|HSP7C_PETHY | 65.590 | 619 | 207 | 5 | 1 | 617 | 1 | 615 | 0.0 | 817 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244940 | A0A396J8Z6 | 92.528 | 629 | 36 | 1 | 1 | 618 | 1 | 629 | 0.0 | 1183 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0244940 | 0.833939 | 3.997579e-56 | -8.615850e-47 |
| Msa0017510 | Msa0244940 | 0.809869 | 1.528414e-50 | -8.615850e-47 |
| Msa0061380 | Msa0244940 | 0.801408 | 9.133302e-49 | -8.615850e-47 |
| Msa0121090 | Msa0244940 | 0.805052 | 1.608272e-49 | -8.615850e-47 |
| Msa0143560 | Msa0244940 | 0.816107 | 6.556562e-52 | -8.615850e-47 |
| Msa0157290 | Msa0244940 | 0.810481 | 1.128122e-50 | -8.615850e-47 |
| Msa0208140 | Msa0244940 | 0.803757 | 2.992985e-49 | -8.615850e-47 |
| Msa0212990 | Msa0244940 | 0.830013 | 3.729604e-55 | -8.615850e-47 |
| Msa0224780 | Msa0244940 | 0.803783 | 2.956339e-49 | -8.615850e-47 |
| Msa0225100 | Msa0244940 | 0.822394 | 2.425299e-53 | -8.615850e-47 |
| Msa0225460 | Msa0244940 | 0.800618 | 1.324576e-48 | -8.615850e-47 |
| Msa0243600 | Msa0244940 | 0.812998 | 3.197466e-51 | -8.615850e-47 |
| Msa0244940 | Msa0244950 | 0.840941 | 6.418541e-58 | -8.615850e-47 |
| Msa0244940 | Msa0244960 | 0.804284 | 2.326101e-49 | -8.615850e-47 |
| Msa0244940 | Msa0245940 | 0.811861 | 5.663447e-51 | -8.615850e-47 |
| Msa0244940 | Msa0260780 | 0.802729 | 4.886633e-49 | -8.615850e-47 |
| Msa0244940 | Msa0266180 | 0.800369 | 1.488923e-48 | -8.615850e-47 |
| Msa0244940 | Msa0284520 | 0.800881 | 1.170637e-48 | -8.615850e-47 |
| Msa0244940 | Msa0285000 | 0.816055 | 6.734884e-52 | -8.615850e-47 |
| Msa0244940 | Msa0287740 | 0.830874 | 2.296096e-55 | -8.615850e-47 |
| Msa0244940 | Msa0287780 | 0.801288 | 9.664999e-49 | -8.615850e-47 |
| Msa0244940 | Msa0305700 | 0.804884 | 1.743639e-49 | -8.615850e-47 |
| Msa0244940 | Msa0321650 | 0.952786 | 1.142041e-110 | -8.615850e-47 |
| Msa0244940 | Msa0323810 | 0.831303 | 1.801977e-55 | -8.615850e-47 |
| Msa0244940 | Msa0330340 | 0.829367 | 5.356059e-55 | -8.615850e-47 |
| Msa0244940 | Msa0337700 | 0.802868 | 4.573526e-49 | -8.615850e-47 |
| Msa0244940 | Msa0341540 | 0.800011 | 1.760132e-48 | -8.615850e-47 |
| Msa0244940 | Msa0367870 | 0.810533 | 1.099317e-50 | -8.615850e-47 |
| Msa0244940 | Msa0371170 | 0.801785 | 7.643083e-49 | -8.615850e-47 |
| Msa0244940 | Msa0376350 | 0.808853 | 2.525213e-50 | -8.615850e-47 |
| Msa0244940 | Msa0388960 | 0.843941 | 1.027670e-58 | -8.615850e-47 |
| Msa0244940 | Msa0392510 | 0.809120 | 2.214351e-50 | -8.615850e-47 |
| Msa0244940 | Msa0403640 | 0.813486 | 2.498205e-51 | -8.615850e-47 |
| Msa0244940 | Msa0424790 | 0.808021 | 3.799773e-50 | -8.615850e-47 |
| Msa0244940 | Msa0425170 | 0.846495 | 2.095942e-59 | -8.615850e-47 |
| Msa0244940 | Msa0431720 | 0.806827 | 6.809394e-50 | -8.615850e-47 |
| Msa0244940 | Msa0463060 | 0.809081 | 2.257361e-50 | -8.615850e-47 |
| Msa0244940 | Msa0464680 | 0.808029 | 3.785676e-50 | -8.615850e-47 |
| Msa0244940 | Msa0467770 | 0.804877 | 1.748958e-49 | -8.615850e-47 |
| Msa0244940 | Msa0471670 | 0.807086 | 6.002266e-50 | -8.615850e-47 |
| Msa0244940 | Msa0488560 | 0.811184 | 7.948772e-51 | -8.615850e-47 |
| Msa0244940 | Msa0516170 | 0.809177 | 2.152883e-50 | -8.615850e-47 |
| Msa0244940 | Msa0531180 | 0.805933 | 1.050748e-49 | -8.615850e-47 |
| Msa0244940 | Msa0541580 | 0.800385 | 1.477318e-48 | -8.615850e-47 |
| Msa0244940 | Msa0545210 | 0.819516 | 1.114557e-52 | -8.615850e-47 |
| Msa0244940 | Msa0553240 | 0.809169 | 2.160683e-50 | -8.615850e-47 |
| Msa0244940 | Msa0571130 | 0.817220 | 3.692675e-52 | -8.615850e-47 |
| Msa0244940 | Msa0589510 | 0.834915 | 2.274116e-56 | -8.615850e-47 |
| Msa0244940 | Msa0600930 | 0.800565 | 1.358082e-48 | -8.615850e-47 |
| Msa0244940 | Msa0601750 | 0.806384 | 8.443597e-50 | -8.615850e-47 |
| Msa0244940 | Msa0622650 | 0.822957 | 1.793652e-53 | -8.615850e-47 |
| Msa0244940 | Msa0626450 | 0.819845 | 9.376794e-53 | -8.615850e-47 |
| Msa0244940 | Msa0626490 | 0.814104 | 1.826105e-51 | -8.615850e-47 |
| Msa0244940 | Msa0661650 | 0.818814 | 1.610220e-52 | -8.615850e-47 |
| Msa0244940 | Msa0664600 | 0.817519 | 3.161550e-52 | -8.615850e-47 |
| Msa0244940 | Msa0681250 | 0.815249 | 1.018376e-51 | -8.615850e-47 |
| Msa0244940 | Msa0681270 | 0.811893 | 5.574417e-51 | -8.615850e-47 |
| Msa0244940 | Msa0741220 | 0.817142 | 3.844431e-52 | -8.615850e-47 |
| Msa0244940 | Msa0760130 | 0.805053 | 1.607361e-49 | -8.615850e-47 |
| Msa0244940 | Msa0829330 | 0.800656 | 1.301198e-48 | -8.615850e-47 |
| Msa0244940 | Msa0832340 | 0.824261 | 8.885126e-54 | -8.615850e-47 |
| Msa0244940 | Msa0861540 | 0.820521 | 6.563667e-53 | -8.615850e-47 |
| Msa0244940 | Msa0875290 | 0.823198 | 1.575927e-53 | -8.615850e-47 |
| Msa0244940 | Msa0880140 | 0.806219 | 9.148835e-50 | -8.615850e-47 |
| Msa0244940 | Msa0901930 | 0.811316 | 7.442450e-51 | -8.615850e-47 |
| Msa0244940 | Msa0909140 | 0.802145 | 6.445127e-49 | -8.615850e-47 |
| Msa0244940 | Msa0933100 | 0.815769 | 7.803161e-52 | -8.615850e-47 |
| Msa0244940 | Msa0967870 | 0.832247 | 1.054075e-55 | -8.615850e-47 |
| Msa0244940 | Msa1012020 | 0.805756 | 1.144627e-49 | -8.615850e-47 |
| Msa0244940 | Msa1016320 | 0.808981 | 2.371220e-50 | -8.615850e-47 |
| Msa0244940 | Msa1019150 | 0.818669 | 1.737182e-52 | -8.615850e-47 |
| Msa0244940 | Msa1021210 | 0.824264 | 8.868411e-54 | -8.615850e-47 |
| Msa0244940 | Msa1023500 | 0.804932 | 1.703675e-49 | -8.615850e-47 |
| Msa0244940 | Msa1036610 | 0.801900 | 7.238038e-49 | -8.615850e-47 |
| Msa0244940 | Msa1047080 | 0.804600 | 1.998954e-49 | -8.615850e-47 |
| Msa0244940 | Msa1081330 | 0.802123 | 6.512685e-49 | -8.615850e-47 |
| Msa0244940 | Msa1100050 | 0.809427 | 1.902602e-50 | -8.615850e-47 |
| Msa0244940 | Msa1106510 | 0.842388 | 2.666003e-58 | -8.615850e-47 |
| Msa0244940 | Msa1121490 | 0.802048 | 6.750313e-49 | -8.615850e-47 |
| Msa0244940 | Msa1135470 | 0.801235 | 9.909862e-49 | -8.615850e-47 |
| Msa0244940 | Msa1142020 | 0.840433 | 8.721255e-58 | -8.615850e-47 |
| Msa0244940 | Msa1147740 | 0.833031 | 6.733429e-56 | -8.615850e-47 |
| Msa0244940 | Msa1151910 | 0.817941 | 2.538901e-52 | -8.615850e-47 |
| Msa0244940 | Msa1163090 | 0.806479 | 8.063115e-50 | -8.615850e-47 |
| Msa0244940 | Msa1178180 | 0.802604 | 5.185955e-49 | -8.615850e-47 |
| Msa0244940 | Msa1190920 | 0.810154 | 1.327483e-50 | -8.615850e-47 |
| Msa0244940 | Msa1199570 | 0.813334 | 2.697865e-51 | -8.615850e-47 |
| Msa0244940 | Msa1221050 | 0.818825 | 1.601729e-52 | -8.615850e-47 |
| Msa0244940 | Msa1239920 | 0.803445 | 3.474002e-49 | -8.615850e-47 |
| Msa0244940 | Msa1297290 | 0.820986 | 5.131143e-53 | -8.615850e-47 |
| Msa0244940 | Msa1302830 | 0.800338 | 1.510071e-48 | -8.615850e-47 |
| Msa0244940 | Msa1309030 | 0.824145 | 9.460179e-54 | -8.615850e-47 |
