AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0143560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143560 MtrunA17_Chr7g0225161 89.958 717 40 3 718 1413 194 899 0.0 1269
Msa0143560 MtrunA17_Chr7g0225161 88.996 727 50 4 53 758 182 899 0.0 1269
Msa0143560 MtrunA17_Chr7g0225161 99.029 103 1 0 1 103 1 103 2.33e-56 212
Msa0143560 MtrunA17_Chr4g0061371 85.311 708 73 2 718 1404 194 891 0.0 1214
Msa0143560 MtrunA17_Chr4g0061371 84.262 718 84 3 53 749 182 891 0.0 1212
Msa0143560 MtrunA17_Chr4g0061371 70.874 103 30 0 1 103 1 103 1.41e-38 156
Msa0143560 MtrunA17_Chr7g0218421 49.704 676 302 5 718 1366 275 939 0.0 677
Msa0143560 MtrunA17_Chr7g0218421 51.181 635 282 4 104 711 306 939 0.0 668
Msa0143560 MtrunA17_Chr6g0454071 49.632 679 298 6 718 1366 271 935 0.0 675
Msa0143560 MtrunA17_Chr6g0454071 51.491 637 277 4 104 711 302 935 0.0 667
Msa0143560 MtrunA17_Chr3g0137071 48.763 687 307 7 718 1372 283 956 0.0 654
Msa0143560 MtrunA17_Chr3g0137071 50.464 646 285 6 104 717 314 956 0.0 644
Msa0143560 MtrunA17_Chr2g0329561 67.925 477 143 3 913 1388 4 471 0.0 636
Msa0143560 MtrunA17_Chr2g0329561 67.505 477 145 3 258 733 4 471 0.0 632
Msa0143560 MtrunA17_Chr8g0385811 42.772 671 284 10 745 1374 298 909 2.50e-165 520
Msa0143560 MtrunA17_Chr8g0385811 43.411 645 275 9 106 719 324 909 2.76e-163 515
Msa0143560 MtrunA17_Chr3g0131711 42.051 673 286 8 745 1374 294 905 1.25e-163 516
Msa0143560 MtrunA17_Chr3g0131711 43.876 645 272 10 106 719 320 905 5.70e-161 509
Msa0143560 MtrunA17_Chr3g0134631 42.623 671 285 10 745 1374 299 910 3.88e-163 514
Msa0143560 MtrunA17_Chr3g0134631 43.101 645 277 9 106 719 325 910 9.81e-161 508
Msa0143560 MtrunA17_Chr2g0277781 71.717 297 78 2 1056 1351 2 293 3.93e-140 430
Msa0143560 MtrunA17_Chr2g0277781 71.380 297 79 2 401 696 2 293 6.69e-140 430
Msa0143560 MtrunA17_Chr3g0131351 38.705 695 315 13 718 1374 330 951 3.12e-139 452
Msa0143560 MtrunA17_Chr3g0131351 40.276 653 289 13 105 719 362 951 6.45e-139 451
Msa0143560 MtrunA17_Chr3g0102771 40.625 448 253 8 286 725 345 787 1.86e-99 338
Msa0143560 MtrunA17_Chr3g0102771 40.402 448 254 8 941 1380 345 787 3.74e-98 335
Msa0143560 MtrunA17_Chr3g0102771 35.821 201 105 4 739 917 240 438 9.95e-27 118
Msa0143560 MtrunA17_Chr3g0102771 33.784 222 125 5 53 262 227 438 1.89e-25 114
Msa0143560 MtrunA17_Chr2g0277771 77.326 172 34 1 1233 1404 1 167 7.37e-82 266
Msa0143560 MtrunA17_Chr2g0277771 76.744 172 35 1 578 749 1 167 2.25e-81 265
Msa0143560 MtrunA17_Chr7g0260941 65.476 168 13 2 578 745 1 123 7.25e-59 198
Msa0143560 MtrunA17_Chr7g0260941 64.881 168 14 2 1233 1400 1 123 1.68e-58 197
Msa0143560 MtrunA17_Chr7g0260931 85.263 95 14 0 1043 1137 1 95 2.46e-47 164
Msa0143560 MtrunA17_Chr7g0260931 84.211 95 15 0 388 482 1 95 1.78e-46 161
Msa0143560 MtrunA17_Chr3g0135231 35.345 348 136 8 746 1070 290 571 1.39e-46 179
Msa0143560 MtrunA17_Chr3g0135231 36.478 318 145 7 106 394 305 594 5.00e-45 174
Msa0143560 MtrunA17_Chr3g0135231 43.750 96 54 0 535 630 546 641 3.67e-15 80.9
Msa0143560 MtrunA17_Chr3g0135231 43.750 96 54 0 1190 1285 546 641 4.39e-15 80.5
Msa0143560 MtrunA17_Chr1g0188061 61.628 86 33 0 1144 1229 232 317 5.59e-29 120
Msa0143560 MtrunA17_Chr1g0188061 61.628 86 33 0 489 574 232 317 6.20e-29 120
Msa0143560 MtrunA17_Chr2g0277791 66.216 74 21 1 319 392 1 70 4.35e-21 88.6
Msa0143560 MtrunA17_Chr2g0277791 65.753 73 21 1 974 1046 1 69 4.48e-21 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143560 AT1G74310.1 77.793 707 120 5 718 1403 194 884 0.0 1109
Msa0143560 AT1G74310.1 76.709 717 132 6 53 748 182 884 0.0 1107
Msa0143560 AT1G74310.1 64.078 103 37 0 1 103 1 103 3.44e-34 143
Msa0143560 AT1G74310.2 78.199 633 104 3 718 1329 194 813 0.0 1001
Msa0143560 AT1G74310.2 77.138 643 115 4 53 674 182 813 0.0 1000
Msa0143560 AT1G74310.2 64.078 103 37 0 1 103 1 103 3.10e-34 142
Msa0143560 AT5G15450.1 49.333 675 305 5 718 1366 269 932 0.0 674
Msa0143560 AT5G15450.1 51.104 634 283 4 104 711 300 932 0.0 667
Msa0143560 AT2G25140.1 48.567 698 313 6 718 1382 274 958 0.0 667
Msa0143560 AT2G25140.1 50.533 657 289 5 104 727 305 958 0.0 660
Msa0143560 AT4G14670.1 66.247 477 125 4 717 1171 158 620 0.0 609
Msa0143560 AT4G14670.1 70.115 435 104 3 104 516 190 620 0.0 600
Msa0143560 AT5G50920.1 42.710 679 285 13 745 1382 296 911 5.66e-163 514
Msa0143560 AT5G50920.1 43.185 653 277 12 106 727 322 911 2.94e-161 510
Msa0143560 AT3G48870.2 42.326 645 282 8 106 719 312 897 1.14e-158 503
Msa0143560 AT3G48870.2 41.474 692 297 12 718 1374 279 897 2.37e-156 497
Msa0143560 AT3G48870.1 42.326 645 282 8 106 719 343 928 1.15e-157 501
Msa0143560 AT3G48870.1 41.474 692 297 11 718 1374 310 928 2.48e-155 495
Msa0143560 AT3G48870.4 42.326 645 282 8 106 719 343 928 1.15e-157 501
Msa0143560 AT3G48870.4 41.474 692 297 11 718 1374 310 928 2.48e-155 495
Msa0143560 AT3G48870.3 42.326 645 282 8 106 719 343 928 1.15e-157 501
Msa0143560 AT3G48870.3 41.474 692 297 11 718 1374 310 928 2.48e-155 495
Msa0143560 AT5G51070.1 42.429 601 292 10 109 693 339 901 2.20e-135 441
Msa0143560 AT5G51070.1 39.021 674 331 13 708 1348 275 901 6.02e-133 434
Msa0143560 AT4G14675.1 52.027 148 39 1 1233 1380 1 116 4.75e-44 157
Msa0143560 AT4G14675.1 51.351 148 40 1 578 725 1 116 1.53e-43 156
Msa0143560 AT3G45450.1 37.143 140 69 3 746 884 188 309 7.64e-19 90.1
Msa0143560 AT3G45450.1 41.346 104 52 1 126 229 215 309 1.42e-16 83.6

Find 309 sgRNAs with CRISPR-Local

Find 893 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATCTTTCTTTATCATTT+TGG 0.106978 1_4:-2520518 None:intergenic
CCAACCTTTCTTTATCATTT+TGG 0.125585 1_4:-2509431 None:intergenic
TTGATAATGGAAGAGCTTTC+TGG 0.214612 1_4:-2507394 None:intergenic
TAGATTATTTGCTTTGGATA+TGG 0.216197 1_4:+2518931 Msa0143560:CDS
CATCTCATAAGTGGACTTTC+AGG 0.227432 1_4:+2510269 Msa0143560:CDS
CATCTCATAAGTGGACTTTC+AGG 0.227432 1_4:+2521339 Msa0143560:CDS
AGCTATCTATGATGCTTATA+AGG 0.230297 1_4:+2521778 Msa0143560:CDS
AAGTTCATTCTCATCAATTT+TGG 0.246451 1_4:+2522364 Msa0143560:CDS
TAAGTTATTTGCTTTGGATA+TGG 0.257561 1_4:+2507852 Msa0143560:CDS
TTGTTAAGGGCGTCGTCTTC+CGG 0.277396 1_4:+2519729 Msa0143560:intron
TCCAGCCTATTCAACAATTC+TGG 0.282474 1_4:-2510353 None:intergenic
TCCAGCCTATTCAACAATTC+TGG 0.282474 1_4:-2521423 None:intergenic
TTCCTTGGTCCAACCGGTTT+CGG 0.287826 1_4:+2509582 Msa0143560:CDS
TTCTCAAGCCACCTTCTAAT+TGG 0.289169 1_4:-2510671 None:intergenic
TTCTCAAGCCACCTTCTAAT+TGG 0.289169 1_4:-2521741 None:intergenic
GTTGCATTCTCTTCCTTTCA+AGG 0.293230 1_4:-2508745 None:intergenic
GATGAAATTCATCTTGTTCT+CGG 0.335841 1_4:+2507979 Msa0143560:CDS
GATGAAATTCATCTTGTTCT+CGG 0.335841 1_4:+2519058 Msa0143560:CDS
ACTAAATCAATTGCCTTATC+AGG 0.337759 1_4:-2508662 None:intergenic
AGTCGCTGGTACTGAGTATA+GGG 0.341170 1_4:+2507882 Msa0143560:CDS
AGTCGCTGGTACTCAGTATA+GGG 0.347042 1_4:+2518961 Msa0143560:CDS
AAGTTATTTGCTTTGGATAT+GGG 0.366810 1_4:+2507853 Msa0143560:CDS
AGATTATTTGCTTTGGATAT+GGG 0.372226 1_4:+2518932 Msa0143560:CDS
TCTTTCAATGACTTTGATAA+TGG 0.377205 1_4:-2507407 None:intergenic
TTTATCGTTGTGCAGGTGTA+TGG 0.379532 1_4:+2521711 Msa0143560:intron
TTCCTATTCCTTGGTCCAAC+CGG 0.381964 1_4:+2509576 Msa0143560:CDS
TTCCTATTCCTTGGTCCAAC+CGG 0.381964 1_4:+2520663 Msa0143560:CDS
ATATCGTAGGTCTGCAGCTC+TGG 0.383932 1_4:-2509253 None:intergenic
ATATCGTAGGTCTGCAGCTC+TGG 0.383932 1_4:-2520340 None:intergenic
GGAAGTGGAACTTCATGCTT+TGG 0.387740 1_4:+2519855 Msa0143560:CDS
ATTCATCTTGTTCTCGGTGC+TGG 0.396509 1_4:+2519064 Msa0143560:CDS
ACTGGTTCCTTCCTATTCCT+TGG 0.398409 1_4:+2509567 Msa0143560:CDS
ACTGGTTCCTTCCTATTCCT+TGG 0.398409 1_4:+2520654 Msa0143560:CDS
AGGGCGTCGTCTTCCGGATA+AGG 0.399124 1_4:+2519735 Msa0143560:intron
TCAGGCCAGAATTGTTGAAT+AGG 0.402278 1_4:+2510348 Msa0143560:CDS
TCAGGCCAGAATTGTTGAAT+AGG 0.402278 1_4:+2521418 Msa0143560:CDS
CTAACGTCAGCAAGATTACT+AGG 0.402971 1_4:-2518911 None:intergenic
CGAAGAATACTAATGGTATC+AGG 0.403438 1_4:-2519256 None:intergenic
CACCGACATTGGAAATTGCT+TGG 0.405651 1_4:-2507285 None:intergenic
TCAAGGTTGTCAATTTCCTC+TGG 0.405921 1_4:-2508728 None:intergenic
TTCTCGGTATCAAGATTGAT+TGG 0.410667 1_4:+2520783 Msa0143560:CDS
AGGCTTTCTCCTTACAGCTT+CGG 0.411007 1_4:-2510087 None:intergenic
TAATCCACGAAGAATACTAA+TGG 0.414662 1_4:-2519263 None:intergenic
TGACGTTAGATTATTTGCTT+TGG 0.416483 1_4:+2518925 Msa0143560:CDS
TGATGTTAAGTTATTTGCTT+TGG 0.417628 1_4:+2507846 Msa0143560:CDS
TAGTCGCTGGTACTCAGTAT+AGG 0.418958 1_4:+2518960 Msa0143560:CDS
CAACAACACTTGATGAATAT+AGG 0.419042 1_4:+2508085 Msa0143560:CDS
CAACAACACTTGATGAATAT+AGG 0.419042 1_4:+2519164 Msa0143560:CDS
TCAAGGTTGTCAATTTCCTC+AGG 0.419934 1_4:-2519814 None:intergenic
TGAAAGGAAAAGAATGCAAC+TGG 0.420171 1_4:+2519834 Msa0143560:CDS
CGGAGAATACTAATGGTATC+AGG 0.420528 1_4:-2508177 None:intergenic
TAGTCGCTGGTACTGAGTAT+AGG 0.425529 1_4:+2507881 Msa0143560:CDS
ATTCATCTTGTTCTCGGTGC+CGG 0.428777 1_4:+2507985 Msa0143560:CDS
TAAAATCAACAGTTCTTCCT+TGG 0.433442 1_4:-2510205 None:intergenic
CCAAAATGATAAAGAAAGAT+TGG 0.433655 1_4:+2520518 Msa0143560:CDS
TTTATCGTTGTGTAGGTGTA+TGG 0.436237 1_4:+2510641 Msa0143560:intron
ACTAAATCAATTGCCTTATC+CGG 0.437732 1_4:-2519748 None:intergenic
GATACCATTAGTATTCTTCG+TGG 0.438229 1_4:+2519259 Msa0143560:CDS
GGAAGTAGAACTCCATGCTT+TGG 0.442970 1_4:+2508769 Msa0143560:CDS
TAGTCCACGGAGAATACTAA+TGG 0.443420 1_4:-2508184 None:intergenic
GCTATCTATGATGCTTATAA+GGG 0.445749 1_4:+2521779 Msa0143560:CDS
TAAAATCCACAGTTCTTCCT+TGG 0.449120 1_4:-2521275 None:intergenic
CAGCGACAGCTTTAACTGCT+TGG 0.449855 1_4:-2509497 None:intergenic
CAGCGACAGCTTTAACTGCT+TGG 0.449855 1_4:-2520584 None:intergenic
ACTTTAATTTCTGATCTCAA+TGG 0.452305 1_4:+2507253 Msa0143560:CDS
GAAAAGAATGCAACTGGAAG+TGG 0.455400 1_4:+2519840 Msa0143560:CDS
TGCTCGCGACCGAGTAATGC+TGG 0.456834 1_4:+2510310 Msa0143560:CDS
TGCTCGCGACCGAGTAATGC+TGG 0.456834 1_4:+2521380 Msa0143560:CDS
TGAAAGGAAGAGAATGCAAC+TGG 0.457893 1_4:+2508748 Msa0143560:CDS
TATACCAAATCACTTCCCTT+TGG 0.459313 1_4:-2510773 None:intergenic
TATACCAAATCACTTCCCTT+TGG 0.459313 1_4:-2521843 None:intergenic
CTTTGATAATGAAAATCAAA+TGG 0.460019 1_4:+2520728 Msa0143560:CDS
TGACGAAGGTGGACAATTAA+CGG 0.460785 1_4:+2521137 Msa0143560:CDS
ACTTGACATGTCGGAATACA+TGG 0.463181 1_4:+2509668 Msa0143560:CDS
ACTTGACATGTCGGAATACA+TGG 0.463181 1_4:+2520755 Msa0143560:CDS
TTATCGTTGTGCAGGTGTAT+GGG 0.466125 1_4:+2521712 Msa0143560:intron
ACAACCTCAGCTATTTGATC+TGG 0.466362 1_4:-2509372 None:intergenic
ACAACCTCAGCTATTTGATC+TGG 0.466362 1_4:-2520459 None:intergenic
GCTGTCTATGATGCTTATAA+AGG 0.467051 1_4:+2510709 Msa0143560:CDS
ATTTGAAAGGAGGTTTCAAC+AGG 0.467761 1_4:+2508131 Msa0143560:CDS
ATTTGAAAGGAGGTTTCAAC+AGG 0.467761 1_4:+2519210 Msa0143560:CDS
ATCAATTGCTCGTGAGATAG+AGG 0.468800 1_4:-2510395 None:intergenic
ATCAATTGCTCGTGAGATAG+AGG 0.468800 1_4:-2521465 None:intergenic
TGGTCCAAAGGGAAGTGATT+TGG 0.469216 1_4:+2510769 Msa0143560:CDS
TGGTCCAAAGGGAAGTGATT+TGG 0.469216 1_4:+2521839 Msa0143560:CDS
AGAGCTCCTCTTTGCACTAC+AGG 0.471282 1_4:+2509206 Msa0143560:CDS
AGAGCTCCTCTTTGCACTAC+AGG 0.471282 1_4:+2520293 Msa0143560:CDS
GCCAGAATTGTTGAATAGGC+TGG 0.473395 1_4:+2510352 Msa0143560:CDS
GCCAGAATTGTTGAATAGGC+TGG 0.473395 1_4:+2521422 Msa0143560:CDS
AGAGCTGCAGACCTACGATA+TGG 0.473492 1_4:+2509255 Msa0143560:CDS
AGAGCTGCAGACCTACGATA+TGG 0.473492 1_4:+2520342 Msa0143560:CDS
