AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1258170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258170 MtrunA17_Chr4g0057031 98.141 269 5 0 1 269 1 269 0.0 547
Msa1258170 MtrunA17_Chr5g0434571 57.658 222 78 3 1 207 37 257 3.22e-85 258
Msa1258170 MtrunA17_Chr3g0110351 62.617 214 71 3 1 206 1 213 2.72e-84 254
Msa1258170 MtrunA17_Chr7g0228891 71.533 137 39 0 1 137 1 137 6.00e-72 222
Msa1258170 MtrunA17_Chr6g0453471 64.000 150 53 1 1 149 1 150 5.48e-67 212
Msa1258170 MtrunA17_Chr7g0217741 67.939 131 42 0 1 131 1 131 7.54e-67 210
Msa1258170 MtrunA17_Chr4g0042671 65.541 148 49 1 1 148 1 146 4.77e-66 211
Msa1258170 MtrunA17_Chr3g0115821 69.531 128 39 0 1 128 1 128 5.99e-66 209
Msa1258170 MtrunA17_Chr8g0349261 72.519 131 34 2 1 129 1 131 2.15e-65 206
Msa1258170 MtrunA17_Chr4g0039971 68.750 128 40 0 1 128 2 129 4.50e-65 207
Msa1258170 MtrunA17_Chr4g0037141 61.644 146 56 0 1 146 1 146 1.92e-64 203
Msa1258170 MtrunA17_Chr5g0410961 68.750 128 40 0 1 128 1 128 7.01e-64 203
Msa1258170 MtrunA17_Chr2g0281071 68.217 129 40 1 1 128 1 129 8.69e-64 203
Msa1258170 MtrunA17_Chr4g0048511 67.442 129 41 1 1 128 1 129 2.10e-63 202
Msa1258170 MtrunA17_Chr2g0323411 67.969 128 41 0 1 128 1 128 7.68e-63 200
Msa1258170 MtrunA17_Chr3g0131121 60.265 151 57 1 1 151 1 148 5.89e-62 197
Msa1258170 MtrunA17_Chr1g0193371 57.692 156 66 0 1 156 1 156 1.19e-61 198
Msa1258170 MtrunA17_Chr5g0435101 54.878 164 71 2 3 166 2 162 2.24e-61 192
Msa1258170 MtrunA17_Chr8g0385321 65.116 129 45 0 1 129 1 129 7.65e-61 194
Msa1258170 MtrunA17_Chr3g0103281 59.441 143 58 0 1 143 1 143 2.11e-59 191
Msa1258170 MtrunA17_Chr5g0395281 63.281 128 47 0 1 128 1 128 3.32e-59 190
Msa1258170 MtrunA17_Chr7g0270891 47.668 193 94 2 1 191 1 188 6.81e-59 191
Msa1258170 MtrunA17_Chr6g0452271 58.389 149 61 1 1 149 1 148 9.60e-59 190
Msa1258170 MtrunA17_Chr3g0117091 62.791 129 48 0 1 129 1 129 1.34e-58 190
Msa1258170 MtrunA17_Chr4g0058631 48.438 192 77 1 1 192 1 170 2.05e-58 190
Msa1258170 MtrunA17_Chr1g0193801 52.514 179 78 2 1 172 1 179 2.07e-58 191
Msa1258170 MtrunA17_Chr1g0211161 63.780 127 46 0 3 129 4 130 8.17e-58 184
Msa1258170 MtrunA17_Chr3g0121241 64.800 125 44 0 5 129 35 159 2.45e-56 183
Msa1258170 MtrunA17_Chr2g0309911 64.341 129 45 1 1 129 1 128 2.91e-56 183
Msa1258170 MtrunA17_Chr7g0261281 68.103 116 37 0 1 116 1 116 8.33e-56 181
Msa1258170 MtrunA17_Chr7g0271241 61.429 140 51 1 1 140 1 137 2.73e-55 182
Msa1258170 MtrunA17_Chr4g0044421 60.000 145 51 2 3 140 2 146 1.80e-54 174
Msa1258170 MtrunA17_Chr7g0274581 47.283 184 89 2 1 183 1 177 4.60e-54 174
Msa1258170 MtrunA17_Chr1g0187761 65.517 116 40 0 1 116 1 116 6.16e-54 175
Msa1258170 MtrunA17_Chr4g0068061 51.497 167 73 2 1 159 1 167 6.77e-54 177
Msa1258170 MtrunA17_Chr8g0342521 63.415 123 45 0 1 123 1 123 2.79e-53 176
Msa1258170 MtrunA17_Chr1g0167661 41.778 225 105 3 1 218 1 206 3.05e-53 173
Msa1258170 MtrunA17_Chr7g0217221 66.949 118 39 0 1 118 1 118 1.93e-52 172
Msa1258170 MtrunA17_Chr1g0167691 63.248 117 43 0 1 117 1 117 2.44e-52 171
Msa1258170 MtrunA17_Chr7g0275911 62.931 116 43 0 1 116 1 116 2.74e-52 171
Msa1258170 MtrunA17_Chr8g0342541 62.602 123 46 0 1 123 1 123 3.07e-52 173
Msa1258170 MtrunA17_Chr1g0203411 62.931 116 43 0 1 116 1 116 5.94e-52 171
Msa1258170 MtrunA17_Chr8g0346561 62.931 116 43 0 1 116 1 116 8.33e-52 171
Msa1258170 MtrunA17_Chr2g0330041 60.976 123 48 0 1 123 1 123 1.24e-51 173
Msa1258170 MtrunA17_Chr4g0060721 63.559 118 43 0 1 118 2 119 1.32e-51 171
Msa1258170 MtrunA17_Chr5g0417821 62.185 119 45 0 10 128 5 123 2.00e-51 169
Msa1258170 MtrunA17_Chr8g0342481 65.254 118 40 1 1 117 1 118 2.38e-51 172
Msa1258170 MtrunA17_Chr1g0194951 60.938 128 50 0 1 128 1 128 2.53e-51 172
Msa1258170 MtrunA17_Chr8g0387421 62.712 118 44 0 1 118 1 118 5.00e-51 169
Msa1258170 MtrunA17_Chr4g0022911 49.068 161 73 3 1 160 1 153 1.08e-50 168
Msa1258170 MtrunA17_Chr4g0022901 61.864 118 44 1 1 117 1 118 1.64e-50 167
Msa1258170 MtrunA17_Chr4g0070611 64.655 116 41 0 1 116 1 116 1.76e-50 168
Msa1258170 MtrunA17_Chr7g0254411 53.247 154 66 1 1 154 1 148 2.28e-50 168
Msa1258170 MtrunA17_Chr2g0311221 68.182 110 35 0 2 111 4 113 2.35e-50 168
Msa1258170 MtrunA17_Chr2g0323351 61.864 118 45 0 1 118 1 118 2.54e-50 166
Msa1258170 MtrunA17_Chr3g0092401 41.379 232 93 4 1 231 2 191 3.04e-50 167
Msa1258170 MtrunA17_Chr4g0070641 51.572 159 68 2 1 157 1 152 7.93e-50 162
Msa1258170 MtrunA17_Chr1g0151941 40.553 217 95 5 1 183 1 217 1.85e-49 163
Msa1258170 MtrunA17_Chr4g0022931 60.684 117 45 1 1 116 1 117 2.51e-49 164
Msa1258170 MtrunA17_Chr5g0397231 61.818 110 42 0 1 110 1 110 1.26e-47 161
Msa1258170 MtrunA17_Chr7g0269831 61.345 119 46 0 1 119 1 119 4.94e-47 160
Msa1258170 MtrunA17_Chr2g0328771 55.556 135 50 1 12 146 20 144 5.26e-47 159
Msa1258170 MtrunA17_Chr4g0032401 55.303 132 51 1 12 143 17 140 7.32e-47 159
Msa1258170 MtrunA17_Chr5g0400821 59.322 118 47 1 1 117 1 118 8.47e-47 158
Msa1258170 MtrunA17_Chr3g0135311 52.667 150 69 2 1 148 1 150 9.51e-47 159
Msa1258170 MtrunA17_Chr4g0028311 53.906 128 58 1 1 127 1 128 1.49e-46 158
Msa1258170 MtrunA17_Chr4g0022891 45.902 183 89 4 1 174 1 182 1.52e-46 155
Msa1258170 MtrunA17_Chr6g0453211 62.162 111 42 0 1 111 1 111 1.93e-46 157
Msa1258170 MtrunA17_Chr1g0152011 59.322 118 47 1 1 117 1 118 2.08e-46 158
Msa1258170 MtrunA17_Chr4g0022881 58.772 114 47 0 1 114 1 114 3.93e-46 154
Msa1258170 MtrunA17_Chr1g0186061 66.019 103 35 0 13 115 21 123 6.19e-46 154
Msa1258170 MtrunA17_Chr7g0264641 56.667 120 51 1 1 119 1 120 2.35e-45 153
Msa1258170 MtrunA17_Chr3g0088461 60.550 109 43 0 8 116 18 126 5.25e-45 154
Msa1258170 MtrunA17_Chr1g0168661 65.049 103 36 0 13 115 22 124 8.81e-45 152
Msa1258170 MtrunA17_Chr6g0470971 51.049 143 67 2 1 141 1 142 1.40e-44 152
Msa1258170 MtrunA17_Chr2g0327351 59.459 111 44 1 1 110 1 111 7.35e-44 151
Msa1258170 MtrunA17_Chr4g0072751 60.360 111 43 1 1 110 1 111 1.25e-43 151
Msa1258170 MtrunA17_Chr7g0247131 74.713 87 22 0 43 129 9 95 1.87e-43 148
Msa1258170 MtrunA17_Chr7g0228231 60.952 105 41 0 12 116 14 118 3.88e-43 145
Msa1258170 MtrunA17_Chr4g0054391 59.091 110 44 1 1 109 1 110 7.21e-43 147
Msa1258170 MtrunA17_Chr6g0450101 56.780 118 49 1 1 116 1 118 1.45e-42 144
Msa1258170 MtrunA17_Chr1g0194291 58.929 112 46 0 11 122 20 131 1.97e-42 145
Msa1258170 MtrunA17_Chr2g0327821 53.175 126 56 1 12 134 6 131 2.65e-42 144
Msa1258170 MtrunA17_Chr1g0203441 56.303 119 51 1 1 118 1 119 3.40e-42 145
