AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0652450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652450 MtrunA17_Chr4g0046111 93.793 580 4 5 1 551 1 577 0.0 1093
Msa0652450 MtrunA17_Chr4g0002221 53.448 116 34 2 78 192 21 117 1.22e-27 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652450 AT2G34040.3 64.398 573 162 5 1 551 1 553 0.0 687
Msa0652450 AT2G34040.1 64.398 573 162 5 1 551 1 553 0.0 687
Msa0652450 AT1G29030.1 63.109 534 157 8 1 508 1 520 0.0 662
Msa0652450 AT1G29030.2 60.487 534 149 8 1 508 1 498 0.0 622
Msa0652450 AT2G34040.2 65.826 436 122 3 1 415 1 430 0.0 575
Msa0652450 AT3G19515.2 45.312 256 135 3 216 466 76 331 4.82e-61 216
Msa0652450 AT3G19515.2 35.338 133 63 1 12 121 1 133 2.32e-18 89.4
Msa0652450 AT1G23935.1 35.678 398 180 12 80 466 38 370 5.95e-54 197
Msa0652450 AT1G23935.3 35.474 327 148 10 80 403 38 304 3.20e-42 163
Msa0652450 AT1G23935.2 35.474 327 148 10 80 403 38 304 3.23e-42 163

Find 154 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTTGTTCACTTTGTTTC+AGG 0.173385 4_3:-60157034 Msa0652450:five_prime_UTR
TCCTCTATCGCATGCTTATT+TGG 0.174552 4_3:-60156947 Msa0652450:five_prime_UTR
CTGAAGAGTTTGAGCCTATT+TGG 0.180255 4_3:-60154673 Msa0652450:CDS
TATAGAATTTCGAATGTTTA+TGG 0.180281 4_3:-60154701 Msa0652450:CDS
TGGAGCAAGGGGCCGGGGCC+AGG 0.244195 4_3:-60149800 Msa0652450:CDS
AAGTTCTTTCCTGAACTTTC+CGG 0.262685 4_3:-60156617 Msa0652450:CDS
AAGGGGCCGGGGCCAGGGCC+AGG 0.263047 4_3:-60149794 Msa0652450:CDS
ATAAGAGAATCAACCTTTCT+TGG 0.268861 4_3:-60150216 Msa0652450:CDS
TTCAACAGTTCAGCTTTAAT+AGG 0.270887 4_3:+60154893 None:intergenic
CAGGGCCAGGGCCAAGGCTG+GGG 0.271728 4_3:-60149781 Msa0652450:CDS
ATAGATAAGATCTAATTTCT+TGG 0.271909 4_3:-60149691 Msa0652450:three_prime_UTR
CATTGGAAGCTTCTTCGTTC+TGG 0.276358 4_3:+60156900 None:intergenic
CCCAGCCTTGGCCCTGGCCC+TGG 0.281727 4_3:+60149782 None:intergenic
TGTGGTTACAAAATTGTTAC+TGG 0.288890 4_3:-60151565 Msa0652450:CDS
TTGAAGAAGGGTCGAGGTTC+TGG 0.305212 4_3:-60149907 Msa0652450:CDS
GCCAGGGCCAGGGCCAAGGC+TGG 0.308243 4_3:-60149783 Msa0652450:CDS
ATTATTGTACTAAAATTCTT+TGG 0.311546 4_3:-60149636 Msa0652450:three_prime_UTR
GTGTCGTTCCATTTCCTCTT+GGG 0.311853 4_3:+60154868 None:intergenic
ACTCAATACTCATCTTGATT+TGG 0.327382 4_3:-60156588 Msa0652450:intron
AAGAAGTCCTATTTGTATTC+CGG 0.329262 4_3:+60149660 None:intergenic
CCAGGGCCAGGGCCAAGGCT+GGG 0.335906 4_3:-60149782 Msa0652450:CDS
TGTTATTCCTGCCAGCTTCC+TGG 0.336157 4_3:-60153607 Msa0652450:intron
CTTCTTCAATGCAATATTGT+TGG 0.340511 4_3:+60149921 None:intergenic
CAAATAGGCTCAAACTCTTC+AGG 0.344533 4_3:+60154674 None:intergenic
AGAGGTGGAGCAAGGGGCCG+GGG 0.351067 4_3:-60149805 Msa0652450:CDS
CGGGGCCAGGGCCAGGGCCA+AGG 0.359678 4_3:-60149787 Msa0652450:CDS
TTTGTAACCACATAAACTAT+TGG 0.362776 4_3:+60151576 None:intergenic
GGCTGAAAACAACAAATCTA+TGG 0.365544 4_3:-60150600 Msa0652450:CDS
CAGAGTTTAGAAGATGTAAC+TGG 0.369726 4_3:-60154724 Msa0652450:CDS
CATCGTCAAAATATTATTGC+AGG 0.371200 4_3:+60150410 None:intergenic
AAAGTACTTACCACAACAAT+TGG 0.378420 4_3:+60154296 None:intergenic
ATCGAGAAGCTCTACCAATA+TGG 0.380527 4_3:-60156847 Msa0652450:CDS
TGTGTCGTTCCATTTCCTCT+TGG 0.385006 4_3:+60154867 None:intergenic
GGCCAAGGCTGGGGTGGTCG+CGG 0.386215 4_3:-60149772 Msa0652450:CDS
GGCCAGGGCCAAGGCTGGGG+TGG 0.389933 4_3:-60149778 Msa0652450:CDS
GGCTGGGGTGGTCGCGGAAG+AGG 0.390669 4_3:-60149766 Msa0652450:CDS
AGGGGCCGGGGCCAGGGCCA+GGG 0.391231 4_3:-60149793 Msa0652450:CDS
TCAACAGTTCAGCTTTAATA+GGG 0.391621 4_3:+60154894 None:intergenic
TTTAACCTGAGATTTGTCTT+TGG 0.398392 4_3:+60156807 None:intergenic
AAGGATACACCTGAGAATAT+TGG 0.399203 4_3:-60156373 Msa0652450:CDS
TTCCGCGACCACCCCAGCCT+TGG 0.399520 4_3:+60149770 None:intergenic
GTTGAAGCCCCAAGAGGAAA+TGG 0.404679 4_3:-60154876 Msa0652450:CDS
AGAGCACTAGGTGGATTATC+TGG 0.406523 4_3:-60149859 Msa0652450:CDS
AGTTGAGTTGCTCGCCATAT+TGG 0.407050 4_3:+60156833 None:intergenic
TAGAGGTGGAGCAAGGGGCC+GGG 0.407788 4_3:-60149806 Msa0652450:CDS
TCTTGTGCAACTTCTTTCCT+CGG 0.408538 4_3:-60156335 Msa0652450:CDS
TTCAGCAACTGAACAATAGA+AGG 0.408687 4_3:+60153505 None:intergenic
CTGATTTGAATTTGATTTGA+GGG 0.411578 4_3:+60156980 None:intergenic
TGCGGTAGTTGATGCAGATT+TGG 0.413366 4_3:+60150183 None:intergenic
CTCGATGTAAGCAGCTTCTT+CGG 0.414250 4_3:+60156864 None:intergenic
AATATTGTTGGATCCATTGC+CGG 0.421230 4_3:+60149933 None:intergenic
GTAGAGGTGGAGCAAGGGGC+CGG 0.423455 4_3:-60149807 Msa0652450:CDS
AGTGCAAGACCGGAAAGTTC+AGG 0.423488 4_3:+60156608 None:intergenic
AGAGGAAGTGGAAGAGGTAG+AGG 0.424791 4_3:-60149748 Msa0652450:CDS
ACCAAATAAGCATGCGATAG+AGG 0.424815 4_3:+60156946 None:intergenic
GGAGCAAGGGGCCGGGGCCA+GGG 0.425022 4_3:-60149799 Msa0652450:CDS
AAAGGTTTACCTTGTGAGCT+AGG 0.427066 4_3:+60151689 None:intergenic
TCGGAAGGTTCAGTAGTCAT+TGG 0.427839 4_3:+60156883 None:intergenic
TGTAAAATTCATCTCTTCTC+CGG 0.428906 4_3:+60151744 None:intergenic
GACTGTACCGGAATACAAAT+AGG 0.429536 4_3:-60149667 Msa0652450:three_prime_UTR
CTTGGCCCTGGCCCTGGCCC+CGG 0.430116 4_3:+60149788 None:intergenic
CATAAACTATTGGTGGCATT+AGG 0.430397 4_3:+60151586 None:intergenic
GGAGGAAGAGGCAGAGTCTC+TGG 0.433047 4_3:-60149835 Msa0652450:CDS
TTTGAGCCTATTTGGAGAAA+AGG 0.433300 4_3:-60154665 Msa0652450:CDS
AGAGTCTCTGGTGGAGGTAG+AGG 0.435438 4_3:-60149823 Msa0652450:CDS
TACATGACTTGGAAGAAAAC+CGG 0.437540 4_3:-60151763 Msa0652450:CDS
GACCACCCCAGCCTTGGCCC+TGG 0.437792 4_3:+60149776 None:intergenic
GAGGTAGAGGTAGAGGGTAT+TGG 0.448376 4_3:-60149735 Msa0652450:CDS
TGGTTGCTTCTTTCCAAGAA+AGG 0.448903 4_3:+60150203 None:intergenic
AGTGGAAGAGGTAGAGGTAG+AGG 0.449138 4_3:-60149742 Msa0652450:CDS
TTACTGGCCAGCCATCTGAT+AGG 0.452743 4_3:-60151549 Msa0652450:CDS
TGCTAAAACTGATGAAGAAA+AGG 0.453582 4_3:-60150573 Msa0652450:CDS
CAACTACCGCACATGCTGTT+GGG 0.455294 4_3:-60150171 Msa0652450:intron
TGATTCCCGCTTGCATCAAA+AGG 0.455735 4_3:+60149511 None:intergenic
CAACAATATTGCATTGAAGA+AGG 0.456268 4_3:-60149920 Msa0652450:CDS
GGAAAGAACTTGAAGAACTT+AGG 0.456756 4_3:+60156629 None:intergenic
AACATTCTACATATCAGAAA+TGG 0.457489 4_3:+60149417 None:intergenic
TCTGATGTCTCTGCTGAGGC+AGG 0.468867 4_3:-60156189 Msa0652450:CDS
AATGCCACCAATAGTTTATG+TGG 0.470729 4_3:-60151583 Msa0652450:CDS
CGCGGAAGAGGAAGTGGAAG+AGG 0.472771 4_3:-60149754 Msa0652450:CDS
GATCCATTGCCGGTAGTAGC+AGG 0.473237 4_3:+60149943 None:intergenic
GGTGGTCGCGGAAGAGGAAG+TGG 0.474401 4_3:-60149760 Msa0652450:CDS
TAATGTTGAAGAGCAAAATT+CGG 0.475477 4_3:-60155048 Msa0652450:CDS
GGATTATCTGGTGGAGGAAG+AGG 0.479757 4_3:-60149847 Msa0652450:CDS
ATCAAACAGATCATATTCAT+AGG 0.483162 4_3:-60154346 Msa0652450:CDS
GGCCAGCCATCTGATAGGCT+TGG 0.484204 4_3:-60151544 Msa0652450:CDS
TCTGATTTGAATTTGATTTG+AGG 0.486255 4_3:+60156979 None:intergenic
AGCTCTTCCATACGCTCAGC+TGG 0.487308 4_3:+60154640 None:intergenic
CTTGTGCAACTTCTTTCCTC+GGG 0.493032 4_3:-60156334 Msa0652450:intron
GTGGAGGTAGAGGTGGAGCA+AGG 0.494022 4_3:-60149813 Msa0652450:CDS
CAACTTGTCAATAGAGCACT+AGG 0.496196 4_3:-60149871 Msa0652450:CDS
GGATGACCTTAGTCGTGAAA+AGG 0.497612 4_3:-60155027 Msa0652450:CDS