AATCTTGAAGGTAGCACTGA+TGG 0.474434 1_4:+2509309 Msa0143560:CDS
AATCTTGAAGGTAGCACTGA+TGG 0.474434 1_4:+2520396 Msa0143560:CDS
GGGATTGTTGATGCTGAAAC+TGG 0.476859 1_4:+2510815 Msa0143560:CDS
GGGATTGTTGATGCTGAAAC+TGG 0.476859 1_4:+2521885 Msa0143560:CDS
AACCGGTTGGACCAAGGAAT+AGG 0.477819 1_4:-2509578 None:intergenic
CACCGGTTGGACCAAGGAAT+AGG 0.477910 1_4:-2520665 None:intergenic
GACAATTGACCGAAGCTGTA+AGG 0.481182 1_4:+2510078 Msa0143560:CDS
ATAGGGGACAATTTGAAGAA+AGG 0.481222 1_4:+2507899 Msa0143560:CDS
TAGGCCAAAATGATAAAGAA+AGG 0.482063 1_4:+2509427 Msa0143560:CDS
AGGGCGTCGTCTTCCTGATA+AGG 0.483337 1_4:+2508649 Msa0143560:intron
ACTTCATGCTTTGGAGAAAG+AGG 0.483359 1_4:+2519864 Msa0143560:CDS
AATGATAAAGAAAGGTTGGT+TGG 0.485880 1_4:+2509435 Msa0143560:CDS
AATGATAAAGAAAGATTGGT+TGG 0.485880 1_4:+2520522 Msa0143560:CDS
AGAAAACTAGCAATAAGTTC+AGG 0.485939 1_4:+2507196 Msa0143560:CDS
CTGGCTAAGAGAATAGTTAG+AGG 0.487036 1_4:+2518881 Msa0143560:intron
AAAGAAAGGTTGGTTGGACT+TGG 0.488358 1_4:+2509441 Msa0143560:CDS
TTAACATCAGCAAGATTACT+AGG 0.488518 1_4:-2507832 None:intergenic
CACAGTTCTTCCTTGGCCAT+CGG 0.490236 1_4:-2521268 None:intergenic
TCTGGTACATGCTGTGGTGG+AGG 0.490797 1_4:-2507376 None:intergenic
ATAGGGGACAATTTGAAGAA+AGG 0.491092 1_4:+2518978 Msa0143560:CDS
CCTCCTCTTTCTCCAAAGCA+TGG 0.492338 1_4:-2508781 None:intergenic
CAAGCAGTTAAAGCTGTCGC+TGG 0.493333 1_4:+2520585 Msa0143560:CDS
ACTGTAAGGCCTTCTCCTTA+CGG 0.493558 1_4:-2521163 None:intergenic
CTCGGTGCTGGTCGATGTCA+AGG 0.493860 1_4:+2519076 Msa0143560:CDS
CTCGGTGCCGGTCGATGTCA+AGG 0.494184 1_4:+2507997 Msa0143560:CDS
TGGATTAAAAGAGAAATATG+AGG 0.495006 1_4:+2519279 Msa0143560:CDS
GTGAGATCGAGAGCTGGTCT+AGG 0.495303 1_4:+2509528 Msa0143560:CDS
GTGAGATCGAGAGCTGGTCT+AGG 0.495303 1_4:+2520615 Msa0143560:CDS
AGTATAGCAAAGAGAAAGAG+AGG 0.498177 1_4:+2509148 Msa0143560:CDS
AGTATAGCAAAGAGAAAGAG+AGG 0.498177 1_4:+2520235 Msa0143560:CDS
ATATAGGCAATATGTTGAAA+AGG 0.498900 1_4:+2508101 Msa0143560:CDS
ATATAGGCAATATGTTGAAA+AGG 0.498900 1_4:+2519180 Msa0143560:CDS
TTGCTATACTTCATCTTCAG+AGG 0.500208 1_4:-2509135 None:intergenic
TTGCTATACTTCATCTTCAG+AGG 0.500208 1_4:-2520222 None:intergenic
AGGAAATTGACAACCTTGAA+AGG 0.501535 1_4:+2519818 Msa0143560:CDS
AGATTGATTGGTGCACCACC+AGG 0.503361 1_4:+2520795 Msa0143560:CDS
TGGACTAAAAGAGAAATATG+AGG 0.504636 1_4:+2508200 Msa0143560:CDS
AGGAAATTGACAACCTTGAA+AGG 0.506457 1_4:+2508732 Msa0143560:CDS
GACAATTAACGGAAGCCGTA+AGG 0.509021 1_4:+2521148 Msa0143560:CDS
AGATTGATCGGTGCACCACC+AGG 0.509852 1_4:+2509708 Msa0143560:CDS
TTCCAAGCAATTTCCAATGT+CGG 0.510415 1_4:+2507283 Msa0143560:CDS
CCAAAATGATAAAGAAAGGT+TGG 0.513032 1_4:+2509431 Msa0143560:CDS
ATGCTCGGCACCGAGGTTTG+AGG 0.516806 1_4:-2510249 None:intergenic
TAAAGTGGATGCAAGGTGTA+CGG 0.516884 1_4:-2507236 None:intergenic
CTAATGGTATCAGGCACACT+AGG 0.517122 1_4:-2508168 None:intergenic
CTAATGGTATCAGGCACACT+AGG 0.517122 1_4:-2519247 None:intergenic
AAGCAGTTAAAGCTGTCGCT+GGG 0.520029 1_4:+2520586 Msa0143560:CDS
AAGGAACCAGTTGGTTGTTG+TGG 0.521039 1_4:-2509555 None:intergenic
AAGGAACCAGTTGGTTGTTG+TGG 0.521039 1_4:-2520642 None:intergenic
GGAAGACCACAACAACCAAC+TGG 0.521898 1_4:+2509549 Msa0143560:CDS
GGAAGACCACAACAACCAAC+TGG 0.521898 1_4:+2520636 Msa0143560:CDS
TGCTTCAAGTCTTAGATGAC+GGG 0.522426 1_4:+2521238 Msa0143560:CDS
TAAACGAGTCACTGGTATAC+CGG 0.522890 1_4:-2509406 None:intergenic
TAAACGAGTCACTGGTATAC+CGG 0.522890 1_4:-2520493 None:intergenic
GAGAAATATGAGGGTCATCA+TGG 0.522895 1_4:+2508210 Msa0143560:CDS
GAGAAATATGAGGGTCATCA+TGG 0.522895 1_4:+2519289 Msa0143560:CDS
TTCCTTGGTCCAACCGGTGT+CGG 0.525904 1_4:+2520669 Msa0143560:CDS
AAAGAAAGATTGGTTGGACT+TGG 0.526948 1_4:+2520528 Msa0143560:CDS
ACAATTTGAAGAAAGGTTGA+AGG 0.528800 1_4:+2507906 Msa0143560:CDS
ACAATTTGAAGAAAGGTTGA+AGG 0.528800 1_4:+2518985 Msa0143560:CDS
GGTATACCAGTGACTCGTTT+AGG 0.529289 1_4:+2509408 Msa0143560:CDS
GGTATACCAGTGACTCGTTT+AGG 0.529289 1_4:+2520495 Msa0143560:CDS
AAAGTGGATGCAAGGTGTAC+GGG 0.529432 1_4:-2507235 None:intergenic
CGGTAAAACAGAACTTGCTA+AGG 0.529591 1_4:+2509602 Msa0143560:CDS
TTGATGCTGACGGAAATTGT+TGG 0.531346 1_4:+2520435 Msa0143560:CDS
ATTGAGATCAGAAATTAAAG+TGG 0.531542 1_4:-2507251 None:intergenic
CATTGATCCTTGACATCGAC+CGG 0.533522 1_4:-2508004 None:intergenic
CGGTCGATGTCAAGGATCAA+TGG 0.534003 1_4:+2508005 Msa0143560:CDS
TGTCGGTGAAAATGGATATG+AGG 0.535364 1_4:+2510883 Msa0143560:CDS
ACTCCATGCTTTGGAGAAAG+AGG 0.536190 1_4:+2508778 Msa0143560:CDS
ATCTCACGAGCAATTGATGA+AGG 0.536962 1_4:+2510400 Msa0143560:CDS
ATCTCACGAGCAATTGATGA+AGG 0.536962 1_4:+2521470 Msa0143560:CDS
GATATGGGAGCGTTAGTCGC+TGG 0.541820 1_4:+2507868 Msa0143560:CDS
GATATGGGAGCGTTAGTCGC+TGG 0.541820 1_4:+2518947 Msa0143560:CDS
GCAAGTATATAATCTAGTGC+TGG 0.545509 1_4:-2510494 None:intergenic
GCAAGTATATAATCTAGTGC+TGG 0.545509 1_4:-2521564 None:intergenic
AGATTGCATAGTAGAGTTGT+GGG 0.545910 1_4:+2509468 Msa0143560:CDS
TGCATTGATGCTGGTCCAAA+GGG 0.546349 1_4:+2510758 Msa0143560:CDS
TGCATTGATGCTGGTCCAAA+GGG 0.546349 1_4:+2521828 Msa0143560:CDS
CTTTGATAATGAAAATCAGA+TGG 0.549900 1_4:+2509641 Msa0143560:CDS
CAGATTGCATAGTAGAGTTG+TGG 0.550710 1_4:+2509467 Msa0143560:CDS
AAAAGGATGCTGCATTTGAA+AGG 0.550728 1_4:+2508118 Msa0143560:CDS
AAAAGGATGCTGCATTTGAA+AGG 0.550728 1_4:+2519197 Msa0143560:CDS
AGTGGAAGATGCTGAAGGGA+AGG 0.551183 1_4:+2507942 Msa0143560:CDS
AGTGGAAGATGCTGAAGGGA+AGG 0.551183 1_4:+2519021 Msa0143560:CDS
GTATACCGTGTGGAAAAGAA+TGG 0.554197 1_4:+2510791 Msa0143560:CDS
GTATACCGTGTGGAAAAGAA+TGG 0.554197 1_4:+2521861 Msa0143560:CDS
GGTGCCGAGCATCTCATAAG+TGG 0.555456 1_4:+2510260 Msa0143560:CDS
AGATTGCACAGTAGAGTTGT+GGG 0.556888 1_4:+2520555 Msa0143560:CDS
TGACGAATCTGCACGTTCCG+TGG 0.559545 1_4:+2507309 Msa0143560:CDS
CGGTAAAACAGAACTTGCTA+AGG 0.560192 1_4:+2520689 Msa0143560:CDS
AGGATGCTGCATTTGAAAGG+AGG 0.560849 1_4:+2508121 Msa0143560:CDS
AGGATGCTGCATTTGAAAGG+AGG 0.560849 1_4:+2519200 Msa0143560:CDS
ATGGGGCTAGACCAATTAGA+AGG 0.560996 1_4:+2521730 Msa0143560:CDS
TAACGGAAGCCGTAAGGAGA+AGG 0.562264 1_4:+2521154 Msa0143560:CDS
CAGATTGCACAGTAGAGTTG+TGG 0.563129 1_4:+2520554 Msa0143560:CDS
CTGCTTCAAGTCTTAGATGA+CGG 0.564051 1_4:+2521237 Msa0143560:CDS
TGCTGAGAGAGGAATTGCAT+TGG 0.564643 1_4:+2510460 Msa0143560:CDS
TACTCGGTATCAAGATTGAT+CGG 0.564793 1_4:+2509696 Msa0143560:CDS
AAGAAGTGGAAGATGCTGAA+GGG 0.565725 1_4:+2507938 Msa0143560:CDS
AAGAAGTGGAAGATGCTGAA+GGG 0.565725 1_4:+2519017 Msa0143560:CDS
CTGCTTCAAGTCTTAGACGA+TGG 0.568439 1_4:+2510167 Msa0143560:CDS
CAAGCAATTTCCAATGTCGG+TGG 0.569212 1_4:+2507286 Msa0143560:CDS
TATCGTTGTGCAGGTGTATG+GGG 0.570842 1_4:+2521713 Msa0143560:intron
CAAAGTCATTGAAAGAGCAC+AGG 0.574398 1_4:+2507414 Msa0143560:CDS
GGCAATTGATTTAGTTGACG+AGG 0.575315 1_4:+2508670 Msa0143560:CDS
GGCAATTGATTTAGTTGACG+AGG 0.575315 1_4:+2519756 Msa0143560:CDS
GGTGCCGAGCATCTCATAAG+TGG 0.576050 1_4:+2521330 Msa0143560:CDS
AGATTCGTCACCACCGACAT+TGG 0.576451 1_4:-2507296 None:intergenic
ATCTTGAAGGTAGCACTGAT+GGG 0.576475 1_4:+2509310 Msa0143560:CDS
ATCTTGAAGGTAGCACTGAT+GGG 0.576475 1_4:+2520397 Msa0143560:CDS
CGTGGACAACTTAGATGCAT+CGG 0.576960 1_4:+2508060 Msa0143560:CDS
CGTGGACAACTTAGATGCAT+CGG 0.576960 1_4:+2519139 Msa0143560:CDS
TGTTGGTGAAAATGGATATG+AGG 0.579804 1_4:+2521953 Msa0143560:CDS
CAGAAATTAAAGTGGATGCA+AGG 0.580621 1_4:-2507243 None:intergenic
TTCAAACCTATGCTTGCTCG+TGG 0.581065 1_4:+2508042 Msa0143560:CDS
TTCAAACCTATGCTTGCTCG+TGG 0.581065 1_4:+2519121 Msa0143560:CDS
GAGGTTGTAAGCCGATGGAC+CGG 0.583520 1_4:+2509387 Msa0143560:CDS
GAGGTTGTAAGCCGATGGAC+CGG 0.583520 1_4:+2520474 Msa0143560:CDS
AGTTGTCCACGAGCAAGCAT+AGG 0.583829 1_4:-2508048 None:intergenic
AGTTGTCCACGAGCAAGCAT+AGG 0.583829 1_4:-2519127 None:intergenic
AGCAATTGATGAAGGTTGCA+AGG 0.584736 1_4:+2510408 Msa0143560:CDS
AGCAATTGATGAAGGTTGCA+AGG 0.584736 1_4:+2521478 Msa0143560:CDS
TAGCTGAGGTTGTAAGCCGA+TGG 0.585089 1_4:+2509382 Msa0143560:CDS
TAGCTGAGGTTGTAAGCCGA+TGG 0.585089 1_4:+2520469 Msa0143560:CDS
ATTATCATGACTTCAAACCT+TGG 0.585540 1_4:+2521309 Msa0143560:CDS
GGTTGCAAGGTTGCAAATGA+AGG 0.587123 1_4:+2510421 Msa0143560:CDS
GGTTGCAAGGTTGCAAATGA+AGG 0.587123 1_4:+2521491 Msa0143560:CDS
GAGCTTTCTGGTACATGCTG+TGG 0.588543 1_4:-2507382 None:intergenic
CTTTCTGGTACATGCTGTGG+TGG 0.588981 1_4:-2507379 None:intergenic
ATATGGTGCAATTGAAGAGG+TGG 0.594534 1_4:+2509272 Msa0143560:CDS
ATATGGTGCAATTGAAGAGG+TGG 0.594534 1_4:+2520359 Msa0143560:CDS
TGGTCGATGTCAAGGATCAA+TGG 0.595645 1_4:+2519084 Msa0143560:CDS
AAGTCCACTTATGAGATGCT+CGG 0.596761 1_4:-2510264 None:intergenic
AAGTCCACTTATGAGATGCT+CGG 0.596761 1_4:-2521334 None:intergenic
TTGATGCTGACGGAAACTGT+TGG 0.601313 1_4:+2509348 Msa0143560:CDS
TACCGAAACCGGTTGGACCA+AGG 0.602227 1_4:-2509584 None:intergenic
TACCGACACCGGTTGGACCA+AGG 0.602227 1_4:-2520671 None:intergenic
GGAAGATTAACTGATGGCCA+AGG 0.602336 1_4:+2510188 Msa0143560:CDS
TGCTGAGAGAGGAATCGCAT+TGG 0.604657 1_4:+2521530 Msa0143560:CDS
GGACTAAAAGAGAAATATGA+GGG 0.605026 1_4:+2508201 Msa0143560:CDS
ACAACTGTATGCATTGATGC+TGG 0.605777 1_4:+2510749 Msa0143560:CDS
ACAACTGTATGCATTGATGC+TGG 0.605777 1_4:+2521819 Msa0143560:CDS
TACCGTGTGGAAAAGAATGG+AGG 0.607054 1_4:+2510794 Msa0143560:CDS
TACCGTGTGGAAAAGAATGG+AGG 0.607054 1_4:+2521864 Msa0143560:CDS
AAAGAAGTGGAAGATGCTGA+AGG 0.609450 1_4:+2507937 Msa0143560:CDS
AAAGAAGTGGAAGATGCTGA+AGG 0.609450 1_4:+2519016 Msa0143560:CDS
CAGCCTCCTGTAGTGCAAAG+AGG 0.611133 1_4:-2509212 None:intergenic
CAGCCTCCTGTAGTGCAAAG+AGG 0.611133 1_4:-2520299 None:intergenic
ATGCATTGATGCTGGTCCAA+AGG 0.614033 1_4:+2510757 Msa0143560:CDS
ATGCATTGATGCTGGTCCAA+AGG 0.614033 1_4:+2521827 Msa0143560:CDS
ACCGTGTGGAAAAGAATGGA+GGG 0.614544 1_4:+2510795 Msa0143560:CDS
ACCGTGTGGAAAAGAATGGA+GGG 0.614544 1_4:+2521865 Msa0143560:CDS
GCTGTAGTGAGATCGAGAGC+TGG 0.614617 1_4:+2520609 Msa0143560:CDS
ATTATCATGACCTCAAACCT+CGG 0.614824 1_4:+2510239 Msa0143560:CDS
GCTGTAGTGAGATCGAGAGC+TGG 0.615407 1_4:+2509522 Msa0143560:CDS
TGTGGTGGAGGCTGTTGAGT+AGG 0.617546 1_4:-2507364 None:intergenic
GGTAGCACTGATGGGAACAA+AGG 0.620040 1_4:+2509318 Msa0143560:CDS
GGTAGCACTGATGGGAACAA+AGG 0.620040 1_4:+2520405 Msa0143560:CDS
GCTAGTCGTCTTGCTGAGAG+AGG 0.621064 1_4:+2510449 Msa0143560:CDS
GCTAGTCGTCTTGCTGAGAG+AGG 0.621064 1_4:+2521519 Msa0143560:CDS
GGGAGATTAACCGATGGCCA+AGG 0.621274 1_4:+2521258 Msa0143560:CDS
GACGATGGAAGATTAACTGA+TGG 0.625680 1_4:+2510182 Msa0143560:CDS
ACGATATGGTGCAATTGAAG+AGG 0.629693 1_4:+2509269 Msa0143560:CDS
ACGATATGGTGCAATTGAAG+AGG 0.629693 1_4:+2520356 Msa0143560:CDS
TCACTGGTATACCGGTCCAT+CGG 0.631048 1_4:-2509398 None:intergenic
TCACTGGTATACCGGTCCAT+CGG 0.631048 1_4:-2520485 None:intergenic
AATGGTTAGACTTGACATGT+CGG 0.631546 1_4:+2520746 Msa0143560:CDS
CTTCAATTGCACCATATCGT+AGG 0.632100 1_4:-2509266 None:intergenic
CTTCAATTGCACCATATCGT+AGG 0.632100 1_4:-2520353 None:intergenic
TCGGTCGCGAGCAACTTGCA+TGG 0.632357 1_4:-2510300 None:intergenic
TCGGTCGCGAGCAACTTGCA+TGG 0.632357 1_4:-2521370 None:intergenic
GATGGTTAGACTTGACATGT+CGG 0.635197 1_4:+2509659 Msa0143560:CDS
TATATTGGACATGACGAAGG+TGG 0.635832 1_4:+2510056 Msa0143560:CDS
TATATTGGACATGACGAAGG+TGG 0.635832 1_4:+2521126 Msa0143560:CDS
TGCTGAAACTGGTGTGAAGT+CGG 0.635880 1_4:+2510826 Msa0143560:CDS
AGGTATATTGGACATGACGA+AGG 0.636676 1_4:+2510053 Msa0143560:intron
AGGTATATTGGACATGACGA+AGG 0.636676 1_4:+2521123 Msa0143560:intron