| Msa0244940 | Msa1313150 | 0.842176 | 3.034467e-58 | -8.615850e-47 |
| Msa0244940 | Msa1324080 | 0.811423 | 7.054508e-51 | -8.615850e-47 |
| Msa0244940 | Msa1328710 | 0.814674 | 1.366145e-51 | -8.615850e-47 |
| Msa0244940 | Msa1353470 | 0.834363 | 3.130816e-56 | -8.615850e-47 |
| Msa0244940 | Msa1355450 | 0.804134 | 2.499746e-49 | -8.615850e-47 |
| Msa0244940 | Msa1374470 | 0.807748 | 4.343331e-50 | -8.615850e-47 |
| Msa0244940 | Msa1385000 | 0.817579 | 3.065567e-52 | -8.615850e-47 |
| Msa0244940 | Msa1392240 | 0.813108 | 3.023759e-51 | -8.615850e-47 |
| Msa0244940 | Msa1423880 | 0.835705 | 1.436385e-56 | -8.615850e-47 |
| Msa0244940 | Msa1440560 | 0.804042 | 2.611741e-49 | -8.615850e-47 |
| Msa0244940 | Msa1440960 | 0.808910 | 2.455443e-50 | -8.615850e-47 |
| Msa0244940 | Msa1450100 | 0.824035 | 1.004059e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244940 | MtrunA17_Chr2g0298861 | 92.528 | 629 | 36 | 1 | 1 | 618 | 1 | 629 | 0.0 | 1183 |
| Msa0244940 | MtrunA17_Chr7g0223721 | 81.422 | 619 | 114 | 1 | 1 | 619 | 1 | 618 | 0.0 | 1032 |
| Msa0244940 | MtrunA17_Chr4g0040931 | 80.744 | 618 | 118 | 1 | 1 | 618 | 1 | 617 | 0.0 | 1014 |
| Msa0244940 | MtrunA17_Chr2g0298851 | 74.960 | 619 | 154 | 1 | 1 | 619 | 1 | 618 | 0.0 | 975 |
| Msa0244940 | MtrunA17_Chr7g0223851 | 73.096 | 617 | 165 | 1 | 1 | 617 | 10 | 625 | 0.0 | 933 |
| Msa0244940 | MtrunA17_Chr2g0293581 | 71.452 | 620 | 174 | 3 | 1 | 618 | 1 | 619 | 0.0 | 925 |
| Msa0244940 | MtrunA17_Chr5g0427901 | 71.656 | 628 | 165 | 3 | 1 | 617 | 1 | 626 | 0.0 | 919 |
| Msa0244940 | MtrunA17_Chr7g0225671 | 72.594 | 613 | 166 | 2 | 6 | 618 | 13 | 623 | 0.0 | 911 |
| Msa0244940 | MtrunA17_Chr7g0233311 | 71.567 | 619 | 174 | 2 | 1 | 618 | 1 | 618 | 0.0 | 910 |
| Msa0244940 | MtrunA17_Chr7g0223801 | 71.707 | 615 | 170 | 4 | 1 | 615 | 1 | 611 | 0.0 | 901 |
| Msa0244940 | MtrunA17_Chr7g0221661 | 71.753 | 616 | 172 | 2 | 1 | 616 | 1 | 614 | 0.0 | 901 |
| Msa0244940 | MtrunA17_Chr7g0223821 | 71.567 | 619 | 170 | 4 | 1 | 615 | 1 | 617 | 0.0 | 890 |
| Msa0244940 | MtrunA17_Chr7g0223821 | 47.222 | 108 | 46 | 2 | 519 | 615 | 596 | 703 | 4.24e-16 | 82.0 |
| Msa0244940 | MtrunA17_Chr4g0012541 | 69.692 | 617 | 177 | 2 | 1 | 617 | 1 | 607 | 0.0 | 881 |
| Msa0244940 | MtrunA17_Chr2g0287631 | 70.275 | 619 | 182 | 2 | 1 | 618 | 1 | 618 | 0.0 | 875 |
| Msa0244940 | MtrunA17_Chr7g0217971 | 70.149 | 603 | 153 | 4 | 1 | 603 | 1 | 576 | 0.0 | 857 |
| Msa0244940 | MtrunA17_Chr7g0223831 | 68.174 | 619 | 168 | 2 | 1 | 619 | 1 | 590 | 0.0 | 852 |
| Msa0244940 | MtrunA17_Chr7g0233301 | 67.851 | 619 | 166 | 2 | 1 | 618 | 1 | 587 | 0.0 | 848 |
| Msa0244940 | MtrunA17_Chr7g0215261 | 68.116 | 621 | 160 | 5 | 1 | 619 | 1 | 585 | 0.0 | 840 |
| Msa0244940 | MtrunA17_Chr7g0228281 | 67.367 | 619 | 154 | 6 | 1 | 618 | 62 | 633 | 0.0 | 828 |
| Msa0244940 | MtrunA17_Chr8g0390821 | 64.179 | 670 | 170 | 8 | 1 | 617 | 1 | 653 | 0.0 | 827 |
| Msa0244940 | MtrunA17_Chr7g0223181 | 64.943 | 619 | 211 | 5 | 1 | 617 | 1 | 615 | 0.0 | 808 |
| Msa0244940 | MtrunA17_Chr7g0223711 | 64.111 | 613 | 216 | 4 | 1 | 612 | 1 | 610 | 0.0 | 807 |
| Msa0244940 | MtrunA17_Chr7g0223781 | 64.715 | 615 | 213 | 3 | 1 | 615 | 1 | 611 | 0.0 | 805 |
| Msa0244940 | MtrunA17_Chr2g0296391 | 71.940 | 531 | 147 | 2 | 1 | 530 | 1 | 530 | 0.0 | 805 |
| Msa0244940 | MtrunA17_Chr8g0350731 | 64.975 | 611 | 211 | 3 | 1 | 611 | 29 | 636 | 0.0 | 803 |
| Msa0244940 | MtrunA17_Chr7g0223031 | 64.869 | 612 | 212 | 3 | 1 | 612 | 1 | 609 | 0.0 | 801 |
| Msa0244940 | MtrunA17_Chr4g0031301 | 64.297 | 619 | 215 | 5 | 1 | 617 | 1 | 615 | 0.0 | 800 |
| Msa0244940 | MtrunA17_Chr7g0223291 | 63.813 | 619 | 218 | 5 | 1 | 617 | 1 | 615 | 0.0 | 798 |
| Msa0244940 | MtrunA17_Chr7g0262821 | 64.136 | 619 | 216 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa0244940 | MtrunA17_Chr7g0223731 | 63.725 | 612 | 219 | 3 | 1 | 612 | 1 | 609 | 0.0 | 797 |
| Msa0244940 | MtrunA17_Chr4g0031321 | 64.136 | 619 | 216 | 5 | 1 | 617 | 1 | 615 | 0.0 | 796 |
| Msa0244940 | MtrunA17_Chr7g0223751 | 63.235 | 612 | 222 | 3 | 1 | 612 | 1 | 609 | 0.0 | 788 |
| Msa0244940 | MtrunA17_Chr4g0073741 | 63.166 | 619 | 221 | 6 | 1 | 617 | 1 | 614 | 0.0 | 786 |
| Msa0244940 | MtrunA17_Chr7g0223741 | 66.044 | 589 | 197 | 3 | 1 | 588 | 1 | 587 | 0.0 | 784 |
| Msa0244940 | MtrunA17_Chr7g0223621 | 62.908 | 612 | 224 | 3 | 1 | 612 | 1 | 609 | 0.0 | 782 |
| Msa0244940 | MtrunA17_Chr7g0248131 | 62.987 | 616 | 222 | 6 | 1 | 612 | 1 | 614 | 0.0 | 775 |
| Msa0244940 | MtrunA17_Chr7g0223631 | 64.379 | 612 | 201 | 5 | 1 | 612 | 1 | 595 | 0.0 | 773 |
| Msa0244940 | MtrunA17_Chr7g0248151 | 62.843 | 619 | 226 | 4 | 1 | 617 | 1 | 617 | 0.0 | 765 |
| Msa0244940 | MtrunA17_Chr7g0223701 | 61.290 | 620 | 230 | 5 | 1 | 612 | 1 | 618 | 0.0 | 763 |
| Msa0244940 | MtrunA17_Chr1g0166551 | 61.463 | 615 | 123 | 5 | 6 | 619 | 2 | 503 | 0.0 | 712 |
| Msa0244940 | MtrunA17_Chr2g0293601 | 68.208 | 519 | 129 | 3 | 1 | 518 | 1 | 484 | 0.0 | 712 |
| Msa0244940 | MtrunA17_Chr7g0223681 | 64.751 | 522 | 181 | 3 | 91 | 612 | 2 | 520 | 0.0 | 687 |
| Msa0244940 | MtrunA17_Chr7g0223541 | 62.569 | 545 | 200 | 4 | 74 | 617 | 31 | 572 | 0.0 | 685 |
| Msa0244940 | MtrunA17_Chr2g0331381 | 63.822 | 539 | 132 | 5 | 10 | 548 | 7 | 482 | 0.0 | 683 |
| Msa0244940 | MtrunA17_Chr6g0462601 | 57.118 | 583 | 244 | 5 | 1 | 581 | 1 | 579 | 0.0 | 658 |
| Msa0244940 | MtrunA17_Chr6g0462681 | 54.120 | 619 | 277 | 6 | 1 | 617 | 1 | 614 | 0.0 | 657 |
| Msa0244940 | MtrunA17_Chr2g0284681 | 53.883 | 618 | 259 | 8 | 5 | 614 | 4 | 603 | 0.0 | 632 |
| Msa0244940 | MtrunA17_Chr2g0293561 | 77.273 | 374 | 85 | 0 | 1 | 374 | 1 | 374 | 0.0 | 621 |
| Msa0244940 | MtrunA17_Chr6g0462711 | 53.084 | 616 | 278 | 7 | 9 | 617 | 10 | 621 | 0.0 | 619 |
| Msa0244940 | MtrunA17_Chr6g0462641 | 51.840 | 625 | 287 | 8 | 1 | 617 | 1 | 619 | 0.0 | 600 |
| Msa0244940 | MtrunA17_Chr8g0388761 | 52.115 | 591 | 270 | 9 | 7 | 592 | 36 | 618 | 0.0 | 598 |
| Msa0244940 | MtrunA17_Chr8g0388671 | 52.284 | 591 | 269 | 9 | 7 | 592 | 36 | 618 | 0.0 | 597 |
| Msa0244940 | MtrunA17_Chr6g0462771 | 51.948 | 616 | 284 | 7 | 9 | 617 | 9 | 619 | 0.0 | 596 |
| Msa0244940 | MtrunA17_Chr6g0462611 | 51.978 | 556 | 262 | 5 | 63 | 617 | 11 | 562 | 0.0 | 565 |
| Msa0244940 | MtrunA17_Chr2g0299821 | 64.796 | 392 | 134 | 3 | 1 | 390 | 1 | 390 | 5.73e-179 | 516 |
| Msa0244940 | MtrunA17_Chr2g0299821 | 48.077 | 104 | 45 | 3 | 444 | 538 | 379 | 482 | 6.35e-20 | 93.2 |
| Msa0244940 | MtrunA17_Chr2g0293271 | 60.412 | 437 | 102 | 4 | 21 | 457 | 43 | 408 | 1.92e-177 | 509 |
| Msa0244940 | MtrunA17_Chr2g0299921 | 68.020 | 394 | 122 | 2 | 3 | 396 | 1023 | 1412 | 1.70e-176 | 546 |
| Msa0244940 | MtrunA17_Chr2g0299921 | 67.095 | 389 | 123 | 3 | 3 | 390 | 1407 | 1791 | 2.04e-162 | 508 |