TAATTTCTTGATTGTAGCCC+GGG 0.498079 4_3:+60150634 None:intergenic
GTACTAAAATTCTTTGGCAG+AGG 0.500387 4_3:-60149630 Msa0652450:three_prime_UTR
ATGAGTATTGAGTGCAAGAC+CGG 0.502685 4_3:+60156598 None:intergenic
TGACAAGTGGATTTATATGA+AGG 0.503577 4_3:-60149440 Msa0652450:three_prime_UTR
TCAACTACCGCACATGCTGT+TGG 0.504673 4_3:-60150172 Msa0652450:CDS
TAATTTCTTGGAGACTGTAC+CGG 0.504921 4_3:-60149679 Msa0652450:three_prime_UTR
TTCTATTGTTCAGTTGCTGA+AGG 0.506926 4_3:-60153503 Msa0652450:intron
GTAACCACATAAACTATTGG+TGG 0.507469 4_3:+60151579 None:intergenic
ACTTTGTTTAAGCACATTCG+TGG 0.507835 4_3:-60155071 Msa0652450:CDS
CTCCAAGCCTATCAGATGGC+TGG 0.509361 4_3:+60151542 None:intergenic
CGGCCTGCTACTACCGGCAA+TGG 0.510354 4_3:-60149946 Msa0652450:CDS
GAGCTGCTTGGAATCATTGA+AGG 0.510702 4_3:-60154622 Msa0652450:CDS
ACTGAACATCTTATGCCCCT+TGG 0.512771 4_3:-60149484 Msa0652450:three_prime_UTR
TTTACTTCTGCAGAGCGAAA+CGG 0.514981 4_3:-60149966 Msa0652450:intron
GTCTCTGGTGGAGGTAGAGG+TGG 0.515825 4_3:-60149820 Msa0652450:CDS
TGGAGGTAGAGGTGGAGCAA+GGG 0.517601 4_3:-60149812 Msa0652450:CDS
TGTCGTTCCATTTCCTCTTG+GGG 0.527654 4_3:+60154869 None:intergenic
AAAGGCTCCAGCTGAGCGTA+TGG 0.527823 4_3:-60154647 Msa0652450:CDS
CTCTTATCTCCAATAAAAGA+AGG 0.529752 4_3:+60150232 None:intergenic
GAGCGTATGGAAGAGCTGCT+TGG 0.531459 4_3:-60154634 Msa0652450:CDS
TTAATTTCTTGATTGTAGCC+CGG 0.533817 4_3:+60150633 None:intergenic
AACAATATTGCATTGAAGAA+GGG 0.536121 4_3:-60149919 Msa0652450:CDS
CATTTCATAATGCTTTAAGC+GGG 0.542084 4_3:+60149393 None:intergenic
CAAGAAATTAACTCAAGGAA+TGG 0.547093 4_3:-60150621 Msa0652450:CDS
CATGGCACTTCCAATTGTTG+TGG 0.547852 4_3:-60154306 Msa0652450:intron
CTCTTCCAAAGACAAATCTC+AGG 0.550702 4_3:-60156812 Msa0652450:intron
CAGAACGTCAAGGATTATCA+AGG 0.554085 4_3:-60156710 Msa0652450:CDS
GGAGGTAGAGGTGGAGCAAG+GGG 0.554761 4_3:-60149811 Msa0652450:CDS
AGAGGCAGAGTCTCTGGTGG+AGG 0.557524 4_3:-60149829 Msa0652450:CDS
TCATTTCATAATGCTTTAAG+CGG 0.566933 4_3:+60149392 None:intergenic
GCATGTAATGTAATGACAAG+TGG 0.567871 4_3:-60149453 Msa0652450:three_prime_UTR
GGAGCGTGATGCTGTGCATA+AGG 0.570343 4_3:-60156213 Msa0652450:CDS
CTAGGTGGATTATCTGGTGG+AGG 0.577466 4_3:-60149853 Msa0652450:CDS
ATGTAAGCAGCTTCTTCGGA+AGG 0.580643 4_3:+60156868 None:intergenic
AAAACGTTGAGGAGTTCACC+CGG 0.582162 4_3:-60150652 Msa0652450:CDS
GCGAAACGGCCTGCTACTAC+CGG 0.584616 4_3:-60149952 Msa0652450:CDS
GACCTGAAACAAAGTGAACA+AGG 0.591509 4_3:+60157032 None:intergenic
GTGGAAGAGGTAGAGGTAGA+GGG 0.593366 4_3:-60149741 Msa0652450:CDS
ATTGCATTGAAGAAGGGTCG+AGG 0.602060 4_3:-60149913 Msa0652450:CDS
GAATCTTGTGGTGTTGTGAA+AGG 0.604189 4_3:+60153541 None:intergenic
ACAATCAAGAAATTAACTCA+AGG 0.611947 4_3:-60150626 Msa0652450:CDS
ATTTCATCACCTAGCTCACA+AGG 0.613487 4_3:-60151698 Msa0652450:intron
CAATTGGAAGTGCCATGTGA+AGG 0.614103 4_3:+60154312 None:intergenic
AAGAAGGGTCGAGGTTCTGG+TGG 0.621072 4_3:-60149904 Msa0652450:CDS
AAACGAGTAATCACATTGAA+CGG 0.622809 4_3:+60154580 None:intergenic
TGAAAGGTGAAAACTCTGCA+AGG 0.622969 4_3:+60153557 None:intergenic
TTACATGCATACATAACCAA+GGG 0.626427 4_3:+60149468 None:intergenic
CTGCTGAGGCAGGATGTGAA+AGG 0.630646 4_3:-60156179 Msa0652450:intron
ATTACATGCATACATAACCA+AGG 0.636612 4_3:+60149467 None:intergenic
GTTGATATCATGCCTTCACA+TGG 0.637100 4_3:-60154324 Msa0652450:CDS
AGGCTCTGATGTCTCTGCTG+AGG 0.641155 4_3:-60156193 Msa0652450:CDS
TCTTCTCCAAGCCTATCAGA+TGG 0.644984 4_3:+60151538 None:intergenic
GGAAGAGGCAGAGTCTCTGG+TGG 0.645079 4_3:-60149832 Msa0652450:CDS
AGCATTTGTCGTGAATCTTG+TGG 0.650972 4_3:+60153529 None:intergenic
CATTCTACAGAAACAAACTT+CGG 0.652036 4_3:+60149557 None:intergenic
ACAATACCCAACAGCATGTG+CGG 0.655724 4_3:+60150165 None:intergenic
GCACTAGGTGGATTATCTGG+TGG 0.656570 4_3:-60149856 Msa0652450:CDS
TGAACTGTTGAAGCCCCAAG+AGG 0.674998 4_3:-60154882 Msa0652450:CDS
ACCTGAAACAAAGTGAACAA+GGG 0.682642 4_3:+60157033 None:intergenic
AAACGTTGAGGAGTTCACCC+GGG 0.696711 4_3:-60150651 Msa0652450:CDS
CTTGTCAATAGAGCACTAGG+TGG 0.697757 4_3:-60149868 Msa0652450:CDS
TACATGCATACATAACCAAG+GGG 0.720060 4_3:+60149469 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTATATAGAAGAT+AGG + chr4_3:60150992-60151011 None:intergenic 10.0%
!! ATATAAAATAAATTATAGAG+AGG - chr4_3:60150999-60151018 Msa0652450:intron 10.0%
!! TATAAAATAAATTATAGAGA+GGG - chr4_3:60151000-60151019 Msa0652450:intron 10.0%
!! AACATCTAATTTATATTATA+CGG + chr4_3:60151159-60151178 None:intergenic 10.0%
!!! ATAATTTATTCATCAAATTT+TGG - chr4_3:60154414-60154433 Msa0652450:intron 10.0%
!!! GCTAAATATTTTTTTTAAAA+AGG + chr4_3:60156185-60156204 None:intergenic 10.0%
!!! TTCGTTTTTTCATTTATTTA+GGG - chr4_3:60149771-60149790 Msa0652450:CDS 15.0%
!! TTTCAACTTTATTCTAAATT+AGG - chr4_3:60149801-60149820 Msa0652450:CDS 15.0%
!! TTCAACTTTATTCTAAATTA+GGG - chr4_3:60149802-60149821 Msa0652450:CDS 15.0%
!!! AATCTTTTTTTTAAGATCAA+AGG - chr4_3:60150602-60150621 Msa0652450:CDS 15.0%
!!! TATAAATTTTGTTAGAGATA+AGG - chr4_3:60151545-60151564 Msa0652450:CDS 15.0%
!!! GAATACATTTTTTATTAGAT+CGG + chr4_3:60151710-60151729 None:intergenic 15.0%
!!! TGAATATTTTGTAACATAAT+TGG - chr4_3:60151781-60151800 Msa0652450:intron 15.0%
!! AATAAAAAAAAACACAGAAA+TGG + chr4_3:60152001-60152020 None:intergenic 15.0%
!! TAAACATTTCTTAAAGAATA+TGG - chr4_3:60153068-60153087 Msa0652450:intron 15.0%
!! TGTTATATTGTGTTTAAATT+TGG + chr4_3:60154702-60154721 None:intergenic 15.0%
!! AAATTTAAACACAATATAAC+AGG - chr4_3:60154701-60154720 Msa0652450:CDS 15.0%
!! AATTTAAACACAATATAACA+GGG - chr4_3:60154702-60154721 Msa0652450:CDS 15.0%
!! AATTCAATAATTAAAAGATC+AGG + chr4_3:60156259-60156278 None:intergenic 15.0%
!! ATTATTGTACTAAAATTCTT+TGG - chr4_3:60156912-60156931 Msa0652450:five_prime_UTR 15.0%
!! AGCAAAAAAAAATACAGATA+GGG + chr4_3:60149547-60149566 None:intergenic 20.0%
!! AAGCAAAAAAAAATACAGAT+AGG + chr4_3:60149548-60149567 None:intergenic 20.0%
!!! CTTCGTTTTTTCATTTATTT+AGG - chr4_3:60149770-60149789 Msa0652450:CDS 20.0%
!! TGATTACACTGAATTATTAT+CGG + chr4_3:60150036-60150055 None:intergenic 20.0%
!!! GATTTTTTTAGATGAATTTG+TGG - chr4_3:60150314-60150333 Msa0652450:intron 20.0%
!! ATGTCAATTATAGAAGATAT+TGG - chr4_3:60150407-60150426 Msa0652450:CDS 20.0%
!!! ACATAATTCTAAAATGTTTG+AGG + chr4_3:60150671-60150690 None:intergenic 20.0%
!!! ATTTTATATAGAAGATAGGT+TGG + chr4_3:60150988-60151007 None:intergenic 20.0%
!! AAATGTTATGCACATTAAAT+AGG + chr4_3:60151053-60151072 None:intergenic 20.0%
!!! ATTGTTTTCATTGAAGATAT+TGG - chr4_3:60151084-60151103 Msa0652450:intron 20.0%
!!! TACAAGAATGAGATTAATTT+TGG - chr4_3:60151294-60151313 Msa0652450:intron 20.0%
!! TTCATAATTACACTACTATA+AGG + chr4_3:60151441-60151460 None:intergenic 20.0%
!! TCTAAATGTCTTCAATATAT+AGG - chr4_3:60151627-60151646 Msa0652450:intron 20.0%
!! TATAGAATTTCGAATGTTTA+TGG - chr4_3:60151847-60151866 Msa0652450:intron 20.0%
!!! TTATTTAACTGATGATTTGT+AGG - chr4_3:60152167-60152186 Msa0652450:intron 20.0%
!! AAAAAGTAACAATAAGATTG+TGG - chr4_3:60152545-60152564 Msa0652450:intron 20.0%
!!! ATATCTATGATGATTTTTAC+TGG - chr4_3:60152820-60152839 Msa0652450:intron 20.0%