TCATGCTTTGGAGAAAGAGG+AGG 0.637227 1_4:+2519867 Msa0143560:CDS
AGAGAAAGAGAGGATTGATG+AGG 0.639029 1_4:+2520245 Msa0143560:CDS
GTCGCTGGTACTCAGTATAG+GGG 0.640895 1_4:+2518962 Msa0143560:CDS
AGGTGAGAACTTGATGCTGA+CGG 0.642271 1_4:+2509338 Msa0143560:CDS
AGGTGAGAACTTGATGCTGA+CGG 0.642271 1_4:+2520425 Msa0143560:CDS
GGATTAAAAGAGAAATATGA+GGG 0.642759 1_4:+2519280 Msa0143560:CDS
ATGGTGCTAGACCAATTAGA+AGG 0.648738 1_4:+2510660 Msa0143560:CDS
GGTTGGACCAAGGAATAGGA+AGG 0.662826 1_4:-2509574 None:intergenic
TTATGAGATGCTCGGCACCA+AGG 0.663875 1_4:-2521326 None:intergenic
CACTACAGGAGGCTGAGAGG+CGG 0.665779 1_4:+2509220 Msa0143560:CDS
CACTACAGGAGGCTGAGAGG+CGG 0.665779 1_4:+2520307 Msa0143560:CDS
CCATGCTTTGGAGAAAGAGG+AGG 0.666114 1_4:+2508781 Msa0143560:CDS
TGGACCAGATCAAATAGCTG+AGG 0.666193 1_4:+2520455 Msa0143560:CDS
AGGAATAGGAAGGAACCAGT+TGG 0.666288 1_4:-2509564 None:intergenic
AGGAATAGGAAGGAACCAGT+TGG 0.666288 1_4:-2520651 None:intergenic
GTGCTAGACCAATTAGAAGG+TGG 0.668833 1_4:+2510663 Msa0143560:CDS
AGCAGTTAAAGCTGTCGCTG+AGG 0.669051 1_4:+2509500 Msa0143560:CDS
GGTTGGACCAAGGAATAGGA+AGG 0.669647 1_4:-2520661 None:intergenic
GCTCCTCTTTGCACTACAGG+AGG 0.670257 1_4:+2509209 Msa0143560:CDS
GCTCCTCTTTGCACTACAGG+AGG 0.670257 1_4:+2520296 Msa0143560:CDS
TCAACTTGACAGTCAGCCTG+AGG 0.670885 1_4:+2519798 Msa0143560:CDS
TTGCACTACAGGAGGCTGAG+AGG 0.672526 1_4:+2509217 Msa0143560:CDS
TTGCACTACAGGAGGCTGAG+AGG 0.672526 1_4:+2520304 Msa0143560:CDS
TCAACTTGACAGTCAGCCAG+AGG 0.673368 1_4:+2508712 Msa0143560:CDS
GGGCTAGACCAATTAGAAGG+TGG 0.678756 1_4:+2521733 Msa0143560:CDS
AAGTGATTTGGTATACCGTG+TGG 0.679627 1_4:+2510781 Msa0143560:CDS
AAGTGATTTGGTATACCGTG+TGG 0.679627 1_4:+2521851 Msa0143560:CDS
AGCAGTTAAAGCTGTCGCTG+GGG 0.679969 1_4:+2520587 Msa0143560:CDS
GTCGCTGGTACTGAGTATAG+GGG 0.684590 1_4:+2507883 Msa0143560:CDS
GATTGATTGGTGCACCACCA+GGG 0.685797 1_4:+2520796 Msa0143560:CDS
GATTGATCGGTGCACCACCA+GGG 0.688237 1_4:+2509709 Msa0143560:CDS
CGATGGCCAAGGAAGAACTG+TGG 0.695583 1_4:+2521269 Msa0143560:CDS
TGGACCAGATCAAATAGCTG+AGG 0.699839 1_4:+2509368 Msa0143560:CDS
AATACAATATCTTACCCTGG+TGG 0.701412 1_4:-2509723 None:intergenic
AATACAATATCTTACCCTGG+TGG 0.701412 1_4:-2520810 None:intergenic
CAGGAAGCACAGAAGTCACG+CGG 0.704887 1_4:+2507433 Msa0143560:CDS
TTATGAGATGCTCGGCACCG+AGG 0.725766 1_4:-2510256 None:intergenic
GATGACGGGAGATTAACCGA+TGG 0.733986 1_4:+2521252 Msa0143560:CDS
AAGGTGGCTTGAGAAGAATG+TGG 0.734759 1_4:+2521749 Msa0143560:CDS
GATACCATTAGTATTCTCCG+TGG 0.753882 1_4:+2508180 Msa0143560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAATTTATTTTATTTT+TGG - chr1_4:2511784-2511803 None:intergenic 0.0%
!!! CTTTAAGTTTTAATTTTTTT+TGG + chr1_4:2511185-2511204 Msa0143560:intron 10.0%
!!! AATTCTTTTTTTCTTATATA+TGG - chr1_4:2511997-2512016 None:intergenic 10.0%
!! TAAAATAAAAGTTGAAATAA+TGG + chr1_4:2512557-2512576 Msa0143560:intron 10.0%
!! AAAATAAAAGTTGAAATAAT+GGG + chr1_4:2512558-2512577 Msa0143560:intron 10.0%
!! ATAAAAATGGAATATATTAA+CGG - chr1_4:2513209-2513228 None:intergenic 10.0%
!!! ATATTATTTTGTTATATTGT+TGG - chr1_4:2513529-2513548 None:intergenic 10.0%
!!! AACTTTAAAATAAATAATTG+TGG + chr1_4:2514005-2514024 Msa0143560:intron 10.0%
!!! TAATGTATTTTATCTAAAAT+TGG + chr1_4:2514248-2514267 Msa0143560:intron 10.0%
!!! TATTTATTTTCAAAAGTTAT+AGG + chr1_4:2514510-2514529 Msa0143560:intron 10.0%
!!! CATTTTAAATTAATTTTACA+CGG + chr1_4:2514543-2514562 Msa0143560:intron 10.0%
!!! AATATTTTCACATAAAAAAA+TGG - chr1_4:2515634-2515653 None:intergenic 10.0%
!!! ATTAATTTTAGAGAAAAATT+GGG - chr1_4:2517483-2517502 None:intergenic 10.0%
!!! TTATTATTTTTTTGTAATGT+AGG + chr1_4:2518198-2518217 Msa0143560:intron 10.0%
!! TAAAAAAAATGTTATATTTG+AGG + chr1_4:2521646-2521665 Msa0143560:intron 10.0%
!! AAAAAAAATGTTATATTTGA+GGG + chr1_4:2521647-2521666 Msa0143560:intron 10.0%
!!! TTAAAAGCAAATAATTATTT+TGG - chr1_4:2522231-2522250 None:intergenic 10.0%
!! AATGAGATAATAAATAGTTA+AGG + chr1_4:2508459-2508478 Msa0143560:intron 15.0%
!!! ATAAGATTTAGTGATTTTAT+TGG + chr1_4:2508520-2508539 Msa0143560:intron 15.0%
!! GATAAAATGTTTAATATGTT+TGG + chr1_4:2509790-2509809 Msa0143560:intron 15.0%
!! TAAAAAAAATGCTATATTTG+AGG + chr1_4:2510576-2510595 Msa0143560:intron 15.0%
!! AAAAAAAATGCTATATTTGA+GGG + chr1_4:2510577-2510596 Msa0143560:intron 15.0%
!!! CTTAAAGCAAATAATTATTT+TGG - chr1_4:2511172-2511191 None:intergenic 15.0%
!!! TTGAATTTTTTTTTTCTTCT+TGG + chr1_4:2511349-2511368 Msa0143560:intron 15.0%
!! AATTTAATAGCAAAAATAAC+AGG + chr1_4:2511795-2511814 Msa0143560:intron 15.0%
!!! TTTTTTTCATCCATTAAATT+TGG + chr1_4:2512099-2512118 Msa0143560:intron 15.0%
!! AAACAATTCATATTGTAATT+TGG + chr1_4:2512238-2512257 Msa0143560:intron 15.0%
!!! TTTTTTTGAAGACATAAAAA+TGG - chr1_4:2513222-2513241 None:intergenic 15.0%
!!! TTACACTTTTTAAATGATAA+AGG + chr1_4:2513668-2513687 Msa0143560:intron 15.0%
!! GAAAAATCCATATAATAAAT+AGG - chr1_4:2513903-2513922 None:intergenic 15.0%
!!! TTTTGTTTCTAAAAATGTTT+GGG - chr1_4:2514969-2514988 None:intergenic 15.0%
!!! ATTTTGTTTCTAAAAATGTT+TGG - chr1_4:2514970-2514989 None:intergenic 15.0%
!!! TCTTTCATTTTATTTTCTAA+GGG - chr1_4:2516027-2516046 None:intergenic 15.0%
!!! CTTTTTTCTTTTTTAAAGTA+TGG - chr1_4:2516133-2516152 None:intergenic 15.0%
!!! ATTTTATAACTTATACATAC+CGG + chr1_4:2516605-2516624 Msa0143560:intron 15.0%
!! AAAACAAATTATGAGAAAAA+AGG + chr1_4:2517267-2517286 Msa0143560:intron 15.0%
!! AAAGAAAAATAAAACTATAG+AGG - chr1_4:2517390-2517409 None:intergenic 15.0%
!!! TTAATTTTAGAGAAAAATTG+GGG - chr1_4:2517482-2517501 None:intergenic 15.0%
!!! GATTAATTTTAGAGAAAAAT+TGG - chr1_4:2517484-2517503 None:intergenic 15.0%
!!! GAATTTAAAGTACAAATTTA+AGG - chr1_4:2517702-2517721 None:intergenic 15.0%
!!! TATTTAGCATTAAATGTTTT+TGG + chr1_4:2517957-2517976 Msa0143560:intron 15.0%
!! AAAAATTAAAAGAAAACAGA+TGG - chr1_4:2519408-2519427 None:intergenic 15.0%
!! AATGAGATAATAAATAGTTA+CGG + chr1_4:2508459-2508478 Msa0143560:intron 15.0%
!!! ACAAGATTTATTGATTTTAT+TGG + chr1_4:2519595-2519614 Msa0143560:intron 15.0%
!! TTTATCTCCAAATATAATTT+AGG - chr1_4:2520863-2520882 None:intergenic 15.0%
!!! GATAAAACATTTAATTTGTT+TGG + chr1_4:2520877-2520896 Msa0143560:intron 15.0%
!! TCTTTAAATATTTCAAATGT+CGG + chr1_4:2520926-2520945 Msa0143560:intron 15.0%
!! AAAAAAATGTTATATTTGAG+GGG + chr1_4:2521648-2521667 Msa0143560:intron 15.0%
!!! ATCTTTTGTAAGTAATTTTA+TGG - chr1_4:2522137-2522156 None:intergenic 15.0%
!!! TGAAGTTTTTCTTTTAACTA+AGG + chr1_4:2508846-2508865 Msa0143560:intron 20.0%
!!! GAAGTTTTTCTTTTAACTAA+GGG + chr1_4:2508847-2508866 Msa0143560:intron 20.0%
!! ATGGTAAAATAAAAAATGAC+TGG + chr1_4:2508987-2509006 Msa0143560:intron 20.0%
!! ATTAGAATAAAGGAGAATAA+TGG - chr1_4:2509059-2509078 None:intergenic 20.0%
!! GACATCAATAATTAGAATAA+AGG - chr1_4:2509069-2509088 None:intergenic 20.0%
!! AATGCAATAAAAAATCTTGA+AGG + chr1_4:2509297-2509316 Msa0143560:CDS 20.0%
!! TCTCTAAATATTTCAAATGT+CGG + chr1_4:2509839-2509858 Msa0143560:intron 20.0%
!! AAAAACCAAATTTCAAATGT+CGG - chr1_4:2509907-2509926 None:intergenic 20.0%
!!! AAGTCTAAATAAGTATTGAA+AGG - chr1_4:2509965-2509984 None:intergenic 20.0%
!! AAAAAAATGCTATATTTGAG+GGG + chr1_4:2510578-2510597 Msa0143560:intron 20.0%
!!! CATCTTTGTTAGTAATTTTA+TGG - chr1_4:2511083-2511102 None:intergenic 20.0%
!!! AAAAAATACGCTTTATTGTA+AGG - chr1_4:2511560-2511579 None:intergenic 20.0%
!! TAGAGGTAATAATAAAAAAG+AGG - chr1_4:2511724-2511743 None:intergenic 20.0%
!! GAGACAATACAAAATATATA+GGG - chr1_4:2511752-2511771 None:intergenic 20.0%
!! AGAGACAATACAAAATATAT+AGG - chr1_4:2511753-2511772 None:intergenic 20.0%
!!! TTTTTTTCTTATATATGGTG+TGG - chr1_4:2511992-2512011 None:intergenic 20.0%
!! GAATTAATGACCAAATTTAA+TGG - chr1_4:2512112-2512131 None:intergenic 20.0%
!! CATATACAATACCAAATAAA+CGG + chr1_4:2512189-2512208 Msa0143560:intron 20.0%
!!! GTATTTTTTTTCCGTTTATT+TGG - chr1_4:2512203-2512222 None:intergenic 20.0%
!! ACACATAAGAAGAATTAATA+TGG - chr1_4:2512478-2512497 None:intergenic 20.0%
!!! AATTCTTCTTATGTGTTATT+TGG + chr1_4:2512482-2512501 Msa0143560:intron 20.0%
!! TTCACTATCTATTTAAACTA+TGG + chr1_4:2512513-2512532 Msa0143560:intron 20.0%
!!! TGTTGGTTTGAATATTATTA+TGG - chr1_4:2512944-2512963 None:intergenic 20.0%
!! TAATAATATTCAAACCAACA+TGG + chr1_4:2512944-2512963 Msa0143560:intron 20.0%
!!! AATAAGGTCAATTTTATGTA+CGG + chr1_4:2513017-2513036 Msa0143560:intron 20.0%
!! AACGTTTAAAAATTATGAAC+TGG + chr1_4:2513395-2513414 Msa0143560:intron 20.0%
!! TTCATTGAAATAGATAATCA+TGG - chr1_4:2513505-2513524 None:intergenic 20.0%
!! TCTATAATAAAGATTGATGT+TGG - chr1_4:2513580-2513599 None:intergenic 20.0%
!!! ATAGAAAAAGTTGTTGTTTA+AGG + chr1_4:2513595-2513614 Msa0143560:intron 20.0%
!!! TAGAAAAAGTTGTTGTTTAA+GGG + chr1_4:2513596-2513615 Msa0143560:intron 20.0%
!! GGATAATAAAAAAGTAAGTA+TGG + chr1_4:2513627-2513646 Msa0143560:intron 20.0%
!! TAAATGATAAAGGAAAAAAC+TGG + chr1_4:2513678-2513697 Msa0143560:intron 20.0%
!! GTTATTTGTATGAAAAATTG+AGG + chr1_4:2513765-2513784 Msa0143560:intron 20.0%
!!! GAAAAATTGAGGATATTTTT+TGG + chr1_4:2513776-2513795 Msa0143560:intron 20.0%
!!! TTTAGCTCCTATTTATTATA+TGG + chr1_4:2513893-2513912 Msa0143560:intron 20.0%
!!! TATTTAAGATCGAAAGAAAT+AGG - chr1_4:2514124-2514143 None:intergenic 20.0%
!! TTCGATCTTAAATATGATAT+AGG + chr1_4:2514130-2514149 Msa0143560:intron 20.0%
!! ATGTCTATTGTAATTAGAAT+CGG + chr1_4:2514299-2514318 Msa0143560:intron 20.0%
!! TGAAATAGATCAATTATTTC+GGG - chr1_4:2514648-2514667 None:intergenic 20.0%
!! GTGAAATAGATCAATTATTT+CGG - chr1_4:2514649-2514668 None:intergenic 20.0%
!! CAAAATATTCATCTAAACTT+GGG - chr1_4:2514865-2514884 None:intergenic 20.0%
!! TCAAAATATTCATCTAAACT+TGG - chr1_4:2514866-2514885 None:intergenic 20.0%
!!! ATCAATCACAAATTTTAAGA+TGG + chr1_4:2515330-2515349 Msa0143560:intron 20.0%
!! AAGTCTATCTAATATTTGTT+TGG + chr1_4:2515358-2515377 Msa0143560:intron 20.0%
!! GTTCTCATTTATAAACATTT+GGG - chr1_4:2515436-2515455 None:intergenic 20.0%
!! TGTTCTCATTTATAAACATT+TGG - chr1_4:2515437-2515456 None:intergenic 20.0%
!! ATCATTAGTTCAATTCTTAT+TGG + chr1_4:2515666-2515685 Msa0143560:intron 20.0%
!!! TGATTGATTTAAAAAGAGTA+TGG + chr1_4:2515750-2515769 Msa0143560:intron 20.0%
!! ATAGATGTAACAAAAATTAG+TGG + chr1_4:2515819-2515838 Msa0143560:intron 20.0%
!! TAGATGTAACAAAAATTAGT+GGG + chr1_4:2515820-2515839 Msa0143560:intron 20.0%
!! TTGATTATGACTTTATGATA+TGG + chr1_4:2515927-2515946 Msa0143560:intron 20.0%
!!! CTCTTTCATTTTATTTTCTA+AGG - chr1_4:2516028-2516047 None:intergenic 20.0%
!!! ATGGCTGTTATTTTATTTTT+AGG + chr1_4:2516869-2516888 Msa0143560:intron 20.0%
!!! ACAAGCAAGATTTTAAAAAA+CGG + chr1_4:2516956-2516975 Msa0143560:intron 20.0%
!! TTCGATAAAATTATCAAGTT+TGG + chr1_4:2517980-2517999 Msa0143560:intron 20.0%
!!! TTTTTTGTAATGTAGGTAAA+TGG + chr1_4:2518205-2518224 Msa0143560:intron 20.0%
!! AATATTGCATTACACTTTAA+AGG - chr1_4:2519467-2519486 None:intergenic 20.0%
!! ATCTTAAAACAGAAGTTAAA+AGG + chr1_4:2519627-2519646 Msa0143560:intron 20.0%
!!! TTGAGTTTTTCTTTTAACTA+AGG + chr1_4:2519932-2519951 Msa0143560:intron 20.0%
!!! TGAGTTTTTCTTTTAACTAA+GGG + chr1_4:2519933-2519952 Msa0143560:intron 20.0%
!! ATTAGAATAAAGGAGAATAA+TGG - chr1_4:2509059-2509078 None:intergenic 20.0%
!! GTCATCAATAATTAGAATAA+AGG - chr1_4:2520156-2520175 None:intergenic 20.0%