| Msa0244940 | MtrunA17_Chr7g0223761 | 70.185 | 379 | 69 | 4 | 241 | 618 | 3 | 338 | 4.48e-173 | 495 |
| Msa0244940 | MtrunA17_Chr2g0299791 | 66.324 | 389 | 127 | 2 | 1 | 389 | 1034 | 1418 | 4.60e-172 | 526 |
| Msa0244940 | MtrunA17_Chr2g0299851 | 65.385 | 390 | 131 | 2 | 1 | 390 | 1030 | 1415 | 1.53e-171 | 525 |
| Msa0244940 | MtrunA17_Chr1g0151991 | 76.289 | 291 | 69 | 0 | 1 | 291 | 1 | 291 | 2.97e-167 | 478 |
| Msa0244940 | MtrunA17_Chr2g0299881 | 64.031 | 392 | 133 | 3 | 2 | 389 | 1031 | 1418 | 4.47e-163 | 504 |
| Msa0244940 | MtrunA17_Chr2g0299881 | 58.904 | 73 | 28 | 1 | 180 | 250 | 1403 | 1475 | 4.86e-18 | 89.0 |
| Msa0244940 | MtrunA17_Chr6g0462861 | 44.623 | 623 | 311 | 11 | 6 | 617 | 6 | 605 | 4.23e-161 | 476 |
| Msa0244940 | MtrunA17_Chr2g0279901 | 47.576 | 557 | 268 | 12 | 10 | 560 | 57 | 595 | 3.63e-159 | 472 |
| Msa0244940 | MtrunA17_Chr7g0245521 | 77.289 | 273 | 62 | 0 | 1 | 273 | 1 | 273 | 1.98e-153 | 442 |
| Msa0244940 | MtrunA17_Chr4g0049501 | 43.922 | 617 | 309 | 17 | 10 | 614 | 54 | 645 | 2.50e-152 | 454 |
| Msa0244940 | MtrunA17_Chr2g0277021 | 44.464 | 560 | 289 | 11 | 8 | 561 | 70 | 613 | 4.06e-143 | 432 |
| Msa0244940 | MtrunA17_Chr7g0245531 | 66.454 | 313 | 103 | 2 | 305 | 617 | 2 | 312 | 1.47e-141 | 414 |
| Msa0244940 | MtrunA17_Chr1g0152001 | 67.213 | 305 | 97 | 3 | 315 | 619 | 1 | 302 | 1.95e-137 | 403 |
| Msa0244940 | MtrunA17_Chr1g0188611 | 60.606 | 297 | 109 | 2 | 322 | 618 | 1 | 289 | 3.03e-109 | 330 |
| Msa0244940 | MtrunA17_Chr1g0188601 | 78.010 | 191 | 42 | 0 | 92 | 282 | 1 | 191 | 9.62e-105 | 315 |
| Msa0244940 | MtrunA17_Chr7g0223671 | 75.000 | 196 | 45 | 1 | 74 | 265 | 8 | 203 | 3.35e-104 | 313 |
| Msa0244940 | MtrunA17_Chr6g0462631 | 51.603 | 312 | 108 | 3 | 100 | 410 | 22 | 291 | 4.09e-97 | 299 |
| Msa0244940 | MtrunA17_Chr6g0462751 | 46.974 | 347 | 124 | 4 | 67 | 410 | 12 | 301 | 1.58e-94 | 293 |
| Msa0244940 | MtrunA17_Chr7g0223771 | 86.275 | 153 | 21 | 0 | 93 | 245 | 1 | 153 | 5.90e-93 | 283 |
| Msa0244940 | MtrunA17_Chr5g0394391 | 32.157 | 510 | 326 | 10 | 9 | 505 | 29 | 531 | 3.22e-81 | 266 |
| Msa0244940 | MtrunA17_Chr7g0245541 | 61.386 | 202 | 77 | 1 | 418 | 619 | 1 | 201 | 1.52e-76 | 242 |
| Msa0244940 | MtrunA17_Chr4g0004331 | 32.743 | 452 | 284 | 7 | 10 | 445 | 4 | 451 | 8.95e-75 | 256 |
| Msa0244940 | MtrunA17_Chr4g0046881 | 79.433 | 141 | 26 | 1 | 135 | 275 | 14 | 151 | 2.11e-74 | 234 |
| Msa0244940 | MtrunA17_Chr7g0223861 | 83.206 | 131 | 22 | 0 | 78 | 208 | 4 | 134 | 1.57e-73 | 232 |
| Msa0244940 | MtrunA17_Chr2g0331901 | 31.818 | 440 | 284 | 6 | 10 | 437 | 4 | 439 | 8.41e-73 | 250 |
| Msa0244940 | MtrunA17_Chr6g0462791 | 61.714 | 175 | 66 | 1 | 109 | 283 | 2 | 175 | 3.82e-69 | 222 |
| Msa0244940 | MtrunA17_Chr3g0098761 | 31.754 | 422 | 279 | 6 | 10 | 429 | 4 | 418 | 3.24e-68 | 236 |
| Msa0244940 | MtrunA17_Chr5g0444001 | 31.935 | 429 | 283 | 6 | 10 | 433 | 4 | 428 | 1.34e-67 | 229 |
| Msa0244940 | MtrunA17_Chr4g0064621 | 31.792 | 519 | 323 | 13 | 9 | 504 | 140 | 650 | 1.42e-60 | 214 |
| Msa0244940 | MtrunA17_Chr4g0060241 | 30.859 | 512 | 304 | 18 | 10 | 497 | 21 | 506 | 3.46e-57 | 202 |
| Msa0244940 | MtrunA17_Chr3g0120101 | 27.079 | 517 | 339 | 11 | 12 | 495 | 29 | 540 | 2.50e-56 | 204 |
| Msa0244940 | MtrunA17_Chr5g0394221 | 37.658 | 316 | 176 | 8 | 280 | 581 | 40 | 348 | 6.32e-53 | 185 |
| Msa0244940 | MtrunA17_Chr6g0462701 | 53.801 | 171 | 55 | 1 | 100 | 270 | 22 | 168 | 2.51e-52 | 177 |
| Msa0244940 | MtrunA17_Chr6g0481391 | 67.213 | 122 | 37 | 1 | 38 | 159 | 13 | 131 | 7.27e-49 | 166 |
| Msa0244940 | MtrunA17_Chr5g0442171 | 31.307 | 329 | 206 | 8 | 170 | 488 | 1 | 319 | 1.37e-44 | 161 |
| Msa0244940 | MtrunA17_Chr4g0046871 | 73.786 | 103 | 26 | 1 | 336 | 438 | 6 | 107 | 2.16e-43 | 150 |
| Msa0244940 | MtrunA17_Chr6g0462691 | 52.448 | 143 | 66 | 2 | 322 | 463 | 1 | 142 | 2.83e-40 | 144 |
| Msa0244940 | MtrunA17_Chr7g0223871 | 57.031 | 128 | 55 | 0 | 492 | 619 | 7 | 134 | 1.24e-38 | 139 |
| Msa0244940 | MtrunA17_Chr5g0394231 | 37.445 | 227 | 91 | 4 | 74 | 299 | 5 | 181 | 1.82e-36 | 134 |
| Msa0244940 | MtrunA17_Chr7g0223791 | 50.000 | 132 | 57 | 1 | 442 | 573 | 58 | 180 | 8.74e-33 | 124 |
| Msa0244940 | MtrunA17_Chr7g0223791 | 60.976 | 82 | 24 | 3 | 56 | 137 | 18 | 91 | 3.27e-22 | 94.4 |
| Msa0244940 | MtrunA17_Chr6g0481381 | 74.324 | 74 | 19 | 0 | 176 | 249 | 1 | 74 | 2.81e-32 | 123 |
| Msa0244940 | MtrunA17_Chr6g0481381 | 58.333 | 96 | 40 | 0 | 516 | 611 | 75 | 170 | 1.61e-28 | 112 |
| Msa0244940 | MtrunA17_Chr1g0188591 | 75.342 | 73 | 18 | 0 | 1 | 73 | 1 | 73 | 2.83e-31 | 117 |
| Msa0244940 | MtrunA17_Chr7g0223691 | 69.863 | 73 | 22 | 0 | 1 | 73 | 1 | 73 | 1.31e-30 | 114 |
| Msa0244940 | MtrunA17_Chr7g0223881 | 57.317 | 82 | 34 | 1 | 281 | 362 | 2 | 82 | 6.18e-26 | 101 |
| Msa0244940 | MtrunA17_Chr6g0462621 | 63.014 | 73 | 25 | 1 | 1 | 73 | 1 | 71 | 7.10e-24 | 95.5 |
| Msa0244940 | MtrunA17_Chr7g0223661 | 48.333 | 120 | 18 | 2 | 315 | 434 | 1 | 76 | 5.77e-23 | 93.2 |
| Msa0244940 | MtrunA17_Chr7g0221651 | 48.193 | 83 | 43 | 0 | 215 | 297 | 1 | 83 | 5.81e-21 | 87.8 |
| Msa0244940 | MtrunA17_Chr6g0462801 | 62.121 | 66 | 20 | 1 | 322 | 382 | 1 | 66 | 5.95e-18 | 78.6 |
| Msa0244940 | MtrunA17_Chr5g0442161 | 30.719 | 153 | 99 | 4 | 9 | 157 | 28 | 177 | 4.20e-16 | 76.6 |
| Msa0244940 | MtrunA17_Chr2g0299891 | 71.111 | 45 | 13 | 0 | 315 | 359 | 1 | 45 | 5.00e-16 | 73.2 |
| Msa0244940 | MtrunA17_Chr4g0064651 | 41.935 | 93 | 52 | 2 | 397 | 488 | 29 | 120 | 7.12e-15 | 71.6 |
| Msa0244940 | MtrunA17_Chr2g0284661 | 51.190 | 84 | 39 | 2 | 368 | 450 | 61 | 143 | 9.74e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244940 | AT3G12580.1 | 64.782 | 619 | 212 | 5 | 1 | 617 | 1 | 615 | 0.0 | 808 |
| Msa0244940 | AT5G02500.1 | 64.297 | 619 | 215 | 5 | 1 | 617 | 1 | 615 | 0.0 | 799 |
| Msa0244940 | AT5G02490.1 | 63.328 | 619 | 221 | 5 | 1 | 617 | 1 | 615 | 0.0 | 787 |
| Msa0244940 | AT3G09440.1 | 62.843 | 619 | 224 | 5 | 1 | 617 | 1 | 615 | 0.0 | 779 |
| Msa0244940 | AT3G09440.4 | 62.843 | 619 | 224 | 5 | 1 | 617 | 1 | 615 | 0.0 | 779 |
| Msa0244940 | AT3G09440.2 | 62.843 | 619 | 224 | 5 | 1 | 617 | 1 | 615 | 0.0 | 779 |
| Msa0244940 | AT3G09440.3 | 62.843 | 619 | 224 | 5 | 1 | 617 | 1 | 615 | 0.0 | 779 |
| Msa0244940 | AT1G16030.1 | 62.682 | 619 | 224 | 6 | 1 | 617 | 1 | 614 | 0.0 | 777 |
| Msa0244940 | AT1G56410.1 | 62.843 | 619 | 222 | 6 | 1 | 617 | 1 | 613 | 0.0 | 768 |
| Msa0244940 | AT5G28540.1 | 51.876 | 613 | 283 | 9 | 7 | 615 | 35 | 639 | 0.0 | 611 |
| Msa0244940 | AT5G42020.1 | 51.713 | 613 | 284 | 9 | 7 | 615 | 35 | 639 | 0.0 | 610 |
| Msa0244940 | AT5G42020.3 | 51.713 | 613 | 284 | 9 | 7 | 615 | 40 | 644 | 0.0 | 608 |
| Msa0244940 | AT5G02500.2 | 73.779 | 389 | 100 | 1 | 1 | 389 | 1 | 387 | 0.0 | 603 |