!! CTATGAATATTAACAATCAA+AGG - chr4_3:60153237-60153256 Msa0652450:intron 20.0%
!!! TTAATTTTTTCATGAAAACC+CGG - chr4_3:60153668-60153687 Msa0652450:intron 20.0%
!!! ATTGATTTGAAATTAAAGAG+TGG - chr4_3:60154640-60154659 Msa0652450:CDS 20.0%
!!! TTTTTTTACTGGTCTAAAAA+AGG + chr4_3:60154880-60154899 None:intergenic 20.0%
!!! TCATTTAGGATAAAAAATGA+GGG - chr4_3:60155160-60155179 Msa0652450:intron 20.0%
!! TTGTAATAAAATTTCAGTTC+AGG - chr4_3:60155609-60155628 Msa0652450:intron 20.0%
!! TAATTGTTATGTTACATTTC+TGG - chr4_3:60155845-60155864 Msa0652450:intron 20.0%
!! AATAATTAAAAGATCAGGAA+GGG + chr4_3:60156254-60156273 None:intergenic 20.0%
!! ATTGAATTGTTCAATTTGTA+TGG - chr4_3:60156271-60156290 Msa0652450:intron 20.0%
!! ATAGATAAGATCTAATTTCT+TGG - chr4_3:60156857-60156876 Msa0652450:CDS 20.0%
!!! TTCGTTTTGATTTGATTTTG+AGG + chr4_3:60149487-60149506 None:intergenic 25.0%
!!! CTGATTTGAATTTGATTTGA+GGG + chr4_3:60149571-60149590 None:intergenic 25.0%
!!! TCTGATTTGAATTTGATTTG+AGG + chr4_3:60149572-60149591 None:intergenic 25.0%
!! CTATATTTGAAATTACCTGA+AGG - chr4_3:60150440-60150459 Msa0652450:CDS 25.0%
!!! TAATTCTAAAATGTTTGAGG+AGG + chr4_3:60150668-60150687 None:intergenic 25.0%
!! TTGAGCCTTTTTGATATATA+TGG - chr4_3:60151119-60151138 Msa0652450:intron 25.0%
! CAATGCCATATATATCAAAA+AGG + chr4_3:60151127-60151146 None:intergenic 25.0%
! GAAAAAAGTTTCAAAGAGTT+TGG + chr4_3:60151349-60151368 None:intergenic 25.0%
! TAATGTTGAAGAGCAAAATT+CGG - chr4_3:60151500-60151519 Msa0652450:intron 25.0%
!!! GTTTTTTACCAGTTCATTTA+CGG - chr4_3:60151746-60151765 Msa0652450:CDS 25.0%
!! TTGATTTTAGACTTCTATTC+TGG - chr4_3:60152090-60152109 Msa0652450:intron 25.0%
! ATCAAACAGATCATATTCAT+AGG - chr4_3:60152202-60152221 Msa0652450:intron 25.0%
!!! AGATTGTTTGGTTTGAATAT+TGG - chr4_3:60152419-60152438 Msa0652450:intron 25.0%
!!! ATTGGAGTTTTCTTGTTTTT+TGG - chr4_3:60152437-60152456 Msa0652450:intron 25.0%
!!! TTGGAGTTTTCTTGTTTTTT+GGG - chr4_3:60152438-60152457 Msa0652450:intron 25.0%
! GAATCTATTTGTAACAAGTT+TGG + chr4_3:60153345-60153364 None:intergenic 25.0%
! ACATATTTACTAAGTGTGTT+TGG + chr4_3:60153549-60153568 None:intergenic 25.0%
! GAAGTTTGAACCAATAAAAT+CGG - chr4_3:60153586-60153605 Msa0652450:CDS 25.0%
!!! GAAATCATAACCGATTTTAT+TGG + chr4_3:60153599-60153618 None:intergenic 25.0%
!! GTAAGAGATAAAGTTATTTC+AGG + chr4_3:60153623-60153642 None:intergenic 25.0%
!!! TAATTTTTTCATGAAAACCC+GGG - chr4_3:60153669-60153688 Msa0652450:intron 25.0%
! TTACTCCAAAAACTCAAATT+AGG + chr4_3:60153755-60153774 None:intergenic 25.0%
! GGATTACTTTATGAAAACAA+AGG + chr4_3:60153983-60154002 None:intergenic 25.0%
! TAACTATATAAAGATTGCAC+CGG + chr4_3:60154011-60154030 None:intergenic 25.0%
!!! TTCTAGTTTATGCTGTTATT+TGG - chr4_3:60154262-60154281 Msa0652450:intron 25.0%
!! TCTTACCTTCATTCTTTTTA+TGG - chr4_3:60154346-60154365 Msa0652450:CDS 25.0%
! ATGTTCAATCACCAAAATAT+TGG - chr4_3:60154483-60154502 Msa0652450:intron 25.0%
!! TCAATGCAAATCCAATATTT+TGG + chr4_3:60154497-60154516 None:intergenic 25.0%
!! ATCGATTCAAATGAATTTGT+AGG + chr4_3:60154524-60154543 None:intergenic 25.0%
!!! TTTTGATTAAAGTCCAGTTA+TGG - chr4_3:60154564-60154583 Msa0652450:intron 25.0%
! GTAACAATTTAATCCATAAC+TGG + chr4_3:60154580-60154599 None:intergenic 25.0%
! AATTAACTGTTAGTAATCAC+TGG - chr4_3:60154666-60154685 Msa0652450:CDS 25.0%
!!! ACAGCTTGATATTTTTTTAC+TGG + chr4_3:60154891-60154910 None:intergenic 25.0%
! TTTGTAACCACATAAACTAT+TGG + chr4_3:60154975-60154994 None:intergenic 25.0%
!! GTCATTTAGGATAAAAAATG+AGG - chr4_3:60155159-60155178 Msa0652450:intron 25.0%
!! CATTTAGGATAAAAAATGAG+GGG - chr4_3:60155161-60155180 Msa0652450:intron 25.0%
!! ATATTTTACCCTAAACTCAA+AGG + chr4_3:60155276-60155295 None:intergenic 25.0%
! AATTGACTACACTAGAAAAT+AGG - chr4_3:60155468-60155487 Msa0652450:intron 25.0%
! CAATATTACTATGACACATA+AGG + chr4_3:60155661-60155680 None:intergenic 25.0%
! CTTATGTGTCATAGTAATAT+TGG - chr4_3:60155659-60155678 Msa0652450:intron 25.0%
!! ATGAGAAGTGTATTAGTAAA+TGG + chr4_3:60155758-60155777 None:intergenic 25.0%
! ACAATCAAGAAATTAACTCA+AGG - chr4_3:60155922-60155941 Msa0652450:intron 25.0%
!!! TAATATTTTGACGATGACAA+AGG - chr4_3:60156145-60156164 Msa0652450:intron 25.0%
! CAATAATTAAAAGATCAGGA+AGG + chr4_3:60156255-60156274 None:intergenic 25.0%
!!! TTAAAGATCTTGTGTTGATT+TGG - chr4_3:60156519-60156538 Msa0652450:intron 25.0%
! AACAATATTGCATTGAAGAA+GGG - chr4_3:60156629-60156648 Msa0652450:CDS 25.0%
! AACATTCTACATATCAGAAA+TGG + chr4_3:60157134-60157153 None:intergenic 25.0%
!! TCATTTCATAATGCTTTAAG+CGG + chr4_3:60157159-60157178 None:intergenic 25.0%
TTTAACCTGAGATTTGTCTT+TGG + chr4_3:60149744-60149763 None:intergenic 30.0%
ACTCAATACTCATCTTGATT+TGG - chr4_3:60149960-60149979 Msa0652450:intron 30.0%
! GTGTTTTTCTATTACTGTAC+AGG - chr4_3:60150114-60150133 Msa0652450:intron 30.0%
TTTCTATTACTGTACAGGTT+CGG - chr4_3:60150119-60150138 Msa0652450:intron 30.0%
ACCTGAGAATATTGGAAAAA+TGG - chr4_3:60150183-60150202 Msa0652450:CDS 30.0%
!! ACCATTTTTCCAATATTCTC+AGG + chr4_3:60150187-60150206 None:intergenic 30.0%
TTATTGATCAAAGATCCTTC+AGG + chr4_3:60150458-60150477 None:intergenic 30.0%
!!! ACTAGTTTTACCACTATAAG+GGG + chr4_3:60150963-60150982 None:intergenic 30.0%
!!! CACTAGTTTTACCACTATAA+GGG + chr4_3:60150964-60150983 None:intergenic 30.0%
!!! TGAAGATATTGGTTTTGCAA+TGG - chr4_3:60151095-60151114 Msa0652450:intron 30.0%
!!! GAAGATATTGGTTTTGCAAT+GGG - chr4_3:60151096-60151115 Msa0652450:intron 30.0%
! CAAGTTTTACTACCACTTAA+AGG + chr4_3:60151252-60151271 None:intergenic 30.0%
TTAATCTCATTCTTGTAGCA+AGG + chr4_3:60151291-60151310 None:intergenic 30.0%
AAAATATGCTTTCCAGATTC+TGG - chr4_3:60151382-60151401 Msa0652450:intron 30.0%
! TTATAACCTTTTCACGACTA+AGG + chr4_3:60151530-60151549 None:intergenic 30.0%
CAACAAAATAACCAATCACA+TGG + chr4_3:60151578-60151597 None:intergenic 30.0%
! TCAACAGTTCAGCTTTAATA+GGG + chr4_3:60151657-60151676 None:intergenic 30.0%
! TTCAACAGTTCAGCTTTAAT+AGG + chr4_3:60151658-60151677 None:intergenic 30.0%
TAATCAATCCGTAAATGAAC+TGG + chr4_3:60151757-60151776 None:intergenic 30.0%
AAACGAGTAATCACATTGAA+CGG + chr4_3:60151971-60151990 None:intergenic 30.0%
AAAACTGTGCAAATAAGTTG+AGG - chr4_3:60152125-60152144 Msa0652450:intron 30.0%
! AAACTGTGCAAATAAGTTGA+GGG - chr4_3:60152126-60152145 Msa0652450:intron 30.0%
! AAAGTACTTACCACAACAAT+TGG + chr4_3:60152255-60152274 None:intergenic 30.0%
!!! TATTATACCTGTTTTTGACC+AGG - chr4_3:60152391-60152410 Msa0652450:intron 30.0%
AACCAAACAATCTAATTACC+TGG + chr4_3:60152412-60152431 None:intergenic 30.0%
AAGTAACAATAAGATTGTGG+TGG - chr4_3:60152548-60152567 Msa0652450:intron 30.0%
! TTAGTCATAAGTTCTGCTTT+TGG - chr4_3:60152587-60152606 Msa0652450:intron 30.0%
!! TATAATTTTGACACGATTCC+AGG + chr4_3:60152726-60152745 None:intergenic 30.0%
AATCGTGTCAAAATTATAGC+CGG - chr4_3:60152728-60152747 Msa0652450:intron 30.0%
TTAAACTAAAGAAACGTAGC+CGG + chr4_3:60152765-60152784 None:intergenic 30.0%
TAACTTCATAGATCTTGGAT+TGG - chr4_3:60152844-60152863 Msa0652450:intron 30.0%