!! AATGCAATAAAAAATCTTGA+AGG + chr1_4:2509297-2509316 Msa0143560:CDS 20.0%
!!! CTTTGATAATGAAAATCAAA+TGG + chr1_4:2520728-2520747 Msa0143560:CDS 20.0%
!! GTAAAAGCCTAAATTATATT+TGG + chr1_4:2520853-2520872 Msa0143560:intron 20.0%
!! TTTGTTGAGATTTATTTAAC+CGG + chr1_4:2520960-2520979 Msa0143560:intron 20.0%
!! AAGTCTAAACAAGTATTAAT+AGG - chr1_4:2521035-2521054 None:intergenic 20.0%
!!! AAGTTTAGTTTTTGTTCATA+TGG + chr1_4:2522308-2522327 Msa0143560:intron 20.0%
! ATTGAGATCAGAAATTAAAG+TGG - chr1_4:2507254-2507273 None:intergenic 25.0%
!! ACTTTAATTTCTGATCTCAA+TGG + chr1_4:2507253-2507272 Msa0143560:CDS 25.0%
!!! TTGTTTTAAAACTCTTTCCA+CGG - chr1_4:2507329-2507348 None:intergenic 25.0%
! TCTTTCAATGACTTTGATAA+TGG - chr1_4:2507410-2507429 None:intergenic 25.0%
!!! TTTGAAGCATTGAAAACTTA+TGG + chr1_4:2507625-2507644 Msa0143560:intron 25.0%
! AAGAACAATCCTGTTATTAT+AGG + chr1_4:2507742-2507761 Msa0143560:intron 25.0%
! TGATGTTAAGTTATTTGCTT+TGG + chr1_4:2507846-2507865 Msa0143560:CDS 25.0%
!! TAAGTTATTTGCTTTGGATA+TGG + chr1_4:2507852-2507871 Msa0143560:CDS 25.0%
!! AAGTTATTTGCTTTGGATAT+GGG + chr1_4:2507853-2507872 Msa0143560:CDS 25.0%
! ATATAGGCAATATGTTGAAA+AGG + chr1_4:2508101-2508120 Msa0143560:CDS 25.0%
! GTATAATTAATTACTCCATC+TGG + chr1_4:2508315-2508334 Msa0143560:intron 25.0%
! TAAATAGTTAAGGCTGTTAT+AGG + chr1_4:2508469-2508488 Msa0143560:intron 25.0%
! TATGTGTACACAATCTTAAA+AGG + chr1_4:2508543-2508562 Msa0143560:intron 25.0%
! GAGTATTTATGTATTGAATG+TGG + chr1_4:2508574-2508593 Msa0143560:intron 25.0%
! ATTTATGTATTGAATGTGGA+TGG + chr1_4:2508578-2508597 Msa0143560:intron 25.0%
!!! TGTTTCTGTTTTGTTTGTTA+AGG + chr1_4:2508629-2508648 Msa0143560:intron 25.0%
!!! GTTTCTGTTTTGTTTGTTAA+GGG + chr1_4:2508630-2508649 Msa0143560:intron 25.0%
!!! TTTTTCTTTTAACTAAGGGT+TGG + chr1_4:2508851-2508870 Msa0143560:intron 25.0%
! TTATCCAAGAATCGATTATA+TGG + chr1_4:2508968-2508987 Msa0143560:intron 25.0%
!! TTTACCATATAATCGATTCT+TGG - chr1_4:2508975-2508994 None:intergenic 25.0%
! GTAAAATAAAAAATGACTGG+TGG + chr1_4:2508990-2509009 Msa0143560:intron 25.0%
!!! CTTTGATAATGAAAATCAGA+TGG + chr1_4:2509641-2509660 Msa0143560:CDS 25.0%
! AAAAATACAATATCTTACCC+TGG - chr1_4:2509729-2509748 None:intergenic 25.0%
! TTTATCTCCAAGTATAACTT+AGG - chr1_4:2509776-2509795 None:intergenic 25.0%
!! TTTAACCGACATTTGAAATT+TGG + chr1_4:2509899-2509918 Msa0143560:intron 25.0%
! CTGAAAACTCATTTCATAAT+TGG - chr1_4:2510035-2510054 None:intergenic 25.0%
!! CAATTATGAAATGAGTTTTC+AGG + chr1_4:2510033-2510052 Msa0143560:intron 25.0%
!!! AAATGAGTTTTCAGGTATAT+TGG + chr1_4:2510041-2510060 Msa0143560:intron 25.0%
!!! TGATTATATAAGAGCACTTA+CGG - chr1_4:2510534-2510553 None:intergenic 25.0%
!!! ATTTTGATTCAGATTCCAAA+TGG + chr1_4:2510851-2510870 Msa0143560:CDS 25.0%
!!! ATCTGTTTTATTCGTTCTTT+TGG + chr1_4:2511024-2511043 Msa0143560:intron 25.0%
!! TACTCAAATATGTTTTTCGT+TGG + chr1_4:2511047-2511066 Msa0143560:intron 25.0%
!! ATTACTAACAAAGATGCTTT+TGG + chr1_4:2511087-2511106 Msa0143560:intron 25.0%
!! TTACTAACAAAGATGCTTTT+GGG + chr1_4:2511088-2511107 Msa0143560:intron 25.0%
!! AAGTTCATTCTCATCAATTT+TGG + chr1_4:2511273-2511292 Msa0143560:intron 25.0%
! CAAATGAGTTACATATATGT+TGG + chr1_4:2511416-2511435 Msa0143560:intron 25.0%
! AAATTTGTGTTGAGTTTAGT+CGG - chr1_4:2511507-2511526 None:intergenic 25.0%
! AGATGAAGTATACTATAAGA+AGG - chr1_4:2511611-2511630 None:intergenic 25.0%
! TTAATAGCAAAAATAACAGG+AGG + chr1_4:2511798-2511817 Msa0143560:intron 25.0%
! ATTTCATCTCAAAAACAAGA+AGG + chr1_4:2511895-2511914 Msa0143560:intron 25.0%
! AATTTAATATACTGAGAGCA+TGG + chr1_4:2511930-2511949 Msa0143560:intron 25.0%
! CGTTTATTTGGTATTGTATA+TGG - chr1_4:2512191-2512210 None:intergenic 25.0%
! AAGAATTAATATGGCAGATT+GGG - chr1_4:2512469-2512488 None:intergenic 25.0%
!! TGAAATAATGGGACATAAAA+AGG + chr1_4:2512569-2512588 Msa0143560:intron 25.0%
! AAAATTTATACCCATATGCA+CGG + chr1_4:2512693-2512712 Msa0143560:intron 25.0%
!! ATTTAAAATACCGTGCATAT+GGG - chr1_4:2512706-2512725 None:intergenic 25.0%
!! AATTTAAAATACCGTGCATA+TGG - chr1_4:2512707-2512726 None:intergenic 25.0%
! TAAATTATCATCACTACAAG+TGG - chr1_4:2512786-2512805 None:intergenic 25.0%
! AAATGGTCATCAATATTAAG+CGG - chr1_4:2512813-2512832 None:intergenic 25.0%
! TACAAAGTAACCAAATAAGT+TGG - chr1_4:2512887-2512906 None:intergenic 25.0%
!! TTATTTGGTTACTTTGTACA+TGG + chr1_4:2512889-2512908 Msa0143560:intron 25.0%
!! TTTGGAATGAACGTAATAAT+AGG + chr1_4:2512916-2512935 Msa0143560:intron 25.0%
! AAGTTAAATATCACTCTTTG+TGG + chr1_4:2512982-2513001 Msa0143560:intron 25.0%
! TATGACTGACTGTTTATAAT+AGG + chr1_4:2513142-2513161 Msa0143560:intron 25.0%
! ATGACTGACTGTTTATAATA+GGG + chr1_4:2513143-2513162 Msa0143560:intron 25.0%
!! TTTTAGTACATCTTGTACTT+AGG + chr1_4:2513173-2513192 Msa0143560:intron 25.0%
!!! TTGTTGTTTAAGGGTATAAT+TGG + chr1_4:2513605-2513624 Msa0143560:intron 25.0%
!! TGTTGTTTAAGGGTATAATT+GGG + chr1_4:2513606-2513625 Msa0143560:intron 25.0%
!!! ATTGAGGATATTTTTTGGAA+AGG + chr1_4:2513781-2513800 Msa0143560:intron 25.0%
! TATCAACTAATCTAAGTTCA+CGG + chr1_4:2514190-2514209 Msa0143560:intron 25.0%
! ATGTCTCTTGTAATTAGAAT+CGG + chr1_4:2514375-2514394 Msa0143560:intron 25.0%
! TTTATTGTGTAAAAGACACA+TGG - chr1_4:2514413-2514432 None:intergenic 25.0%
! TCAAATTCGTGTTAAATCAA+AGG + chr1_4:2514772-2514791 Msa0143560:intron 25.0%
!! TCAAAGGTAAAAACAGTTTT+TGG + chr1_4:2514788-2514807 Msa0143560:intron 25.0%
! TTTACCTTTCCAAAAAAGAA+AGG + chr1_4:2514887-2514906 Msa0143560:intron 25.0%
!!! AAAAAAAGGCCTTTCTTTTT+TGG - chr1_4:2514899-2514918 None:intergenic 25.0%
! ATTTCAGATTCAAAACGAAA+AGG + chr1_4:2515091-2515110 Msa0143560:intron 25.0%
! AGTACAAATAAGAAAAAGTG+AGG + chr1_4:2515265-2515284 Msa0143560:intron 25.0%
!! TGTCTTTTTGAATTTGTGTT+TGG - chr1_4:2515501-2515520 None:intergenic 25.0%
!! ATAATTTTCTCACTGGAAAT+TGG - chr1_4:2515870-2515889 None:intergenic 25.0%
! TATGACTTTATGATATGGAT+AGG + chr1_4:2515932-2515951 Msa0143560:intron 25.0%
! ATGACTTTATGATATGGATA+GGG + chr1_4:2515933-2515952 Msa0143560:intron 25.0%
! ATGAAAGAGAAATTACAACT+TGG + chr1_4:2516039-2516058 Msa0143560:intron 25.0%
!! TCTGATATATTGCCTATTTT+AGG + chr1_4:2516391-2516410 Msa0143560:intron 25.0%
!! CTGATATATTGCCTATTTTA+GGG + chr1_4:2516392-2516411 Msa0143560:intron 25.0%
!!! CTTCACAGTTTTATTTTTGT+TGG + chr1_4:2516427-2516446 Msa0143560:intron 25.0%
! TCATATTCCTTGAAAATCAA+CGG - chr1_4:2516534-2516553 None:intergenic 25.0%
!! TCAAGGAATATGAAACTTTT+AGG + chr1_4:2516541-2516560 Msa0143560:intron 25.0%
! CTTTATACATATTCTCACAA+TGG + chr1_4:2516850-2516869 Msa0143560:intron 25.0%
!!! GCTGTTATTTTATTTTTAGG+AGG + chr1_4:2516872-2516891 Msa0143560:intron 25.0%
!!! TATTTTTAGGAGGAACAATT+AGG + chr1_4:2516882-2516901 Msa0143560:intron 25.0%
!!! ATTTTTAGGAGGAACAATTA+GGG + chr1_4:2516883-2516902 Msa0143560:intron 25.0%
! AGATTACATGAATCGTTAAT+CGG - chr1_4:2516915-2516934 None:intergenic 25.0%
! ATTAACGATTCATGTAATCT+AGG + chr1_4:2516915-2516934 Msa0143560:intron 25.0%
! TTAAAATCTTGCTTGTGATA+AGG - chr1_4:2516952-2516971 None:intergenic 25.0%
! ATATTGTGGATTTCTTGTAT+TGG - chr1_4:2517180-2517199 None:intergenic 25.0%
! CAAGAAATCCACAATATAAT+TGG + chr1_4:2517183-2517202 Msa0143560:intron 25.0%
! TAAACTTGCCAATTATATTG+TGG - chr1_4:2517194-2517213 None:intergenic 25.0%
! TATAATTGGCAAGTTTATGA+TGG + chr1_4:2517197-2517216 Msa0143560:intron 25.0%
!! TTATGCCTTTGTTATGATTA+TGG - chr1_4:2517345-2517364 None:intergenic 25.0%
! AAAGTACAGAAAATTAGAGA+AGG - chr1_4:2517743-2517762 None:intergenic 25.0%
!! TCTAATTTTCTGTACTTTCA+CGG + chr1_4:2517745-2517764 Msa0143560:intron 25.0%
!! ACATGATTTTCTATTCAAGT+TGG + chr1_4:2517928-2517947 Msa0143560:intron 25.0%
! AAAATTATCAAGTTTGGTCA+TGG + chr1_4:2517986-2518005 Msa0143560:intron 25.0%
!! GTTTGTATGATAGATTTGTT+GGG - chr1_4:2518037-2518056 None:intergenic 25.0%
! TGTTTGTATGATAGATTTGT+TGG - chr1_4:2518038-2518057 None:intergenic 25.0%
! ATTGAGATCAGAAATTAAAG+TGG - chr1_4:2507254-2507273 None:intergenic 25.0%
!! ACTTTAATTTCTGATCTCAA+TGG + chr1_4:2507253-2507272 Msa0143560:CDS 25.0%
!!! TTGTTTTAAAACTCTTTCCA+CGG - chr1_4:2507329-2507348 None:intergenic 25.0%
! TCTTTCAATGACTTTGATAA+TGG - chr1_4:2507410-2507429 None:intergenic 25.0%
!!! TTTGAAGCATTGAAAACTTA+TGG + chr1_4:2507625-2507644 Msa0143560:intron 25.0%
! AAGAACAATCCTGTTATTAT+AGG + chr1_4:2507742-2507761 Msa0143560:intron 25.0%
!! TAGATTATTTGCTTTGGATA+TGG + chr1_4:2518931-2518950 Msa0143560:CDS 25.0%
!! AGATTATTTGCTTTGGATAT+GGG + chr1_4:2518932-2518951 Msa0143560:CDS 25.0%
! ATATAGGCAATATGTTGAAA+AGG + chr1_4:2508101-2508120 Msa0143560:CDS 25.0%
! TGGATTAAAAGAGAAATATG+AGG + chr1_4:2519279-2519298 Msa0143560:CDS 25.0%
! GGATTAAAAGAGAAATATGA+GGG + chr1_4:2519280-2519299 Msa0143560:CDS 25.0%
! AAAACAGAAGTTAAAAGGAA+TGG + chr1_4:2519632-2519651 Msa0143560:intron 25.0%
! GAGTATTTATGTATTGAATG+TGG + chr1_4:2508574-2508593 Msa0143560:intron 25.0%
! ATTTATGTATTGAATGTGGA+TGG + chr1_4:2508578-2508597 Msa0143560:intron 25.0%
!!! TTATTGTGGTTTTACTAACA+TGG + chr1_4:2519688-2519707 Msa0143560:intron 25.0%
!!! TTTCTGTTTTGTGTTTGTTA+AGG + chr1_4:2519715-2519734 Msa0143560:intron 25.0%
!!! TTCTGTTTTGTGTTTGTTAA+GGG + chr1_4:2519716-2519735 Msa0143560:intron 25.0%
!!! TTTTTCTTTTAACTAAGGGT+TGG + chr1_4:2508851-2508870 Msa0143560:intron 25.0%
! TGAATAAAACTAACCAAGAA+TGG + chr1_4:2520045-2520064 Msa0143560:intron 25.0%
! TTTACCATATTATCCATTCT+TGG - chr1_4:2520061-2520080 None:intergenic 25.0%
! ATGGTAAAGTAAAAAATGAG+TGG + chr1_4:2520073-2520092 Msa0143560:intron 25.0%
!! CCAATCTTTCTTTATCATTT+TGG - chr1_4:2520521-2520540 None:intergenic 25.0%
! CCAAAATGATAAAGAAAGAT+TGG + chr1_4:2520518-2520537 Msa0143560:CDS 25.0%
! AATGATAAAGAAAGATTGGT+TGG + chr1_4:2520522-2520541 Msa0143560:CDS 25.0%
! AAAAATACAATATCTTACCC+TGG - chr1_4:2509729-2509748 None:intergenic 25.0%
! ATAAACCAAATTTCAAATGC+CGG - chr1_4:2520982-2521001 None:intergenic 25.0%
!!! AAATGAGTTTTCAGGTATAT+TGG + chr1_4:2510041-2510060 Msa0143560:intron 25.0%
!!! ATTTTGATACAGATACCAAA+TGG + chr1_4:2521921-2521940 Msa0143560:CDS 25.0%
!!! AAAATGGATGTGTTTTTTGT+TGG + chr1_4:2522101-2522120 Msa0143560:intron 25.0%
! TTACTTACAAAAGATGCTTT+AGG + chr1_4:2522142-2522161 Msa0143560:intron 25.0%
! TACTTACAAAAGATGCTTTA+GGG + chr1_4:2522143-2522162 Msa0143560:intron 25.0%
!! GAAAGTTTTTATAAGTGCTT+AGG + chr1_4:2522333-2522352 Msa0143560:intron 25.0%
!! AAGTTCATTCTCATCAATTT+TGG + chr1_4:2511273-2511292 Msa0143560:intron 25.0%
!!! GTTTTGTTTGTAAACTTTCG+TGG - chr1_4:2507154-2507173 None:intergenic 30.0%
AGAAAACTAGCAATAAGTTC+AGG + chr1_4:2507196-2507215 Msa0143560:CDS 30.0%
!! AGCAATTGATCGATTGATTT+TGG + chr1_4:2507468-2507487 Msa0143560:intron 30.0%
!! GCAATTGATCGATTGATTTT+GGG + chr1_4:2507469-2507488 Msa0143560:intron 30.0%
!! ATTGATTTTGGGAATTCTTG+AGG + chr1_4:2507480-2507499 Msa0143560:intron 30.0%
AAAATCTTCGCAGTAAAGAA+GGG + chr1_4:2507569-2507588 Msa0143560:intron 30.0%
TTAACATCAGCAAGATTACT+AGG - chr1_4:2507835-2507854 None:intergenic 30.0%
ACAATTTGAAGAAAGGTTGA+AGG + chr1_4:2507906-2507925 Msa0143560:CDS 30.0%
GATGAAATTCATCTTGTTCT+CGG + chr1_4:2507979-2507998 Msa0143560:CDS 30.0%
CAACAACACTTGATGAATAT+AGG + chr1_4:2508085-2508104 Msa0143560:CDS 30.0%
! CATATTTCTCTTTTAGTCCA+CGG - chr1_4:2508200-2508219 None:intergenic 30.0%
TGGACTAAAAGAGAAATATG+AGG + chr1_4:2508200-2508219 Msa0143560:CDS 30.0%