Msa1258170 MtrunA17_Chr8g0354661 60.577 104 41 0 12 115 37 140 5.95e-42 150
Msa1258170 MtrunA17_Chr1g0209661 55.856 111 49 0 12 122 27 137 1.29e-41 145
Msa1258170 MtrunA17_Chr1g0194301 53.913 115 53 0 8 122 29 143 1.55e-41 144
Msa1258170 MtrunA17_Chr6g0487491 53.175 126 50 2 1 117 1 126 1.66e-41 143
Msa1258170 MtrunA17_Chr3g0099131 58.654 104 43 0 12 115 41 144 1.95e-40 146
Msa1258170 MtrunA17_Chr1g0180391 58.095 105 44 0 12 116 19 123 2.82e-40 139
Msa1258170 MtrunA17_Chr4g0030881 57.273 110 40 1 13 115 8 117 5.55e-40 139
Msa1258170 MtrunA17_Chr3g0080861 56.731 104 45 0 12 115 37 140 2.28e-39 143
Msa1258170 MtrunA17_Chr4g0055981 50.370 135 67 0 12 146 55 189 3.35e-39 136
Msa1258170 MtrunA17_Chr8g0343831 57.009 107 46 0 12 118 8 114 1.56e-38 135
Msa1258170 MtrunA17_Chr1g0154031 55.769 104 46 0 12 115 76 179 5.58e-38 138
Msa1258170 MtrunA17_Chr2g0293911 53.913 115 53 0 8 122 20 134 1.99e-37 134
Msa1258170 MtrunA17_Chr4g0068921 56.075 107 47 0 8 114 20 126 8.21e-37 129
Msa1258170 MtrunA17_Chr5g0434931 56.075 107 47 0 11 117 34 140 1.02e-36 131
Msa1258170 MtrunA17_Chr5g0434911 53.153 111 52 0 7 117 16 126 2.30e-36 130
Msa1258170 MtrunA17_Chr4g0042611 63.636 88 32 0 1 88 1 88 3.87e-36 124
Msa1258170 MtrunA17_Chr7g0240821 59.406 101 41 0 16 116 5 105 3.88e-36 128
Msa1258170 MtrunA17_Chr2g0322521 55.140 107 48 0 9 115 26 132 7.20e-36 132
Msa1258170 MtrunA17_Chr2g0294811 64.773 88 31 0 1 88 1 88 1.57e-35 123
Msa1258170 MtrunA17_Chr7g0228991 38.756 209 110 4 11 210 28 227 1.59e-35 128
Msa1258170 MtrunA17_Chr7g0220341 53.636 110 49 1 10 117 23 132 2.68e-35 127
Msa1258170 MtrunA17_Chr8g0342511 62.069 87 33 0 1 87 1 87 3.16e-35 122
Msa1258170 MtrunA17_Chr8g0342531 59.574 94 38 0 1 94 1 94 3.57e-35 124
Msa1258170 MtrunA17_Chr8g0342461 60.000 90 35 1 1 89 1 90 4.54e-35 123
Msa1258170 MtrunA17_Chr8g0342471 60.000 90 35 1 1 89 1 90 1.30e-34 122
Msa1258170 MtrunA17_Chr8g0360111 55.882 102 45 0 11 112 24 125 1.05e-33 123
Msa1258170 MtrunA17_Chr5g0434831 53.271 107 50 0 11 117 6 112 3.43e-33 119
Msa1258170 MtrunA17_Chr5g0440781 45.985 137 70 3 12 145 12 147 6.85e-33 119
Msa1258170 MtrunA17_Chr5g0440761 38.462 182 108 3 12 190 12 192 1.54e-32 120
Msa1258170 MtrunA17_Chr1g0192411 42.767 159 84 4 8 163 8 162 1.98e-32 123
Msa1258170 MtrunA17_Chr5g0434841 52.336 107 51 0 11 117 19 125 2.20e-32 121
Msa1258170 MtrunA17_Chr5g0441141 45.985 137 70 3 12 145 12 147 4.15e-32 119
Msa1258170 MtrunA17_Chr2g0323321 57.609 92 38 1 1 92 1 91 4.89e-32 114
Msa1258170 MtrunA17_Chr3g0093811 57.303 89 38 0 43 131 13 101 3.27e-31 116
Msa1258170 MtrunA17_Chr5g0395221 58.333 84 35 0 5 88 5 88 5.87e-31 110
Msa1258170 MtrunA17_Chr3g0099141 51.724 87 42 0 8 94 36 122 2.35e-29 108
Msa1258170 MtrunA17_Chr5g0429661 52.577 97 43 2 14 109 122 216 1.39e-28 111
Msa1258170 MtrunA17_Chr8g0334881 48.148 108 55 1 8 114 6 113 1.52e-28 110
Msa1258170 MtrunA17_Chr5g0441131 46.491 114 59 2 12 124 9 121 9.80e-28 105
Msa1258170 MtrunA17_Chr4g0013361 41.221 131 73 2 12 141 10 137 5.92e-27 106
Msa1258170 MtrunA17_Chr5g0401731 43.089 123 67 2 14 135 15 135 2.21e-26 105
Msa1258170 MtrunA17_Chr6g0454921 34.857 175 108 3 14 187 15 184 9.69e-26 100
Msa1258170 MtrunA17_Chr4g0008551 45.217 115 56 3 14 127 38 146 9.93e-26 103
Msa1258170 MtrunA17_Chr7g0238631 50.000 104 49 2 14 116 113 214 1.41e-25 105
Msa1258170 MtrunA17_Chr3g0117511 42.342 111 61 2 9 118 178 286 1.46e-25 104
Msa1258170 MtrunA17_Chr4g0058991 44.144 111 59 2 9 118 204 312 1.80e-25 104
Msa1258170 MtrunA17_Chr3g0133601 43.519 108 60 1 8 115 31 137 2.17e-25 100
Msa1258170 MtrunA17_Chr4g0053431 37.086 151 82 4 14 159 5 147 8.96e-25 99.8
Msa1258170 MtrunA17_Chr7g0229101 59.155 71 29 0 43 113 3 73 5.85e-24 96.3
Msa1258170 MtrunA17_Chr7g0229131 53.333 75 35 0 43 117 3 77 2.78e-23 93.2
Msa1258170 MtrunA17_Chr3g0139671 44.231 104 55 2 14 116 85 186 3.29e-23 99.0
Msa1258170 MtrunA17_Chr7g0228531 43.119 109 60 2 10 118 216 322 8.28e-23 96.7
Msa1258170 MtrunA17_Chr6g0480581 40.602 133 69 5 14 141 4 131 9.11e-23 93.6
Msa1258170 MtrunA17_Chr6g0453751 47.826 92 39 2 11 93 19 110 9.48e-23 90.9
Msa1258170 MtrunA17_Chr5g0437321 44.000 100 53 2 14 112 19 116 3.93e-22 93.2
Msa1258170 MtrunA17_Chr1g0157731 44.231 104 55 2 14 116 91 192 5.00e-22 95.5
Msa1258170 MtrunA17_Chr5g0434901 56.338 71 31 0 43 113 4 74 9.40e-22 87.8
Msa1258170 MtrunA17_Chr5g0417621 43.269 104 56 2 14 116 134 235 1.07e-20 90.9
Msa1258170 MtrunA17_Chr5g0425591 47.059 85 44 1 10 93 7 91 1.22e-20 84.0
Msa1258170 MtrunA17_Chr6g0460661 41.837 98 54 2 14 110 16 111 8.43e-20 84.0
Msa1258170 MtrunA17_Chr4g0042501 41.346 104 58 2 14 116 105 206 1.01e-19 87.8
Msa1258170 MtrunA17_Chr5g0397841 46.392 97 49 2 14 109 110 204 1.35e-19 87.8
Msa1258170 MtrunA17_Chr7g0228481 42.574 101 56 2 10 110 216 314 4.01e-19 86.3
Msa1258170 MtrunA17_Chr7g0233061 41.000 100 50 3 14 110 180 273 5.47e-19 85.5
Msa1258170 MtrunA17_Chr1g0177901 43.023 86 48 1 25 110 5 89 1.00e-18 82.0
Msa1258170 MtrunA17_Chr7g0228401 33.884 121 49 2 17 110 258 374 3.19e-18 84.0
Msa1258170 MtrunA17_Chr7g0238651 39.655 116 62 2 17 124 10 125 3.92e-18 82.8
Msa1258170 MtrunA17_Chr5g0395231 64.706 51 18 0 78 128 5 55 8.46e-18 80.5
Msa1258170 MtrunA17_Chr3g0125801 43.689 103 55 2 14 115 16 116 1.12e-17 80.9
Msa1258170 MtrunA17_Chr6g0460671 39.806 103 59 2 14 115 99 199 3.26e-17 80.1
Msa1258170 MtrunA17_Chr7g0254261 30.508 177 115 3 14 184 89 263 6.83e-17 79.3
Msa1258170 MtrunA17_Chr4g0042621 61.667 60 21 1 89 148 15 72 1.08e-15 75.9
Msa1258170 MtrunA17_Chr3g0145551 62.000 50 19 0 92 141 2 51 1.09e-15 70.5
Msa1258170 MtrunA17_Chr7g0247141 59.574 47 18 1 1 46 1 47 4.04e-14 65.9
Msa1258170 MtrunA17_Chr5g0434871 56.818 44 19 0 74 117 2 45 4.74e-13 63.2
Msa1258170 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 1.66e-12 67.0
Msa1258170 MtrunA17_Chr1g0193901 42.857 84 46 2 12 93 11 94 3.59e-12 62.0
Msa1258170 MtrunA17_Chr1g0193891 42.857 84 46 2 12 93 11 94 3.59e-12 62.0
Msa1258170 MtrunA17_Chr1g0193871 42.857 84 46 2 12 93 11 94 3.59e-12 62.0
Msa1258170 MtrunA17_Chr1g0193881 42.857 84 46 2 12 93 11 94 3.59e-12 62.0
Msa1258170 MtrunA17_Chr8g0362231 33.333 126 82 2 17 142 25 148 6.74e-12 65.1
Msa1258170 MtrunA17_Chr3g0104491 38.806 67 37 1 53 115 1 67 2.33e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258170 AT4G12350.1 56.383 282 105 6 1 264 1 282 6.09e-104 304
Msa1258170 AT4G22680.1 61.278 266 88 5 1 251 1 266 2.95e-103 301
Msa1258170 AT1G66230.1 59.716 211 65 4 1 208 1 194 3.05e-83 251