CTTAAAGAATATGGCATGAT+TGG - chr4_3:60153077-60153096 Msa0652450:intron 30.0%
TAATGAATAAGCACTAACCT+AGG - chr4_3:60153202-60153221 Msa0652450:intron 30.0%
AAAGGAAGTTGTACATTGAA+AGG - chr4_3:60153255-60153274 Msa0652450:intron 30.0%
!! GATTTTAAGAAGCTGAGAAT+TGG + chr4_3:60153469-60153488 None:intergenic 30.0%
TTCTCAGCTTCTTAAAATCA+CGG - chr4_3:60153470-60153489 Msa0652450:intron 30.0%
TCAAACTTCAAACGATCAAT+TGG + chr4_3:60153575-60153594 None:intergenic 30.0%
! TTGGAGGAAATTTGATTTCA+TGG + chr4_3:60153874-60153893 None:intergenic 30.0%
AAATCAAATTTCCTCCAATG+AGG - chr4_3:60153876-60153895 Msa0652450:intron 30.0%
TCATAAAGTAATCCTTTACC+CGG - chr4_3:60153989-60154008 Msa0652450:intron 30.0%
AACTATATAAAGATTGCACC+GGG + chr4_3:60154010-60154029 None:intergenic 30.0%
TCACTCCATAAAAAGAATGA+AGG + chr4_3:60154354-60154373 None:intergenic 30.0%
TTATGAACCCAACTTATTGA+GGG - chr4_3:60154602-60154621 Msa0652450:CDS 30.0%
! CTTTTCAGAAATACATGACT+TGG - chr4_3:60154774-60154793 Msa0652450:intron 30.0%
TGTAAAATTCATCTCTTCTC+CGG + chr4_3:60154807-60154826 None:intergenic 30.0%
TGTGGTTACAAAATTGTTAC+TGG - chr4_3:60154983-60155002 Msa0652450:intron 30.0%
! AATATGATGATTTTACCGAG+AGG - chr4_3:60155044-60155063 Msa0652450:CDS 30.0%
AAAAAAAAGTCCATACCTCT+CGG + chr4_3:60155062-60155081 None:intergenic 30.0%
TAAAGAATTTACCTACTCGT+TGG - chr4_3:60155097-60155116 Msa0652450:intron 30.0%
AAATATACAAACCAACGAGT+AGG + chr4_3:60155111-60155130 None:intergenic 30.0%
AATTCAGACCATACTAATGA+AGG - chr4_3:60155229-60155248 Msa0652450:intron 30.0%
TTGAACAAAGTATGTTGTCA+AGG - chr4_3:60155319-60155338 Msa0652450:intron 30.0%
TGAACAAAGTATGTTGTCAA+GGG - chr4_3:60155320-60155339 Msa0652450:intron 30.0%
GATTTGAATCATGAATCAGA+AGG + chr4_3:60155494-60155513 None:intergenic 30.0%
TCATGATTCAAATCTCGATT+TGG - chr4_3:60155500-60155519 Msa0652450:intron 30.0%
! TATGGTCTGGTTTACATTTA+TGG - chr4_3:60155533-60155552 Msa0652450:intron 30.0%
TTTGTATCCATCTTTCCTTT+GGG - chr4_3:60155799-60155818 Msa0652450:intron 30.0%
TTAATTTCTTGATTGTAGCC+CGG + chr4_3:60155918-60155937 None:intergenic 30.0%
CAAGAAATTAACTCAAGGAA+TGG - chr4_3:60155927-60155946 Msa0652450:intron 30.0%
TGCTAAAACTGATGAAGAAA+AGG - chr4_3:60155975-60155994 Msa0652450:intron 30.0%
! AAATTGTGAGTCTTATCTTG+TGG - chr4_3:60156001-60156020 Msa0652450:intron 30.0%
AAAAAACAGAATGCTACAAC+TGG - chr4_3:60156107-60156126 Msa0652450:intron 30.0%
AAAAACAGAATGCTACAACT+GGG - chr4_3:60156108-60156127 Msa0652450:intron 30.0%
CATCGTCAAAATATTATTGC+AGG + chr4_3:60156141-60156160 None:intergenic 30.0%
AATGAGTTATTGCGTATATG+AGG - chr4_3:60156206-60156225 Msa0652450:CDS 30.0%
ATGAGTTATTGCGTATATGA+GGG - chr4_3:60156207-60156226 Msa0652450:CDS 30.0%
CTCTTATCTCCAATAAAAGA+AGG + chr4_3:60156319-60156338 None:intergenic 30.0%
ATAAGAGAATCAACCTTTCT+TGG - chr4_3:60156332-60156351 Msa0652450:intron 30.0%
! GATACAAAGTACTCTCAAAA+GGG + chr4_3:60156452-60156471 None:intergenic 30.0%
! TGATACAAAGTACTCTCAAA+AGG + chr4_3:60156453-60156472 None:intergenic 30.0%
CTTCTTCAATGCAATATTGT+TGG + chr4_3:60156630-60156649 None:intergenic 30.0%
CAACAATATTGCATTGAAGA+AGG - chr4_3:60156628-60156647 Msa0652450:CDS 30.0%
AAGAAGTCCTATTTGTATTC+CGG + chr4_3:60156891-60156910 None:intergenic 30.0%
!!! AGAGGAAGTTTTGATTATAG+AGG - chr4_3:60156936-60156955 Msa0652450:five_prime_UTR 30.0%
CATTCTACAGAAACAAACTT+CGG + chr4_3:60156994-60157013 None:intergenic 30.0%
TTACATGCATACATAACCAA+GGG + chr4_3:60157083-60157102 None:intergenic 30.0%
ATTACATGCATACATAACCA+AGG + chr4_3:60157084-60157103 None:intergenic 30.0%
! TGACAAGTGGATTTATATGA+AGG - chr4_3:60157108-60157127 Msa0652450:five_prime_UTR 30.0%
! CATTTCATAATGCTTTAAGC+GGG + chr4_3:60157158-60157177 None:intergenic 30.0%
ACCTGAAACAAAGTGAACAA+GGG + chr4_3:60149518-60149537 None:intergenic 35.0%
GGAAAGAACTTGAAGAACTT+AGG + chr4_3:60149922-60149941 None:intergenic 35.0%
AAGTTCTTTCCTGAACTTTC+CGG - chr4_3:60149931-60149950 Msa0652450:CDS 35.0%
!! TACTCATCTTGATTTGGTTG+AGG - chr4_3:60149966-60149985 Msa0652450:intron 35.0%
TTCAGTGTAATCACATGTGT+TGG - chr4_3:60150043-60150062 Msa0652450:intron 35.0%
TTCTATTACTGTACAGGTTC+GGG - chr4_3:60150120-60150139 Msa0652450:intron 35.0%
AAGGATACACCTGAGAATAT+TGG - chr4_3:60150175-60150194 Msa0652450:CDS 35.0%
ATTCTTGAGAGTTGAGAACA+TGG - chr4_3:60150263-60150282 Msa0652450:intron 35.0%
TCAAAATTTACCATACTGGC+TGG + chr4_3:60150499-60150518 None:intergenic 35.0%
CAGCTCAAAATTTACCATAC+TGG + chr4_3:60150503-60150522 None:intergenic 35.0%
TTAAGATCAAAGGCAAAGCT+CGG - chr4_3:60150612-60150631 Msa0652450:CDS 35.0%
AGAATAAGAAAGACGCCTTT+CGG + chr4_3:60150733-60150752 None:intergenic 35.0%
! GCTCTTTGGTTTCATGAATA+TGG + chr4_3:60150807-60150826 None:intergenic 35.0%
ATGAAACCAAAGAGCTGATA+TGG - chr4_3:60150812-60150831 Msa0652450:intron 35.0%
TGAACGATAATCTTAAGCAG+TGG + chr4_3:60150914-60150933 None:intergenic 35.0%
!!! CCACTAGTTTTACCACTATA+AGG + chr4_3:60150965-60150984 None:intergenic 35.0%
CCTTATAGTGGTAAAACTAG+TGG - chr4_3:60150962-60150981 Msa0652450:intron 35.0%
AGTCATAAATGTCCAGAATC+TGG + chr4_3:60151397-60151416 None:intergenic 35.0%
! ACTTTGTTTAAGCACATTCG+TGG - chr4_3:60151477-60151496 Msa0652450:intron 35.0%
CAGAGTTTAGAAGATGTAAC+TGG - chr4_3:60151824-60151843 Msa0652450:intron 35.0%
TTTGAGCCTATTTGGAGAAA+AGG - chr4_3:60151883-60151902 Msa0652450:intron 35.0%
CTGCGAGAAAAAAATTGAGT+TGG + chr4_3:60152327-60152346 None:intergenic 35.0%
!!! ACTCAATTTTTTTCTCGCAG+AGG - chr4_3:60152327-60152346 Msa0652450:intron 35.0%
!!! CTCAATTTTTTTCTCGCAGA+GGG - chr4_3:60152328-60152347 Msa0652450:intron 35.0%
!!! TCAATTTTTTTCTCGCAGAG+GGG - chr4_3:60152329-60152348 Msa0652450:intron 35.0%
CTAATTACCTGGTCAAAAAC+AGG + chr4_3:60152401-60152420 None:intergenic 35.0%
GACCAGGTAATTAGATTGTT+TGG - chr4_3:60152407-60152426 Msa0652450:intron 35.0%
ACTATTGCGGAATAGATTGA+CGG - chr4_3:60152642-60152661 Msa0652450:intron 35.0%
TAAACTAAAGAAACGTAGCC+GGG + chr4_3:60152764-60152783 None:intergenic 35.0%
CTGGTTAACTTCATAGATCT+TGG - chr4_3:60152839-60152858 Msa0652450:intron 35.0%
!! AAATCTACTTTTCGTTCTCC+AGG + chr4_3:60152962-60152981 None:intergenic 35.0%
TTCAGCAACTGAACAATAGA+AGG + chr4_3:60153046-60153065 None:intergenic 35.0%
TTCTATTGTTCAGTTGCTGA+AGG - chr4_3:60153045-60153064 Msa0652450:intron 35.0%
CATAGAGTATACAACTTCCT+AGG + chr4_3:60153222-60153241 None:intergenic 35.0%
TTACAAATAGATTCAACCCG+AGG - chr4_3:60153351-60153370 Msa0652450:intron 35.0%
TTGGAGCTTCTGAATTAAAG+TGG + chr4_3:60153450-60153469 None:intergenic 35.0%
TTTACTAAGTGTGTTTGGAG+TGG + chr4_3:60153544-60153563 None:intergenic 35.0%
AGGCAATATGTAATGCAACT+TGG - chr4_3:60153696-60153715 Msa0652450:intron 35.0%
!! CGTCTCCTAATTTGAGTTTT+TGG - chr4_3:60153747-60153766 Msa0652450:intron 35.0%
AGAAACAGAACATAGTTGCA+AGG + chr4_3:60153844-60153863 None:intergenic 35.0%
!!! CATTACTTTTTCTGTCAGTG+TGG + chr4_3:60154090-60154109 None:intergenic 35.0%
CTGACAGAAAAAGTAATGTC+CGG - chr4_3:60154092-60154111 Msa0652450:intron 35.0%
TAGCTAGATGACAATGTTCT+CGG + chr4_3:60154293-60154312 None:intergenic 35.0%