GGACTAAAAGAGAAATATGA+GGG + chr1_4:2508201-2508220 Msa0143560:CDS 30.0%
AACAAGTAAAAAGAACCAGA+TGG - chr1_4:2508333-2508352 None:intergenic 30.0%
GTACACAATCTTAAAAGGAA+TGG + chr1_4:2508548-2508567 Msa0143560:intron 30.0%
ACAATCTTAAAAGGAATGGA+GGG + chr1_4:2508552-2508571 Msa0143560:intron 30.0%
ACTAAATCAATTGCCTTATC+AGG - chr1_4:2508665-2508684 None:intergenic 30.0%
!!! AATTTTGTCGCTTTCATACT+CGG - chr1_4:2508929-2508948 None:intergenic 30.0%
!! GAGAATAATGGATGTTACAA+AGG - chr1_4:2509047-2509066 None:intergenic 30.0%
CTAATTATTGATGTCATTGC+AGG + chr1_4:2509074-2509093 Msa0143560:intron 30.0%
TAGGCCAAAATGATAAAGAA+AGG + chr1_4:2509427-2509446 Msa0143560:CDS 30.0%
! CCAACCTTTCTTTATCATTT+TGG - chr1_4:2509434-2509453 None:intergenic 30.0%
CCAAAATGATAAAGAAAGGT+TGG + chr1_4:2509431-2509450 Msa0143560:CDS 30.0%
! AATGATAAAGAAAGGTTGGT+TGG + chr1_4:2509435-2509454 Msa0143560:CDS 30.0%
GGAATACATGGAAAAATACT+CGG + chr1_4:2509680-2509699 Msa0143560:CDS 30.0%
GTAAAAGCCTAAGTTATACT+TGG + chr1_4:2509766-2509785 Msa0143560:intron 30.0%
TGTTTAATATGTTTGGTCCA+TGG + chr1_4:2509797-2509816 Msa0143560:intron 30.0%
! AAATTTGTAGCTCTTTTCCA+TGG - chr1_4:2509817-2509836 None:intergenic 30.0%
ATGGAAAAGAGCTACAAATT+TGG + chr1_4:2509816-2509835 Msa0143560:intron 30.0%
!! TCAAAAAGTACTAGACTGTA+AGG - chr1_4:2510110-2510129 None:intergenic 30.0%
TAAAATCAACAGTTCTTCCT+TGG - chr1_4:2510208-2510227 None:intergenic 30.0%
!!! AAGGAAGAACTGTTGATTTT+AGG + chr1_4:2510207-2510226 Msa0143560:CDS 30.0%
! TTTTTACTTCCAGCATTACT+CGG - chr1_4:2510322-2510341 None:intergenic 30.0%
!! TGGAAGTAAAAAAGCATTTC+AGG + chr1_4:2510330-2510349 Msa0143560:CDS 30.0%
!! GATTATATAAGAGCACTTAC+GGG - chr1_4:2510533-2510552 None:intergenic 30.0%
! ACTATGTTTTATCGTTGTGT+AGG + chr1_4:2510634-2510653 Msa0143560:intron 30.0%
! TTCATTCTCATCAATTTTGG+AGG + chr1_4:2511276-2511295 Msa0143560:intron 30.0%
! TCATTCTCATCAATTTTGGA+GGG + chr1_4:2511277-2511296 Msa0143560:intron 30.0%
! TTTTCTTCTTGGTTCAAAAG+AGG + chr1_4:2511360-2511379 Msa0143560:intron 30.0%
TTTCTTCTTGGTTCAAAAGA+GGG + chr1_4:2511361-2511380 Msa0143560:intron 30.0%
TGGCATATCAATAATCGTAT+TGG + chr1_4:2511436-2511455 Msa0143560:intron 30.0%
AAATATATAGGGCATAGTAG+AGG - chr1_4:2511741-2511760 None:intergenic 30.0%
!!! CTAATTTTGGATAACGGATT+TGG - chr1_4:2511968-2511987 None:intergenic 30.0%
CAAATCCGTTATCCAAAATT+AGG + chr1_4:2511966-2511985 Msa0143560:intron 30.0%
AATTAGAGACCAAACCTTAA+CGG + chr1_4:2512013-2512032 Msa0143560:intron 30.0%
!!! TGTTTTTTTCCGTTAAGGTT+TGG - chr1_4:2512025-2512044 None:intergenic 30.0%
!!! TGTCATGTTTTTTTCCGTTA+AGG - chr1_4:2512030-2512049 None:intergenic 30.0%
! ATATGGTTTGAATTCTAGCT+AGG - chr1_4:2512174-2512193 None:intergenic 30.0%
TTTGGAAACTTTCAAACTAG+TGG - chr1_4:2512360-2512379 Msa0143570:CDS 30.0%
TTATTTCAAATACCTGGTAG+AGG - chr1_4:2512396-2512415 Msa0143570:CDS 30.0%
!! GGTTTGTTATTTCAAATACC+TGG - chr1_4:2512402-2512421 Msa0143570:CDS 30.0%
! GGTATTTGAAATAACAAACC+AGG + chr1_4:2512402-2512421 Msa0143560:intron 30.0%
AGAATTAATATGGCAGATTG+GGG - chr1_4:2512468-2512487 None:intergenic 30.0%
GAAGAATTAATATGGCAGAT+TGG - chr1_4:2512470-2512489 None:intergenic 30.0%
AATGGGACATAAAAAGGAAA+TGG + chr1_4:2512575-2512594 Msa0143560:intron 30.0%
ATGGGACATAAAAAGGAAAT+GGG + chr1_4:2512576-2512595 Msa0143560:intron 30.0%
AAAAAGGAAATGGGATAGAA+AGG + chr1_4:2512585-2512604 Msa0143560:intron 30.0%
AGTGAGTAAACTGAATGAAA+TGG - chr1_4:2512830-2512849 None:intergenic 30.0%
! AAAGTAACCAAATAAGTTGG+AGG - chr1_4:2512884-2512903 None:intergenic 30.0%
TTAAATATCACTCTTTGTGG+TGG + chr1_4:2512985-2513004 Msa0143560:intron 30.0%
! GATGGTGTCAATTATATGTA+CGG + chr1_4:2513048-2513067 Msa0143560:intron 30.0%
CGATACCCAAACATAATAAA+GGG - chr1_4:2513095-2513114 None:intergenic 30.0%
TCGATACCCAAACATAATAA+AGG - chr1_4:2513096-2513115 None:intergenic 30.0%
TGACTGACTGTTTATAATAG+GGG + chr1_4:2513144-2513163 Msa0143560:intron 30.0%
! ACATGAGAGAGTTTTACTTA+AGG - chr1_4:2513264-2513283 None:intergenic 30.0%
TTTATTGTGTAAACGACACA+TGG - chr1_4:2514337-2514356 None:intergenic 30.0%
!!! TGTTTTAACTCGCTTAAACT+TGG - chr1_4:2514831-2514850 None:intergenic 30.0%
ATAATTTCCCCAGGAAAAAA+AGG - chr1_4:2514913-2514932 None:intergenic 30.0%
AAAAATGTTTGGGAAAGTCT+GGG - chr1_4:2514959-2514978 None:intergenic 30.0%
TAAAAATGTTTGGGAAAGTC+TGG - chr1_4:2514960-2514979 None:intergenic 30.0%
TACTTAGATAAAACGAGTTG+AGG + chr1_4:2515214-2515233 Msa0143560:intron 30.0%
CTTATTTGTACTTGTATGCA+AGG - chr1_4:2515257-2515276 None:intergenic 30.0%
GACAACTTTATCTTATGAGT+TGG + chr1_4:2515287-2515306 Msa0143560:intron 30.0%
AGCAAAAATTTGACAGAAGA+TGG - chr1_4:2515384-2515403 None:intergenic 30.0%
TAGTTCAATTCTTATTGGCA+AGG + chr1_4:2515671-2515690 Msa0143560:intron 30.0%
! TGTCTTTTCTTCATATGAGT+GGG - chr1_4:2515796-2515815 None:intergenic 30.0%
! TTGTCTTTTCTTCATATGAG+TGG - chr1_4:2515797-2515816 None:intergenic 30.0%
! CTCTTACATAATTTTCTCAC+TGG - chr1_4:2515877-2515896 None:intergenic 30.0%
TTTCTGTATTCGAAAGATCA+AGG + chr1_4:2516070-2516089 Msa0143560:intron 30.0%
ACATATAGTCTTCTAGTAGT+AGG + chr1_4:2516159-2516178 Msa0143560:intron 30.0%
GTGAGTGAAAGACTATTTAT+TGG - chr1_4:2516253-2516272 None:intergenic 30.0%
! ACTTTTGTCTTTGCAATCAA+AGG + chr1_4:2516317-2516336 Msa0143560:intron 30.0%
TAGGCAATATATCAGATAAG+TGG - chr1_4:2516387-2516406 None:intergenic 30.0%
GATACACAAAACCCTAAAAT+AGG - chr1_4:2516406-2516425 None:intergenic 30.0%
AACTTATACATACCGGTATT+AGG + chr1_4:2516612-2516631 Msa0143560:intron 30.0%
TTCTTCATGATACCTAATAC+CGG - chr1_4:2516627-2516646 None:intergenic 30.0%
TTCAGTGAAACTATATGTGT+TGG - chr1_4:2516745-2516764 None:intergenic 30.0%
ATTACATGAATCGTTAATCG+GGG - chr1_4:2516913-2516932 None:intergenic 30.0%
GATTACATGAATCGTTAATC+GGG - chr1_4:2516914-2516933 None:intergenic 30.0%
GCTTGTGATAAGGAAAAAAA+AGG - chr1_4:2516942-2516961 None:intergenic 30.0%
!! AAGATTTTAAAAAACGGTCG+CGG + chr1_4:2516962-2516981 Msa0143560:intron 30.0%
CAGAACCATAATCATAACAA+AGG + chr1_4:2517337-2517356 Msa0143560:intron 30.0%
! TAGAGGAGTTAGATTAGTTA+TGG - chr1_4:2517373-2517392 None:intergenic 30.0%
GTTTGTGATTGTGATTATGT+TGG - chr1_4:2517420-2517439 None:intergenic 30.0%
TCTTTGTTACCCAAATTAAG+AGG + chr1_4:2517502-2517521 Msa0143560:intron 30.0%
TCAACTCAACCTCTTAATTT+GGG - chr1_4:2517514-2517533 None:intergenic 30.0%
GTGATCAAGGTTTCAAAAAA+CGG - chr1_4:2517904-2517923 None:intergenic 30.0%
AAATCATGTACTTGTGATCA+AGG - chr1_4:2517917-2517936 None:intergenic 30.0%
!!! GTTTTGTTTGTAAACTTTCG+TGG - chr1_4:2507154-2507173 None:intergenic 30.0%
AGAAAACTAGCAATAAGTTC+AGG + chr1_4:2507196-2507215 Msa0143560:CDS 30.0%
AGCAATTGATCGATTGATAT+TGG + chr1_4:2518547-2518566 Msa0143560:intron 30.0%
GCAATTGATCGATTGATATT+GGG + chr1_4:2518548-2518567 Msa0143560:intron 30.0%
ATTGATATTGGGAATTCTTG+AGG + chr1_4:2518559-2518578 Msa0143560:intron 30.0%
AAAATCTTCGCAGTAAAGAA+GGG + chr1_4:2507569-2507588 Msa0143560:intron 30.0%
TGACGTTAGATTATTTGCTT+TGG + chr1_4:2518925-2518944 Msa0143560:CDS 30.0%
ACAATTTGAAGAAAGGTTGA+AGG + chr1_4:2507906-2507925 Msa0143560:CDS 30.0%
GATGAAATTCATCTTGTTCT+CGG + chr1_4:2507979-2507998 Msa0143560:CDS 30.0%
CAACAACACTTGATGAATAT+AGG + chr1_4:2508085-2508104 Msa0143560:CDS 30.0%
TAATCCACGAAGAATACTAA+TGG - chr1_4:2519266-2519285 None:intergenic 30.0%
! AATGTGGATGGTTTTTATTG+TGG + chr1_4:2519674-2519693 Msa0143560:intron 30.0%
ACTAAATCAATTGCCTTATC+CGG - chr1_4:2508665-2508684 None:intergenic 30.0%
CTAACCAAGAATGGATAATA+TGG + chr1_4:2520054-2520073 Msa0143560:intron 30.0%
GTAAAGTAAAAAATGAGTGG+TGG + chr1_4:2520076-2520095 Msa0143560:intron 30.0%
!! GAGAATAATGGATGTTACAA+AGG - chr1_4:2509047-2509066 None:intergenic 30.0%
! CTAATTATTGATGACATTGC+AGG + chr1_4:2520161-2520180 Msa0143560:intron 30.0%
GGAATACATGGAAAAATTCT+CGG + chr1_4:2520767-2520786 Msa0143560:CDS 30.0%
!! CATTTAATTTGTTTGGTCCA+TGG + chr1_4:2520884-2520903 Msa0143560:intron 30.0%
! AAATTTGTAGCTCTTTTCCA+TGG - chr1_4:2509817-2509836 None:intergenic 30.0%
ATGGAAAAGAGCTACAAATT+TGG + chr1_4:2509816-2509835 Msa0143560:intron 30.0%
! TTTAACCGGCATTTGAAATT+TGG + chr1_4:2520974-2520993 Msa0143560:intron 30.0%
! TGATTGTGAAATGAGTTTTC+AGG + chr1_4:2521103-2521122 Msa0143560:intron 30.0%
!! TCAAAAAGTACTAGACTGTA+AGG - chr1_4:2510110-2510129 None:intergenic 30.0%
!! TACTTTTTGATGAAGTTGAG+AGG + chr1_4:2521190-2521209 Msa0143560:CDS 30.0%
! ACTTTTTGATGAAGTTGAGA+GGG + chr1_4:2521191-2521210 Msa0143560:CDS 30.0%
ATTATCATGACTTCAAACCT+TGG + chr1_4:2521309-2521328 Msa0143560:CDS 30.0%
! TTTTTACTTCCAGCATTACT+CGG - chr1_4:2510322-2510341 None:intergenic 30.0%
!! TGGAAGTAAAAAAGCATTTC+AGG + chr1_4:2510330-2510349 Msa0143560:CDS 30.0%
!! GATTATATAAGAGCACTTAC+AGG - chr1_4:2510533-2510552 None:intergenic 30.0%
AGCTATCTATGATGCTTATA+AGG + chr1_4:2521778-2521797 Msa0143560:CDS 30.0%
GCTATCTATGATGCTTATAA+GGG + chr1_4:2521779-2521798 Msa0143560:CDS 30.0%
AAGTCATTCTCTCAAAAACT+TGG - chr1_4:2522024-2522043 None:intergenic 30.0%
!! AGTTTTTGAGAGAATGACTT+AGG + chr1_4:2522024-2522043 Msa0143560:intron 30.0%
TAGTATAGTCCTTGAATGTA+TGG + chr1_4:2522051-2522070 Msa0143560:intron 30.0%
TTGCAATTTCCATACATTCA+AGG - chr1_4:2522063-2522082 None:intergenic 30.0%
! GAAATTGCAAACATGCTTTT+TGG + chr1_4:2522073-2522092 Msa0143560:intron 30.0%
!!! CTGTTTGGTTTTTGTTCATT+CGG + chr1_4:2522281-2522300 Msa0143560:intron 30.0%
! TTCATTCTCATCAATTTTGG+AGG + chr1_4:2511276-2511295 Msa0143560:intron 30.0%
! TCATTCTCATCAATTTTGGA+GGG + chr1_4:2511277-2511296 Msa0143560:intron 30.0%
CAGAAATTAAAGTGGATGCA+AGG - chr1_4:2507246-2507265 None:intergenic 35.0%
TTCCAAGCAATTTCCAATGT+CGG + chr1_4:2507283-2507302 Msa0143560:CDS 35.0%
!! TTGATAATGGAAGAGCTTTC+TGG - chr1_4:2507397-2507416 None:intergenic 35.0%
!! TGCTTCTAGGGTTAAATTAG+AGG + chr1_4:2507543-2507562 Msa0143560:intron 35.0%
GAAAATCTTCGCAGTAAAGA+AGG + chr1_4:2507568-2507587 Msa0143560:intron 35.0%
GAAAACTTATGGTAGAGACT+TGG + chr1_4:2507636-2507655 Msa0143560:intron 35.0%
! TTGTGAGGATTTTGTCAAGA+AGG + chr1_4:2507716-2507735 Msa0143560:intron 35.0%
GTAAAACAGCTGTTGTTGAA+GGG + chr1_4:2507779-2507798 Msa0143560:intron 35.0%
TTGGCTAAGAGAATAGTTAG+AGG + chr1_4:2507802-2507821 Msa0143560:intron 35.0%
ATAGGGGACAATTTGAAGAA+AGG + chr1_4:2507899-2507918 Msa0143560:CDS 35.0%
AAAAGGATGCTGCATTTGAA+AGG + chr1_4:2508118-2508137 Msa0143560:CDS 35.0%
ATTTGAAAGGAGGTTTCAAC+AGG + chr1_4:2508131-2508150 Msa0143560:CDS 35.0%
CACAATCTTAAAAGGAATGG+AGG + chr1_4:2508551-2508570 Msa0143560:intron 35.0%
! AATGTGGATGGTTTTTGTTG+TGG + chr1_4:2508590-2508609 Msa0143560:intron 35.0%
!! TTGTTGTGGTTTTGCTAACA+TGG + chr1_4:2508604-2508623 Msa0143560:intron 35.0%
AGGAAATTGACAACCTTGAA+AGG + chr1_4:2508732-2508751 Msa0143560:CDS 35.0%
TTGCTATACTTCATCTTCAG+AGG - chr1_4:2509138-2509157 None:intergenic 35.0%
AGTATAGCAAAGAGAAAGAG+AGG + chr1_4:2509148-2509167 Msa0143560:CDS 35.0%
AGATTGCATAGTAGAGTTGT+GGG + chr1_4:2509468-2509487 Msa0143560:CDS 35.0%
! AAGTTCTGTTTTACCGAAAC+CGG - chr1_4:2509598-2509617 None:intergenic 35.0%
TACTCGGTATCAAGATTGAT+CGG + chr1_4:2509696-2509715 Msa0143560:CDS 35.0%
AATACAATATCTTACCCTGG+TGG - chr1_4:2509726-2509745 None:intergenic 35.0%
ATTATCATGACCTCAAACCT+CGG + chr1_4:2510239-2510258 Msa0143560:CDS 35.0%
GCAAGTATATAATCTAGTGC+TGG - chr1_4:2510497-2510516 None:intergenic 35.0%
TTTATCGTTGTGTAGGTGTA+TGG + chr1_4:2510641-2510660 Msa0143560:intron 35.0%