Msa1258170 AT5G16600.1 82.963 135 23 0 1 135 1 135 9.14e-82 249
Msa1258170 AT5G62320.1 64.198 162 48 2 2 156 3 161 1.29e-71 220
Msa1258170 AT5G14340.1 61.392 158 61 0 1 158 13 170 6.11e-68 212
Msa1258170 AT3G61250.1 63.087 149 55 0 1 149 1 149 4.46e-67 211
Msa1258170 AT4G28110.1 69.531 128 39 0 1 128 1 128 5.61e-67 209
Msa1258170 AT5G15310.2 68.702 131 41 0 1 131 1 131 8.30e-67 210
Msa1258170 AT5G15310.1 68.702 131 41 0 1 131 1 131 8.34e-67 211
Msa1258170 AT3G02940.2 71.094 128 37 0 1 128 1 128 8.54e-67 210
Msa1258170 AT5G15310.4 69.231 130 40 0 1 130 1 130 1.55e-66 207
Msa1258170 AT3G01140.2 64.583 144 51 0 1 144 1 144 1.65e-66 211
Msa1258170 AT3G02940.1 71.094 128 37 0 1 128 1 128 1.97e-66 209
Msa1258170 AT3G02940.3 71.094 128 37 0 1 128 1 128 1.97e-66 209
Msa1258170 AT5G16770.4 70.312 128 38 0 1 128 1 128 2.29e-66 209
Msa1258170 AT5G16770.3 70.312 128 38 0 1 128 1 128 2.29e-66 209
Msa1258170 AT5G16770.1 70.312 128 38 0 1 128 1 128 6.25e-66 209
Msa1258170 AT5G16770.2 70.312 128 38 0 1 128 1 128 6.25e-66 209
Msa1258170 AT1G22640.1 52.105 190 87 1 1 186 1 190 2.63e-65 204
Msa1258170 AT4G34990.1 63.014 146 54 0 1 146 1 146 2.99e-65 205
Msa1258170 AT4G21440.1 67.188 128 42 0 1 128 1 128 7.91e-65 206
Msa1258170 AT1G34670.1 69.531 128 39 0 1 128 1 128 2.25e-64 206
Msa1258170 AT4G38620.1 58.553 152 63 0 1 152 1 152 3.17e-64 202
Msa1258170 AT5G10280.1 66.406 128 43 0 1 128 1 128 1.12e-63 203
Msa1258170 AT4G05100.1 67.442 129 41 1 1 128 1 129 2.66e-63 202
Msa1258170 AT3G01140.1 64.286 140 50 0 5 144 48 187 3.09e-63 203
Msa1258170 AT4G17785.2 68.992 129 39 1 1 128 1 129 3.81e-63 202
Msa1258170 AT4G17785.1 68.992 129 39 1 1 128 1 129 5.36e-63 202
Msa1258170 AT5G65230.1 67.969 128 41 0 1 128 1 128 5.86e-63 200
Msa1258170 AT4G09460.1 48.780 205 100 3 1 203 1 202 2.23e-62 196
Msa1258170 AT1G57560.2 64.748 139 49 0 1 139 1 139 2.74e-62 197
Msa1258170 AT1G57560.1 62.000 150 52 1 1 145 1 150 7.14e-62 197
Msa1258170 AT2G16720.1 54.167 168 75 1 1 168 1 166 1.93e-61 195
Msa1258170 AT1G09540.1 56.627 166 71 1 1 166 1 165 3.26e-61 197
Msa1258170 AT3G13540.1 48.485 198 96 3 5 198 16 211 5.16e-61 193
Msa1258170 AT5G26660.1 53.226 186 80 3 1 181 1 184 6.24e-61 196
Msa1258170 AT5G07690.1 60.284 141 56 0 1 141 1 141 1.52e-60 195
Msa1258170 AT5G61420.2 58.940 151 57 2 1 148 1 149 3.28e-60 195
Msa1258170 AT4G01680.3 57.143 161 64 2 1 161 1 156 2.09e-59 189
Msa1258170 AT5G54230.1 59.211 152 62 0 1 152 1 152 2.90e-59 191
Msa1258170 AT5G07700.1 52.874 174 71 2 1 174 1 163 3.57e-59 191
Msa1258170 AT5G07700.2 52.874 174 71 2 1 174 1 163 3.57e-59 191
Msa1258170 AT5G56110.1 59.441 143 58 0 1 143 1 143 6.48e-59 190
Msa1258170 AT4G01680.1 57.143 161 64 2 1 161 1 156 7.58e-59 191
Msa1258170 AT1G35515.1 50.000 192 82 2 1 189 1 181 1.08e-58 186
Msa1258170 AT1G18570.1 56.329 158 64 3 1 156 1 155 2.25e-57 187
Msa1258170 AT1G74080.1 56.463 147 64 0 1 147 1 147 3.86e-57 186
Msa1258170 AT3G23250.1 46.569 204 100 3 1 204 1 195 1.60e-56 183
Msa1258170 AT2G31180.1 67.797 118 38 0 1 118 1 118 2.11e-56 181
Msa1258170 AT1G06180.1 68.103 116 37 0 1 116 1 116 6.28e-56 180
Msa1258170 AT3G47600.1 57.419 155 56 1 1 145 1 155 1.05e-55 182
Msa1258170 AT4G01680.2 53.179 173 64 3 1 161 1 168 1.76e-55 182
Msa1258170 AT5G60890.1 58.462 130 54 0 1 130 1 130 9.13e-55 179
Msa1258170 AT2G47460.1 57.241 145 62 0 1 145 1 145 6.22e-54 179
Msa1258170 AT1G16490.1 52.121 165 71 1 2 158 4 168 1.19e-53 175
Msa1258170 AT3G12720.1 61.905 126 47 1 1 126 12 136 1.21e-53 176
Msa1258170 AT3G28470.1 55.484 155 61 1 1 147 1 155 2.55e-53 176
Msa1258170 AT5G62470.2 61.871 139 51 1 1 139 1 137 2.61e-53 177
Msa1258170 AT1G79180.1 65.812 117 40 0 2 118 4 120 1.01e-52 173
Msa1258170 AT5G49330.1 63.866 119 43 0 1 119 1 119 1.24e-52 175
Msa1258170 AT3G62610.1 65.517 116 40 0 1 116 1 116 1.59e-52 174
Msa1258170 AT1G56160.1 66.957 115 38 0 2 116 4 118 2.87e-52 172
Msa1258170 AT3G28910.1 63.359 131 46 1 1 131 1 129 3.16e-52 173
Msa1258170 AT1G18710.1 55.000 140 63 0 1 140 1 140 4.69e-52 171
Msa1258170 AT3G12820.1 66.379 116 39 0 3 118 5 120 5.66e-52 170
Msa1258170 AT1G74650.1 63.025 119 44 0 1 119 1 119 2.52e-51 171
Msa1258170 AT1G74430.1 56.204 137 60 0 1 137 1 137 4.42e-51 169
Msa1258170 AT1G08810.1 62.295 122 46 0 1 122 1 122 4.78e-51 169
Msa1258170 AT5G62470.1 61.151 139 51 2 1 139 1 136 9.82e-51 170
Msa1258170 AT1G63910.1 54.610 141 64 0 1 141 1 141 1.82e-50 170
Msa1258170 AT3G13890.2 62.393 117 44 0 1 117 1 117 3.28e-50 169
Msa1258170 AT5G12870.1 66.667 108 36 0 12 119 18 125 8.27e-48 160
Msa1258170 AT3G13890.1 57.937 126 44 1 1 117 1 126 3.42e-47 161
Msa1258170 AT3G49690.1 60.169 118 46 1 1 117 1 118 1.21e-46 158
Msa1258170 AT4G37780.1 55.303 132 55 3 1 130 1 130 4.77e-46 157
Msa1258170 AT5G65790.1 59.322 118 47 1 1 117 1 118 4.84e-46 158
Msa1258170 AT1G79180.2 51.333 150 40 1 2 118 4 153 6.78e-46 157
Msa1258170 AT2G36890.1 57.031 128 54 1 1 127 1 128 7.92e-46 156
Msa1258170 AT5G57620.1 52.857 140 59 2 1 139 1 134 9.49e-46 157
Msa1258170 AT2G36890.2 57.031 128 54 1 1 127 42 169 1.69e-45 156
Msa1258170 AT3G01530.1 51.825 137 63 1 12 148 25 158 5.10e-45 151
Msa1258170 AT5G23000.1 58.475 118 48 1 1 117 1 118 7.65e-45 154
Msa1258170 AT3G08500.1 63.303 109 40 0 8 116 26 134 1.16e-44 154
Msa1258170 AT4G13480.1 66.019 103 35 0 13 115 7 109 1.39e-44 151
Msa1258170 AT3G24310.1 64.762 105 37 0 11 115 17 121 2.97e-44 151
Msa1258170 AT5G40350.1 60.550 109 43 0 12 120 17 125 5.78e-44 148
Msa1258170 AT3G27810.1 40.488 205 102 3 12 196 20 224 2.30e-43 147
Msa1258170 AT5G52260.1 48.795 166 73 3 13 175 13 169 1.09e-42 147
Msa1258170 AT5G14750.1 60.000 105 42 0 12 116 16 120 1.36e-42 144
Msa1258170 AT5G40330.1 60.577 104 41 0 13 116 13 116 4.22e-42 144
Msa1258170 AT4G25560.1 59.434 106 43 0 13 118 11 116 4.32e-42 145
Msa1258170 AT2G32460.1 55.556 117 51 1 11 127 17 132 9.14e-42 149
Msa1258170 AT2G32460.2 55.556 117 51 1 11 127 5 120 9.19e-42 149
Msa1258170 AT1G68320.1 56.757 111 48 0 12 122 19 129 1.41e-41 144
Msa1258170 AT5G55020.1 58.182 110 45 1 12 121 26 134 2.06e-41 149
Msa1258170 AT5G26660.2 57.812 128 47 3 45 167 14 139 3.03e-41 144
Msa1258170 AT5G06100.1 57.407 108 46 0 8 115 28 135 3.14e-41 147
Msa1258170 AT5G59780.3 61.538 104 40 0 12 115 8 111 4.47e-41 142
Msa1258170 AT3G46130.1 60.952 105 41 0 11 115 8 112 4.67e-41 142
Msa1258170 AT5G35550.1 53.968 126 54 1 12 137 14 135 5.98e-41 142
Msa1258170 AT3G27920.1 57.143 105 45 0 13 117 15 119 6.52e-41 141