ACATTGTCATCTAGCTAAAG+TGG - chr4_3:60154296-60154315 Msa0652450:intron 35.0%
! GCTAAAGTGGTATTTTGTTG+TGG - chr4_3:60154309-60154328 Msa0652450:CDS 35.0%
!! GTATTTTGTTGTGGATAGCT+TGG - chr4_3:60154318-60154337 Msa0652450:CDS 35.0%
GTTATGAACCCAACTTATTG+AGG - chr4_3:60154601-60154620 Msa0652450:CDS 35.0%
AATGTTGCCCTCAATAAGTT+GGG + chr4_3:60154612-60154631 None:intergenic 35.0%
TAACTGTTAGTAATCACTGG+AGG - chr4_3:60154669-60154688 Msa0652450:CDS 35.0%
! TACATGACTTGGAAGAAAAC+CGG - chr4_3:60154785-60154804 Msa0652450:intron 35.0%
!! ATCGAACTTGGTTCTTTTGT+AGG - chr4_3:60154937-60154956 Msa0652450:intron 35.0%
! CATAAACTATTGGTGGCATT+AGG + chr4_3:60154965-60154984 None:intergenic 35.0%
AATGCCACCAATAGTTTATG+TGG - chr4_3:60154965-60154984 Msa0652450:intron 35.0%
GTAACCACATAAACTATTGG+TGG + chr4_3:60154972-60154991 None:intergenic 35.0%
ATAAAAAATGAGGGGCTGTT+GGG - chr4_3:60155169-60155188 Msa0652450:intron 35.0%
! ATTCCAAGACCTTTGAGTTT+AGG - chr4_3:60155264-60155283 Msa0652450:intron 35.0%
! TTCCAAGACCTTTGAGTTTA+GGG - chr4_3:60155265-60155284 Msa0652450:intron 35.0%
ACATACTTTGTTCAACTTGC+TGG + chr4_3:60155314-60155333 None:intergenic 35.0%
GAACAAAGTATGTTGTCAAG+GGG - chr4_3:60155321-60155340 Msa0652450:intron 35.0%
!! AATCTCGATTTGGTAACCTT+TGG - chr4_3:60155510-60155529 Msa0652450:intron 35.0%
GTTTGTATCCATCTTTCCTT+TGG - chr4_3:60155798-60155817 Msa0652450:intron 35.0%
TAATTTCTTGATTGTAGCCC+GGG + chr4_3:60155917-60155936 None:intergenic 35.0%
GGCTGAAAACAACAAATCTA+TGG - chr4_3:60155948-60155967 Msa0652450:intron 35.0%
!!! GCAAAAGCACCTTCTTTTAT+TGG - chr4_3:60156307-60156326 Msa0652450:intron 35.0%
AATATTGTTGGATCCATTGC+CGG + chr4_3:60156618-60156637 None:intergenic 35.0%
TAATTTCTTGGAGACTGTAC+CGG - chr4_3:60156869-60156888 Msa0652450:CDS 35.0%
GTACTAAAATTCTTTGGCAG+AGG - chr4_3:60156918-60156937 Msa0652450:five_prime_UTR 35.0%
! TCTTATCCTTTTGATGCAAG+CGG - chr4_3:60157031-60157050 Msa0652450:five_prime_UTR 35.0%
TACATGCATACATAACCAAG+GGG + chr4_3:60157082-60157101 None:intergenic 35.0%
GCATGTAATGTAATGACAAG+TGG - chr4_3:60157095-60157114 Msa0652450:five_prime_UTR 35.0%
! ACCCTTGTTCACTTTGTTTC+AGG - chr4_3:60149514-60149533 Msa0652450:three_prime_UTR 40.0%
GACCTGAAACAAAGTGAACA+AGG + chr4_3:60149519-60149538 None:intergenic 40.0%
TCCTCTATCGCATGCTTATT+TGG - chr4_3:60149601-60149620 Msa0652450:three_prime_UTR 40.0%
ACCAAATAAGCATGCGATAG+AGG + chr4_3:60149605-60149624 None:intergenic 40.0%
ATCGAGAAGCTCTACCAATA+TGG - chr4_3:60149701-60149720 Msa0652450:three_prime_UTR 40.0%
CTCTTCCAAAGACAAATCTC+AGG - chr4_3:60149736-60149755 Msa0652450:CDS 40.0%
! TCAATTTTCGCAGAACGTCA+AGG - chr4_3:60149828-60149847 Msa0652450:CDS 40.0%
CAGAACGTCAAGGATTATCA+AGG - chr4_3:60149838-60149857 Msa0652450:CDS 40.0%
!! ATGAGTATTGAGTGCAAGAC+CGG + chr4_3:60149953-60149972 None:intergenic 40.0%
TCTTGTGCAACTTCTTTCCT+CGG - chr4_3:60150213-60150232 Msa0652450:CDS 40.0%
AATAAACCACAACTTACCCG+AGG + chr4_3:60150233-60150252 None:intergenic 40.0%
GATTTCATTACCAGCCAGTA+TGG - chr4_3:60150486-60150505 Msa0652450:intron 40.0%
AAATGTTTGAGGAGGTCTTC+CGG + chr4_3:60150660-60150679 None:intergenic 40.0%
AATAAGAAAGACGCCTTTCG+GGG + chr4_3:60150731-60150750 None:intergenic 40.0%
GAATAAGAAAGACGCCTTTC+GGG + chr4_3:60150732-60150751 None:intergenic 40.0%
TACAACTTTGCCCCTTATAG+TGG - chr4_3:60150950-60150969 Msa0652450:intron 40.0%
CTGCAAGAGATCATCTATAC+TGG + chr4_3:60151202-60151221 None:intergenic 40.0%
!! TCTCTTGCAGCTTGTTAATG+TGG - chr4_3:60151212-60151231 Msa0652450:intron 40.0%
AAGGTGAGAAACCATGTGAT+TGG - chr4_3:60151564-60151583 Msa0652450:CDS 40.0%
CAAATAGGCTCAAACTCTTC+AGG + chr4_3:60151877-60151896 None:intergenic 40.0%
CTGAAGAGTTTGAGCCTATT+TGG - chr4_3:60151875-60151894 Msa0652450:intron 40.0%
GTTGATATCATGCCTTCACA+TGG - chr4_3:60152224-60152243 Msa0652450:intron 40.0%
TGTCGATAGAGACACTATTG+CGG - chr4_3:60152629-60152648 Msa0652450:intron 40.0%
CTATTGCGGAATAGATTGAC+GGG - chr4_3:60152643-60152662 Msa0652450:intron 40.0%
! TTCAACAGTCTTGGTAGTTG+CGG - chr4_3:60152700-60152719 Msa0652450:intron 40.0%
!! TTCATAGATCTTGGATTGGC+TGG - chr4_3:60152848-60152867 Msa0652450:intron 40.0%
TGAAAGGTGAAAACTCTGCA+AGG + chr4_3:60152994-60153013 None:intergenic 40.0%
!! GAATCTTGTGGTGTTGTGAA+AGG + chr4_3:60153010-60153029 None:intergenic 40.0%
AGCATTTGTCGTGAATCTTG+TGG + chr4_3:60153022-60153041 None:intergenic 40.0%
AAGAATATGGCATGATTGGC+AGG - chr4_3:60153081-60153100 Msa0652450:intron 40.0%
! TTTTTCATGAAAACCCGGGT+TGG - chr4_3:60153673-60153692 Msa0652450:intron 40.0%
ATTACATATTGCCTCCAACC+CGG + chr4_3:60153690-60153709 None:intergenic 40.0%
ACTCAAATTAGGAGACGTCA+AGG + chr4_3:60153744-60153763 None:intergenic 40.0%
CAACAACTTGTGAACTCACA+TGG + chr4_3:60153787-60153806 None:intergenic 40.0%
AGAAGCAGAATGTTGTGCTA+TGG + chr4_3:60153813-60153832 None:intergenic 40.0%
CAGATAGAAGGTCCACTTAA+GGG + chr4_3:60153910-60153929 None:intergenic 40.0%
! TATTCTGATGCTGATTGGGT+AGG + chr4_3:60153941-60153960 None:intergenic 40.0%
ATAAAGATTGCACCGGGTAA+AGG + chr4_3:60154004-60154023 None:intergenic 40.0%
TTAATTACCTCACAGTGACC+AGG + chr4_3:60154118-60154137 None:intergenic 40.0%
TCAAGCTACTACTAGGTCAA+GGG + chr4_3:60154187-60154206 None:intergenic 40.0%
TTGACCTAGTGATACTCCTA+TGG + chr4_3:60154219-60154238 None:intergenic 40.0%
TGCAGCGTTATATTGTTGAG+TGG - chr4_3:60154456-60154475 Msa0652450:intron 40.0%
CAATGTTGCCCTCAATAAGT+TGG + chr4_3:60154613-60154632 None:intergenic 40.0%
ATTTCATCACCTAGCTCACA+AGG - chr4_3:60154850-60154869 Msa0652450:CDS 40.0%
AAAGGTTTACCTTGTGAGCT+AGG + chr4_3:60154862-60154881 None:intergenic 40.0%
ATGCAGCACATAATCGAACT+TGG - chr4_3:60154925-60154944 Msa0652450:intron 40.0%
! GATGATTTTACCGAGAGGTA+TGG - chr4_3:60155049-60155068 Msa0652450:CDS 40.0%
! GTAGTACGCACATGTCATTT+AGG - chr4_3:60155146-60155165 Msa0652450:intron 40.0%
GATAAAAAATGAGGGGCTGT+TGG - chr4_3:60155168-60155187 Msa0652450:intron 40.0%
GAAGCCTTTGTGAAGGTTTA+CGG - chr4_3:60155199-60155218 Msa0652450:intron 40.0%
ACAACCGTAAACCTTCACAA+AGG + chr4_3:60155206-60155225 None:intergenic 40.0%
ACTCAAAGGTCTTGGAATCT+TGG + chr4_3:60155262-60155281 None:intergenic 40.0%
TACCCTAAACTCAAAGGTCT+TGG + chr4_3:60155270-60155289 None:intergenic 40.0%
AAAGTATGTTGTCAAGGGGT+AGG - chr4_3:60155325-60155344 Msa0652450:intron 40.0%
TTAAGATTTGCGCATAGCAG+TGG - chr4_3:60155358-60155377 Msa0652450:intron 40.0%
TAAGATTTGCGCATAGCAGT+GGG - chr4_3:60155359-60155378 Msa0652450:intron 40.0%
!! CGATTTGGTAACCTTTGGTA+TGG - chr4_3:60155515-60155534 Msa0652450:intron 40.0%
TGTAAACCAGACCATACCAA+AGG + chr4_3:60155529-60155548 None:intergenic 40.0%
!!! AATGCCGACACTTGTTTTTG+AGG - chr4_3:60155633-60155652 Msa0652450:intron 40.0%
!!! ATGCCGACACTTGTTTTTGA+GGG - chr4_3:60155634-60155653 Msa0652450:intron 40.0%
TCTCGTAGGTTACAGTAGTT+TGG - chr4_3:60155698-60155717 Msa0652450:intron 40.0%
CTCGTAGGTTACAGTAGTTT+GGG - chr4_3:60155699-60155718 Msa0652450:intron 40.0%
TAGGTTACAGTAGTTTGGGA+TGG - chr4_3:60155703-60155722 Msa0652450:intron 40.0%
GATGGTGAAAGCTCTTGATT+TGG - chr4_3:60155721-60155740 Msa0652450:intron 40.0%