GCTGTCTATGATGCTTATAA+AGG + chr1_4:2510709-2510728 Msa0143560:CDS 35.0%
TATACCAAATCACTTCCCTT+TGG - chr1_4:2510776-2510795 None:intergenic 35.0%
GAAAATGGATATGAGGTCAT+TGG + chr1_4:2510890-2510909 Msa0143560:intron 35.0%
AGTTTGAGAGTGAATGTTTG+TGG + chr1_4:2510954-2510973 Msa0143560:intron 35.0%
AATTTATGTTTGGGGGTTTG+TGG - chr1_4:2511659-2511678 None:intergenic 35.0%
GTCGTGAAATTTATGTTTGG+GGG - chr1_4:2511666-2511685 None:intergenic 35.0%
GGTCGTGAAATTTATGTTTG+GGG - chr1_4:2511667-2511686 None:intergenic 35.0%
GGGTCGTGAAATTTATGTTT+GGG - chr1_4:2511668-2511687 None:intergenic 35.0%
AGGGTCGTGAAATTTATGTT+TGG - chr1_4:2511669-2511688 None:intergenic 35.0%
ATCCAAAGGAAAAACAACGA+GGG - chr1_4:2511688-2511707 None:intergenic 35.0%
! TGTGGCCTAATTTTGGATAA+CGG - chr1_4:2511974-2511993 None:intergenic 35.0%
! TATATGGTGTGGCCTAATTT+TGG - chr1_4:2511981-2512000 None:intergenic 35.0%
ATTGGAATTCACATCTATGC+TGG - chr1_4:2512276-2512295 Msa0143570:CDS 35.0%
TGCATCTTCATGTTAGCAAT+TGG - chr1_4:2512294-2512313 Msa0143570:CDS 35.0%
AAAGAAACTTCGTCACGATA+AGG + chr1_4:2512729-2512748 Msa0143560:intron 35.0%
TCACTCTACAGTTCATTTCA+AGG + chr1_4:2512845-2512864 Msa0143560:intron 35.0%
AATCCTTCCTCCAACTTATT+TGG + chr1_4:2512874-2512893 Msa0143560:intron 35.0%
! TAACCAAATAAGTTGGAGGA+AGG - chr1_4:2512880-2512899 None:intergenic 35.0%
! TTGGTTACTTTGTACATGGT+TGG + chr1_4:2512893-2512912 Msa0143560:intron 35.0%
! TACTTTGTACATGGTTGGTT+TGG + chr1_4:2512898-2512917 Msa0143560:intron 35.0%
TTCTACTAGTTGTTCCATGT+TGG - chr1_4:2512961-2512980 None:intergenic 35.0%
TTATGTACGGTACTCAAAGA+TGG + chr1_4:2513030-2513049 Msa0143560:intron 35.0%
ATATGTACGGTACTCAAAGA+TGG + chr1_4:2513061-2513080 Msa0143560:intron 35.0%
TCGGACCCTTTATTATGTTT+GGG + chr1_4:2513087-2513106 Msa0143560:intron 35.0%
CGTTAGTGCAATAAAAAGAG+TGG - chr1_4:2513379-2513398 None:intergenic 35.0%
TCATCCCAAAAGTGATGAAA+GGG + chr1_4:2513810-2513829 Msa0143560:intron 35.0%
TAGGAGCTAAACTCACATTA+TGG - chr1_4:2513884-2513903 None:intergenic 35.0%
TATCATGTGCAAATTTGCAC+AGG - chr1_4:2513929-2513948 None:intergenic 35.0%
TGCAAATGACTCGCATATTA+TGG - chr1_4:2514613-2514632 None:intergenic 35.0%
!!! AAGGCCTTTCTTTTTTGGAA+AGG - chr1_4:2514894-2514913 None:intergenic 35.0%
!!! AAAGAAAGGCCTTTTTTTCC+TGG + chr1_4:2514901-2514920 Msa0143560:intron 35.0%
!!! AAGAAAGGCCTTTTTTTCCT+GGG + chr1_4:2514902-2514921 Msa0143560:intron 35.0%
GGTCATAAAATAATTTCCCC+AGG - chr1_4:2514922-2514941 None:intergenic 35.0%
GTCTGGGCTATAAAAGAAAT+AGG - chr1_4:2514943-2514962 None:intergenic 35.0%
GAAACCTATAAAGTCCCAAA+CGG + chr1_4:2515033-2515052 Msa0143560:intron 35.0%
!! CTTTACAAGTCAGTTTTGTG+TGG + chr1_4:2515464-2515483 Msa0143560:intron 35.0%
!! TTTATTTTCTAAGGGAGACC+AGG - chr1_4:2516019-2516038 None:intergenic 35.0%
AGTAGTAGGAAACGAAAAGA+CGG + chr1_4:2516173-2516192 Msa0143560:intron 35.0%
GCAGAAATAGAATGGAGTTT+AGG - chr1_4:2516224-2516243 None:intergenic 35.0%
GGAAAGAAGCAGAAATAGAA+TGG - chr1_4:2516232-2516251 None:intergenic 35.0%
ATATATCAGATAAGTGGCGT+CGG - chr1_4:2516381-2516400 None:intergenic 35.0%
!! AACTTTTAGGTCTACGAACA+CGG + chr1_4:2516554-2516573 Msa0143560:intron 35.0%
GAGTATTCACCTATTAAGCA+CGG + chr1_4:2516655-2516674 Msa0143560:intron 35.0%
! ATTGGCAAGTTTATGATGGA+CGG + chr1_4:2517201-2517220 Msa0143560:intron 35.0%
CTCAACTCAACCTCTTAATT+TGG - chr1_4:2517515-2517534 None:intergenic 35.0%
GTTTGTTCTTCATTCACATC+CGG - chr1_4:2517674-2517693 None:intergenic 35.0%
CAGAAAATTAGAGAAGGAGA+AGG - chr1_4:2517737-2517756 None:intergenic 35.0%
!!! TTTTTTTCCTCAGCGTGAAA+AGG + chr1_4:2517816-2517835 Msa0143560:intron 35.0%
!!! TTTTTTCCTCAGCGTGAAAA+GGG + chr1_4:2517817-2517836 Msa0143560:intron 35.0%
AAAAGGGACAAAAACGGTAA+CGG + chr1_4:2517833-2517852 Msa0143560:intron 35.0%
TTTGTTGGGATTAAAGAGTG+TGG - chr1_4:2518023-2518042 None:intergenic 35.0%
CAGAAATTAAAGTGGATGCA+AGG - chr1_4:2507246-2507265 None:intergenic 35.0%
TTCCAAGCAATTTCCAATGT+CGG + chr1_4:2507283-2507302 Msa0143560:CDS 35.0%
!! TTGATAATGGAAGAGCTTTC+TGG - chr1_4:2507397-2507416 None:intergenic 35.0%
!! TGCTTCTAGGGTTAAATTAG+AGG + chr1_4:2507543-2507562 Msa0143560:intron 35.0%
GAAAATCTTCGCAGTAAAGA+AGG + chr1_4:2507568-2507587 Msa0143560:intron 35.0%
GAAAACTTATGGTAGAGACT+TGG + chr1_4:2507636-2507655 Msa0143560:intron 35.0%
ACGTGATGAAGAGATAAGAA+GGG + chr1_4:2518772-2518791 Msa0143560:intron 35.0%
! TTGTGAGGATTTTGTCAAGA+AGG + chr1_4:2507716-2507735 Msa0143560:intron 35.0%
GTAAAACAGCTGTTGTTGAA+GGG + chr1_4:2507779-2507798 Msa0143560:intron 35.0%
ATAGGGGACAATTTGAAGAA+AGG + chr1_4:2507899-2507918 Msa0143560:CDS 35.0%
AAAAGGATGCTGCATTTGAA+AGG + chr1_4:2508118-2508137 Msa0143560:CDS 35.0%
ATTTGAAAGGAGGTTTCAAC+AGG + chr1_4:2508131-2508150 Msa0143560:CDS 35.0%
CGAAGAATACTAATGGTATC+AGG - chr1_4:2519259-2519278 None:intergenic 35.0%
GATACCATTAGTATTCTTCG+TGG + chr1_4:2519259-2519278 Msa0143560:CDS 35.0%
ACAGAAGTTAAAAGGAATGG+AGG + chr1_4:2519635-2519654 Msa0143560:intron 35.0%
CAGAAGTTAAAAGGAATGGA+GGG + chr1_4:2519636-2519655 Msa0143560:intron 35.0%
AGGAAATTGACAACCTTGAA+AGG + chr1_4:2508732-2508751 Msa0143560:CDS 35.0%
! GTTGCATTCTTTTCCTTTCA+AGG - chr1_4:2519834-2519853 None:intergenic 35.0%
TGAAAGGAAAAGAATGCAAC+TGG + chr1_4:2519834-2519853 Msa0143560:CDS 35.0%
TTGCTATACTTCATCTTCAG+AGG - chr1_4:2509138-2509157 None:intergenic 35.0%
AGTATAGCAAAGAGAAAGAG+AGG + chr1_4:2509148-2509167 Msa0143560:CDS 35.0%
! AAAGAAAGATTGGTTGGACT+TGG + chr1_4:2520528-2520547 Msa0143560:CDS 35.0%
AATGGTTAGACTTGACATGT+CGG + chr1_4:2520746-2520765 Msa0143560:CDS 35.0%
TTCTCGGTATCAAGATTGAT+TGG + chr1_4:2520783-2520802 Msa0143560:CDS 35.0%
AATACAATATCTTACCCTGG+TGG - chr1_4:2509726-2509745 None:intergenic 35.0%
TAAAATCCACAGTTCTTCCT+TGG - chr1_4:2521278-2521297 None:intergenic 35.0%
! AAGGAAGAACTGTGGATTTT+AGG + chr1_4:2521277-2521296 Msa0143560:CDS 35.0%
GCAAGTATATAATCTAGTGC+TGG - chr1_4:2510497-2510516 None:intergenic 35.0%
! ACTATGTTTTATCGTTGTGC+AGG + chr1_4:2521704-2521723 Msa0143560:intron 35.0%
TATACCAAATCACTTCCCTT+TGG - chr1_4:2510776-2510795 None:intergenic 35.0%
! CCATTTTCACCAACAGTTTT+TGG - chr1_4:2521948-2521967 None:intergenic 35.0%
! CCAAAAACTGTTGGTGAAAA+TGG + chr1_4:2521945-2521964 Msa0143560:CDS 35.0%
! TGTTGGTGAAAATGGATATG+AGG + chr1_4:2521953-2521972 Msa0143560:CDS 35.0%
GAAAATGGATATGAGGTCAT+TGG + chr1_4:2510890-2510909 Msa0143560:intron 35.0%
!! ATGCTTTTTGGTCGACAAAA+TGG + chr1_4:2522085-2522104 Msa0143560:intron 35.0%
CGAATGAACAAAAACCAAAC+AGG - chr1_4:2522283-2522302 None:intergenic 35.0%
TAAAGTGGATGCAAGGTGTA+CGG - chr1_4:2507239-2507258 None:intergenic 40.0%
! CAAAGTCATTGAAAGAGCAC+AGG + chr1_4:2507414-2507433 Msa0143560:CDS 40.0%
GGGAAACTTGATCCTGTTAT+TGG + chr1_4:2507670-2507689 Msa0143560:intron 40.0%
ACGCGATGAAGAGATAAGAA+GGG + chr1_4:2507693-2507712 Msa0143560:intron 40.0%
AAGAGATAAGAAGGGTTGTG+AGG + chr1_4:2507701-2507720 Msa0143560:intron 40.0%
GGTAAAACAGCTGTTGTTGA+AGG + chr1_4:2507778-2507797 Msa0143560:intron 40.0%
!!! GAAGGCAGTTTTGAAAGAAG+TGG + chr1_4:2507924-2507943 Msa0143560:CDS 40.0%
AAAGAAGTGGAAGATGCTGA+AGG + chr1_4:2507937-2507956 Msa0143560:CDS 40.0%
AAGAAGTGGAAGATGCTGAA+GGG + chr1_4:2507938-2507957 Msa0143560:CDS 40.0%
CGGAGAATACTAATGGTATC+AGG - chr1_4:2508180-2508199 None:intergenic 40.0%
GATACCATTAGTATTCTCCG+TGG + chr1_4:2508180-2508199 Msa0143560:CDS 40.0%
TAGTCCACGGAGAATACTAA+TGG - chr1_4:2508187-2508206 None:intergenic 40.0%
GAGAAATATGAGGGTCATCA+TGG + chr1_4:2508210-2508229 Msa0143560:CDS 40.0%
ATGTCTAGTCGGTACATAAC+TGG + chr1_4:2508273-2508292 Msa0143560:intron 40.0%
! GGCAATTGATTTAGTTGACG+AGG + chr1_4:2508670-2508689 Msa0143560:CDS 40.0%
TCAAGGTTGTCAATTTCCTC+TGG - chr1_4:2508731-2508750 None:intergenic 40.0%
GTTGCATTCTCTTCCTTTCA+AGG - chr1_4:2508748-2508767 None:intergenic 40.0%
TGAAAGGAAGAGAATGCAAC+TGG + chr1_4:2508748-2508767 Msa0143560:CDS 40.0%
TCGTCTTGTAGATGTAAGTG+TGG + chr1_4:2508820-2508839 Msa0143560:intron 40.0%
TATTGATGTCATTGCAGGTG+CGG + chr1_4:2509079-2509098 Msa0143560:intron 40.0%
CTTCAATTGCACCATATCGT+AGG - chr1_4:2509269-2509288 None:intergenic 40.0%
ACGATATGGTGCAATTGAAG+AGG + chr1_4:2509269-2509288 Msa0143560:CDS 40.0%
ATATGGTGCAATTGAAGAGG+TGG + chr1_4:2509272-2509291 Msa0143560:CDS 40.0%
! AATCTTGAAGGTAGCACTGA+TGG + chr1_4:2509309-2509328 Msa0143560:CDS 40.0%
!! ATCTTGAAGGTAGCACTGAT+GGG + chr1_4:2509310-2509329 Msa0143560:CDS 40.0%
ACAACCTCAGCTATTTGATC+TGG - chr1_4:2509375-2509394 None:intergenic 40.0%
TAAACGAGTCACTGGTATAC+CGG - chr1_4:2509409-2509428 None:intergenic 40.0%
! AAAGAAAGGTTGGTTGGACT+TGG + chr1_4:2509441-2509460 Msa0143560:CDS 40.0%
CAGATTGCATAGTAGAGTTG+TGG + chr1_4:2509467-2509486 Msa0143560:CDS 40.0%
!! CGGTAAAACAGAACTTGCTA+AGG + chr1_4:2509602-2509621 Msa0143560:CDS 40.0%
GATGGTTAGACTTGACATGT+CGG + chr1_4:2509659-2509678 Msa0143560:CDS 40.0%
ACTTGACATGTCGGAATACA+TGG + chr1_4:2509668-2509687 Msa0143560:CDS 40.0%
AGGTATATTGGACATGACGA+AGG + chr1_4:2510053-2510072 Msa0143560:intron 40.0%
TATATTGGACATGACGAAGG+TGG + chr1_4:2510056-2510075 Msa0143560:CDS 40.0%
GACGATGGAAGATTAACTGA+TGG + chr1_4:2510182-2510201 Msa0143560:CDS 40.0%
AAGTCCACTTATGAGATGCT+CGG - chr1_4:2510267-2510286 None:intergenic 40.0%
! CATCTCATAAGTGGACTTTC+AGG + chr1_4:2510269-2510288 Msa0143560:CDS 40.0%
TCAGGCCAGAATTGTTGAAT+AGG + chr1_4:2510348-2510367 Msa0143560:CDS 40.0%
TCCAGCCTATTCAACAATTC+TGG - chr1_4:2510356-2510375 None:intergenic 40.0%
ATCAATTGCTCGTGAGATAG+AGG - chr1_4:2510398-2510417 None:intergenic 40.0%
ATCTCACGAGCAATTGATGA+AGG + chr1_4:2510400-2510419 Msa0143560:CDS 40.0%
AGCAATTGATGAAGGTTGCA+AGG + chr1_4:2510408-2510427 Msa0143560:CDS 40.0%
! ATGGTGCTAGACCAATTAGA+AGG + chr1_4:2510660-2510679 Msa0143560:CDS 40.0%
TTCTCAAGCCACCTTCTAAT+TGG - chr1_4:2510674-2510693 None:intergenic 40.0%
AAGGTGGCTTGAGAAAAATG+TGG + chr1_4:2510679-2510698 Msa0143560:CDS 40.0%
! ACAACTGTATGCATTGATGC+TGG + chr1_4:2510749-2510768 Msa0143560:CDS 40.0%
!! AAGTGATTTGGTATACCGTG+TGG + chr1_4:2510781-2510800 Msa0143560:CDS 40.0%
GTATACCGTGTGGAAAAGAA+TGG + chr1_4:2510791-2510810 Msa0143560:CDS 40.0%
CCAAATGGACCAAAAACTGT+CGG + chr1_4:2510866-2510885 Msa0143560:CDS 40.0%
! CCATTTTCACCGACAGTTTT+TGG - chr1_4:2510878-2510897 None:intergenic 40.0%
CCAAAAACTGTCGGTGAAAA+TGG + chr1_4:2510875-2510894 Msa0143560:CDS 40.0%
TGTCGGTGAAAATGGATATG+AGG + chr1_4:2510883-2510902 Msa0143560:CDS 40.0%
!! GGTCATTGGTGATGATGAAA+TGG + chr1_4:2510904-2510923 Msa0143560:intron 40.0%
TCGCAATTTCGATACATTCG+AGG - chr1_4:2510995-2511014 None:intergenic 40.0%
GATCCAAAGGAAAAACAACG+AGG - chr1_4:2511689-2511708 None:intergenic 40.0%
GAAGATGAGTCAAGATCCAA+AGG - chr1_4:2511702-2511721 None:intergenic 40.0%
AATAACAGGAGGACGAAGTT+AGG + chr1_4:2511809-2511828 Msa0143560:intron 40.0%
TTCCGCACGTCATGAAATTA+GGG - chr1_4:2512058-2512077 None:intergenic 40.0%
TTTCCGCACGTCATGAAATT+AGG - chr1_4:2512059-2512078 None:intergenic 40.0%
AGAGGAAGGTTTGTAGAGTT+TGG - chr1_4:2512378-2512397 Msa0143570:CDS 40.0%
TTCAAATACCTGGTAGAGGA+AGG - chr1_4:2512392-2512411 Msa0143570:CDS 40.0%
AGCACCACTGACACAAAAAT+TGG + chr1_4:2512441-2512460 Msa0143560:intron 40.0%
GCTTGTCTCTTCTTCAAAGT+TGG - chr1_4:2512613-2512632 None:intergenic 40.0%
! GAGACAAGCAATTGATGACA+TGG + chr1_4:2512624-2512643 Msa0143560:intron 40.0%
GTGGTGGCTTAAAGCTAATA+AGG + chr1_4:2513001-2513020 Msa0143560:intron 40.0%