| Msa0244940 | AT1G09080.2 | 53.231 | 588 | 265 | 7 | 7 | 591 | 40 | 620 | 0.0 | 592 |
| Msa0244940 | AT1G09080.1 | 53.231 | 588 | 265 | 7 | 7 | 591 | 50 | 630 | 0.0 | 591 |
| Msa0244940 | AT5G42020.2 | 51.318 | 569 | 243 | 12 | 7 | 555 | 35 | 589 | 0.0 | 535 |
| Msa0244940 | AT5G09590.1 | 46.416 | 558 | 274 | 14 | 10 | 560 | 60 | 599 | 1.97e-148 | 445 |
| Msa0244940 | AT4G37910.1 | 45.601 | 557 | 280 | 11 | 10 | 560 | 55 | 594 | 4.32e-145 | 436 |
| Msa0244940 | AT4G37910.2 | 45.601 | 557 | 280 | 11 | 10 | 560 | 55 | 594 | 4.32e-145 | 436 |
| Msa0244940 | AT4G24280.1 | 44.107 | 560 | 291 | 11 | 8 | 561 | 79 | 622 | 1.50e-143 | 434 |
| Msa0244940 | AT5G49910.1 | 44.464 | 560 | 289 | 11 | 8 | 561 | 79 | 622 | 4.31e-143 | 432 |
| Msa0244940 | AT2G32120.1 | 32.943 | 513 | 313 | 10 | 9 | 508 | 30 | 524 | 2.23e-79 | 262 |
| Msa0244940 | AT2G32120.2 | 32.943 | 513 | 313 | 10 | 9 | 508 | 30 | 524 | 2.23e-79 | 262 |
| Msa0244940 | AT1G79930.2 | 32.301 | 452 | 286 | 6 | 10 | 445 | 4 | 451 | 1.69e-75 | 257 |
| Msa0244940 | AT1G79930.1 | 32.301 | 452 | 286 | 6 | 10 | 445 | 4 | 451 | 3.35e-75 | 257 |
| Msa0244940 | AT1G79920.3 | 32.301 | 452 | 286 | 6 | 10 | 445 | 4 | 451 | 1.74e-74 | 253 |
| Msa0244940 | AT1G79920.2 | 32.301 | 452 | 286 | 6 | 10 | 445 | 4 | 451 | 1.74e-74 | 253 |
| Msa0244940 | AT1G79920.4 | 32.301 | 452 | 286 | 6 | 10 | 445 | 4 | 451 | 1.74e-74 | 253 |
| Msa0244940 | AT1G79920.1 | 32.301 | 452 | 286 | 6 | 10 | 445 | 4 | 451 | 2.25e-74 | 253 |
| Msa0244940 | AT1G11660.4 | 34.321 | 405 | 258 | 6 | 10 | 411 | 4 | 403 | 4.83e-72 | 247 |
| Msa0244940 | AT1G11660.3 | 34.321 | 405 | 258 | 6 | 10 | 411 | 4 | 403 | 4.83e-72 | 247 |
| Msa0244940 | AT1G11660.1 | 34.321 | 405 | 258 | 6 | 10 | 411 | 4 | 403 | 4.83e-72 | 247 |
| Msa0244940 | AT1G11660.2 | 34.688 | 369 | 235 | 4 | 46 | 411 | 1 | 366 | 1.30e-65 | 229 |
| Msa0244940 | AT4G16660.1 | 27.290 | 524 | 340 | 13 | 6 | 495 | 23 | 539 | 1.50e-57 | 208 |
| Msa0244940 | AT4G16660.2 | 27.290 | 524 | 340 | 13 | 6 | 495 | 47 | 563 | 3.02e-57 | 207 |
Find 149 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAATAGTTCCTGCACTTT+TGG | 0.163788 | 2_2:+23800082 | None:intergenic |
| GGAGATTGCAGAGGCTTATT+TGG | 0.170727 | 2_2:-23800734 | Msa0244940:CDS |
| ATGGATGCTGGTGCCATTGC+TGG | 0.234093 | 2_2:-23800643 | Msa0244940:CDS |
| CCTGATGAGGCTGTTGCTTA+TGG | 0.243454 | 2_2:-23800019 | Msa0244940:CDS |
| GTGTCTCTCCTCACAATTAA+AGG | 0.259274 | 2_2:-23800493 | Msa0244940:CDS |
| TCAGATGCTAAGAGGTTAAT+TGG | 0.263493 | 2_2:-23800919 | Msa0244940:intron |
| TTTGAAGTTAAAGCCACTTC+TGG | 0.288192 | 2_2:-23800463 | Msa0244940:CDS |
| AAGGACACTCTCTTTCAAAT+TGG | 0.288998 | 2_2:-23800299 | Msa0244940:CDS |
| ACTTTGTGCAAGAATTTAAT+AGG | 0.318140 | 2_2:-23800393 | Msa0244940:CDS |
| ATGACTGCATTTACAAGTTA+AGG | 0.328913 | 2_2:-23799487 | Msa0244940:CDS |
| AAGGAATGCTCTAAAGAATA+AGG | 0.330434 | 2_2:-23799468 | Msa0244940:CDS |
| TATCTTTAGAAGTAAGATAT+TGG | 0.330640 | 2_2:+23799834 | None:intergenic |
| TCTTCATACACTCATTAAAA+AGG | 0.345773 | 2_2:+23800188 | None:intergenic |
| GGATAACCTTTCTTTGTCAT+TGG | 0.352083 | 2_2:+23799604 | None:intergenic |
| AACGCACAAAACACCGTCTT+TGG | 0.355144 | 2_2:-23801776 | Msa0244940:intron |
| TACATGATATTGTTCTTGTC+GGG | 0.378162 | 2_2:-23800120 | Msa0244940:CDS |
| CTGATGAGGCTGTTGCTTAT+GGG | 0.384178 | 2_2:-23800018 | Msa0244940:CDS |
| CTACAATCAAGGCACTATAT+TGG | 0.386508 | 2_2:+23799810 | None:intergenic |
| TGGCCGTTCAAGGCTATTGC+TGG | 0.387343 | 2_2:-23800853 | Msa0244940:CDS |
| CATATTCATGTGTTGGTGTT+TGG | 0.387460 | 2_2:-23801925 | Msa0244940:CDS |
| CTCAACCTCCTCAAGGCTCT+TGG | 0.389032 | 2_2:+23800343 | None:intergenic |
| ACGTCTCGCAGCACCAAGTT+TGG | 0.390269 | 2_2:+23799950 | None:intergenic |
| CCATAAGCAACAGCCTCATC+AGG | 0.390857 | 2_2:+23800019 | None:intergenic |
| CATTAAGAATGTTCCAAACT+TGG | 0.396244 | 2_2:-23799963 | Msa0244940:CDS |
| CCCATTGTCACTTGGTATCT+CGG | 0.399514 | 2_2:-23799924 | Msa0244940:CDS |
| TGAGATTGATTATTTATATG+AGG | 0.407076 | 2_2:-23800266 | Msa0244940:CDS |
| GTACATGATATTGTTCTTGT+CGG | 0.419451 | 2_2:-23800121 | Msa0244940:CDS |
| TTTAAATTTGGTCTATGCTA+TGG | 0.420325 | 2_2:+23802200 | None:intergenic |
| TTTAAATTTGGTCTATGCTA+TGG | 0.420325 | 2_2:+23802260 | None:intergenic |
| TCATTACCTTGGCCTTCCTT+AGG | 0.431184 | 2_2:+23799519 | None:intergenic |
| TATATTGTTGTGGCCGTTCA+AGG | 0.437611 | 2_2:-23800863 | Msa0244940:CDS |
| CCGAGATACCAAGTGACAAT+GGG | 0.444390 | 2_2:+23799924 | None:intergenic |
| CTATTGCGTAACTTCTTCAA+TGG | 0.452833 | 2_2:-23800067 | Msa0244940:CDS |
| TAAATAATCAATCTCAATAG+TGG | 0.454560 | 2_2:+23800273 | None:intergenic |
| TTGTCTTTGATCTTGGTGGT+GGG | 0.456314 | 2_2:-23800525 | Msa0244940:CDS |
| TGATTATCCTCACAACGTTA+AGG | 0.457564 | 2_2:+23800620 | None:intergenic |
| TTTGTCTTTGATCTTGGTGG+TGG | 0.458128 | 2_2:-23800526 | Msa0244940:CDS |
| GTTGAGAACTTCTTGTGAAA+AGG | 0.462126 | 2_2:-23800326 | Msa0244940:CDS |
| ACTGCTGCAGCTATTGCATA+TGG | 0.476452 | 2_2:-23800589 | Msa0244940:CDS |
| CTTCTGGAAACACTCACCTC+GGG | 0.477285 | 2_2:-23800447 | Msa0244940:CDS |
| TGTTCCTCGTGGCCATCCCT+TGG | 0.477913 | 2_2:-23799714 | Msa0244940:CDS |
| TTTAGAAGTAAGATATTGGC+TGG | 0.480975 | 2_2:+23799838 | None:intergenic |
| TATTGCGTAACTTCTTCAAT+GGG | 0.481757 | 2_2:-23800066 | Msa0244940:CDS |
| CAAGATTGGCATGGTAATGT+TGG | 0.483132 | 2_2:+23799127 | None:intergenic |
| TTCTTGAGGATCATCTGAAA+GGG | 0.487611 | 2_2:-23799340 | Msa0244940:CDS |
| ATCTAATGCATTCATTACCT+TGG | 0.490089 | 2_2:+23799508 | None:intergenic |
| TTATGAGTGTGGTGATTCCT+AGG | 0.490594 | 2_2:-23799886 | Msa0244940:CDS |
| CTTCTTGTGAAAAGGCGAAA+AGG | 0.494676 | 2_2:-23800318 | Msa0244940:CDS |
| TGAGAATCGTTAAAATAAGC+AGG | 0.500441 | 2_2:+23800679 | None:intergenic |
| GGATGGCCACGAGGAACACT+TGG | 0.501644 | 2_2:+23799719 | None:intergenic |
| TTCATGTGTTGGTGTTTGGT+TGG | 0.501933 | 2_2:-23801921 | Msa0244940:CDS |
| CGAAAAGCCACCATGGATGC+TGG | 0.502548 | 2_2:-23800655 | Msa0244940:CDS |
| TTTCACTGATGCTCAAAGGT+TGG | 0.504490 | 2_2:-23801831 | Msa0244940:CDS |
| TATTGGCTGGTCTTCTTGAA+AGG | 0.508102 | 2_2:+23799851 | None:intergenic |
| ACGAGGAACACTTGGAAGAC+CGG | 0.508128 | 2_2:+23799727 | None:intergenic |
| GTTGGTCGGTGGTGCTGCTA+AGG | 0.508209 | 2_2:-23801813 | Msa0244940:CDS |
| GAGATTATCCACAACGATGA+AGG | 0.511349 | 2_2:-23801881 | Msa0244940:CDS |
| GCCTTGATTGTAGTTTGTGA+GGG | 0.515295 | 2_2:-23799800 | Msa0244940:CDS |
| TGATGAGGCTGTTGCTTATG+GGG | 0.522303 | 2_2:-23800017 | Msa0244940:CDS |
| AAAATTGATTCAAGAAGCTA+AGG | 0.522479 | 2_2:-23799567 | Msa0244940:CDS |
| TGCTTTGCTATCGATGAAAA+CGG | 0.522627 | 2_2:-23799686 | Msa0244940:CDS |
| TTGCTTTCACTGATGCTCAA+AGG | 0.524988 | 2_2:-23801835 | Msa0244940:CDS |