AGGAAAGATGGATACAAACG+AGG + chr4_3:60155797-60155816 None:intergenic 40.0%
AGCAAATCCCAAAGGAAAGA+TGG + chr4_3:60155809-60155828 None:intergenic 40.0%
!! ATCTTTCCTTTGGGATTTGC+TGG - chr4_3:60155808-60155827 Msa0652450:intron 40.0%
AATTGACCAGCAAATCCCAA+AGG + chr4_3:60155817-60155836 None:intergenic 40.0%
!! TTGGGATTTGCTGGTCAATT+TGG - chr4_3:60155817-60155836 Msa0652450:intron 40.0%
!! TGGGATTTGCTGGTCAATTT+GGG - chr4_3:60155818-60155837 Msa0652450:intron 40.0%
CTCCAGATTGAAAAACGTTG+AGG - chr4_3:60155885-60155904 Msa0652450:intron 40.0%
!! CTCCTCAACGTTTTTCAATC+TGG + chr4_3:60155890-60155909 None:intergenic 40.0%
TGGTTGCTTCTTTCCAAGAA+AGG + chr4_3:60156348-60156367 None:intergenic 40.0%
TTTACTTCTGCAGAGCGAAA+CGG - chr4_3:60156582-60156601 Msa0652450:intron 40.0%
! CAACTTGTCAATAGAGCACT+AGG - chr4_3:60156677-60156696 Msa0652450:CDS 40.0%
GACTGTACCGGAATACAAAT+AGG - chr4_3:60156881-60156900 Msa0652450:CDS 40.0%
! CTTATCCTTTTGATGCAAGC+GGG - chr4_3:60157032-60157051 Msa0652450:five_prime_UTR 40.0%
CATTGGAAGCTTCTTCGTTC+TGG + chr4_3:60149651-60149670 None:intergenic 45.0%
TCGGAAGGTTCAGTAGTCAT+TGG + chr4_3:60149668-60149687 None:intergenic 45.0%
ATGTAAGCAGCTTCTTCGGA+AGG + chr4_3:60149683-60149702 None:intergenic 45.0%
CTCGATGTAAGCAGCTTCTT+CGG + chr4_3:60149687-60149706 None:intergenic 45.0%
! AGTTGAGTTGCTCGCCATAT+TGG + chr4_3:60149718-60149737 None:intergenic 45.0%
TTGGTTGAGGCTGATGAACT+CGG - chr4_3:60149979-60149998 Msa0652450:intron 45.0%
GGTGTATCCTTGCAGAAAAG+AGG + chr4_3:60150166-60150185 None:intergenic 45.0%
CTTGTGCAACTTCTTTCCTC+GGG - chr4_3:60150214-60150233 Msa0652450:CDS 45.0%
TTCTTTCCTCGGGTAAGTTG+TGG - chr4_3:60150224-60150243 Msa0652450:CDS 45.0%
CAAAGCTCGGTTGTTGCATA+GGG - chr4_3:60150625-60150644 Msa0652450:CDS 45.0%
AACCAAAGAGCTGATATGGC+TGG - chr4_3:60150816-60150835 Msa0652450:intron 45.0%
TGTTAATGTGGTGACTGCCA+AGG - chr4_3:60151224-60151243 Msa0652450:intron 45.0%
ACTACCACTTAAAGGCTCCT+TGG + chr4_3:60151244-60151263 None:intergenic 45.0%
GGATGACCTTAGTCGTGAAA+AGG - chr4_3:60151521-60151540 Msa0652450:CDS 45.0%
TGTCGTTCCATTTCCTCTTG+GGG + chr4_3:60151682-60151701 None:intergenic 45.0%
! GTGTCGTTCCATTTCCTCTT+GGG + chr4_3:60151683-60151702 None:intergenic 45.0%
! TGTGTCGTTCCATTTCCTCT+TGG + chr4_3:60151684-60151703 None:intergenic 45.0%
! CTGGAGCCTTTTCTCCAAAT+AGG + chr4_3:60151892-60151911 None:intergenic 45.0%
GAGCTGCTTGGAATCATTGA+AGG - chr4_3:60151926-60151945 Msa0652450:intron 45.0%
!! CAATTGGAAGTGCCATGTGA+AGG + chr4_3:60152239-60152258 None:intergenic 45.0%
CATGGCACTTCCAATTGTTG+TGG - chr4_3:60152242-60152261 Msa0652450:intron 45.0%
TAAAGAAACGTAGCCGGGAA+AGG + chr4_3:60152759-60152778 None:intergenic 45.0%
!! CTTGGATTGGCTGGTAAATG+TGG - chr4_3:60152857-60152876 Msa0652450:intron 45.0%
!! TAAGGGACTTGGTGTCTGTT+TGG - chr4_3:60153379-60153398 Msa0652450:intron 45.0%
!! GACTTGGTGTCTGTTTGGAT+GGG - chr4_3:60153384-60153403 Msa0652450:intron 45.0%
TTACATATTGCCTCCAACCC+GGG + chr4_3:60153689-60153708 None:intergenic 45.0%
!! TAAGGGTGTTGTGTCCTCAT+TGG + chr4_3:60153893-60153912 None:intergenic 45.0%
GCAGATAGAAGGTCCACTTA+AGG + chr4_3:60153911-60153930 None:intergenic 45.0%
TAAGTGGACCTTCTATCTGC+TGG - chr4_3:60153911-60153930 Msa0652450:intron 45.0%
TAGGTTCACCAGCAGATAGA+AGG + chr4_3:60153922-60153941 None:intergenic 45.0%
! GGGCTATTCTGATGCTGATT+GGG + chr4_3:60153945-60153964 None:intergenic 45.0%
ATCAGAATAGCCCGCAACTT+GGG - chr4_3:60153952-60153971 Msa0652450:intron 45.0%
AAAGGTAACACCCAAGTTGC+GGG + chr4_3:60153965-60153984 None:intergenic 45.0%
CAAAGGTAACACCCAAGTTG+CGG + chr4_3:60153966-60153985 None:intergenic 45.0%
GTGTTCCAATGCTCATCACA+TGG - chr4_3:60154044-60154063 Msa0652450:intron 45.0%
ATGCTCCATGTGATGAGCAT+TGG + chr4_3:60154052-60154071 None:intergenic 45.0%
AGAAAAAGTAATGTCCGGCC+TGG - chr4_3:60154097-60154116 Msa0652450:intron 45.0%
GGTCAATATCGACGTCTAGT+TGG + chr4_3:60154146-60154165 None:intergenic 45.0%
ACTAGACGTCGATATTGACC+AGG - chr4_3:60154146-60154165 Msa0652450:intron 45.0%
CTAGACGTCGATATTGACCA+GGG - chr4_3:60154147-60154166 Msa0652450:intron 45.0%
TATTGACCAGGGTCGTTCAA+TGG - chr4_3:60154158-60154177 Msa0652450:CDS 45.0%
CAAGCTACTACTAGGTCAAG+GGG + chr4_3:60154186-60154205 None:intergenic 45.0%
GTCAAGCTACTACTAGGTCA+AGG + chr4_3:60154188-60154207 None:intergenic 45.0%
ACCTAGTAGTAGCTTGACGT+TGG - chr4_3:60154190-60154209 Msa0652450:CDS 45.0%
CCTAGTAGTAGCTTGACGTT+GGG - chr4_3:60154191-60154210 Msa0652450:CDS 45.0%
!! GGATCCATAGGAGTATCACT+AGG - chr4_3:60154212-60154231 Msa0652450:intron 45.0%
ATAACGCTGCAATGATGAGC+AGG + chr4_3:60154447-60154466 None:intergenic 45.0%
TCTTCTCCAAGCCTATCAGA+TGG + chr4_3:60155013-60155032 None:intergenic 45.0%
TCATGCAGAAGCCTTTGTGA+AGG - chr4_3:60155192-60155211 Msa0652450:intron 45.0%
CAAAGGTCTTGGAATCTTGG+CGG + chr4_3:60155259-60155278 None:intergenic 45.0%
TGGTAACCTTTGGTATGGTC+TGG - chr4_3:60155520-60155539 Msa0652450:intron 45.0%
GGACCCTCAAAAACAAGTGT+CGG + chr4_3:60155640-60155659 None:intergenic 45.0%
ACTACTGTAACCTACGAGAC+AGG + chr4_3:60155697-60155716 None:intergenic 45.0%
AAAACGTTGAGGAGTTCACC+CGG - chr4_3:60155896-60155915 Msa0652450:intron 45.0%
! TGCGGTAGTTGATGCAGATT+TGG + chr4_3:60156368-60156387 None:intergenic 45.0%
ACAATACCCAACAGCATGTG+CGG + chr4_3:60156386-60156405 None:intergenic 45.0%
ATTGCATTGAAGAAGGGTCG+AGG - chr4_3:60156635-60156654 Msa0652450:CDS 45.0%
! CTTGTCAATAGAGCACTAGG+TGG - chr4_3:60156680-60156699 Msa0652450:CDS 45.0%
!! AGAGCACTAGGTGGATTATC+TGG - chr4_3:60156689-60156708 Msa0652450:CDS 45.0%
TGATTCCCGCTTGCATCAAA+AGG + chr4_3:60157040-60157059 None:intergenic 45.0%
ACTGAACATCTTATGCCCCT+TGG - chr4_3:60157064-60157083 Msa0652450:five_prime_UTR 45.0%
!!! TGTATTTTTTTTTTTTTTTT+TGG - chr4_3:60150092-60150111 Msa0652450:intron 5.0%
!!! TTTAATCTTTTATTTTATTA+TGG - chr4_3:60156044-60156063 Msa0652450:intron 5.0%
!!! TTAATCTTTTATTTTATTAT+GGG - chr4_3:60156045-60156064 Msa0652450:intron 5.0%
AGTGCAAGACCGGAAAGTTC+AGG + chr4_3:60149943-60149962 None:intergenic 50.0%
TGGTTGAGGCTGATGAACTC+GGG - chr4_3:60149980-60149999 Msa0652450:intron 50.0%
! AGGACTGCCTCTTTTCTGCA+AGG - chr4_3:60150156-60150175 Msa0652450:intron 50.0%
GCAAAGCTCGGTTGTTGCAT+AGG - chr4_3:60150624-60150643 Msa0652450:CDS 50.0%
TGCCAGCCATATCAGCTCTT+TGG + chr4_3:60150821-60150840 None:intergenic 50.0%
ACTGCCAAGGAGCCTTTAAG+TGG - chr4_3:60151237-60151256 Msa0652450:intron 50.0%
TGAACTGTTGAAGCCCCAAG+AGG - chr4_3:60151666-60151685 Msa0652450:intron 50.0%
GTTGAAGCCCCAAGAGGAAA+TGG - chr4_3:60151672-60151691 Msa0652450:intron 50.0%
CTAGGCGTCTTCAACAGTCT+TGG - chr4_3:60152691-60152710 Msa0652450:intron 50.0%
ATAGCCGGAAAGACCTTTCC+CGG - chr4_3:60152743-60152762 Msa0652450:intron 50.0%
TGTTATTCCTGCCAGCTTCC+TGG - chr4_3:60152941-60152960 Msa0652450:intron 50.0%
! CTTTTCGTTCTCCAGGAAGC+TGG + chr4_3:60152955-60152974 None:intergenic 50.0%
TCTAACACTCCTCCTCAAGC+TGG - chr4_3:60153300-60153319 Msa0652450:intron 50.0%
ATGTATGCTCCAGCTTGAGG+AGG + chr4_3:60153312-60153331 None:intergenic 50.0%