Msa1258170 AT3G06490.1 57.391 115 49 0 8 122 15 129 1.11e-40 143
Msa1258170 AT1G25340.1 53.913 115 53 0 13 127 19 133 1.28e-40 142
Msa1258170 AT5G06100.5 57.407 108 46 0 8 115 28 135 1.37e-40 147
Msa1258170 AT5G06100.2 57.407 108 46 0 8 115 28 135 1.37e-40 147
Msa1258170 AT5G06100.3 57.407 108 46 0 8 115 28 135 1.37e-40 147
Msa1258170 AT5G06100.4 57.407 108 46 0 8 115 28 135 1.37e-40 147
Msa1258170 AT3G30210.1 60.577 104 41 0 11 114 26 129 1.95e-40 141
Msa1258170 AT3G11440.2 57.692 104 44 0 12 115 41 144 2.55e-40 145
Msa1258170 AT1G48000.1 53.982 113 50 1 12 122 32 144 4.82e-40 139
Msa1258170 AT3G11440.3 57.692 104 44 0 12 115 41 144 8.39e-40 145
Msa1258170 AT3G11440.4 57.692 104 44 0 12 115 41 144 8.39e-40 145
Msa1258170 AT3G11440.1 57.692 104 44 0 12 115 41 144 8.39e-40 145
Msa1258170 AT2G26960.1 43.333 180 99 3 9 188 17 193 3.93e-39 141
Msa1258170 AT3G53200.1 42.045 176 91 3 12 176 9 184 9.87e-39 135
Msa1258170 AT2G47190.1 53.153 111 52 0 12 122 20 130 1.54e-38 136
Msa1258170 AT3G48920.1 50.820 122 55 1 13 134 19 135 2.46e-38 135
Msa1258170 AT5G52600.1 41.509 159 80 1 12 170 12 157 2.92e-38 133
Msa1258170 AT4G26930.1 46.617 133 70 1 12 143 19 151 1.35e-37 136
Msa1258170 AT5G49620.1 53.043 115 54 0 8 122 22 136 1.24e-36 132
Msa1258170 AT1G25340.2 51.304 115 51 1 13 127 19 128 1.33e-35 129
Msa1258170 AT3G47600.2 52.273 132 49 2 24 145 22 149 2.64e-35 129
Msa1258170 AT1G25340.3 51.304 115 51 1 13 127 19 128 3.69e-35 128
Msa1258170 AT1G22640.3 49.242 132 63 1 59 186 2 133 2.03e-34 123
Msa1258170 AT1G66370.1 55.652 115 47 1 1 115 1 111 3.26e-34 124
Msa1258170 AT5G49620.2 47.287 129 54 1 8 122 22 150 5.00e-33 123
Msa1258170 AT1G66390.1 59.048 105 43 0 11 115 7 111 7.05e-32 118
Msa1258170 AT1G66380.1 58.095 105 44 0 11 115 7 111 1.03e-31 114
Msa1258170 AT5G35550.2 55.556 99 40 1 39 137 44 138 1.97e-31 117
Msa1258170 AT1G56650.1 52.381 126 52 1 11 128 7 132 2.04e-31 117
Msa1258170 AT3G27810.2 38.953 172 85 3 45 196 4 175 4.35e-31 114
Msa1258170 AT5G59780.2 71.831 71 20 0 45 115 20 90 6.00e-31 115
Msa1258170 AT3G46130.3 70.833 72 21 0 44 115 9 80 6.07e-31 115
Msa1258170 AT5G40350.2 65.789 76 26 0 45 120 5 80 6.21e-31 113
Msa1258170 AT3G46130.4 71.831 71 20 0 45 115 20 90 1.07e-30 115
Msa1258170 AT3G12820.2 70.423 71 21 0 48 118 2 72 1.53e-30 113
Msa1258170 AT5G14750.3 69.565 69 21 0 48 116 18 86 1.66e-30 112
Msa1258170 AT3G53200.2 44.755 143 68 3 45 176 9 151 3.22e-30 112
Msa1258170 AT1G18960.1 46.154 117 60 2 14 130 10 123 7.20e-29 112
Msa1258170 AT2G26950.1 45.000 120 64 2 14 133 18 135 2.44e-28 112
Msa1258170 AT5G11050.1 45.614 114 56 3 3 115 97 205 4.65e-28 111
Msa1258170 AT3G60460.1 49.038 104 52 1 12 114 11 114 5.59e-28 109
Msa1258170 AT5G58850.1 49.515 103 49 2 14 115 105 205 7.35e-28 111
Msa1258170 AT1G71030.2 58.442 77 32 0 51 127 5 81 5.19e-27 103
Msa1258170 AT1G71030.1 53.333 90 41 1 38 127 7 95 6.31e-27 103
Msa1258170 AT4G18770.1 46.226 106 54 2 14 118 217 320 3.45e-26 106
Msa1258170 AT3G27785.1 47.525 101 52 1 9 109 184 283 1.56e-25 104
Msa1258170 AT3G09230.1 36.264 182 93 4 14 180 55 228 3.20e-25 103
Msa1258170 AT5G02320.1 48.077 104 51 2 14 116 127 228 4.61e-25 104
Msa1258170 AT5G02320.2 48.077 104 51 2 14 116 127 228 4.61e-25 104
Msa1258170 AT5G02320.3 48.077 104 51 2 14 116 67 168 5.95e-25 103
Msa1258170 AT3G09370.2 47.573 103 51 2 14 115 135 235 1.20e-24 102
Msa1258170 AT3G09370.1 47.573 103 51 2 14 115 130 230 1.36e-24 102
Msa1258170 AT3G09370.3 47.573 103 51 2 14 115 143 243 1.93e-24 102
Msa1258170 AT5G40360.1 41.905 105 59 2 12 116 156 258 2.69e-24 100
Msa1258170 AT2G39880.1 47.170 106 47 2 14 115 50 150 4.27e-24 100
Msa1258170 AT4G37260.1 44.660 103 54 2 14 115 13 113 3.36e-23 97.1
Msa1258170 AT5G67300.1 43.689 103 55 2 14 115 6 106 4.00e-23 96.3
Msa1258170 AT5G11510.3 45.192 104 54 2 14 116 81 182 4.36e-23 99.0
Msa1258170 AT5G11510.1 45.192 104 54 2 14 116 81 182 4.36e-23 99.0
Msa1258170 AT5G11510.4 45.192 104 54 2 14 116 81 182 4.36e-23 99.0
Msa1258170 AT2G23290.1 46.602 103 52 2 14 115 13 113 4.75e-23 96.3
Msa1258170 AT5G11510.2 45.192 104 54 2 14 116 81 182 6.39e-23 98.6
Msa1258170 AT3G55730.1 43.925 107 57 2 14 119 56 160 7.08e-23 97.1
Msa1258170 AT5G11510.5 45.192 104 54 2 14 116 81 182 7.15e-23 98.2
Msa1258170 AT3G50060.1 44.660 103 54 2 14 115 6 106 7.99e-23 95.5
Msa1258170 AT1G66380.3 61.644 73 28 0 43 115 6 78 1.11e-22 90.1
Msa1258170 AT1G69560.1 43.119 109 59 2 9 116 102 208 3.33e-22 94.4
Msa1258170 AT1G69560.2 43.119 109 59 2 9 116 118 224 3.98e-22 94.4
Msa1258170 AT5G14750.4 65.517 58 20 0 59 116 2 59 7.34e-22 89.0
Msa1258170 AT5G14750.2 65.517 58 20 0 59 116 2 59 7.34e-22 89.0
Msa1258170 AT4G32730.5 43.269 104 56 2 14 116 87 188 1.06e-21 95.1
Msa1258170 AT4G32730.4 43.269 104 56 2 14 116 87 188 1.06e-21 95.1
Msa1258170 AT4G32730.3 43.269 104 56 2 14 116 87 188 1.06e-21 95.1
Msa1258170 AT4G32730.2 43.269 104 56 2 14 116 87 188 1.06e-21 95.1
Msa1258170 AT4G32730.1 43.269 104 56 2 14 116 87 188 1.07e-21 94.7
Msa1258170 AT3G23250.2 65.517 58 20 0 59 116 2 59 1.22e-21 90.9
Msa1258170 AT2G25230.1 33.333 189 102 6 9 190 21 192 1.36e-21 90.9
Msa1258170 AT1G17950.1 45.631 103 53 2 14 115 5 105 5.20e-21 89.7
Msa1258170 AT1G26780.2 43.269 104 56 2 14 116 98 199 3.59e-20 89.0
Msa1258170 AT1G26780.1 43.269 104 56 2 14 116 98 199 3.64e-20 87.8
Msa1258170 AT1G22640.2 45.631 103 52 1 88 186 16 118 6.44e-20 85.1
Msa1258170 AT1G73410.1 45.631 103 53 2 14 115 6 106 5.46e-19 84.0
Msa1258170 AT4G28110.2 78.049 41 9 0 88 128 4 44 5.47e-19 82.8
Msa1258170 AT5G61420.1 59.155 71 24 2 81 148 2 70 9.83e-19 84.0
Msa1258170 AT1G73410.2 45.631 103 53 2 14 115 6 106 1.53e-18 82.0
Msa1258170 AT4G00540.2 42.202 109 57 3 12 116 101 207 2.88e-18 84.0
Msa1258170 AT4G33450.1 37.719 114 63 3 3 115 13 119 3.55e-18 82.0
Msa1258170 AT4G00540.1 42.202 109 57 3 12 116 99 205 4.48e-18 83.6
Msa1258170 AT3G29020.1 36.538 104 63 2 14 116 65 166 1.16e-17 80.1
Msa1258170 AT3G29020.2 36.538 104 63 2 14 116 67 168 1.36e-17 81.3
Msa1258170 AT5G40430.1 34.821 112 71 1 9 120 49 158 1.86e-17 80.1
Msa1258170 AT1G66380.2 51.190 84 41 0 11 94 7 90 2.55e-17 76.3
Msa1258170 AT5G17800.1 39.216 102 61 1 14 115 93 193 2.77e-17 80.5
Msa1258170 AT5G15310.3 72.727 44 12 0 88 131 9 52 3.52e-17 79.0
Msa1258170 AT5G59780.1 69.565 46 14 0 70 115 1 46 1.21e-16 75.9
Msa1258170 AT3G46130.2 69.565 46 14 0 70 115 1 46 2.44e-16 75.5
Msa1258170 AT2G37630.1 39.604 101 59 1 17 115 7 107 2.90e-16 78.2