| ATGCTAAGAGGTTAATTGGT+AGG | 0.525498 | 2_2:-23800915 | Msa0244940:CDS |
| CGATAACCAATGACAAAGAA+AGG | 0.526916 | 2_2:-23799610 | Msa0244940:CDS |
| GTCTAGGATTCCAAAAGTGC+AGG | 0.534926 | 2_2:-23800092 | Msa0244940:CDS |
| GAACATCTACTTCATTCCCC+TGG | 0.535646 | 2_2:+23799360 | None:intergenic |
| ACTAGCCAGTCTTGATTACA+AGG | 0.537318 | 2_2:+23799297 | None:intergenic |
| GAGGTGAGTGTTTCCAGAAG+TGG | 0.537456 | 2_2:+23800450 | None:intergenic |
| AAAGGTACAGAAGTGTTCCT+AGG | 0.538214 | 2_2:+23799869 | None:intergenic |
| ACCCTCACAAACTACAATCA+AGG | 0.539796 | 2_2:+23799799 | None:intergenic |
| AGCAATGGCACCAGCATCCA+TGG | 0.539868 | 2_2:+23800645 | None:intergenic |
| TGCCTTGATTGTAGTTTGTG+AGG | 0.542190 | 2_2:-23799801 | Msa0244940:CDS |
| GACGTTACCCCATTGTCACT+TGG | 0.546373 | 2_2:-23799932 | Msa0244940:CDS |
| GTGAGTGACAACAACATGCT+TGG | 0.547808 | 2_2:-23799764 | Msa0244940:CDS |
| CGTGCAGTGGGAATCGACCT+TGG | 0.550120 | 2_2:-23801953 | Msa0244940:CDS |
| TTGTAGTTTGTGAGGGTGAG+AGG | 0.551491 | 2_2:-23799793 | Msa0244940:CDS |
| AGAGGCTTATTTGGAATCAC+CGG | 0.553942 | 2_2:-23800725 | Msa0244940:CDS |
| GTTCTTGAGGATCATCTGAA+AGG | 0.557323 | 2_2:-23799341 | Msa0244940:CDS |
| CTTGAAAGACACACAAACTT+CGG | 0.559044 | 2_2:-23802235 | Msa0244940:five_prime_UTR |
| GATCTCATTCTTACTTCCAG+TGG | 0.560329 | 2_2:+23799634 | None:intergenic |
| AAACAGCCCCTCGAAAACTT+CGG | 0.562562 | 2_2:-23802295 | None:intergenic |
| TCTGCAGAGGAAAGATCCAC+TGG | 0.563089 | 2_2:-23799650 | Msa0244940:CDS |
| ACATGATATTGTTCTTGTCG+GGG | 0.563522 | 2_2:-23800119 | Msa0244940:CDS |
| GAAAGGGCTTGAGAGTATGT+TGG | 0.565506 | 2_2:-23799324 | Msa0244940:CDS |
| GAACACCTTGTAATCAAGAC+TGG | 0.565696 | 2_2:-23799302 | Msa0244940:CDS |
| AAACATGAAGGTCGTGCAGT+GGG | 0.567739 | 2_2:-23801965 | Msa0244940:CDS |
| GATTGTTGAAAGTTGTCTTG+TGG | 0.568361 | 2_2:-23800167 | Msa0244940:CDS |
| CAATCTCCTTCATGTTTGTG+AGG | 0.570747 | 2_2:+23800749 | None:intergenic |
| GCGTAACTTCTTCAATGGGA+AGG | 0.571597 | 2_2:-23800062 | Msa0244940:CDS |
| TACGATTAGTGTTAAGTACA+AGG | 0.571844 | 2_2:-23800815 | Msa0244940:CDS |
| GGAATTTCTCATCTTCAGCA+TGG | 0.578307 | 2_2:+23799540 | None:intergenic |
| TGTAGTTTGTGAGGGTGAGA+GGG | 0.579578 | 2_2:-23799792 | Msa0244940:CDS |
| CATGATATTGTTCTTGTCGG+GGG | 0.579632 | 2_2:-23800118 | Msa0244940:CDS |
| TAGTGTTAAGTACAAGGGTG+AGG | 0.581461 | 2_2:-23800809 | Msa0244940:CDS |
| ACTGATGCTCAAAGGTTGGT+CGG | 0.583319 | 2_2:-23801827 | Msa0244940:CDS |
| ACTTCTGGAAACACTCACCT+CGG | 0.583908 | 2_2:-23800448 | Msa0244940:CDS |
| TTGCTGGCCTTAACGTTGTG+AGG | 0.589688 | 2_2:-23800627 | Msa0244940:CDS |
| GAATAGAAATATACCAAAGA+CGG | 0.590465 | 2_2:+23801763 | None:intergenic |
| ACCGAGATACCAAGTGACAA+TGG | 0.590955 | 2_2:+23799923 | None:intergenic |
| TTGTACTTAACACTAATCGT+AGG | 0.591476 | 2_2:+23800817 | None:intergenic |
| GGCTCTTGTGATTGAACGAG+AGG | 0.591760 | 2_2:+23802122 | None:intergenic |
| CTGAAGATGAGAAATTCCTA+AGG | 0.592200 | 2_2:-23799535 | Msa0244940:CDS |
| ATATGCAATAGCTGCAGCAG+TGG | 0.594040 | 2_2:+23800591 | None:intergenic |
| CATCTTAACTGTTTCTGCAG+AGG | 0.599860 | 2_2:-23799663 | Msa0244940:CDS |
| CTTCATGTTTGTGAGGACAA+TGG | 0.600128 | 2_2:+23800756 | None:intergenic |
| AGAACAAAGTGGATATCACT+AGG | 0.600332 | 2_2:-23800369 | Msa0244940:CDS |
| TATGCAATAGCTGCAGCAGT+GGG | 0.602359 | 2_2:+23800592 | None:intergenic |
| GACAATGGATGAGATTTCCT+CGG | 0.602552 | 2_2:+23800771 | None:intergenic |
| AGATGAGAAATTCCTAAGGA+AGG | 0.602756 | 2_2:-23799531 | Msa0244940:CDS |
| CACATGAATATGTTGTTCCA+AGG | 0.603031 | 2_2:+23801936 | None:intergenic |
| CATTGTCCTCACAAACATGA+AGG | 0.603324 | 2_2:-23800755 | Msa0244940:CDS |
| TTGCTTCATAAGAATAACCA+GGG | 0.605023 | 2_2:-23799377 | Msa0244940:CDS |
| GATAGCAAAGCATACATCCA+AGG | 0.607442 | 2_2:+23799697 | None:intergenic |
| CACAACGTTAAGGCCAGCAA+TGG | 0.608818 | 2_2:+23800630 | None:intergenic |
| ATTTAATAGGAAGAACAAAG+TGG | 0.609345 | 2_2:-23800380 | Msa0244940:CDS |
| GGAACAACATATTCATGTGT+TGG | 0.609685 | 2_2:-23801932 | Msa0244940:CDS |
| TTTGCTTCATAAGAATAACC+AGG | 0.610100 | 2_2:-23799378 | Msa0244940:CDS |
| AGACATCACCTTTAATTGTG+AGG | 0.611395 | 2_2:+23800485 | None:intergenic |
| GAATGAAGTAGATGTTCTTG+AGG | 0.618161 | 2_2:-23799354 | Msa0244940:CDS |
| ATAGCAAAGCATACATCCAA+GGG | 0.619096 | 2_2:+23799698 | None:intergenic |
| TTCTCAGCGAAAAGCCACCA+TGG | 0.620029 | 2_2:-23800662 | Msa0244940:CDS |
| AAAACATGAAGGTCGTGCAG+TGG | 0.622170 | 2_2:-23801966 | Msa0244940:CDS |
| TTCTGGAAACACTCACCTCG+GGG | 0.622900 | 2_2:-23800446 | Msa0244940:CDS |
| CAAAGCATACATCCAAGGGA+TGG | 0.629656 | 2_2:+23799702 | None:intergenic |
| CAAGTTTGAAGAAATCAACA+TGG | 0.636916 | 2_2:-23800212 | Msa0244940:CDS |
| CATAAGCAACAGCCTCATCA+GGG | 0.640869 | 2_2:+23800020 | None:intergenic |
| AGGTTGGACAAAATTTGCAG+TGG | 0.644500 | 2_2:-23799189 | Msa0244940:three_prime_UTR |
| AGAAGTTCTCAACCTCCTCA+AGG | 0.646239 | 2_2:+23800336 | None:intergenic |
| GAGCCAGCACAAGAAAACAA+AGG | 0.647648 | 2_2:-23802104 | Msa0244940:intron |
| GGAGAAGCTCCTTTGTGCCG+AGG | 0.650523 | 2_2:-23800788 | Msa0244940:CDS |
| GACAAAAGAAGTAATTGTGA+TGG | 0.650690 | 2_2:-23800562 | Msa0244940:CDS |
| ACACCAGCAATAGCCTTGAA+CGG | 0.652360 | 2_2:+23800850 | None:intergenic |
| ATGAGATTTCCTCGGCACAA+AGG | 0.653122 | 2_2:+23800779 | None:intergenic |
| CTAGGAATCCAAGAGCCTTG+AGG | 0.655232 | 2_2:-23800351 | Msa0244940:CDS |
| CAAGAGCATCAACCCTGATG+AGG | 0.657948 | 2_2:-23800032 | Msa0244940:CDS |
| GAAATTCCTAAGGAAGGCCA+AGG | 0.662766 | 2_2:-23799525 | Msa0244940:CDS |
| GGAATCCAAGAGCCTTGAGG+AGG | 0.663076 | 2_2:-23800348 | Msa0244940:CDS |
| GATCAATCGTGCAATTACTG+TGG | 0.674376 | 2_2:-23799408 | Msa0244940:CDS |
| ACGATTAGTGTTAAGTACAA+GGG | 0.676520 | 2_2:-23800814 | Msa0244940:CDS |
| TAATGATCGTATTATGAGTG+TGG | 0.677159 | 2_2:-23799897 | Msa0244940:CDS |
| AAACATGAAGGAGATTGCAG+AGG | 0.695775 | 2_2:-23800743 | Msa0244940:CDS |
| TCAGTGAAAGCAACAAACGA+AGG | 0.703347 | 2_2:+23801845 | None:intergenic |
| ACATCCAAGGGATGGCCACG+AGG | 0.704531 | 2_2:+23799710 | None:intergenic |
| GATGCTCAAAGGTTGGTCGG+TGG | 0.706549 | 2_2:-23801824 | Msa0244940:CDS |
| CGAGATACCAAGTGACAATG+GGG | 0.706870 | 2_2:+23799925 | None:intergenic |
| GGTCTTCCAAGTGTTCCTCG+TGG | 0.707924 | 2_2:-23799725 | Msa0244940:CDS |
| TGCTTCATAAGAATAACCAG+GGG | 0.713870 | 2_2:-23799376 | Msa0244940:CDS |
| TCTGGAAACACTCACCTCGG+GGG | 0.720115 | 2_2:-23800445 | Msa0244940:CDS |
| AATGGCACCAGCATCCATGG+TGG | 0.736459 | 2_2:+23800648 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTTTTAAATTGTTAAAT+TGG | + | chr2_2:23799753-23799772 | None:intergenic | 10.0% |
| !!! | TATATATATTAGTATTTTGA+AGG | - | chr2_2:23802180-23802199 | Msa0244940:five_prime_UTR | 10.0% |
| !!! | TAAAAATTGTTATTTGAGTT+AGG | - | chr2_2:23799764-23799783 | Msa0244940:CDS | 15.0% |