GACATGTATGCTCCAGCTTG+AGG + chr4_3:60153315-60153334 None:intergenic 50.0%
ATTCAACCCGAGGTCCTCTA+AGG - chr4_3:60153361-60153380 Msa0652450:intron 50.0%
TTCAACCCGAGGTCCTCTAA+GGG - chr4_3:60153362-60153381 Msa0652450:intron 50.0%
ACAGACACCAAGTCCCTTAG+AGG + chr4_3:60153378-60153397 None:intergenic 50.0%
!! GGACTTGGTGTCTGTTTGGA+TGG - chr4_3:60153383-60153402 Msa0652450:intron 50.0%
! TTGGTGTCTGTTTGGATGGG+CGG - chr4_3:60153387-60153406 Msa0652450:intron 50.0%
! TTCATGAAAACCCGGGTTGG+AGG - chr4_3:60153676-60153695 Msa0652450:intron 50.0%
GAGGACACAACACCCTTAAG+TGG - chr4_3:60153895-60153914 Msa0652450:intron 50.0%
CGGGCTATTCTGATGCTGAT+TGG + chr4_3:60153946-60153965 None:intergenic 50.0%
CATCAGAATAGCCCGCAACT+TGG - chr4_3:60153951-60153970 Msa0652450:intron 50.0%
CCCAACGTCAAGCTACTACT+AGG + chr4_3:60154194-60154213 None:intergenic 50.0%
AGCTTGACGTTGGGATCCAT+AGG - chr4_3:60154200-60154219 Msa0652450:CDS 50.0%
GCTGCAATGATGAGCAGGAA+TGG + chr4_3:60154442-60154461 None:intergenic 50.0%
TTACTGGCCAGCCATCTGAT+AGG - chr4_3:60154999-60155018 Msa0652450:intron 50.0%
GCGGTGGTCCTTCATTAGTA+TGG + chr4_3:60155240-60155259 None:intergenic 50.0%
TGTCAAGGGGTAGGACAACA+AGG - chr4_3:60155334-60155353 Msa0652450:intron 50.0%
CAGTGGGTAGTACCAAGTGT+TGG - chr4_3:60155375-60155394 Msa0652450:intron 50.0%
TGCTGCTATTGGCCAACACT+TGG + chr4_3:60155390-60155409 None:intergenic 50.0%
! TGCCATAGTGCTGCTGCTAT+TGG + chr4_3:60155401-60155420 None:intergenic 50.0%
TTGCTTGTCACCTGTCTCGT+AGG - chr4_3:60155684-60155703 Msa0652450:intron 50.0%
AAACGTTGAGGAGTTCACCC+GGG - chr4_3:60155897-60155916 Msa0652450:intron 50.0%
!!! GAAGGTGCTTTTGCGTGCAA+TGG + chr4_3:60156301-60156320 None:intergenic 50.0%
TCAACTACCGCACATGCTGT+TGG - chr4_3:60156376-60156395 Msa0652450:intron 50.0%
CAACTACCGCACATGCTGTT+GGG - chr4_3:60156377-60156396 Msa0652450:intron 50.0%
TTGAAGAAGGGTCGAGGTTC+TGG - chr4_3:60156641-60156660 Msa0652450:CDS 50.0%
!! GCACTAGGTGGATTATCTGG+TGG - chr4_3:60156692-60156711 Msa0652450:CDS 50.0%
!! CTAGGTGGATTATCTGGTGG+AGG - chr4_3:60156695-60156714 Msa0652450:CDS 50.0%
GGATTATCTGGTGGAGGAAG+AGG - chr4_3:60156701-60156720 Msa0652450:CDS 50.0%
AGAGGAAGTGGAAGAGGTAG+AGG - chr4_3:60156800-60156819 Msa0652450:intron 50.0%
AGTGGAAGAGGTAGAGGTAG+AGG - chr4_3:60156806-60156825 Msa0652450:intron 50.0%
GTGGAAGAGGTAGAGGTAGA+GGG - chr4_3:60156807-60156826 Msa0652450:intron 50.0%
! GAGGTAGAGGTAGAGGGTAT+TGG - chr4_3:60156813-60156832 Msa0652450:CDS 50.0%
GGTTGAGGCTGATGAACTCG+GGG - chr4_3:60149981-60150000 Msa0652450:intron 55.0%
GTTCGGGTGCAAGCGATAAG+AGG - chr4_3:60150136-60150155 Msa0652450:intron 55.0%
GGAGCGTGATGCTGTGCATA+AGG - chr4_3:60150335-60150354 Msa0652450:intron 55.0%
! AGGCTCTGATGTCTCTGCTG+AGG - chr4_3:60150355-60150374 Msa0652450:intron 55.0%
TCTGATGTCTCTGCTGAGGC+AGG - chr4_3:60150359-60150378 Msa0652450:intron 55.0%
CTGCTGAGGCAGGATGTGAA+AGG - chr4_3:60150369-60150388 Msa0652450:intron 55.0%
TTGCATAGGGATGCCACAGC+CGG - chr4_3:60150638-60150657 Msa0652450:CDS 55.0%
AGAAAGACGCCTTTCGGGGT+GGG + chr4_3:60150727-60150746 None:intergenic 55.0%
AAGAAAGACGCCTTTCGGGG+TGG + chr4_3:60150728-60150747 None:intergenic 55.0%
AAAGGCTCCAGCTGAGCGTA+TGG - chr4_3:60151901-60151920 Msa0652450:intron 55.0%
AGCTCTTCCATACGCTCAGC+TGG + chr4_3:60151911-60151930 None:intergenic 55.0%
GAGCGTATGGAAGAGCTGCT+TGG - chr4_3:60151914-60151933 Msa0652450:intron 55.0%
! ATAGATTGACGGGCACCCAC+TGG - chr4_3:60152653-60152672 Msa0652450:intron 55.0%
! TAGATTGACGGGCACCCACT+GGG - chr4_3:60152654-60152673 Msa0652450:intron 55.0%
! CAGGCATAAGGTGTCCCAGT+GGG + chr4_3:60152671-60152690 None:intergenic 55.0%
TGGGACACCTTATGCCTGCT+AGG - chr4_3:60152673-60152692 Msa0652450:intron 55.0%
GAAGACGCCTAGCAGGCATA+AGG + chr4_3:60152683-60152702 None:intergenic 55.0%
GACTGTTGAAGACGCCTAGC+AGG + chr4_3:60152690-60152709 None:intergenic 55.0%
GTAGCCGGGAAAGGTCTTTC+CGG + chr4_3:60152750-60152769 None:intergenic 55.0%
CAAGTCCCTTAGAGGACCTC+GGG + chr4_3:60153370-60153389 None:intergenic 55.0%
CCAAGTCCCTTAGAGGACCT+CGG + chr4_3:60153371-60153390 None:intergenic 55.0%
! GGGTGTTGTGTCCTCATTGG+AGG + chr4_3:60153890-60153909 None:intergenic 55.0%
TTACCTCACAGTGACCAGGC+CGG + chr4_3:60154114-60154133 None:intergenic 55.0%
CTCCAAGCCTATCAGATGGC+TGG + chr4_3:60155009-60155028 None:intergenic 55.0%
AGGTCTTGGAATCTTGGCGG+TGG + chr4_3:60155256-60155275 None:intergenic 55.0%
GGCCAATAGCAGCAGCACTA+TGG - chr4_3:60155396-60155415 Msa0652450:intron 55.0%
! GTGCTTTTGCGTGCAATGGC+TGG + chr4_3:60156297-60156316 None:intergenic 55.0%
GATCCATTGCCGGTAGTAGC+AGG + chr4_3:60156608-60156627 None:intergenic 55.0%
! AAGAAGGGTCGAGGTTCTGG+TGG - chr4_3:60156644-60156663 Msa0652450:CDS 55.0%
AGAGTCTCTGGTGGAGGTAG+AGG - chr4_3:60156725-60156744 Msa0652450:intron 55.0%
TGGAGGTAGAGGTGGAGCAA+GGG - chr4_3:60156736-60156755 Msa0652450:intron 55.0%
TTGAGGAGGTCTTCCGGCTG+TGG + chr4_3:60150654-60150673 None:intergenic 60.0%
AAAGACGCCTTTCGGGGTGG+GGG + chr4_3:60150725-60150744 None:intergenic 60.0%
GAAAGACGCCTTTCGGGGTG+GGG + chr4_3:60150726-60150745 None:intergenic 60.0%
! GCAGGCATAAGGTGTCCCAG+TGG + chr4_3:60152672-60152691 None:intergenic 60.0%
! CAGTCTTGGTAGTTGCGGCC+TGG - chr4_3:60152705-60152724 Msa0652450:intron 60.0%
TCGTTCTCCAGGAAGCTGGC+AGG + chr4_3:60152951-60152970 None:intergenic 60.0%
! CCGAGGTCCTCTAAGGGACT+TGG - chr4_3:60153368-60153387 Msa0652450:intron 60.0%
GGCCAGCCATCTGATAGGCT+TGG - chr4_3:60155004-60155023 Msa0652450:CDS 60.0%
GCGAAACGGCCTGCTACTAC+CGG - chr4_3:60156596-60156615 Msa0652450:CDS 60.0%
GGAGGAAGAGGCAGAGTCTC+TGG - chr4_3:60156713-60156732 Msa0652450:intron 60.0%
GGAAGAGGCAGAGTCTCTGG+TGG - chr4_3:60156716-60156735 Msa0652450:intron 60.0%
AGAGGCAGAGTCTCTGGTGG+AGG - chr4_3:60156719-60156738 Msa0652450:intron 60.0%
GTCTCTGGTGGAGGTAGAGG+TGG - chr4_3:60156728-60156747 Msa0652450:intron 60.0%
GTGGAGGTAGAGGTGGAGCA+AGG - chr4_3:60156735-60156754 Msa0652450:intron 60.0%
GGAGGTAGAGGTGGAGCAAG+GGG - chr4_3:60156737-60156756 Msa0652450:intron 60.0%
CGCGGAAGAGGAAGTGGAAG+AGG - chr4_3:60156794-60156813 Msa0652450:intron 60.0%
!! GTGGGGGGGCTTTGGCTTTG+GGG + chr4_3:60150709-60150728 None:intergenic 65.0%
!! GGTGGGGGGGCTTTGGCTTT+GGG + chr4_3:60150710-60150729 None:intergenic 65.0%
AAGACGCCTTTCGGGGTGGG+GGG + chr4_3:60150724-60150743 None:intergenic 65.0%
TGTCCGGCCTGGTCACTGTG+AGG - chr4_3:60154108-60154127 Msa0652450:intron 65.0%
GGGGAGCCATTGAACGACCC+TGG + chr4_3:60154167-60154186 None:intergenic 65.0%
CGGCCTGCTACTACCGGCAA+TGG - chr4_3:60156602-60156621 Msa0652450:CDS 65.0%
GTAGAGGTGGAGCAAGGGGC+CGG - chr4_3:60156741-60156760 Msa0652450:intron 65.0%
TAGAGGTGGAGCAAGGGGCC+GGG - chr4_3:60156742-60156761 Msa0652450:intron 65.0%
GGTGGTCGCGGAAGAGGAAG+TGG - chr4_3:60156788-60156807 Msa0652450:intron 65.0%
! GGGTGGGGGGGCTTTGGCTT+TGG + chr4_3:60150711-60150730 None:intergenic 70.0%
CTTTCGGGGTGGGGGGGCTT+TGG + chr4_3:60150717-60150736 None:intergenic 70.0%
CAAAGCCCCCCCACCCCGAA+AGG - chr4_3:60150715-60150734 Msa0652450:intron 70.0%
AGACGCCTTTCGGGGTGGGG+GGG + chr4_3:60150723-60150742 None:intergenic 70.0%