GTCGGACCCTTTATTATGTT+TGG + chr1_4:2513086-2513105 Msa0143560:intron 40.0%
CTGACTGTTTATAATAGGGG+TGG + chr1_4:2513147-2513166 Msa0143560:intron 40.0%
GTCATCCCAAAAGTGATGAA+AGG + chr1_4:2513809-2513828 Msa0143560:intron 40.0%
CATCCCAAAAGTGATGAAAG+GGG + chr1_4:2513811-2513830 Msa0143560:intron 40.0%
!! CTACCCCTTTCATCACTTTT+GGG - chr1_4:2513817-2513836 None:intergenic 40.0%
! ACTACCCCTTTCATCACTTT+TGG - chr1_4:2513818-2513837 None:intergenic 40.0%
GTGCAAACTTGCACATGATA+AGG - chr1_4:2514061-2514080 None:intergenic 40.0%
TCACTCACAATTCGTAAGCT+CGG + chr1_4:2514728-2514747 Msa0143560:intron 40.0%
!!! AGAAAGGCCTTTTTTTCCTG+GGG + chr1_4:2514903-2514922 Msa0143560:intron 40.0%
TCTCACTGGAAATTGGAAAG+AGG - chr1_4:2515863-2515882 None:intergenic 40.0%
GTAGTAGGAAACGAAAAGAC+GGG + chr1_4:2516174-2516193 Msa0143560:intron 40.0%
CCTTGAAAATCAACGGCTAA+AGG - chr1_4:2516527-2516546 None:intergenic 40.0%
!!! CCTTTAGCCGTTGATTTTCA+AGG + chr1_4:2516524-2516543 Msa0143560:intron 40.0%
!! ACTTTTAGGTCTACGAACAC+GGG + chr1_4:2516555-2516574 Msa0143560:intron 40.0%
!! TGTTGGTGTCATGTCAAACA+CGG - chr1_4:2516728-2516747 None:intergenic 40.0%
ACGAATACAGACATGAACAC+CGG - chr1_4:2516824-2516843 None:intergenic 40.0%
AGACGTTGCGATACAAGTAA+CGG + chr1_4:2517018-2517037 Msa0143560:intron 40.0%
GATACAAGTAACGGTCTTTG+CGG + chr1_4:2517027-2517046 Msa0143560:intron 40.0%
ACCTCTTGAAGAAGCAGATA+TGG + chr1_4:2517566-2517585 Msa0143560:intron 40.0%
TCCATATCTGCTTCTTCAAG+AGG - chr1_4:2517570-2517589 None:intergenic 40.0%
TGAAGAAGCAGATATGGATC+TGG + chr1_4:2517572-2517591 Msa0143560:intron 40.0%
AAGGAGAAGGAATCTCAGAT+TGG - chr1_4:2517724-2517743 None:intergenic 40.0%
AATTGCCGTTACGAACGTTA+CGG - chr1_4:2517784-2517803 None:intergenic 40.0%
AGCGTGAAAAGGGACAAAAA+CGG + chr1_4:2517827-2517846 Msa0143560:intron 40.0%
!! TTTTGTAACGCCCGTTTTTG+CGG + chr1_4:2517871-2517890 Msa0143560:intron 40.0%
TAAAGTGGATGCAAGGTGTA+CGG - chr1_4:2507239-2507258 None:intergenic 40.0%
! CAAAGTCATTGAAAGAGCAC+AGG + chr1_4:2507414-2507433 Msa0143560:CDS 40.0%
GGGAAACTTGATCCTGTTAT+TGG + chr1_4:2507670-2507689 Msa0143560:intron 40.0%
TCTTCATCACGTCCAATAAC+AGG - chr1_4:2518764-2518783 None:intergenic 40.0%
GACGTGATGAAGAGATAAGA+AGG + chr1_4:2518771-2518790 Msa0143560:intron 40.0%
AAGAGATAAGAAGGGTTGTG+AGG + chr1_4:2507701-2507720 Msa0143560:intron 40.0%
GGTAAAACAGCTGTTGTTGA+AGG + chr1_4:2507778-2507797 Msa0143560:intron 40.0%
CTGGCTAAGAGAATAGTTAG+AGG + chr1_4:2518881-2518900 Msa0143560:intron 40.0%
CTAACGTCAGCAAGATTACT+AGG - chr1_4:2518914-2518933 None:intergenic 40.0%
!!! GAAGGCAGTTTTGAAAGAAG+TGG + chr1_4:2507924-2507943 Msa0143560:CDS 40.0%
AAAGAAGTGGAAGATGCTGA+AGG + chr1_4:2507937-2507956 Msa0143560:CDS 40.0%
AAGAAGTGGAAGATGCTGAA+GGG + chr1_4:2507938-2507957 Msa0143560:CDS 40.0%
GAGAAATATGAGGGTCATCA+TGG + chr1_4:2508210-2508229 Msa0143560:CDS 40.0%
ATGTCTAGTCGGTACATAAC+TGG + chr1_4:2508273-2508292 Msa0143560:intron 40.0%
! GGCAATTGATTTAGTTGACG+AGG + chr1_4:2508670-2508689 Msa0143560:CDS 40.0%
TCAAGGTTGTCAATTTCCTC+AGG - chr1_4:2508731-2508750 None:intergenic 40.0%
GAAAAGAATGCAACTGGAAG+TGG + chr1_4:2519840-2519859 Msa0143560:CDS 40.0%
!! ACTTCATGCTTTGGAGAAAG+AGG + chr1_4:2519864-2519883 Msa0143560:CDS 40.0%
ACGTGCGAATATGAAAGCAA+TGG + chr1_4:2520008-2520027 Msa0143560:intron 40.0%
AGAGAAAGAGAGGATTGATG+AGG + chr1_4:2509158-2509177 Msa0143560:CDS 40.0%
CTTCAATTGCACCATATCGT+AGG - chr1_4:2509269-2509288 None:intergenic 40.0%
ACGATATGGTGCAATTGAAG+AGG + chr1_4:2509269-2509288 Msa0143560:CDS 40.0%
ATATGGTGCAATTGAAGAGG+TGG + chr1_4:2509272-2509291 Msa0143560:CDS 40.0%
! AATCTTGAAGGTAGCACTGA+TGG + chr1_4:2509309-2509328 Msa0143560:CDS 40.0%
!! ATCTTGAAGGTAGCACTGAT+GGG + chr1_4:2509310-2509329 Msa0143560:CDS 40.0%
TTGATGCTGACGGAAATTGT+TGG + chr1_4:2520435-2520454 Msa0143560:CDS 40.0%
ACAACCTCAGCTATTTGATC+TGG - chr1_4:2509375-2509394 None:intergenic 40.0%
TAAACGAGTCACTGGTATAC+CGG - chr1_4:2509409-2509428 None:intergenic 40.0%
AGATTGCACAGTAGAGTTGT+GGG + chr1_4:2520555-2520574 Msa0143560:CDS 40.0%
! AAGTTCTGTTTTACCGACAC+CGG - chr1_4:2520685-2520704 None:intergenic 40.0%
!! CGGTAAAACAGAACTTGCTA+AGG + chr1_4:2509602-2509621 Msa0143560:CDS 40.0%
ACTTGACATGTCGGAATACA+TGG + chr1_4:2509668-2509687 Msa0143560:CDS 40.0%
AGGTATATTGGACATGACGA+AGG + chr1_4:2510053-2510072 Msa0143560:intron 40.0%
TATATTGGACATGACGAAGG+TGG + chr1_4:2510056-2510075 Msa0143560:CDS 40.0%
TGACGAAGGTGGACAATTAA+CGG + chr1_4:2521137-2521156 Msa0143560:CDS 40.0%
CTGCTTCAAGTCTTAGATGA+CGG + chr1_4:2521237-2521256 Msa0143560:CDS 40.0%
TGCTTCAAGTCTTAGATGAC+GGG + chr1_4:2521238-2521257 Msa0143560:CDS 40.0%
AAGTCCACTTATGAGATGCT+CGG - chr1_4:2510267-2510286 None:intergenic 40.0%
! CATCTCATAAGTGGACTTTC+AGG + chr1_4:2510269-2510288 Msa0143560:CDS 40.0%
TCAGGCCAGAATTGTTGAAT+AGG + chr1_4:2510348-2510367 Msa0143560:CDS 40.0%
TCCAGCCTATTCAACAATTC+TGG - chr1_4:2510356-2510375 None:intergenic 40.0%
ATCAATTGCTCGTGAGATAG+AGG - chr1_4:2510398-2510417 None:intergenic 40.0%
ATCTCACGAGCAATTGATGA+AGG + chr1_4:2510400-2510419 Msa0143560:CDS 40.0%
AGCAATTGATGAAGGTTGCA+AGG + chr1_4:2510408-2510427 Msa0143560:CDS 40.0%
TTTATCGTTGTGCAGGTGTA+TGG + chr1_4:2521711-2521730 Msa0143560:intron 40.0%
TTATCGTTGTGCAGGTGTAT+GGG + chr1_4:2521712-2521731 Msa0143560:intron 40.0%
TTCTCAAGCCACCTTCTAAT+TGG - chr1_4:2510674-2510693 None:intergenic 40.0%
! ACAACTGTATGCATTGATGC+TGG + chr1_4:2510749-2510768 Msa0143560:CDS 40.0%
!! AAGTGATTTGGTATACCGTG+TGG + chr1_4:2510781-2510800 Msa0143560:CDS 40.0%
GTATACCGTGTGGAAAAGAA+TGG + chr1_4:2510791-2510810 Msa0143560:CDS 40.0%
!!! CCAACAGTTTTTGGTCCATT+TGG - chr1_4:2521939-2521958 None:intergenic 40.0%
CCAAATGGACCAAAAACTGT+TGG + chr1_4:2510866-2510885 Msa0143560:CDS 40.0%
TTGGGACAGATTTACCTGTT+TGG + chr1_4:2522266-2522285 Msa0143560:intron 40.0%
AAAGTGGATGCAAGGTGTAC+GGG - chr1_4:2507238-2507257 None:intergenic 45.0%
CACCGACATTGGAAATTGCT+TGG - chr1_4:2507288-2507307 None:intergenic 45.0%
CAAGCAATTTCCAATGTCGG+TGG + chr1_4:2507286-2507305 Msa0143560:CDS 45.0%
!! GCAGACTTGTTGACAGAATC+TGG + chr1_4:2507514-2507533 Msa0143560:intron 45.0%
CTTGTTGACAGAATCTGGTG+TGG + chr1_4:2507519-2507538 Msa0143560:intron 45.0%
! AGAGACTTGGTTGAACAAGC+AGG + chr1_4:2507649-2507668 Msa0143560:intron 45.0%
! GAGACTTGGTTGAACAAGCA+GGG + chr1_4:2507650-2507669 Msa0143560:intron 45.0%
TCTTCATCGCGTCCAATAAC+AGG - chr1_4:2507685-2507704 None:intergenic 45.0%
GACGCGATGAAGAGATAAGA+AGG + chr1_4:2507692-2507711 Msa0143560:intron 45.0%
CCTGGCTCACCTATAATAAC+AGG - chr1_4:2507754-2507773 None:intergenic 45.0%
CCTGTTATTATAGGTGAGCC+AGG + chr1_4:2507751-2507770 Msa0143560:intron 45.0%
ATTATAGGTGAGCCAGGTGT+TGG + chr1_4:2507757-2507776 Msa0143560:intron 45.0%
!! ACAGCTGTTTTACCAACACC+TGG - chr1_4:2507772-2507791 None:intergenic 45.0%
AACAGCTGTTGTTGAAGGGT+TGG + chr1_4:2507783-2507802 Msa0143560:intron 45.0%
! TAGTCGCTGGTACTGAGTAT+AGG + chr1_4:2507881-2507900 Msa0143560:CDS 45.0%
! AGTCGCTGGTACTGAGTATA+GGG + chr1_4:2507882-2507901 Msa0143560:CDS 45.0%
! ATTCATCTTGTTCTCGGTGC+CGG + chr1_4:2507985-2508004 Msa0143560:CDS 45.0%
CATTGATCCTTGACATCGAC+CGG - chr1_4:2508007-2508026 None:intergenic 45.0%
TTCAAACCTATGCTTGCTCG+TGG + chr1_4:2508042-2508061 Msa0143560:CDS 45.0%
CGTGGACAACTTAGATGCAT+CGG + chr1_4:2508060-2508079 Msa0143560:CDS 45.0%
AGGATGCTGCATTTGAAAGG+AGG + chr1_4:2508121-2508140 Msa0143560:CDS 45.0%
CTAATGGTATCAGGCACACT+AGG - chr1_4:2508171-2508190 None:intergenic 45.0%
GAGCTGCAACAACAATTGCA+CGG - chr1_4:2508251-2508270 None:intergenic 45.0%
TTGCAGCTCAGATGTCTAGT+CGG + chr1_4:2508262-2508281 Msa0143560:intron 45.0%
GGAAGTAGAACTCCATGCTT+TGG + chr1_4:2508769-2508788 Msa0143560:CDS 45.0%
!! ACTCCATGCTTTGGAGAAAG+AGG + chr1_4:2508778-2508797 Msa0143560:CDS 45.0%
AGGTGAGAACTTGATGCTGA+CGG + chr1_4:2509338-2509357 Msa0143560:CDS 45.0%
TTGATGCTGACGGAAACTGT+TGG + chr1_4:2509348-2509367 Msa0143560:CDS 45.0%
TGGACCAGATCAAATAGCTG+AGG + chr1_4:2509368-2509387 Msa0143560:CDS 45.0%
GGTATACCAGTGACTCGTTT+AGG + chr1_4:2509408-2509427 Msa0143560:CDS 45.0%
! TTTTGGCCTAAACGAGTCAC+TGG - chr1_4:2509417-2509436 None:intergenic 45.0%
AAGGAACCAGTTGGTTGTTG+TGG - chr1_4:2509558-2509577 None:intergenic 45.0%
AGGAATAGGAAGGAACCAGT+TGG - chr1_4:2509567-2509586 None:intergenic 45.0%
! ACTGGTTCCTTCCTATTCCT+TGG + chr1_4:2509567-2509586 Msa0143560:CDS 45.0%
TTCCTATTCCTTGGTCCAAC+CGG + chr1_4:2509576-2509595 Msa0143560:CDS 45.0%
! TCTGTTTTACCGAAACCGGT+TGG - chr1_4:2509594-2509613 None:intergenic 45.0%
GACAATTGACCGAAGCTGTA+AGG + chr1_4:2510078-2510097 Msa0143560:CDS 45.0%
AGGCTTTCTCCTTACAGCTT+CGG - chr1_4:2510090-2510109 None:intergenic 45.0%
CTGCTTCAAGTCTTAGACGA+TGG + chr1_4:2510167-2510186 Msa0143560:CDS 45.0%
GGAAGATTAACTGATGGCCA+AGG + chr1_4:2510188-2510207 Msa0143560:CDS 45.0%
GCCAGAATTGTTGAATAGGC+TGG + chr1_4:2510352-2510371 Msa0143560:CDS 45.0%
GGTTGCAAGGTTGCAAATGA+AGG + chr1_4:2510421-2510440 Msa0143560:CDS 45.0%
TGCTGAGAGAGGAATTGCAT+TGG + chr1_4:2510460-2510479 Msa0143560:CDS 45.0%
GTGCTAGACCAATTAGAAGG+TGG + chr1_4:2510663-2510682 Msa0143560:CDS 45.0%
! ATGCATTGATGCTGGTCCAA+AGG + chr1_4:2510757-2510776 Msa0143560:CDS 45.0%
! TGCATTGATGCTGGTCCAAA+GGG + chr1_4:2510758-2510777 Msa0143560:CDS 45.0%
TGGTCCAAAGGGAAGTGATT+TGG + chr1_4:2510769-2510788 Msa0143560:CDS 45.0%
TACCGTGTGGAAAAGAATGG+AGG + chr1_4:2510794-2510813 Msa0143560:CDS 45.0%
ACCGTGTGGAAAAGAATGGA+GGG + chr1_4:2510795-2510814 Msa0143560:CDS 45.0%
! TCCCTCCATTCTTTTCCACA+CGG - chr1_4:2510799-2510818 None:intergenic 45.0%
GGGATTGTTGATGCTGAAAC+TGG + chr1_4:2510815-2510834 Msa0143560:CDS 45.0%
TGCTGAAACTGGTGTGAAGT+CGG + chr1_4:2510826-2510845 Msa0143560:CDS 45.0%
!!! CCGACAGTTTTTGGTCCATT+TGG - chr1_4:2510869-2510888 None:intergenic 45.0%
!! TTTTGGAGGGTGTAGTTCGT+TGG + chr1_4:2511290-2511309 Msa0143560:intron 45.0%
!!! GACCCTCGTTGTTTTTCCTT+TGG + chr1_4:2511683-2511702 Msa0143560:intron 45.0%
GTCCCTAATTTCATGACGTG+CGG + chr1_4:2512053-2512072 Msa0143560:intron 45.0%
GAGCAAAGTAGAGCATAGCA+TGG + chr1_4:2512319-2512338 Msa0143560:intron 45.0%
GAGCATAGCATGGATGAGTA+TGG + chr1_4:2512329-2512348 Msa0143560:intron 45.0%
TCTACAAACCTTCCTCTACC+AGG + chr1_4:2512381-2512400 Msa0143560:intron 45.0%
CTCTTCATTCTCTTGACTCC+TGG - chr1_4:2512423-2512442 Msa0143570:CDS 45.0%
! GGGACCAATTTTTGTGTCAG+TGG - chr1_4:2512448-2512467 Msa0143570:CDS 45.0%
TGTACGGTACTCAAAGATGG+TGG + chr1_4:2513033-2513052 Msa0143560:intron 45.0%
! TCGTCCGTTTGGGACTTTAT+AGG - chr1_4:2515040-2515059 None:intergenic 45.0%
!!! AACGCTGATTTTGTCGACGT+CGG - chr1_4:2515066-2515085 None:intergenic 45.0%
! CGAGTTGAGGTAAACTGAGT+TGG + chr1_4:2515227-2515246 Msa0143560:intron 45.0%
CGTACGTACTTGAGAATTCC+TGG + chr1_4:2515998-2516017 Msa0143560:intron 45.0%
AGGAAACGAAAAGACGGGAA+CGG + chr1_4:2516179-2516198 Msa0143560:intron 45.0%
GATAAGATGTGTCCTGGTGT+TGG + chr1_4:2516688-2516707 Msa0143560:intron 45.0%
!! GTTGGTGTCATGTCAAACAC+GGG - chr1_4:2516727-2516746 None:intergenic 45.0%
GACGGTGGTGATCAATCAAA+GGG + chr1_4:2517219-2517238 Msa0143560:intron 45.0%
AGCAGATATGGATCTGGTTG+AGG + chr1_4:2517578-2517597 Msa0143560:intron 45.0%
GCAGATATGGATCTGGTTGA+GGG + chr1_4:2517579-2517598 Msa0143560:intron 45.0%
GAACAAAGAAAAGCAGCTGC+CGG + chr1_4:2517652-2517671 Msa0143560:intron 45.0%