| !! | TAAAGAAAAACAATTTCTTT+GGG | + | chr2_2:23799979-23799998 | None:intergenic | 15.0% |
| !! | ATAGATGGATAAATAAATAA+AGG | - | chr2_2:23800175-23800194 | Msa0244940:CDS | 15.0% |
| !! | ATGAATTAATATATATGTAG+CGG | - | chr2_2:23800301-23800320 | Msa0244940:CDS | 15.0% |
| !! | ATGAGTGAATATTAAAAGAT+TGG | + | chr2_2:23799653-23799672 | None:intergenic | 20.0% |
| !!! | TGATTCTTTATTTTCAAATG+TGG | - | chr2_2:23799803-23799822 | Msa0244940:CDS | 20.0% |
| !! | GTAAAGAAAAACAATTTCTT+TGG | + | chr2_2:23799980-23799999 | None:intergenic | 20.0% |
| !!! | TTAAAGTTGATCATAATAGA+TGG | - | chr2_2:23800160-23800179 | Msa0244940:CDS | 20.0% |
| !!! | AATATATCTTTTTGAACAAC+GGG | + | chr2_2:23800512-23800531 | None:intergenic | 20.0% |
| !!! | CAATATATCTTTTTGAACAA+CGG | + | chr2_2:23800513-23800532 | None:intergenic | 20.0% |
| !! | TTCAAAAAGATATATTGTTG+TGG | - | chr2_2:23800516-23800535 | Msa0244940:CDS | 20.0% |
| !!! | AATATTTTTGTCTTTGATCT+TGG | - | chr2_2:23800857-23800876 | Msa0244940:CDS | 20.0% |
| !! | TAAATAATCAATCTCAATAG+TGG | + | chr2_2:23801119-23801138 | None:intergenic | 20.0% |
| !! | TGAGATTGATTATTTATATG+AGG | - | chr2_2:23801123-23801142 | Msa0244940:intron | 20.0% |
| !!! | TATCTTTAGAAGTAAGATAT+TGG | + | chr2_2:23801558-23801577 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTTTGAGAAGAA+AGG | + | chr2_2:23801960-23801979 | None:intergenic | 20.0% |
| !!! | TATATTAGTATTTTGAAGGT+TGG | - | chr2_2:23802184-23802203 | Msa0244940:five_prime_UTR | 20.0% |
| ! | TTTAAATTTGGTCTATGCTA+TGG | + | chr2_2:23799132-23799151 | None:intergenic | 25.0% |
| !! | GTCTTTCAAGCTTTTAAATT+TGG | + | chr2_2:23799144-23799163 | None:intergenic | 25.0% |
| ! | TTTAAATTTGGTCTATGCTA+TGG | + | chr2_2:23799132-23799151 | None:intergenic | 25.0% |
| !! | GTCTTTCAAGCTTTTAAATT+TGG | + | chr2_2:23799144-23799163 | None:intergenic | 25.0% |
| ! | TTTGTATACCTGAAAGATTA+TGG | - | chr2_2:23799396-23799415 | Msa0244940:CDS | 25.0% |
| !!! | TTTTTTTGCCATAATCTTTC+AGG | + | chr2_2:23799407-23799426 | None:intergenic | 25.0% |
| ! | ATTATGGCAAAAAAACATGA+AGG | - | chr2_2:23799412-23799431 | Msa0244940:CDS | 25.0% |
| ! | GAATAGAAATATACCAAAGA+CGG | + | chr2_2:23799629-23799648 | None:intergenic | 25.0% |
| !!! | ACTTTTGAAACTACAATATG+TGG | + | chr2_2:23800097-23800116 | None:intergenic | 25.0% |
| !! | ATATATCTTTTTGAACAACG+GGG | + | chr2_2:23800511-23800530 | None:intergenic | 25.0% |
| ! | ACTTTGTGCAAGAATTTAAT+AGG | - | chr2_2:23800996-23801015 | Msa0244940:intron | 25.0% |
| ! | ATTTAATAGGAAGAACAAAG+TGG | - | chr2_2:23801009-23801028 | Msa0244940:intron | 25.0% |
| ! | TCTTCATACACTCATTAAAA+AGG | + | chr2_2:23801204-23801223 | None:intergenic | 25.0% |
| !! | AAAATTGATTCAAGAAGCTA+AGG | - | chr2_2:23801822-23801841 | Msa0244940:CDS | 25.0% |
| ATTCACTCATATTGTAGCTT+AGG | - | chr2_2:23799663-23799682 | Msa0244940:CDS | 30.0% | |
| ATAAAGTTATGTTGTGACAG+TGG | - | chr2_2:23799832-23799851 | Msa0244940:CDS | 30.0% | |
| ATAGGTCGTAAGTTAGATTA+TGG | - | chr2_2:23800361-23800380 | Msa0244940:CDS | 30.0% | |
| TATGACCATGTTAAAGAAAC+AGG | - | chr2_2:23800411-23800430 | Msa0244940:CDS | 30.0% | |
| ! | ATTCACCTGTTTCTTTAACA+TGG | + | chr2_2:23800419-23800438 | None:intergenic | 30.0% |
| !!! | TTTTTTCTTCAGATGCTAAG+AGG | - | chr2_2:23800462-23800481 | Msa0244940:CDS | 30.0% |
| TTGTACTTAACACTAATCGT+AGG | + | chr2_2:23800575-23800594 | None:intergenic | 30.0% | |
| TACGATTAGTGTTAAGTACA+AGG | - | chr2_2:23800574-23800593 | Msa0244940:CDS | 30.0% | |
| ACGATTAGTGTTAAGTACAA+GGG | - | chr2_2:23800575-23800594 | Msa0244940:CDS | 30.0% | |
| TGAGAATCGTTAAAATAAGC+AGG | + | chr2_2:23800713-23800732 | None:intergenic | 30.0% | |
| ! | CACAATTACTTCTTTTGTCA+AGG | + | chr2_2:23800826-23800845 | None:intergenic | 30.0% |
| GACAAAAGAAGTAATTGTGA+TGG | - | chr2_2:23800827-23800846 | Msa0244940:CDS | 30.0% | |
| ! | ATTTTTGTCTTTGATCTTGG+TGG | - | chr2_2:23800860-23800879 | Msa0244940:CDS | 30.0% |
| CAAGTTTGAAGAAATCAACA+TGG | - | chr2_2:23801177-23801196 | Msa0244940:intron | 30.0% | |
| GTACATGATATTGTTCTTGT+CGG | - | chr2_2:23801268-23801287 | Msa0244940:intron | 30.0% | |
| TACATGATATTGTTCTTGTC+GGG | - | chr2_2:23801269-23801288 | Msa0244940:intron | 30.0% | |
| TATTGCGTAACTTCTTCAAT+GGG | - | chr2_2:23801323-23801342 | Msa0244940:intron | 30.0% | |
| CATTAAGAATGTTCCAAACT+TGG | - | chr2_2:23801426-23801445 | Msa0244940:intron | 30.0% | |
| TAATGATCGTATTATGAGTG+TGG | - | chr2_2:23801492-23801511 | Msa0244940:intron | 30.0% | |
| TTTAGAAGTAAGATATTGGC+TGG | + | chr2_2:23801554-23801573 | None:intergenic | 30.0% | |
| !! | CAATTTTTCAATTTCGACTC+TGG | + | chr2_2:23801809-23801828 | None:intergenic | 30.0% |
| ATCTAATGCATTCATTACCT+TGG | + | chr2_2:23801884-23801903 | None:intergenic | 30.0% | |
| ATGACTGCATTTACAAGTTA+AGG | - | chr2_2:23801902-23801921 | Msa0244940:CDS | 30.0% | |
| !! | AAGGAATGCTCTAAAGAATA+AGG | - | chr2_2:23801921-23801940 | Msa0244940:CDS | 30.0% |
| TTTGCTTCATAAGAATAACC+AGG | - | chr2_2:23802011-23802030 | Msa0244940:intron | 30.0% | |
| TTGCTTCATAAGAATAACCA+GGG | - | chr2_2:23802012-23802031 | Msa0244940:intron | 30.0% | |
| CTTGAAAGACACACAAACTT+CGG | - | chr2_2:23799154-23799173 | Msa0244940:three_prime_UTR | 35.0% | |
| CACATGAATATGTTGTTCCA+AGG | + | chr2_2:23799456-23799475 | None:intergenic | 35.0% | |
| GGAACAACATATTCATGTGT+TGG | - | chr2_2:23799457-23799476 | Msa0244940:CDS | 35.0% | |
| ! | CATATTCATGTGTTGGTGTT+TGG | - | chr2_2:23799464-23799483 | Msa0244940:CDS | 35.0% |
| TTCTTTACTTCGACACTTCT+TGG | - | chr2_2:23799992-23800011 | Msa0244940:CDS | 35.0% | |
| CTGACTGTATAACACATAAG+AGG | - | chr2_2:23800023-23800042 | Msa0244940:CDS | 35.0% | |
| TCAGATGCTAAGAGGTTAAT+TGG | - | chr2_2:23800470-23800489 | Msa0244940:CDS | 35.0% | |
| ATGCTAAGAGGTTAATTGGT+AGG | - | chr2_2:23800474-23800493 | Msa0244940:CDS | 35.0% | |
| ! | GTGACAACTGCATTTTTAAC+CGG | + | chr2_2:23800686-23800705 | None:intergenic | 35.0% |
| TGATTATCCTCACAACGTTA+AGG | + | chr2_2:23800772-23800791 | None:intergenic | 35.0% | |
| AGACATCACCTTTAATTGTG+AGG | + | chr2_2:23800907-23800926 | None:intergenic | 35.0% | |
| ! | TTTGAAGTTAAAGCCACTTC+TGG | - | chr2_2:23800926-23800945 | Msa0244940:intron | 35.0% |
| AGAACAAAGTGGATATCACT+AGG | - | chr2_2:23801020-23801039 | Msa0244940:intron | 35.0% | |
| GTTGAGAACTTCTTGTGAAA+AGG | - | chr2_2:23801063-23801082 | Msa0244940:intron | 35.0% | |
| AAGGACACTCTCTTTCAAAT+TGG | - | chr2_2:23801090-23801109 | Msa0244940:intron | 35.0% | |
| GATTGTTGAAAGTTGTCTTG+TGG | - | chr2_2:23801222-23801241 | Msa0244940:intron | 35.0% | |
| ACATGATATTGTTCTTGTCG+GGG | - | chr2_2:23801270-23801289 | Msa0244940:intron | 35.0% | |
| CTATTGCGTAACTTCTTCAA+TGG | - | chr2_2:23801322-23801341 | Msa0244940:intron | 35.0% | |