AGAGGTGGAGCAAGGGGCCG+GGG - chr4_3:60156743-60156762 Msa0652450:intron 70.0%
TTCCGCGACCACCCCAGCCT+TGG + chr4_3:60156781-60156800 None:intergenic 70.0%
CCAGGGCCAGGGCCAAGGCT+GGG - chr4_3:60156766-60156785 Msa0652450:intron 75.0%
CAGGGCCAGGGCCAAGGCTG+GGG - chr4_3:60156767-60156786 Msa0652450:intron 75.0%
GACCACCCCAGCCTTGGCCC+TGG + chr4_3:60156775-60156794 None:intergenic 75.0%
GGCCAAGGCTGGGGTGGTCG+CGG - chr4_3:60156776-60156795 Msa0652450:intron 75.0%
GGCTGGGGTGGTCGCGGAAG+AGG - chr4_3:60156782-60156801 Msa0652450:intron 75.0%
! TGGAGCAAGGGGCCGGGGCC+AGG - chr4_3:60156748-60156767 Msa0652450:intron 80.0%
! GGAGCAAGGGGCCGGGGCCA+GGG - chr4_3:60156749-60156768 Msa0652450:intron 80.0%
! CTTGGCCCTGGCCCTGGCCC+CGG + chr4_3:60156763-60156782 None:intergenic 80.0%
! GCCAGGGCCAGGGCCAAGGC+TGG - chr4_3:60156765-60156784 Msa0652450:intron 80.0%
! CCCAGCCTTGGCCCTGGCCC+TGG + chr4_3:60156769-60156788 None:intergenic 80.0%
! GGCCAGGGCCAAGGCTGGGG+TGG - chr4_3:60156770-60156789 Msa0652450:intron 80.0%
! AAGGGGCCGGGGCCAGGGCC+AGG - chr4_3:60156754-60156773 Msa0652450:intron 85.0%
! AGGGGCCGGGGCCAGGGCCA+GGG - chr4_3:60156755-60156774 Msa0652450:intron 85.0%
! CGGGGCCAGGGCCAGGGCCA+AGG - chr4_3:60156761-60156780 Msa0652450:intron 85.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 60149384 60157186 60149384 ID=Msa0652450;Name=Msa0652450
chr4_3 mRNA 60149384 60157186 60149384 ID=Msa0652450-mRNA-1;Parent=Msa0652450;Name=Msa0652450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=284|0.93|0.87|1|1|1|16|348|551
chr4_3 exon 60149384 60149975 60149384 ID=Msa0652450-mRNA-1:exon:16317;Parent=Msa0652450-mRNA-1
chr4_3 exon 60150172 60150272 60150172 ID=Msa0652450-mRNA-1:exon:16316;Parent=Msa0652450-mRNA-1
chr4_3 exon 60150404 60150469 60150404 ID=Msa0652450-mRNA-1:exon:16315;Parent=Msa0652450-mRNA-1
chr4_3 exon 60150565 60150679 60150565 ID=Msa0652450-mRNA-1:exon:16314;Parent=Msa0652450-mRNA-1
chr4_3 exon 60151505 60151611 60151505 ID=Msa0652450-mRNA-1:exon:16313;Parent=Msa0652450-mRNA-1
chr4_3 exon 60151699 60151788 60151699 ID=Msa0652450-mRNA-1:exon:16312;Parent=Msa0652450-mRNA-1
chr4_3 exon 60153504 60153614 60153504 ID=Msa0652450-mRNA-1:exon:16311;Parent=Msa0652450-mRNA-1
chr4_3 exon 60154158 60154223 60154158 ID=Msa0652450-mRNA-1:exon:16310;Parent=Msa0652450-mRNA-1
chr4_3 exon 60154307 60154381 60154307 ID=Msa0652450-mRNA-1:exon:16309;Parent=Msa0652450-mRNA-1
chr4_3 exon 60154594 60154743 60154594 ID=Msa0652450-mRNA-1:exon:16308;Parent=Msa0652450-mRNA-1
chr4_3 exon 60154847 60154921 60154847 ID=Msa0652450-mRNA-1:exon:16307;Parent=Msa0652450-mRNA-1
chr4_3 exon 60155004 60155104 60155004 ID=Msa0652450-mRNA-1:exon:16306;Parent=Msa0652450-mRNA-1
chr4_3 exon 60156180 60156245 60156180 ID=Msa0652450-mRNA-1:exon:16305;Parent=Msa0652450-mRNA-1
chr4_3 exon 60156335 60156392 60156335 ID=Msa0652450-mRNA-1:exon:16304;Parent=Msa0652450-mRNA-1
chr4_3 exon 60156589 60156729 60156589 ID=Msa0652450-mRNA-1:exon:16303;Parent=Msa0652450-mRNA-1
chr4_3 exon 60156813 60157186 60156813 ID=Msa0652450-mRNA-1:exon:16302;Parent=Msa0652450-mRNA-1
chr4_3 five_prime_UTR 60156903 60157186 60156903 ID=Msa0652450-mRNA-1:five_prime_utr;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60156813 60156902 60156813 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60156589 60156729 60156589 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60156335 60156392 60156335 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60156180 60156245 60156180 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60155004 60155104 60155004 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60154847 60154921 60154847 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60154594 60154743 60154594 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60154307 60154381 60154307 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60154158 60154223 60154158 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60153504 60153614 60153504 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60151699 60151788 60151699 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60151505 60151611 60151505 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60150565 60150679 60150565 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60150404 60150469 60150404 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60150172 60150272 60150172 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 CDS 60149732 60149975 60149732 ID=Msa0652450-mRNA-1:cds;Parent=Msa0652450-mRNA-1
chr4_3 three_prime_UTR 60149384 60149731 60149384 ID=Msa0652450-mRNA-1:three_prime_utr;Parent=Msa0652450-mRNA-1
Gene Sequence

>Msa0652450

ATGACTACTGAACCTTCCGAAGAAGCTGCTTACATCGAGAAGCTCTACCAATATGGCGAGCAACTCAACTCTTCCAAAGACAAATCTCAGAACGTCAAGGATTATCAAGGAATCATAGATACAGCTAACACTAGTGTTAAAGCTAAACAACTCGCTGCACAGCTTATTCCTAAGTTCTTCAAGTTCTTTCCTGAACTTTCCGGTCTTGCACTCAATACTCATCTTGATTTGGATACACCTGAGAATATTGGAAAAATGGTTGATATTCTTGTGCAACTTCTTTCCTCGGATGAATTTGTGGAGCGTGATGCTGTGCATAAGGCTCTGATGTCTCTGCTGAGGCAGGATGTGAAAGCTTCGTTGACGACTTTGTTTAAGCACATTCGTGGTAATGTTGAAGAGCAAAATTCGGATGACCTTAGTCGTGAAAAGGTTATAAATTTTGTTAGAGATAAGGTCTTCCCTATTAAAGCTGAACTGTTGAAGCCCCAAGAGGAAATGGAACGACACATAACCGATCTAATAAAAAATAGTTTAGAAGATGTAACTGGTATAGAATTTCGAATGTTTATGGATTTCCTGAAGAGTTTGAGCCTATTTGGAGAAAAGGCTCCAGCTGAGCGTATGGAAGAGCTGCTTGGAATCATTGAAGGACAAGCTGATTTAGATCTACCGTTCAATGTTGCTGATGCAAATCAAACAGATCATATTCATAGGTTGATATCATGCCTTCACATGGCACTTCCAATTGTTGTGAGGGGTGCATCTAGCAGCAAATTTATTAACTTCATAAACGACTATATTATACCTGTTTTTGACCAGCTTCCTGGAGAACGAAAAGTAGATTTGCTCAGAAACCTTGCAGAGTTTTCACCTTTCACAACACCACAAGATTCACGACAAATGCTTCCTTCTATTGTTCAGTTGCTGAAGAAATACATGACTTGGAAGAAAACCGGAGAAGAGATGAATTTTACATATGTTGAGTGCTTGTTGTACACATTTCATCACCTAGCTCACAAGGTTCCTAATGCCACCAATAGTTTATGTGGTTACAAAATTGTTACTGGCCAGCCATCTGATAGGCTTGGAGAAGACTTCTCAGAGCAATATGATGATTTTACCGAGAGATTGAAAAACGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCAAGGAATGGCTGAAAACAACAAATCTATGGCAGATGCTAAAACTGATGAAGAAAAGGAAAAAATTAAAACTAAAAAACAGAATGCTACAACTGGGTTGCGTACCTGCAATAATATTTTGACGATGACAAAGCCATTGCACGCAAAAGCACCTTCTTTTATTGGAGATAAGAGAATCAACCTTTCTTGGAAAGAAGCAACCAAATCTGCATCAACTACCGCACATGCTGTTGGAGCGAAACGGCCTGCTACTACCGGCAATGGATCCAACAATATTGCATTGAAGAAGGGTCGAGGTTCTGGTGGTATGCAAAATCAACTTGTCAATAGAGCACTAGGTGGATTATCTGGTGGAGGAAGAGGCAGAGTCTCTGGTGGAGGTAGAGGTGGAGCAAGGGGCCGGGGCCAGGGCCAGGGCCAAGGCTGGGGTGGTCGCGGAAGAGGAAGTGGAAGAGGTAGAGGTAGAGGGTATTGGTGA

Protein sequence

>Msa0652450

MTTEPSEEAAYIEKLYQYGEQLNSSKDKSQNVKDYQGIIDTANTSVKAKQLAAQLIPKFFKFFPELSGLALNTHLDLDTPENIGKMVDILVQLLSSDEFVERDAVHKALMSLLRQDVKASLTTLFKHIRGNVEEQNSDDLSREKVINFVRDKVFPIKAELLKPQEEMERHITDLIKNSLEDVTGIEFRMFMDFLKSLSLFGEKAPAERMEELLGIIEGQADLDLPFNVADANQTDHIHRLISCLHMALPIVVRGASSSKFINFINDYIIPVFDQLPGERKVDLLRNLAEFSPFTTPQDSRQMLPSIVQLLKKYMTWKKTGEEMNFTYVECLLYTFHHLAHKVPNATNSLCGYKIVTGQPSDRLGEDFSEQYDDFTERLKNVEEFTRATIKKLTQGMAENNKSMADAKTDEEKEKIKTKKQNATTGLRTCNNILTMTKPLHAKAPSFIGDKRINLSWKEATKSASTTAHAVGAKRPATTGNGSNNIALKKGRGSGGMQNQLVNRALGGLSGGGRGRVSGGGRGGARGRGQGQGQGWGGRGRGSGRGRGRGYW*