Msa1258170 AT5G14340.2 49.296 71 36 0 88 158 10 80 2.14e-15 72.8
Msa1258170 AT4G25560.2 54.000 50 23 0 69 118 1 50 6.60e-14 69.3
Msa1258170 AT3G28910.2 58.182 55 21 1 77 131 1 53 9.60e-14 69.7
Msa1258170 AT5G39700.1 34.545 110 71 1 15 124 57 165 1.10e-13 68.2
Msa1258170 AT1G74650.3 65.116 43 15 0 77 119 1 43 2.10e-13 68.6
Msa1258170 AT1G14350.2 35.000 120 69 2 17 136 28 138 2.23e-13 70.1
Msa1258170 AT1G14350.1 35.000 120 69 2 17 136 28 138 2.23e-13 70.1
Msa1258170 AT1G74430.2 58.333 48 20 0 81 128 12 59 2.50e-13 67.8
Msa1258170 AT2G02820.1 37.374 99 61 1 17 115 33 130 3.62e-12 66.2
Msa1258170 AT2G02820.2 37.374 99 61 1 17 115 33 130 3.83e-12 66.2
Msa1258170 AT2G02820.3 37.374 99 61 1 17 115 33 130 4.34e-12 65.9

Find 74 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACTTTCTTCCAATTAAT+TGG 0.155598 8_2:-59329376 Msa1258170:three_prime_UTR
TATGAATAAGTAAGTATATT+TGG 0.211575 8_2:-59329582 Msa1258170:three_prime_UTR
ATAAAATTACACCAATTAAT+TGG 0.231851 8_2:+59329365 None:intergenic
CATCAGTTTCCTTCACTTCA+TGG 0.233477 8_2:+59329946 None:intergenic
GATGTTTAATTTGAAAATAA+TGG 0.248735 8_2:-59329259 Msa1258170:three_prime_UTR
AGTGTTTCAAAGAATGTTCT+TGG 0.272409 8_2:-59329496 Msa1258170:three_prime_UTR
TTCACTTCATGGTTGTTAAC+AGG 0.301922 8_2:+59329957 None:intergenic
TCCCCAGCTGAAAATTCTTC+TGG 0.318088 8_2:-59329891 Msa1258170:CDS
ACCATTGGTGGAAGCCCTTT+GGG 0.330830 8_2:-59329796 Msa1258170:CDS
TTCAAAGGTTCATGAGTAAT+GGG 0.340405 8_2:+59330038 None:intergenic
CGCCGAAGGCCGGCAAGTTT+AGG 0.348205 8_2:+59330788 None:intergenic
CACCATTGGTGGAAGCCCTT+TGG 0.357777 8_2:-59329797 Msa1258170:CDS
TCAAGTACACTGCAAACTAT+AGG 0.364172 8_2:-59329630 Msa1258170:CDS
ATTCTCTAATGAATAGTATA+TGG 0.364682 8_2:-59329830 Msa1258170:CDS
TGCTTGGCTATTTGATTGTC+AGG 0.369569 8_2:-59329700 Msa1258170:CDS
TGCCTAAACTTGCCGGCCTT+CGG 0.372731 8_2:-59330790 Msa1258170:CDS
AATCTCATTGTCTGTTCTCC+CGG 0.377399 8_2:+59330115 None:intergenic
TGTCAAAGTAAGATTATTAG+AGG 0.380952 8_2:-59329313 Msa1258170:three_prime_UTR
GGTGGAAGCCCTTTGGGAAA+TGG 0.381456 8_2:-59329790 Msa1258170:CDS
GACTTTGGTATTCATGACTT+TGG 0.387701 8_2:-59329678 Msa1258170:CDS
TTGTCTTCCTCAGCTGTCCA+TGG 0.396088 8_2:+59330863 None:intergenic
TCCATGCCCGTCTTGGCAAC+AGG 0.396729 8_2:-59330667 Msa1258170:intron
CGTGCTGTGCCTAAACTTGC+CGG 0.397024 8_2:-59330797 Msa1258170:CDS
CTATTTGATTGTCAGGACTT+TGG 0.417724 8_2:-59329693 Msa1258170:CDS
ATTCAAAGGTTCATGAGTAA+TGG 0.432527 8_2:+59330037 None:intergenic
TTGCATTGGTCGTGAGCTAT+GGG 0.432774 8_2:-59330926 Msa1258170:exon
CAAAGAATGTTCTTGGAAAG+TGG 0.445187 8_2:-59329489 Msa1258170:three_prime_UTR
CAAGTACACTGCAAACTATA+GGG 0.456076 8_2:-59329629 Msa1258170:CDS
AGGAGACCTCTCTTTAAATC+AGG 0.457518 8_2:+59330722 None:intergenic
CTTGCATTGGTCGTGAGCTA+TGG 0.459948 8_2:-59330927 Msa1258170:exon
AAGATTGCTTCACGGTTACC+CGG 0.461826 8_2:-59330134 Msa1258170:CDS
GATGATGCTTGTTTATTCAA+AGG 0.463222 8_2:+59330023 None:intergenic
GGATGAAGTACTACTATCAT+TGG 0.464276 8_2:+59330001 None:intergenic
TTACCAATGGACAATGTTGT+TGG 0.466351 8_2:-59330820 Msa1258170:CDS
CTTACCGCAGCGCCGAAGGC+CGG 0.466439 8_2:+59330778 None:intergenic
CTTGGGAGGATAATTGTGCT+TGG 0.466595 8_2:-59329716 Msa1258170:CDS
GTAAGAGCTGTCGTCTTCGT+TGG 0.481721 8_2:-59330760 Msa1258170:CDS
TCCCAAAGGGCTTCCACCAA+TGG 0.485135 8_2:+59329795 None:intergenic
AAGGTGTGGGCTATATATAA+AGG 0.497898 8_2:-59330991 None:intergenic
TGTAGTGTCCATTTCCCAAA+GGG 0.498177 8_2:+59329782 None:intergenic
AGCTCTTACCGCAGCGCCGA+AGG 0.506544 8_2:+59330774 None:intergenic
TTCACTAGGAACATCATAAG+AGG 0.511097 8_2:+59329453 None:intergenic
GCTATATATAAAGGCAGTGT+TGG 0.516067 8_2:-59330982 Msa1258170:five_prime_UTR
CTTCGTCCTGATTTAAAGAG+AGG 0.516437 8_2:-59330728 Msa1258170:CDS
ATCTCATTGTCTGTTCTCCC+GGG 0.520189 8_2:+59330116 None:intergenic
TCTAATGAATAGTATATGGT+TGG 0.521314 8_2:-59329826 Msa1258170:CDS
GTTGATCTCCATGCCCGTCT+TGG 0.522608 8_2:-59330674 Msa1258170:CDS
TTACTTTGAAGGACTTGCAT+TGG 0.523681 8_2:-59330940 Msa1258170:five_prime_UTR
ACTGCAAACTATAGGGATGA+AGG 0.532537 8_2:-59329622 Msa1258170:CDS
ACCTGTTGCCAAGACGGGCA+TGG 0.540749 8_2:+59330666 None:intergenic
AGGTCTCCTCACTGAAGCAG+AGG 0.546557 8_2:-59330708 Msa1258170:CDS
GGTGGTCGAAGATTGCTTCA+CGG 0.554833 8_2:-59330142 Msa1258170:CDS
ATGAAGTGAAGGAAACTGAT+GGG 0.557455 8_2:-59329944 Msa1258170:CDS
CATGAAGTGAAGGAAACTGA+TGG 0.577027 8_2:-59329945 Msa1258170:CDS
GACAAACTTGGTGTGAAGAA+AGG 0.580734 8_2:-59330887 Msa1258170:CDS
GAATGTTCTTGGAAAGTGGA+AGG 0.586986 8_2:-59329485 Msa1258170:three_prime_UTR
GCACAATTATCCTCCCAAGA+AGG 0.588656 8_2:+59329720 None:intergenic
AGATTGCTTCACGGTTACCC+GGG 0.595542 8_2:-59330133 Msa1258170:CDS
TTGGTGTGAAGAAAGGTCCA+TGG 0.601705 8_2:-59330880 Msa1258170:CDS
CAACCTTGTTGTGACAAACT+TGG 0.602134 8_2:-59330899 Msa1258170:CDS
GTCAAAGTAAGATTATTAGA+GGG 0.607381 8_2:-59329312 Msa1258170:three_prime_UTR
ACGCCAACAACATTGTCCAT+TGG 0.609352 8_2:+59330817 None:intergenic
TAGGAACATCATAAGAGGAA+AGG 0.611121 8_2:+59329458 None:intergenic
TGTTAACAACCATGAAGTGA+AGG 0.612004 8_2:-59329955 Msa1258170:CDS
GTTGGATGAAACACCATTGG+TGG 0.620513 8_2:-59329808 Msa1258170:CDS
ACACCAAGTTTGTCACAACA+AGG 0.629808 8_2:+59330896 None:intergenic
GTGTAGTGTCCATTTCCCAA+AGG 0.630743 8_2:+59329781 None:intergenic
GAAAGGTCCATGGACAGCTG+AGG 0.648683 8_2:-59330870 Msa1258170:CDS
ACTAAATAAAACTCAACACA+AGG 0.652484 8_2:+59329520 None:intergenic
ATGGTTGGATGAAACACCAT+TGG 0.670766 8_2:-59329811 Msa1258170:CDS
TGCATTGGTCGTGAGCTATG+GGG 0.692051 8_2:-59330925 Msa1258170:exon
TGATGGGGTTGTCAACTCAG+AGG 0.704259 8_2:-59329928 Msa1258170:CDS
GCTGCTCCTCTGCTTCAGTG+AGG 0.712120 8_2:+59330702 None:intergenic
TGAAGTGAAGGAAACTGATG+GGG 0.739601 8_2:-59329943 Msa1258170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTACATAAGAATTT+TGG + chr8_2:59329742-59329761 None:intergenic 10.0%
!!! ATTTTTTTACATAAGAATTT+TGG + chr8_2:59329742-59329761 None:intergenic 10.0%
!! TTATTATTGATGTTAAAAGT+AGG - chr8_2:59329819-59329838 Msa1258170:CDS 15.0%
!! TATGAATAAGTAAGTATATT+TGG - chr8_2:59330637-59330656 Msa1258170:intron 15.0%
!! ATAAAATTACACCAATTAAT+TGG + chr8_2:59330857-59330876 None:intergenic 15.0%
!!! GATGTTTAATTTGAAAATAA+TGG - chr8_2:59330960-59330979 Msa1258170:five_prime_UTR 15.0%
!! TTATTATTGATGTTAAAAGT+AGG - chr8_2:59329819-59329838 Msa1258170:CDS 15.0%
!! TATGAATAAGTAAGTATATT+TGG - chr8_2:59330637-59330656 Msa1258170:intron 15.0%
!! ATAAAATTACACCAATTAAT+TGG + chr8_2:59330857-59330876 None:intergenic 15.0%