| ! | CTACAATCAAGGCACTATAT+TGG | + | chr2_2:23801582-23801601 | None:intergenic | 35.0% |
| !!! | CTTGGTTTTTTCAGTCTTTC+CGG | - | chr2_2:23801643-23801662 | Msa0244940:intron | 35.0% |
| ATAGCAAAGCATACATCCAA+GGG | + | chr2_2:23801694-23801713 | None:intergenic | 35.0% | |
| ! | TGCTTTGCTATCGATGAAAA+CGG | - | chr2_2:23801703-23801722 | Msa0244940:intron | 35.0% |
| CGATAACCAATGACAAAGAA+AGG | - | chr2_2:23801779-23801798 | Msa0244940:CDS | 35.0% | |
| GGATAACCTTTCTTTGTCAT+TGG | + | chr2_2:23801788-23801807 | None:intergenic | 35.0% | |
| CTGAAGATGAGAAATTCCTA+AGG | - | chr2_2:23801854-23801873 | Msa0244940:CDS | 35.0% | |
| AGATGAGAAATTCCTAAGGA+AGG | - | chr2_2:23801858-23801877 | Msa0244940:CDS | 35.0% | |
| TGCTTCATAAGAATAACCAG+GGG | - | chr2_2:23802013-23802032 | Msa0244940:intron | 35.0% | |
| GAATGAAGTAGATGTTCTTG+AGG | - | chr2_2:23802035-23802054 | Msa0244940:intron | 35.0% | |
| TTCTTGAGGATCATCTGAAA+GGG | - | chr2_2:23802049-23802068 | Msa0244940:intron | 35.0% | |
| ! | ACAGTCTTTTAGCACAAGAT+TGG | + | chr2_2:23802279-23802298 | None:intergenic | 35.0% |
| !!! | CTACCTTTGTTTTCTTGTGC+TGG | + | chr2_2:23799291-23799310 | None:intergenic | 40.0% |
| ! | TTCATGTGTTGGTGTTTGGT+TGG | - | chr2_2:23799468-23799487 | Msa0244940:CDS | 40.0% |
| GAGATTATCCACAACGATGA+AGG | - | chr2_2:23799508-23799527 | Msa0244940:CDS | 40.0% | |
| ! | TTTTGTTGCCTTCATCGTTG+TGG | + | chr2_2:23799519-23799538 | None:intergenic | 40.0% |
| TCAGTGAAAGCAACAAACGA+AGG | + | chr2_2:23799547-23799566 | None:intergenic | 40.0% | |
| TTGCTTTCACTGATGCTCAA+AGG | - | chr2_2:23799554-23799573 | Msa0244940:CDS | 40.0% | |
| TTTCACTGATGCTCAAAGGT+TGG | - | chr2_2:23799558-23799577 | Msa0244940:CDS | 40.0% | |
| CACGTCCTAGATTCAAAGAT+GGG | - | chr2_2:23799719-23799738 | Msa0244940:CDS | 40.0% | |
| CTTCACCCATCTTTGAATCT+AGG | + | chr2_2:23799727-23799746 | None:intergenic | 40.0% | |
| GCTTCATAGGTTACGACATT+GGG | + | chr2_2:23799870-23799889 | None:intergenic | 40.0% | |
| TGCTTCATAGGTTACGACAT+TGG | + | chr2_2:23799871-23799890 | None:intergenic | 40.0% | |
| !! | TAGAGGTGTCTATGCTTCAT+AGG | + | chr2_2:23799883-23799902 | None:intergenic | 40.0% |
| TATGAAGCATAGACACCTCT+AGG | - | chr2_2:23799882-23799901 | Msa0244940:CDS | 40.0% | |
| TGTGTTATACAGTCAGACAC+CGG | + | chr2_2:23800019-23800038 | None:intergenic | 40.0% | |
| ATAACACATAAGAGGCGAGT+TGG | - | chr2_2:23800031-23800050 | Msa0244940:CDS | 40.0% | |
| GGACAATTCAGACAAATGTC+TGG | - | chr2_2:23800052-23800071 | Msa0244940:CDS | 40.0% | |
| TCAAGAAACGTTGATCAACG+AGG | - | chr2_2:23800127-23800146 | Msa0244940:CDS | 40.0% | |
| CAAGAAACGTTGATCAACGA+GGG | - | chr2_2:23800128-23800147 | Msa0244940:CDS | 40.0% | |
| AACTTACGACCTATGAAGCA+TGG | + | chr2_2:23800355-23800374 | None:intergenic | 40.0% | |
| TATATTGTTGTGGCCGTTCA+AGG | - | chr2_2:23800526-23800545 | Msa0244940:CDS | 40.0% | |
| TAGTGTTAAGTACAAGGGTG+AGG | - | chr2_2:23800580-23800599 | Msa0244940:CDS | 40.0% | |
| GACAATGGATGAGATTTCCT+CGG | + | chr2_2:23800621-23800640 | None:intergenic | 40.0% | |
| CTTCATGTTTGTGAGGACAA+TGG | + | chr2_2:23800636-23800655 | None:intergenic | 40.0% | |
| CATTGTCCTCACAAACATGA+AGG | - | chr2_2:23800634-23800653 | Msa0244940:CDS | 40.0% | |
| CAATCTCCTTCATGTTTGTG+AGG | + | chr2_2:23800643-23800662 | None:intergenic | 40.0% | |
| AAACATGAAGGAGATTGCAG+AGG | - | chr2_2:23800646-23800665 | Msa0244940:CDS | 40.0% | |
| ! | AGAGGCTTATTTGGAATCAC+CGG | - | chr2_2:23800664-23800683 | Msa0244940:CDS | 40.0% |
| TTTGTCTTTGATCTTGGTGG+TGG | - | chr2_2:23800863-23800882 | Msa0244940:CDS | 40.0% | |
| ! | TTGTCTTTGATCTTGGTGGT+GGG | - | chr2_2:23800864-23800883 | Msa0244940:CDS | 40.0% |
| GTGTCTCTCCTCACAATTAA+AGG | - | chr2_2:23800896-23800915 | Msa0244940:CDS | 40.0% | |
| CTTCTTGTGAAAAGGCGAAA+AGG | - | chr2_2:23801071-23801090 | Msa0244940:intron | 40.0% | |
| CATGATATTGTTCTTGTCGG+GGG | - | chr2_2:23801271-23801290 | Msa0244940:intron | 40.0% | |
| TTATGAGTGTGGTGATTCCT+AGG | - | chr2_2:23801503-23801522 | Msa0244940:intron | 40.0% | |
| !! | AAAGGTACAGAAGTGTTCCT+AGG | + | chr2_2:23801523-23801542 | None:intergenic | 40.0% |
| !! | TATTGGCTGGTCTTCTTGAA+AGG | + | chr2_2:23801541-23801560 | None:intergenic | 40.0% |
| ! | TGCCTTGATTGTAGTTTGTG+AGG | - | chr2_2:23801588-23801607 | Msa0244940:intron | 40.0% |
| ! | GCCTTGATTGTAGTTTGTGA+GGG | - | chr2_2:23801589-23801608 | Msa0244940:intron | 40.0% |
| ACCCTCACAAACTACAATCA+AGG | + | chr2_2:23801593-23801612 | None:intergenic | 40.0% | |
| GATAGCAAAGCATACATCCA+AGG | + | chr2_2:23801695-23801714 | None:intergenic | 40.0% | |
| !! | CATCTTAACTGTTTCTGCAG+AGG | - | chr2_2:23801726-23801745 | Msa0244940:intron | 40.0% |
| GATCTCATTCTTACTTCCAG+TGG | + | chr2_2:23801758-23801777 | None:intergenic | 40.0% | |
| GGAATTTCTCATCTTCAGCA+TGG | + | chr2_2:23801852-23801871 | None:intergenic | 40.0% | |
| GATCAATCGTGCAATTACTG+TGG | - | chr2_2:23801981-23802000 | Msa0244940:intron | 40.0% | |
| GTTCTTGAGGATCATCTGAA+AGG | - | chr2_2:23802048-23802067 | Msa0244940:intron | 40.0% | |
| GAACACCTTGTAATCAAGAC+TGG | - | chr2_2:23802087-23802106 | Msa0244940:intron | 40.0% | |
| ACTAGCCAGTCTTGATTACA+AGG | + | chr2_2:23802095-23802114 | None:intergenic | 40.0% | |
| !!! | GACTGGCTAGTTTTCTTCAT+CGG | - | chr2_2:23802104-23802123 | Msa0244940:intron | 40.0% |
| AGGTTGGACAAAATTTGCAG+TGG | - | chr2_2:23802200-23802219 | Msa0244940:five_prime_UTR | 40.0% | |
| ! | CAAGATTGGCATGGTAATGT+TGG | + | chr2_2:23802265-23802284 | None:intergenic | 40.0% |
| ! | CTTTTAGCACAAGATTGGCA+TGG | + | chr2_2:23802274-23802293 | None:intergenic | 40.0% |
| GAGCCAGCACAAGAAAACAA+AGG | - | chr2_2:23799285-23799304 | Msa0244940:exon | 45.0% | |
| AAAACATGAAGGTCGTGCAG+TGG | - | chr2_2:23799423-23799442 | Msa0244940:CDS | 45.0% | |
| AAACATGAAGGTCGTGCAGT+GGG | - | chr2_2:23799424-23799443 | Msa0244940:CDS | 45.0% | |
| ! | ACTGATGCTCAAAGGTTGGT+CGG | - | chr2_2:23799562-23799581 | Msa0244940:CDS | 45.0% |
| AACGCACAAAACACCGTCTT+TGG | - | chr2_2:23799613-23799632 | Msa0244940:CDS | 45.0% | |
| GCACGTCCTAGATTCAAAGA+TGG | - | chr2_2:23799718-23799737 | Msa0244940:CDS | 45.0% | |
| ACGTGTCATGCGAATGTCAT+AGG | + | chr2_2:23799934-23799953 | None:intergenic | 45.0% | |
| TACTTCGACACTTCTTGGAC+CGG | - | chr2_2:23799997-23800016 | Msa0244940:CDS | 45.0% | |
| TTCGTGTCAAGTGTTTGCGT+TGG | - | chr2_2:23800326-23800345 | Msa0244940:CDS | 45.0% | |
| ! | ACACCAGCAATAGCCTTGAA+CGG | + | chr2_2:23800542-23800561 | None:intergenic | 45.0% |
| ATGAGATTTCCTCGGCACAA+AGG | + | chr2_2:23800613-23800632 | None:intergenic | 45.0% | |
| GGAGATTGCAGAGGCTTATT+TGG | - | chr2_2:23800655-23800674 | Msa0244940:CDS | 45.0% | |
| TATGCAATAGCTGCAGCAGT+GGG | + | chr2_2:23800800-23800819 | None:intergenic | 45.0% | |
| ATATGCAATAGCTGCAGCAG+TGG | + | chr2_2:23800801-23800820 | None:intergenic | 45.0% | |
| ACTGCTGCAGCTATTGCATA+TGG | - | chr2_2:23800800-23800819 | Msa0244940:CDS | 45.0% | |
| ! | ACTTCTGGAAACACTCACCT+CGG | - | chr2_2:23800941-23800960 | Msa0244940:intron | 45.0% |
| AGAAGTTCTCAACCTCCTCA+AGG | + | chr2_2:23801056-23801075 | None:intergenic | 45.0% | |
| ! | GTCTAGGATTCCAAAAGTGC+AGG | - | chr2_2:23801297-23801316 | Msa0244940:intron | 45.0% |
| ! | CGCAATAGTTCCTGCACTTT+TGG | + | chr2_2:23801310-23801329 | None:intergenic | 45.0% |
| GCGTAACTTCTTCAATGGGA+AGG | - | chr2_2:23801327-23801346 | Msa0244940:intron | 45.0% | |
| CATAAGCAACAGCCTCATCA+GGG | + | chr2_2:23801372-23801391 | None:intergenic | 45.0% | |
| ! | CTGATGAGGCTGTTGCTTAT+GGG | - | chr2_2:23801371-23801390 | Msa0244940:intron | 45.0% |
| ! | TGATGAGGCTGTTGCTTATG+GGG | - | chr2_2:23801372-23801391 | Msa0244940:intron | 45.0% |
| CGAGATACCAAGTGACAATG+GGG | + | chr2_2:23801467-23801486 | None:intergenic | 45.0% | |
| CCGAGATACCAAGTGACAAT+GGG | + | chr2_2:23801468-23801487 | None:intergenic | 45.0% | |
| ! | CCCATTGTCACTTGGTATCT+CGG | - | chr2_2:23801465-23801484 | Msa0244940:intron | 45.0% |
| ACCGAGATACCAAGTGACAA+TGG | + | chr2_2:23801469-23801488 | None:intergenic | 45.0% | |
| ! | TTGTAGTTTGTGAGGGTGAG+AGG | - | chr2_2:23801596-23801615 | Msa0244940:intron | 45.0% |
| ! | TGTAGTTTGTGAGGGTGAGA+GGG | - | chr2_2:23801597-23801616 | Msa0244940:intron | 45.0% |
| GTGAGTGACAACAACATGCT+TGG | - | chr2_2:23801625-23801644 | Msa0244940:intron | 45.0% | |
| CAAAGCATACATCCAAGGGA+TGG | + | chr2_2:23801690-23801709 | None:intergenic | 45.0% | |
| GAAATTCCTAAGGAAGGCCA+AGG | - | chr2_2:23801864-23801883 | Msa0244940:CDS | 45.0% | |
| ! | TCATTACCTTGGCCTTCCTT+AGG | + | chr2_2:23801873-23801892 | None:intergenic | 45.0% |
| GAACATCTACTTCATTCCCC+TGG | + | chr2_2:23802032-23802051 | None:intergenic | 45.0% | |
| ! | GAAAGGGCTTGAGAGTATGT+TGG | - | chr2_2:23802065-23802084 | Msa0244940:intron | 45.0% |
| GGCTCTTGTGATTGAACGAG+AGG | + | chr2_2:23799270-23799289 | None:intergenic | 50.0% | |
| !! | ACCTCTAGGACTACGTGTGT+CGG | - | chr2_2:23799896-23799915 | Msa0244940:CDS | 50.0% |
| CGTTGGAGTCCATGCTTCAT+AGG | - | chr2_2:23800343-23800362 | Msa0244940:CDS | 50.0% | |
| TTCTCAGCGAAAAGCCACCA+TGG | - | chr2_2:23800727-23800746 | Msa0244940:CDS | 50.0% | |
| CACAACGTTAAGGCCAGCAA+TGG | + | chr2_2:23800762-23800781 | None:intergenic | 50.0% | |
| !! | TTGCTGGCCTTAACGTTGTG+AGG | - | chr2_2:23800762-23800781 | Msa0244940:CDS | 50.0% |
| GAGGTGAGTGTTTCCAGAAG+TGG | + | chr2_2:23800942-23800961 | None:intergenic | 50.0% | |
| ! | CTTCTGGAAACACTCACCTC+GGG | - | chr2_2:23800942-23800961 | Msa0244940:intron | 50.0% |
| ! | TTCTGGAAACACTCACCTCG+GGG | - | chr2_2:23800943-23800962 | Msa0244940:intron | 50.0% |
| CTAGGAATCCAAGAGCCTTG+AGG | - | chr2_2:23801038-23801057 | Msa0244940:intron | 50.0% | |
| !! | CAAGAGCATCAACCCTGATG+AGG | - | chr2_2:23801357-23801376 | Msa0244940:intron | 50.0% |
| CCATAAGCAACAGCCTCATC+AGG | + | chr2_2:23801373-23801392 | None:intergenic | 50.0% | |
| ! | CCTGATGAGGCTGTTGCTTA+TGG | - | chr2_2:23801370-23801389 | Msa0244940:intron | 50.0% |
| GACGTTACCCCATTGTCACT+TGG | - | chr2_2:23801457-23801476 | Msa0244940:intron | 50.0% | |
| ACGAGGAACACTTGGAAGAC+CGG | + | chr2_2:23801665-23801684 | None:intergenic | 50.0% | |
| TCTGCAGAGGAAAGATCCAC+TGG | - | chr2_2:23801739-23801758 | Msa0244940:intron | 50.0% | |
| ! | GATGCTCAAAGGTTGGTCGG+TGG | - | chr2_2:23799565-23799584 | Msa0244940:CDS | 55.0% |
| !! | CCTCTAGGACTACGTGTGTC+GGG | - | chr2_2:23799897-23799916 | Msa0244940:CDS | 55.0% |
| TGGCCGTTCAAGGCTATTGC+TGG | - | chr2_2:23800536-23800555 | Msa0244940:CDS | 55.0% | |
| CGAAAAGCCACCATGGATGC+TGG | - | chr2_2:23800734-23800753 | Msa0244940:CDS | 55.0% | |
| AATGGCACCAGCATCCATGG+TGG | + | chr2_2:23800744-23800763 | None:intergenic | 55.0% | |
| AGCAATGGCACCAGCATCCA+TGG | + | chr2_2:23800747-23800766 | None:intergenic | 55.0% | |
| !! | ATGGATGCTGGTGCCATTGC+TGG | - | chr2_2:23800746-23800765 | Msa0244940:CDS | 55.0% |
| TCTGGAAACACTCACCTCGG+GGG | - | chr2_2:23800944-23800963 | Msa0244940:intron | 55.0% | |
| TATCAAAGTCCTCTCCCCCG+AGG | + | chr2_2:23800961-23800980 | None:intergenic | 55.0% | |
| GGAATCCAAGAGCCTTGAGG+AGG | - | chr2_2:23801041-23801060 | Msa0244940:intron | 55.0% | |
| CTCAACCTCCTCAAGGCTCT+TGG | + | chr2_2:23801049-23801068 | None:intergenic | 55.0% | |
| TTCTTGTCGGGGGATCGTCT+AGG | - | chr2_2:23801281-23801300 | Msa0244940:intron | 55.0% | |
| ACGTCTCGCAGCACCAAGTT+TGG | + | chr2_2:23801442-23801461 | None:intergenic | 55.0% | |
| GGTCTTCCAAGTGTTCCTCG+TGG | - | chr2_2:23801664-23801683 | Msa0244940:intron | 55.0% | |
| CGTGCAGTGGGAATCGACCT+TGG | - | chr2_2:23799436-23799455 | Msa0244940:CDS | 60.0% | |
| !! | GTTGGTCGGTGGTGCTGCTA+AGG | - | chr2_2:23799576-23799595 | Msa0244940:CDS | 60.0% |
| GTGCGCGTGTGAGTGTCAGA+TGG | + | chr2_2:23799702-23799721 | None:intergenic | 60.0% | |
| CCCGACACACGTAGTCCTAG+AGG | + | chr2_2:23799900-23799919 | None:intergenic | 60.0% | |
| GGAGAAGCTCCTTTGTGCCG+AGG | - | chr2_2:23800601-23800620 | Msa0244940:CDS | 60.0% | |
| AAACACTCACCTCGGGGGAG+AGG | - | chr2_2:23800949-23800968 | Msa0244940:intron | 60.0% | |
| GGATGGCCACGAGGAACACT+TGG | + | chr2_2:23801673-23801692 | None:intergenic | 60.0% | |
| TGTTCCTCGTGGCCATCCCT+TGG | - | chr2_2:23801675-23801694 | Msa0244940:intron | 60.0% | |
| ACATCCAAGGGATGGCCACG+AGG | + | chr2_2:23801682-23801701 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 23799108 | 23802303 | 23799108 | ID=Msa0244940;Name=Msa0244940 |
| chr2_2 | mRNA | 23799108 | 23802303 | 23799108 | ID=Msa0244940-mRNA-1;Parent=Msa0244940;Name=Msa0244940-mRNA-1;_AED=0.33;_eAED=0.33;_QI=202|1|1|1|0.5|0.33|3|190|619 |
| chr2_2 | exon | 23799108 | 23800937 | 23799108 | ID=Msa0244940-mRNA-1:exon:9209;Parent=Msa0244940-mRNA-1 |
| chr2_2 | exon | 23801777 | 23801999 | 23801777 | ID=Msa0244940-mRNA-1:exon:9208;Parent=Msa0244940-mRNA-1 |
| chr2_2 | exon | 23802105 | 23802303 | 23802105 | ID=Msa0244940-mRNA-1:exon:9207;Parent=Msa0244940-mRNA-1 |
| chr2_2 | five_prime_UTR | 23802105 | 23802303 | 23802105 | ID=Msa0244940-mRNA-1:five_prime_utr;Parent=Msa0244940-mRNA-1 |
| chr2_2 | five_prime_UTR | 23801997 | 23801999 | 23801997 | ID=Msa0244940-mRNA-1:five_prime_utr;Parent=Msa0244940-mRNA-1 |
| chr2_2 | CDS | 23801777 | 23801996 | 23801777 | ID=Msa0244940-mRNA-1:cds;Parent=Msa0244940-mRNA-1 |
| chr2_2 | CDS | 23799298 | 23800937 | 23799298 | ID=Msa0244940-mRNA-1:cds;Parent=Msa0244940-mRNA-1 |
| chr2_2 | three_prime_UTR | 23799108 | 23799297 | 23799108 | ID=Msa0244940-mRNA-1:three_prime_utr;Parent=Msa0244940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