!!! GATGTTTAATTTGAAAATAA+TGG - chr8_2:59330960-59330979 Msa1258170:five_prime_UTR 15.0%
!!! TGTATTTTATGTGTTTATGT+TGG + chr8_2:59329691-59329710 None:intergenic 20.0%
!! ACAATGAGATTAAAAATCAT+TGG - chr8_2:59330116-59330135 Msa1258170:CDS 20.0%
!! ATTCTCTAATGAATAGTATA+TGG - chr8_2:59330389-59330408 Msa1258170:intron 20.0%
!!! TTGCTATCATTTTTTTGATT+TGG + chr8_2:59330792-59330811 None:intergenic 20.0%
!! TATACTTTCTTCCAATTAAT+TGG - chr8_2:59330843-59330862 Msa1258170:CDS 20.0%
!!! TGTATTTTATGTGTTTATGT+TGG + chr8_2:59329691-59329710 None:intergenic 20.0%
!! ACAATGAGATTAAAAATCAT+TGG - chr8_2:59330116-59330135 Msa1258170:CDS 20.0%
!! ATTCTCTAATGAATAGTATA+TGG - chr8_2:59330389-59330408 Msa1258170:intron 20.0%
!!! TTGCTATCATTTTTTTGATT+TGG + chr8_2:59330792-59330811 None:intergenic 20.0%
!! TATACTTTCTTCCAATTAAT+TGG - chr8_2:59330843-59330862 Msa1258170:CDS 20.0%
!!! TTACTTTTGCATTACTTTGA+AGG - chr8_2:59329268-59329287 Msa1258170:three_prime_UTR 25.0%
!!! ATCACTTTTATTCTTACCAA+TGG - chr8_2:59329386-59329405 Msa1258170:three_prime_UTR 25.0%
!!! AAGAATTTTGGTGTCAAAAA+CGG + chr8_2:59329730-59329749 None:intergenic 25.0%
! AGACATGTTAATTGAATTGA+AGG + chr8_2:59329796-59329815 None:intergenic 25.0%
! TTATTGATGTTAAAAGTAGG+TGG - chr8_2:59329822-59329841 Msa1258170:CDS 25.0%
! TATTGATGTTAAAAGTAGGT+GGG - chr8_2:59329823-59329842 Msa1258170:CDS 25.0%
!! TTTTATATCATGTCTTAGAC+AGG - chr8_2:59329848-59329867 Msa1258170:CDS 25.0%
! TTTATATCATGTCTTAGACA+GGG - chr8_2:59329849-59329868 Msa1258170:CDS 25.0%
! CATAGACTAATTTCTTAAGT+TGG - chr8_2:59330019-59330038 Msa1258170:CDS 25.0%
! AAGAAAAAGCTCATTAAGAT+GGG - chr8_2:59330151-59330170 Msa1258170:intron 25.0%
! TCTAATGAATAGTATATGGT+TGG - chr8_2:59330393-59330412 Msa1258170:intron 25.0%
!!! TTTTTTGTGTTTTCTGCTAT+AGG + chr8_2:59330463-59330482 None:intergenic 25.0%
! ACTAAATAAAACTCAACACA+AGG + chr8_2:59330702-59330721 None:intergenic 25.0%
!!! TTTTTTTGATTTGGTTCACT+AGG + chr8_2:59330783-59330802 None:intergenic 25.0%
!! TGTAGCATTACCATTATTTT+TGG + chr8_2:59330816-59330835 None:intergenic 25.0%
! TGTCAAAGTAAGATTATTAG+AGG - chr8_2:59330906-59330925 Msa1258170:CDS 25.0%
! GTCAAAGTAAGATTATTAGA+GGG - chr8_2:59330907-59330926 Msa1258170:CDS 25.0%
!!! TTACTTTTGCATTACTTTGA+AGG - chr8_2:59329268-59329287 Msa1258170:three_prime_UTR 25.0%
!!! ATCACTTTTATTCTTACCAA+TGG - chr8_2:59329386-59329405 Msa1258170:three_prime_UTR 25.0%
!!! AAGAATTTTGGTGTCAAAAA+CGG + chr8_2:59329730-59329749 None:intergenic 25.0%
! AGACATGTTAATTGAATTGA+AGG + chr8_2:59329796-59329815 None:intergenic 25.0%
! TTATTGATGTTAAAAGTAGG+TGG - chr8_2:59329822-59329841 Msa1258170:CDS 25.0%
! TATTGATGTTAAAAGTAGGT+GGG - chr8_2:59329823-59329842 Msa1258170:CDS 25.0%
!! TTTTATATCATGTCTTAGAC+AGG - chr8_2:59329848-59329867 Msa1258170:CDS 25.0%
! TTTATATCATGTCTTAGACA+GGG - chr8_2:59329849-59329868 Msa1258170:CDS 25.0%
! CATAGACTAATTTCTTAAGT+TGG - chr8_2:59330019-59330038 Msa1258170:CDS 25.0%
! AAGAAAAAGCTCATTAAGAT+GGG - chr8_2:59330151-59330170 Msa1258170:intron 25.0%
! TCTAATGAATAGTATATGGT+TGG - chr8_2:59330393-59330412 Msa1258170:intron 25.0%
!!! TTTTTTGTGTTTTCTGCTAT+AGG + chr8_2:59330463-59330482 None:intergenic 25.0%
! ACTAAATAAAACTCAACACA+AGG + chr8_2:59330702-59330721 None:intergenic 25.0%
!!! TTTTTTTGATTTGGTTCACT+AGG + chr8_2:59330783-59330802 None:intergenic 25.0%
!! TGTAGCATTACCATTATTTT+TGG + chr8_2:59330816-59330835 None:intergenic 25.0%
! TGTCAAAGTAAGATTATTAG+AGG - chr8_2:59330906-59330925 Msa1258170:CDS 25.0%
! GTCAAAGTAAGATTATTAGA+GGG - chr8_2:59330907-59330926 Msa1258170:CDS 25.0%
! GTGTTTATGTTGGTTGTATA+AGG + chr8_2:59329681-59329700 None:intergenic 30.0%
!!! AGAATTTTGGTGTCAAAAAC+GGG + chr8_2:59329729-59329748 None:intergenic 30.0%
!! CTAATTTCTTAAGTTGGTGA+TGG - chr8_2:59330025-59330044 Msa1258170:CDS 30.0%
ATATAGTTGATTGTTGTCTC+AGG - chr8_2:59330056-59330075 Msa1258170:CDS 30.0%
CAAGAAAAAGCTCATTAAGA+TGG - chr8_2:59330150-59330169 Msa1258170:intron 30.0%
TTCAAAGGTTCATGAGTAAT+GGG + chr8_2:59330184-59330203 None:intergenic 30.0%
ATTCAAAGGTTCATGAGTAA+TGG + chr8_2:59330185-59330204 None:intergenic 30.0%
GATGATGCTTGTTTATTCAA+AGG + chr8_2:59330199-59330218 None:intergenic 30.0%
AGTGTTTCAAAGAATGTTCT+TGG - chr8_2:59330723-59330742 Msa1258170:CDS 30.0%
TGATAGCAAGCCAAAAATAA+TGG - chr8_2:59330803-59330822 Msa1258170:CDS 30.0%
! GTGTTTATGTTGGTTGTATA+AGG + chr8_2:59329681-59329700 None:intergenic 30.0%
!!! AGAATTTTGGTGTCAAAAAC+GGG + chr8_2:59329729-59329748 None:intergenic 30.0%
!! CTAATTTCTTAAGTTGGTGA+TGG - chr8_2:59330025-59330044 Msa1258170:CDS 30.0%
ATATAGTTGATTGTTGTCTC+AGG - chr8_2:59330056-59330075 Msa1258170:CDS 30.0%
CAAGAAAAAGCTCATTAAGA+TGG - chr8_2:59330150-59330169 Msa1258170:intron 30.0%
TTCAAAGGTTCATGAGTAAT+GGG + chr8_2:59330184-59330203 None:intergenic 30.0%
ATTCAAAGGTTCATGAGTAA+TGG + chr8_2:59330185-59330204 None:intergenic 30.0%
GATGATGCTTGTTTATTCAA+AGG + chr8_2:59330199-59330218 None:intergenic 30.0%
AGTGTTTCAAAGAATGTTCT+TGG - chr8_2:59330723-59330742 Msa1258170:CDS 30.0%
TGATAGCAAGCCAAAAATAA+TGG - chr8_2:59330803-59330822 Msa1258170:CDS 30.0%
GCTATATATAAAGGCAGTGT+TGG - chr8_2:59329237-59329256 Msa1258170:three_prime_UTR 35.0%
! TTACTTTGAAGGACTTGCAT+TGG - chr8_2:59329279-59329298 Msa1258170:three_prime_UTR 35.0%
TTACCAATGGACAATGTTGT+TGG - chr8_2:59329399-59329418 Msa1258170:three_prime_UTR 35.0%
!!! GAATTTTGGTGTCAAAAACG+GGG + chr8_2:59329728-59329747 None:intergenic 35.0%
! GGATGAAGTACTACTATCAT+TGG + chr8_2:59330221-59330240 None:intergenic 35.0%
TTCACTTCATGGTTGTTAAC+AGG + chr8_2:59330265-59330284 None:intergenic 35.0%
TGTTAACAACCATGAAGTGA+AGG - chr8_2:59330264-59330283 Msa1258170:intron 35.0%
ATGAAGTGAAGGAAACTGAT+GGG - chr8_2:59330275-59330294 Msa1258170:intron 35.0%
!! ACATGAGTTTTATGCCTTCT+TGG - chr8_2:59330485-59330504 Msa1258170:intron 35.0%
!! CATGAGTTTTATGCCTTCTT+GGG - chr8_2:59330486-59330505 Msa1258170:intron 35.0%
CTATTTGATTGTCAGGACTT+TGG - chr8_2:59330526-59330545 Msa1258170:intron 35.0%
GACTTTGGTATTCATGACTT+TGG - chr8_2:59330541-59330560 Msa1258170:intron 35.0%
TCAAGTACACTGCAAACTAT+AGG - chr8_2:59330589-59330608 Msa1258170:intron 35.0%
CAAGTACACTGCAAACTATA+GGG - chr8_2:59330590-59330609 Msa1258170:intron 35.0%
CAAAGAATGTTCTTGGAAAG+TGG - chr8_2:59330730-59330749 Msa1258170:CDS 35.0%
TAGGAACATCATAAGAGGAA+AGG + chr8_2:59330764-59330783 None:intergenic 35.0%
TTCACTAGGAACATCATAAG+AGG + chr8_2:59330769-59330788 None:intergenic 35.0%
GCTATATATAAAGGCAGTGT+TGG - chr8_2:59329237-59329256 Msa1258170:three_prime_UTR 35.0%
! TTACTTTGAAGGACTTGCAT+TGG - chr8_2:59329279-59329298 Msa1258170:three_prime_UTR 35.0%
TTACCAATGGACAATGTTGT+TGG - chr8_2:59329399-59329418 Msa1258170:three_prime_UTR 35.0%
!!! GAATTTTGGTGTCAAAAACG+GGG + chr8_2:59329728-59329747 None:intergenic 35.0%
! GGATGAAGTACTACTATCAT+TGG + chr8_2:59330221-59330240 None:intergenic 35.0%
TTCACTTCATGGTTGTTAAC+AGG + chr8_2:59330265-59330284 None:intergenic 35.0%
TGTTAACAACCATGAAGTGA+AGG - chr8_2:59330264-59330283 Msa1258170:intron 35.0%
ATGAAGTGAAGGAAACTGAT+GGG - chr8_2:59330275-59330294 Msa1258170:intron 35.0%
!! ACATGAGTTTTATGCCTTCT+TGG - chr8_2:59330485-59330504 Msa1258170:intron 35.0%
!! CATGAGTTTTATGCCTTCTT+GGG - chr8_2:59330486-59330505 Msa1258170:intron 35.0%
CTATTTGATTGTCAGGACTT+TGG - chr8_2:59330526-59330545 Msa1258170:intron 35.0%
GACTTTGGTATTCATGACTT+TGG - chr8_2:59330541-59330560 Msa1258170:intron 35.0%
TCAAGTACACTGCAAACTAT+AGG - chr8_2:59330589-59330608 Msa1258170:intron 35.0%
CAAGTACACTGCAAACTATA+GGG - chr8_2:59330590-59330609 Msa1258170:intron 35.0%
CAAAGAATGTTCTTGGAAAG+TGG - chr8_2:59330730-59330749 Msa1258170:CDS 35.0%
TAGGAACATCATAAGAGGAA+AGG + chr8_2:59330764-59330783 None:intergenic 35.0%
TTCACTAGGAACATCATAAG+AGG + chr8_2:59330769-59330788 None:intergenic 35.0%
! CAACCTTGTTGTGACAAACT+TGG - chr8_2:59329320-59329339 Msa1258170:three_prime_UTR 40.0%
ACACCAAGTTTGTCACAACA+AGG + chr8_2:59329326-59329345 None:intergenic 40.0%
!! GACAAACTTGGTGTGAAGAA+AGG - chr8_2:59329332-59329351 Msa1258170:three_prime_UTR 40.0%
CTTCGTCCTGATTTAAAGAG+AGG - chr8_2:59329491-59329510 Msa1258170:three_prime_UTR 40.0%
AGGAGACCTCTCTTTAAATC+AGG + chr8_2:59329500-59329519 None:intergenic 40.0%
AAAAAACCTGTTGCCAAGAC+GGG + chr8_2:59329561-59329580 None:intergenic 40.0%
CAAAAAACCTGTTGCCAAGA+CGG + chr8_2:59329562-59329581 None:intergenic 40.0%
! TCTTAGACAGGGTTTTCTTG+TGG - chr8_2:59329860-59329879 Msa1258170:CDS 40.0%
TTAGTCTATGCAATTGCGCA+CGG + chr8_2:59330009-59330028 None:intergenic 40.0%
TAGTTGATTGTTGTCTCAGG+TGG - chr8_2:59330059-59330078 Msa1258170:CDS 40.0%
AATCTCATTGTCTGTTCTCC+CGG + chr8_2:59330107-59330126 None:intergenic 40.0%
CATCAGTTTCCTTCACTTCA+TGG + chr8_2:59330276-59330295 None:intergenic 40.0%
CATGAAGTGAAGGAAACTGA+TGG - chr8_2:59330274-59330293 Msa1258170:intron 40.0%
TGAAGTGAAGGAAACTGATG+GGG - chr8_2:59330276-59330295 Msa1258170:intron 40.0%
! TCCAGAAGAATTTTCAGCTG+GGG + chr8_2:59330332-59330351 None:intergenic 40.0%
! CTCCAGAAGAATTTTCAGCT+GGG + chr8_2:59330333-59330352 None:intergenic 40.0%
! TCTCCAGAAGAATTTTCAGC+TGG + chr8_2:59330334-59330353 None:intergenic 40.0%
ATGGTTGGATGAAACACCAT+TGG - chr8_2:59330408-59330427 Msa1258170:intron 40.0%
TGTAGTGTCCATTTCCCAAA+GGG + chr8_2:59330440-59330459 None:intergenic 40.0%
TGCTTGGCTATTTGATTGTC+AGG - chr8_2:59330519-59330538 Msa1258170:intron 40.0%
ACTGCAAACTATAGGGATGA+AGG - chr8_2:59330597-59330616 Msa1258170:intron 40.0%
!!! GGAGCTTCAATTTTAGCTCA+TGG + chr8_2:59330681-59330700 None:intergenic 40.0%
GAATGTTCTTGGAAAGTGGA+AGG - chr8_2:59330734-59330753 Msa1258170:CDS 40.0%
! CAACCTTGTTGTGACAAACT+TGG - chr8_2:59329320-59329339 Msa1258170:three_prime_UTR 40.0%
ACACCAAGTTTGTCACAACA+AGG + chr8_2:59329326-59329345 None:intergenic 40.0%
!! GACAAACTTGGTGTGAAGAA+AGG - chr8_2:59329332-59329351 Msa1258170:three_prime_UTR 40.0%
CTTCGTCCTGATTTAAAGAG+AGG - chr8_2:59329491-59329510 Msa1258170:three_prime_UTR 40.0%
AGGAGACCTCTCTTTAAATC+AGG + chr8_2:59329500-59329519 None:intergenic 40.0%
AAAAAACCTGTTGCCAAGAC+GGG + chr8_2:59329561-59329580 None:intergenic 40.0%
CAAAAAACCTGTTGCCAAGA+CGG + chr8_2:59329562-59329581 None:intergenic 40.0%
! TCTTAGACAGGGTTTTCTTG+TGG - chr8_2:59329860-59329879 Msa1258170:CDS 40.0%
TTAGTCTATGCAATTGCGCA+CGG + chr8_2:59330009-59330028 None:intergenic 40.0%
TAGTTGATTGTTGTCTCAGG+TGG - chr8_2:59330059-59330078 Msa1258170:CDS 40.0%
AATCTCATTGTCTGTTCTCC+CGG + chr8_2:59330107-59330126 None:intergenic 40.0%
CATCAGTTTCCTTCACTTCA+TGG + chr8_2:59330276-59330295 None:intergenic 40.0%
CATGAAGTGAAGGAAACTGA+TGG - chr8_2:59330274-59330293 Msa1258170:intron 40.0%
TGAAGTGAAGGAAACTGATG+GGG - chr8_2:59330276-59330295 Msa1258170:intron 40.0%
! TCCAGAAGAATTTTCAGCTG+GGG + chr8_2:59330332-59330351 None:intergenic 40.0%
! CTCCAGAAGAATTTTCAGCT+GGG + chr8_2:59330333-59330352 None:intergenic 40.0%
! TCTCCAGAAGAATTTTCAGC+TGG + chr8_2:59330334-59330353 None:intergenic 40.0%
ATGGTTGGATGAAACACCAT+TGG - chr8_2:59330408-59330427 Msa1258170:intron 40.0%
TGTAGTGTCCATTTCCCAAA+GGG + chr8_2:59330440-59330459 None:intergenic 40.0%
TGCTTGGCTATTTGATTGTC+AGG - chr8_2:59330519-59330538 Msa1258170:intron 40.0%
ACTGCAAACTATAGGGATGA+AGG - chr8_2:59330597-59330616 Msa1258170:intron 40.0%
!!! GGAGCTTCAATTTTAGCTCA+TGG + chr8_2:59330681-59330700 None:intergenic 40.0%
GAATGTTCTTGGAAAGTGGA+AGG - chr8_2:59330734-59330753 Msa1258170:CDS 40.0%
! TTGCATTGGTCGTGAGCTAT+GGG - chr8_2:59329293-59329312 Msa1258170:three_prime_UTR 45.0%
TTGGTGTGAAGAAAGGTCCA+TGG - chr8_2:59329339-59329358 Msa1258170:three_prime_UTR 45.0%
ACGCCAACAACATTGTCCAT+TGG + chr8_2:59329405-59329424 None:intergenic 45.0%
AAGATTGCTTCACGGTTACC+CGG - chr8_2:59330085-59330104 Msa1258170:CDS 45.0%
ATCTCATTGTCTGTTCTCCC+GGG + chr8_2:59330106-59330125 None:intergenic 45.0%
! CTGTGACGAATTTTCTGCAG+GGG + chr8_2:59330242-59330261 None:intergenic 45.0%
! GCTGTGACGAATTTTCTGCA+GGG + chr8_2:59330243-59330262 None:intergenic 45.0%
TCCCCAGCTGAAAATTCTTC+TGG - chr8_2:59330328-59330347 Msa1258170:intron 45.0%
GTTGGATGAAACACCATTGG+TGG - chr8_2:59330411-59330430 Msa1258170:intron 45.0%
GTGTAGTGTCCATTTCCCAA+AGG + chr8_2:59330441-59330460 None:intergenic 45.0%
!! GAGTTTTATGCCTTCTTGGG+AGG - chr8_2:59330489-59330508 Msa1258170:intron 45.0%
GCACAATTATCCTCCCAAGA+AGG + chr8_2:59330502-59330521 None:intergenic 45.0%
CTTGGGAGGATAATTGTGCT+TGG - chr8_2:59330503-59330522 Msa1258170:intron 45.0%
! TTGCATTGGTCGTGAGCTAT+GGG - chr8_2:59329293-59329312 Msa1258170:three_prime_UTR 45.0%
TTGGTGTGAAGAAAGGTCCA+TGG - chr8_2:59329339-59329358 Msa1258170:three_prime_UTR 45.0%
ACGCCAACAACATTGTCCAT+TGG + chr8_2:59329405-59329424 None:intergenic 45.0%
AAGATTGCTTCACGGTTACC+CGG - chr8_2:59330085-59330104 Msa1258170:CDS 45.0%
ATCTCATTGTCTGTTCTCCC+GGG + chr8_2:59330106-59330125 None:intergenic 45.0%
! CTGTGACGAATTTTCTGCAG+GGG + chr8_2:59330242-59330261 None:intergenic 45.0%
! GCTGTGACGAATTTTCTGCA+GGG + chr8_2:59330243-59330262 None:intergenic 45.0%
TCCCCAGCTGAAAATTCTTC+TGG - chr8_2:59330328-59330347 Msa1258170:intron 45.0%
GTTGGATGAAACACCATTGG+TGG - chr8_2:59330411-59330430 Msa1258170:intron 45.0%
GTGTAGTGTCCATTTCCCAA+AGG + chr8_2:59330441-59330460 None:intergenic 45.0%
!! GAGTTTTATGCCTTCTTGGG+AGG - chr8_2:59330489-59330508 Msa1258170:intron 45.0%
GCACAATTATCCTCCCAAGA+AGG + chr8_2:59330502-59330521 None:intergenic 45.0%
CTTGGGAGGATAATTGTGCT+TGG - chr8_2:59330503-59330522 Msa1258170:intron 45.0%
!!! TTTTTTTTTTTTTGTAAATA+TGG - chr8_2:59329976-59329995 Msa1258170:CDS 5.0%
!!! TTTTTTTTTTTTTGTAAATA+TGG - chr8_2:59329976-59329995 Msa1258170:CDS 5.0%
! CTTGCATTGGTCGTGAGCTA+TGG - chr8_2:59329292-59329311 Msa1258170:three_prime_UTR 50.0%
! TGCATTGGTCGTGAGCTATG+GGG - chr8_2:59329294-59329313 Msa1258170:three_prime_UTR 50.0%
TTGTCTTCCTCAGCTGTCCA+TGG + chr8_2:59329359-59329378 None:intergenic 50.0%
GTAAGAGCTGTCGTCTTCGT+TGG - chr8_2:59329459-59329478 Msa1258170:three_prime_UTR 50.0%
GGTGGTCGAAGATTGCTTCA+CGG - chr8_2:59330077-59330096 Msa1258170:CDS 50.0%
AGATTGCTTCACGGTTACCC+GGG - chr8_2:59330086-59330105 Msa1258170:CDS 50.0%
! GGCTGTGACGAATTTTCTGC+AGG + chr8_2:59330244-59330263 None:intergenic 50.0%
TGATGGGGTTGTCAACTCAG+AGG - chr8_2:59330291-59330310 Msa1258170:intron 50.0%
ACCATTGGTGGAAGCCCTTT+GGG - chr8_2:59330423-59330442 Msa1258170:intron 50.0%
! CTTGCATTGGTCGTGAGCTA+TGG - chr8_2:59329292-59329311 Msa1258170:three_prime_UTR 50.0%
! TGCATTGGTCGTGAGCTATG+GGG - chr8_2:59329294-59329313 Msa1258170:three_prime_UTR 50.0%
TTGTCTTCCTCAGCTGTCCA+TGG + chr8_2:59329359-59329378 None:intergenic 50.0%
GTAAGAGCTGTCGTCTTCGT+TGG - chr8_2:59329459-59329478 Msa1258170:three_prime_UTR 50.0%
GGTGGTCGAAGATTGCTTCA+CGG - chr8_2:59330077-59330096 Msa1258170:CDS 50.0%
AGATTGCTTCACGGTTACCC+GGG - chr8_2:59330086-59330105 Msa1258170:CDS 50.0%
! GGCTGTGACGAATTTTCTGC+AGG + chr8_2:59330244-59330263 None:intergenic 50.0%
TGATGGGGTTGTCAACTCAG+AGG - chr8_2:59330291-59330310 Msa1258170:intron 50.0%
ACCATTGGTGGAAGCCCTTT+GGG - chr8_2:59330423-59330442 Msa1258170:intron 50.0%
GAAAGGTCCATGGACAGCTG+AGG - chr8_2:59329349-59329368 Msa1258170:three_prime_UTR 55.0%
CGTGCTGTGCCTAAACTTGC+CGG - chr8_2:59329422-59329441 Msa1258170:three_prime_UTR 55.0%
TGCCTAAACTTGCCGGCCTT+CGG - chr8_2:59329429-59329448 Msa1258170:three_prime_UTR 55.0%
AGGTCTCCTCACTGAAGCAG+AGG - chr8_2:59329511-59329530 Msa1258170:three_prime_UTR 55.0%
GTTGATCTCCATGCCCGTCT+TGG - chr8_2:59329545-59329564 Msa1258170:three_prime_UTR 55.0%
CACCATTGGTGGAAGCCCTT+TGG - chr8_2:59330422-59330441 Msa1258170:intron 55.0%
TCCCAAAGGGCTTCCACCAA+TGG + chr8_2:59330427-59330446 None:intergenic 55.0%
! GGTGGAAGCCCTTTGGGAAA+TGG - chr8_2:59330429-59330448 Msa1258170:intron 55.0%
GAAAGGTCCATGGACAGCTG+AGG - chr8_2:59329349-59329368 Msa1258170:three_prime_UTR 55.0%
CGTGCTGTGCCTAAACTTGC+CGG - chr8_2:59329422-59329441 Msa1258170:three_prime_UTR 55.0%
TGCCTAAACTTGCCGGCCTT+CGG - chr8_2:59329429-59329448 Msa1258170:three_prime_UTR 55.0%
AGGTCTCCTCACTGAAGCAG+AGG - chr8_2:59329511-59329530 Msa1258170:three_prime_UTR 55.0%
GTTGATCTCCATGCCCGTCT+TGG - chr8_2:59329545-59329564 Msa1258170:three_prime_UTR 55.0%
CACCATTGGTGGAAGCCCTT+TGG - chr8_2:59330422-59330441 Msa1258170:intron 55.0%
TCCCAAAGGGCTTCCACCAA+TGG + chr8_2:59330427-59330446 None:intergenic 55.0%
! GGTGGAAGCCCTTTGGGAAA+TGG - chr8_2:59330429-59330448 Msa1258170:intron 55.0%
GCTGCTCCTCTGCTTCAGTG+AGG + chr8_2:59329520-59329539 None:intergenic 60.0%
TCCATGCCCGTCTTGGCAAC+AGG - chr8_2:59329552-59329571 Msa1258170:three_prime_UTR 60.0%
ACCTGTTGCCAAGACGGGCA+TGG + chr8_2:59329556-59329575 None:intergenic 60.0%
GCTGCTCCTCTGCTTCAGTG+AGG + chr8_2:59329520-59329539 None:intergenic 60.0%
TCCATGCCCGTCTTGGCAAC+AGG - chr8_2:59329552-59329571 Msa1258170:three_prime_UTR 60.0%
ACCTGTTGCCAAGACGGGCA+TGG + chr8_2:59329556-59329575 None:intergenic 60.0%
CGCCGAAGGCCGGCAAGTTT+AGG + chr8_2:59329434-59329453 None:intergenic 65.0%
! AGCTCTTACCGCAGCGCCGA+AGG + chr8_2:59329448-59329467 None:intergenic 65.0%
CGCCGAAGGCCGGCAAGTTT+AGG + chr8_2:59329434-59329453 None:intergenic 65.0%
! AGCTCTTACCGCAGCGCCGA+AGG + chr8_2:59329448-59329467 None:intergenic 65.0%
! CTTACCGCAGCGCCGAAGGC+CGG + chr8_2:59329444-59329463 None:intergenic 70.0%
! CTTACCGCAGCGCCGAAGGC+CGG + chr8_2:59329444-59329463 None:intergenic 70.0%
CTTGCCGGCCTTCGGCGCTG+CGG - chr8_2:59329437-59329456 Msa1258170:three_prime_UTR 75.0%
CTTGCCGGCCTTCGGCGCTG+CGG - chr8_2:59329437-59329456 Msa1258170:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 59329237 59331004 59329237 ID=Msa1258170;Name=Msa1258170
chr8_2 mRNA 59329237 59331004 59329237 ID=Msa1258170-mRNA-1;Parent=Msa1258170;Name=Msa1258170-mRNA-1;_AED=0.00;_eAED=0.00;_QI=74|1|1|1|1|1|2|377|270
chr8_2 exon 59329237 59330163 59329237 ID=Msa1258170-mRNA-1:exon:18427;Parent=Msa1258170-mRNA-1
chr8_2 exon 59330668 59331004 59330668 ID=Msa1258170-mRNA-1:exon:18426;Parent=Msa1258170-mRNA-1
chr8_2 five_prime_UTR 59330931 59331004 59330931 ID=Msa1258170-mRNA-1:five_prime_utr;Parent=Msa1258170-mRNA-1
chr8_2 CDS 59330668 59330930 59330668 ID=Msa1258170-mRNA-1:cds;Parent=Msa1258170-mRNA-1
chr8_2 CDS 59329614 59330163 59329614 ID=Msa1258170-mRNA-1:cds;Parent=Msa1258170-mRNA-1
chr8_2 three_prime_UTR 59329237 59329613 59329237 ID=Msa1258170-mRNA-1:three_prime_utr;Parent=Msa1258170-mRNA-1
Gene Sequence

>Msa1258170

ATGGGGAGACAACCTTGTTGTGACAAACTTGGTGTGAAGAAAGGTCCATGGACAGCTGAGGAAGACAAGAAACTCATCACTTTTATTCTTACCAATGGACAATGTTGTTGGCGTGCTGTGCCTAAACTTGCCGGCCTTCGGCGCTGCGGTAAGAGCTGTCGTCTTCGTTGGACTAATTATCTTCGTCCTGATTTAAAGAGAGGTCTCCTCACTGAAGCAGAGGAGCAGCTTGTTGTTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCGAAGATTGCTTCACGGTTACCCGGGAGAACAGACAATGAGATTAAAAATCATTGGAACACACACATCAAGAAAAAGCTCATTAAGATGGGAATTGATCCCATTACTCATGAACCTTTGAATAAACAAGCATCATCCAATGATAGTAGTACTTCATCCCCTGCAGAAAATTCGTCACAGCCTGTTAACAACCATGAAGTGAAGGAAACTGATGGGGTTGTCAACTCAGAGGAGAATTCAAGCTCATCCCCAGCTGAAAATTCTTCTGGAGAAGAATCACTTTTGCTAGATAGCATTTGCAGTGACGATTCTCTAATGAATAGTATATGGTTGGATGAAACACCATTGGTGGAAGCCCTTTGGGAAATGGACACTACACCTATAGCAGAAAACACAAAAAATGACATGAGTTTTATGCCTTCTTGGGAGGATAATTGTGCTTGGCTATTTGATTGTCAGGACTTTGGTATTCATGACTTTGGATTTAATTGTTTCAATGAGATAGAGTCAAGTACACTGCAAACTATAGGGATGAAGGAAAAATAA

Protein sequence

>Msa1258170

MGRQPCCDKLGVKKGPWTAEEDKKLITFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVVDLHARLGNRWSKIASRLPGRTDNEIKNHWNTHIKKKLIKMGIDPITHEPLNKQASSNDSSTSSPAENSSQPVNNHEVKETDGVVNSEENSSSSPAENSSGEESLLLDSICSDDSLMNSIWLDETPLVEALWEMDTTPIAENTKNDMSFMPSWEDNCAWLFDCQDFGIHDFGFNCFNEIESSTLQTIGMKEK*