! TTTTGTCCCTTTTCACGCTG+AGG - chr1_4:2517826-2517845 None:intergenic 45.0%
CGGGCGTTACAAAACAGTAT+CGG - chr1_4:2517865-2517884 None:intergenic 45.0%
ACGGAACGTTACCGCAAAAA+CGG - chr1_4:2517885-2517904 None:intergenic 45.0%
AAAGTGGATGCAAGGTGTAC+GGG - chr1_4:2507238-2507257 None:intergenic 45.0%
CACCGACATTGGAAATTGCT+TGG - chr1_4:2507288-2507307 None:intergenic 45.0%
CAAGCAATTTCCAATGTCGG+TGG + chr1_4:2507286-2507305 Msa0143560:CDS 45.0%
! CTTTCTGGTACATGTTGTGG+TGG - chr1_4:2518461-2518480 None:intergenic 45.0%
! GAGCTTTCTGGTACATGTTG+TGG - chr1_4:2518464-2518483 None:intergenic 45.0%
!! GCAGACTTGTTGACAGAATC+TGG + chr1_4:2507514-2507533 Msa0143560:intron 45.0%
CTTGTTGACAGAATCTGGTG+TGG + chr1_4:2507519-2507538 Msa0143560:intron 45.0%
! AGAGACTTGGTTGAACAAGC+AGG + chr1_4:2507649-2507668 Msa0143560:intron 45.0%
! GAGACTTGGTTGAACAAGCA+GGG + chr1_4:2507650-2507669 Msa0143560:intron 45.0%
CCTGGCTCACCTATAATAAC+AGG - chr1_4:2507754-2507773 None:intergenic 45.0%
CCTGTTATTATAGGTGAGCC+AGG + chr1_4:2507751-2507770 Msa0143560:intron 45.0%
ATTATAGGTGAGCCAGGTGT+TGG + chr1_4:2507757-2507776 Msa0143560:intron 45.0%
!! ACAGCTGTTTTACCAACACC+TGG - chr1_4:2507772-2507791 None:intergenic 45.0%
TAGTCGCTGGTACTCAGTAT+AGG + chr1_4:2518960-2518979 Msa0143560:CDS 45.0%
AGTCGCTGGTACTCAGTATA+GGG + chr1_4:2518961-2518980 Msa0143560:CDS 45.0%
! ATTCATCTTGTTCTCGGTGC+TGG + chr1_4:2507985-2508004 Msa0143560:CDS 45.0%
TGGTCGATGTCAAGGATCAA+TGG + chr1_4:2519084-2519103 Msa0143560:CDS 45.0%
TTCAAACCTATGCTTGCTCG+TGG + chr1_4:2508042-2508061 Msa0143560:CDS 45.0%
AGGATGCTGCATTTGAAAGG+AGG + chr1_4:2508121-2508140 Msa0143560:CDS 45.0%
CTAATGGTATCAGGCACACT+AGG - chr1_4:2508171-2508190 None:intergenic 45.0%
GAGCTGCAACAACAATTGCA+CGG - chr1_4:2508251-2508270 None:intergenic 45.0%
TTGCAGCTCAGATGTCTAGT+CGG + chr1_4:2508262-2508281 Msa0143560:intron 45.0%
GGAAGTGGAACTTCATGCTT+TGG + chr1_4:2519855-2519874 Msa0143560:CDS 45.0%
!! TCATGCTTTGGAGAAAGAGG+AGG + chr1_4:2519867-2519886 Msa0143560:CDS 45.0%
!! TGGTGGACAATGCTTTTCGT+CGG + chr1_4:2520093-2520112 Msa0143560:intron 45.0%
AGGTGAGAACTTGATGCTGA+CGG + chr1_4:2509338-2509357 Msa0143560:CDS 45.0%
TGGACCAGATCAAATAGCTG+AGG + chr1_4:2509368-2509387 Msa0143560:CDS 45.0%
GGTATACCAGTGACTCGTTT+AGG + chr1_4:2509408-2509427 Msa0143560:CDS 45.0%
! TTTTGGCCTAAACGAGTCAC+TGG - chr1_4:2509417-2509436 None:intergenic 45.0%
CAGATTGCACAGTAGAGTTG+TGG + chr1_4:2520554-2520573 Msa0143560:CDS 45.0%
AAGCAGTTAAAGCTGTCGCT+GGG + chr1_4:2509499-2509518 Msa0143560:CDS 45.0%
AAGGAACCAGTTGGTTGTTG+TGG - chr1_4:2509558-2509577 None:intergenic 45.0%
AGGAATAGGAAGGAACCAGT+TGG - chr1_4:2509567-2509586 None:intergenic 45.0%
! ACTGGTTCCTTCCTATTCCT+TGG + chr1_4:2509567-2509586 Msa0143560:CDS 45.0%
TTCCTATTCCTTGGTCCAAC+CGG + chr1_4:2509576-2509595 Msa0143560:CDS 45.0%
GACAATTAACGGAAGCCGTA+AGG + chr1_4:2521148-2521167 Msa0143560:CDS 45.0%
ACTGTAAGGCCTTCTCCTTA+CGG - chr1_4:2521166-2521185 None:intergenic 45.0%
GCCAGAATTGTTGAATAGGC+TGG + chr1_4:2510352-2510371 Msa0143560:CDS 45.0%
GGTTGCAAGGTTGCAAATGA+AGG + chr1_4:2510421-2510440 Msa0143560:CDS 45.0%
TATCGTTGTGCAGGTGTATG+GGG + chr1_4:2521713-2521732 Msa0143560:intron 45.0%
ATGGGGCTAGACCAATTAGA+AGG + chr1_4:2521730-2521749 Msa0143560:CDS 45.0%
AAGGTGGCTTGAGAAGAATG+TGG + chr1_4:2521749-2521768 Msa0143560:CDS 45.0%
! ATGCATTGATGCTGGTCCAA+AGG + chr1_4:2510757-2510776 Msa0143560:CDS 45.0%
! TGCATTGATGCTGGTCCAAA+GGG + chr1_4:2510758-2510777 Msa0143560:CDS 45.0%
TGGTCCAAAGGGAAGTGATT+TGG + chr1_4:2510769-2510788 Msa0143560:CDS 45.0%
TACCGTGTGGAAAAGAATGG+AGG + chr1_4:2510794-2510813 Msa0143560:CDS 45.0%
ACCGTGTGGAAAAGAATGGA+GGG + chr1_4:2510795-2510814 Msa0143560:CDS 45.0%
! TCCCTCCATTCTTTTCCACA+CGG - chr1_4:2510799-2510818 None:intergenic 45.0%
GGGATTGTTGATGCTGAAAC+TGG + chr1_4:2510815-2510834 Msa0143560:CDS 45.0%
GGTCATTGGCGATGATGAAA+TGG + chr1_4:2521974-2521993 Msa0143560:intron 45.0%
!!! TTTAAGTTTTAATTTTTTTT+GGG + chr1_4:2511186-2511205 Msa0143560:intron 5.0%
!! AATTTAAAAATATATTACAA+TGG - chr1_4:2511536-2511555 None:intergenic 5.0%
!!! TTAAGTTTTTTTTTATTTTT+TGG + chr1_4:2522247-2522266 Msa0143560:intron 5.0%
!!! TAAGTTTTTTTTTATTTTTT+GGG + chr1_4:2522248-2522267 Msa0143560:intron 5.0%
AGATTCGTCACCACCGACAT+TGG - chr1_4:2507299-2507318 None:intergenic 50.0%
! CTTTCTGGTACATGCTGTGG+TGG - chr1_4:2507382-2507401 None:intergenic 50.0%
! GAGCTTTCTGGTACATGCTG+TGG - chr1_4:2507385-2507404 None:intergenic 50.0%
AATCTGGTGTGGCTGCTTCT+AGG + chr1_4:2507530-2507549 Msa0143560:intron 50.0%
ATCTGGTGTGGCTGCTTCTA+GGG + chr1_4:2507531-2507550 Msa0143560:intron 50.0%
! GTCGCTGGTACTGAGTATAG+GGG + chr1_4:2507883-2507902 Msa0143560:CDS 50.0%
AGTGGAAGATGCTGAAGGGA+AGG + chr1_4:2507942-2507961 Msa0143560:CDS 50.0%
CGGTCGATGTCAAGGATCAA+TGG + chr1_4:2508005-2508024 Msa0143560:CDS 50.0%
AGTTGTCCACGAGCAAGCAT+AGG - chr1_4:2508051-2508070 None:intergenic 50.0%
TCAACTTGACAGTCAGCCAG+AGG + chr1_4:2508712-2508731 Msa0143560:CDS 50.0%
CCTCCTCTTTCTCCAAAGCA+TGG - chr1_4:2508784-2508803 None:intergenic 50.0%
!! CCATGCTTTGGAGAAAGAGG+AGG + chr1_4:2508781-2508800 Msa0143560:CDS 50.0%
AGAGCTCCTCTTTGCACTAC+AGG + chr1_4:2509206-2509225 Msa0143560:CDS 50.0%
ATATCGTAGGTCTGCAGCTC+TGG - chr1_4:2509256-2509275 None:intergenic 50.0%
AGAGCTGCAGACCTACGATA+TGG + chr1_4:2509255-2509274 Msa0143560:CDS 50.0%
!! GGTAGCACTGATGGGAACAA+AGG + chr1_4:2509318-2509337 Msa0143560:CDS 50.0%
TAGCTGAGGTTGTAAGCCGA+TGG + chr1_4:2509382-2509401 Msa0143560:CDS 50.0%
TCACTGGTATACCGGTCCAT+CGG - chr1_4:2509401-2509420 None:intergenic 50.0%
! CAGCGACAGCTTTAACTGCT+TGG - chr1_4:2509500-2509519 None:intergenic 50.0%
AGCAGTTAAAGCTGTCGCTG+AGG + chr1_4:2509500-2509519 Msa0143560:CDS 50.0%
GGAAGACCACAACAACCAAC+TGG + chr1_4:2509549-2509568 Msa0143560:CDS 50.0%
GGTTGGACCAAGGAATAGGA+AGG - chr1_4:2509577-2509596 None:intergenic 50.0%
AACCGGTTGGACCAAGGAAT+AGG - chr1_4:2509581-2509600 None:intergenic 50.0%
! TTCCTTGGTCCAACCGGTTT+CGG + chr1_4:2509582-2509601 Msa0143560:CDS 50.0%
! CGGTACTCAAAGATGGTGGT+CGG + chr1_4:2513068-2513087 Msa0143560:intron 50.0%
CTCGCATATTATGGCACGCA+TGG - chr1_4:2514604-2514623 None:intergenic 50.0%
GTCGGACACATAGCAAGAGA+CGG - chr1_4:2516363-2516382 None:intergenic 50.0%
TATTAAGCACGGACACCCCT+CGG + chr1_4:2516666-2516685 Msa0143560:intron 50.0%
CAGGACACATCTTATCCGAG+GGG - chr1_4:2516684-2516703 None:intergenic 50.0%
CCAGGACACATCTTATCCGA+GGG - chr1_4:2516685-2516704 None:intergenic 50.0%
ACCAGGACACATCTTATCCG+AGG - chr1_4:2516686-2516705 None:intergenic 50.0%
CGGACACTAACAGGCTGATA+TGG - chr1_4:2516793-2516812 None:intergenic 50.0%
!! GGCAAGTTTATGATGGACGG+TGG + chr1_4:2517204-2517223 Msa0143560:intron 50.0%
GGACGGTGGTGATCAATCAA+AGG + chr1_4:2517218-2517237 Msa0143560:intron 50.0%
CTTGACTCTTGAGGCACGTA+TGG + chr1_4:2517602-2517621 Msa0143560:intron 50.0%
CTTGAGGCACGTATGGTGAT+TGG + chr1_4:2517609-2517628 Msa0143560:intron 50.0%
CTGTACTTTCACGGCCGTAA+CGG + chr1_4:2517754-2517773 Msa0143560:intron 50.0%
AACGTTACGGAACGCCGTTA+CGG - chr1_4:2517771-2517790 None:intergenic 50.0%
GCGTTCCGTAACGTTCGTAA+CGG + chr1_4:2517776-2517795 Msa0143560:intron 50.0%
CGGAACGTTACCGCAAAAAC+GGG - chr1_4:2517884-2517903 None:intergenic 50.0%
AGATTCGTCACCACCGACAT+TGG - chr1_4:2507299-2507318 None:intergenic 50.0%
TCTGGTACATGTTGTGGTGG+AGG - chr1_4:2518458-2518477 None:intergenic 50.0%
AATCTGGTGTGGCTGCTTCT+AGG + chr1_4:2507530-2507549 Msa0143560:intron 50.0%
ATCTGGTGTGGCTGCTTCTA+GGG + chr1_4:2507531-2507550 Msa0143560:intron 50.0%
AACAGCTGTTGTTGAAGGGC+TGG + chr1_4:2518862-2518881 Msa0143560:intron 50.0%
GTCGCTGGTACTCAGTATAG+GGG + chr1_4:2518962-2518981 Msa0143560:CDS 50.0%
AGTGGAAGATGCTGAAGGGA+AGG + chr1_4:2507942-2507961 Msa0143560:CDS 50.0%
!! TTGTTAAGGGCGTCGTCTTC+CGG + chr1_4:2508643-2508662 Msa0143560:intron 50.0%
TCAACTTGACAGTCAGCCTG+AGG + chr1_4:2519798-2519817 Msa0143560:CDS 50.0%
AGAGCTCCTCTTTGCACTAC+AGG + chr1_4:2509206-2509225 Msa0143560:CDS 50.0%
ATATCGTAGGTCTGCAGCTC+TGG - chr1_4:2509256-2509275 None:intergenic 50.0%
AGAGCTGCAGACCTACGATA+TGG + chr1_4:2509255-2509274 Msa0143560:CDS 50.0%
!! GGTAGCACTGATGGGAACAA+AGG + chr1_4:2509318-2509337 Msa0143560:CDS 50.0%
TAGCTGAGGTTGTAAGCCGA+TGG + chr1_4:2509382-2509401 Msa0143560:CDS 50.0%
TCACTGGTATACCGGTCCAT+CGG - chr1_4:2509401-2509420 None:intergenic 50.0%
! CAGCGACAGCTTTAACTGCT+TGG - chr1_4:2509500-2509519 None:intergenic 50.0%
CAAGCAGTTAAAGCTGTCGC+TGG + chr1_4:2509498-2509517 Msa0143560:CDS 50.0%
AGCAGTTAAAGCTGTCGCTG+GGG + chr1_4:2509500-2509519 Msa0143560:CDS 50.0%
GGAAGACCACAACAACCAAC+TGG + chr1_4:2509549-2509568 Msa0143560:CDS 50.0%
GGTTGGACCAAGGAATAGGA+AGG - chr1_4:2509577-2509596 None:intergenic 50.0%
! TCTGTTTTACCGACACCGGT+TGG - chr1_4:2520681-2520700 None:intergenic 50.0%
AGATTGATTGGTGCACCACC+AGG + chr1_4:2520795-2520814 Msa0143560:CDS 50.0%
GATTGATTGGTGCACCACCA+GGG + chr1_4:2520796-2520815 Msa0143560:CDS 50.0%
TAACGGAAGCCGTAAGGAGA+AGG + chr1_4:2521154-2521173 Msa0143560:CDS 50.0%
!! GATGACGGGAGATTAACCGA+TGG + chr1_4:2521252-2521271 Msa0143560:CDS 50.0%
CACAGTTCTTCCTTGGCCAT+CGG - chr1_4:2521271-2521290 None:intergenic 50.0%
TTATGAGATGCTCGGCACCA+AGG - chr1_4:2521329-2521348 None:intergenic 50.0%
TGCTGAGAGAGGAATCGCAT+TGG + chr1_4:2521530-2521549 Msa0143560:CDS 50.0%
GGGCTAGACCAATTAGAAGG+TGG + chr1_4:2521733-2521752 Msa0143560:CDS 50.0%
TGACGAATCTGCACGTTCCG+TGG + chr1_4:2507309-2507328 Msa0143560:CDS 55.0%
! TGTGGTGGAGGCTGTTGAGT+AGG - chr1_4:2507367-2507386 None:intergenic 55.0%
TCTGGTACATGCTGTGGTGG+AGG - chr1_4:2507379-2507398 None:intergenic 55.0%
! CAGGAAGCACAGAAGTCACG+CGG + chr1_4:2507433-2507452 Msa0143560:CDS 55.0%
!! GATATGGGAGCGTTAGTCGC+TGG + chr1_4:2507868-2507887 Msa0143560:CDS 55.0%
!! AGGGCGTCGTCTTCCTGATA+AGG + chr1_4:2508649-2508668 Msa0143560:intron 55.0%
GCTCCTCTTTGCACTACAGG+AGG + chr1_4:2509209-2509228 Msa0143560:CDS 55.0%
CAGCCTCCTGTAGTGCAAAG+AGG - chr1_4:2509215-2509234 None:intergenic 55.0%
TTGCACTACAGGAGGCTGAG+AGG + chr1_4:2509217-2509236 Msa0143560:CDS 55.0%
GAGGTTGTAAGCCGATGGAC+CGG + chr1_4:2509387-2509406 Msa0143560:CDS 55.0%
GCTGTAGTGAGATCGAGAGC+TGG + chr1_4:2509522-2509541 Msa0143560:CDS 55.0%
! GTGAGATCGAGAGCTGGTCT+AGG + chr1_4:2509528-2509547 Msa0143560:CDS 55.0%
TACCGAAACCGGTTGGACCA+AGG - chr1_4:2509587-2509606 None:intergenic 55.0%
AGATTGATCGGTGCACCACC+AGG + chr1_4:2509708-2509727 Msa0143560:CDS 55.0%
GATTGATCGGTGCACCACCA+GGG + chr1_4:2509709-2509728 Msa0143560:CDS 55.0%
TTATGAGATGCTCGGCACCG+AGG - chr1_4:2510259-2510278 None:intergenic 55.0%
! GGTGCCGAGCATCTCATAAG+TGG + chr1_4:2510260-2510279 Msa0143560:CDS 55.0%
GCTAGTCGTCTTGCTGAGAG+AGG + chr1_4:2510449-2510468 Msa0143560:CDS 55.0%
ACGTCGGAACTCGTCCGTTT+GGG - chr1_4:2515050-2515069 None:intergenic 55.0%
!! GAGGGGTGTCCGTGCTTAAT+AGG - chr1_4:2516667-2516686 None:intergenic 55.0%
CCCTCGGATAAGATGTGTCC+TGG + chr1_4:2516682-2516701 Msa0143560:intron 55.0%
CACGACACTTGTCCAACACC+AGG - chr1_4:2516703-2516722 None:intergenic 55.0%
GACACGACACGGACACTAAC+AGG - chr1_4:2516802-2516821 None:intergenic 55.0%
GTTAGTGTCCGTGTCGTGTC+CGG + chr1_4:2516802-2516821 Msa0143560:intron 55.0%
CATGAACACCGGACACGACA+CGG - chr1_4:2516813-2516832 None:intergenic 55.0%
GGTTGAGGGCTTGACTCTTG+AGG + chr1_4:2517593-2517612 Msa0143560:intron 55.0%
TGACGAATCTGCACGTTCCG+TGG + chr1_4:2507309-2507328 Msa0143560:CDS 55.0%
! TGTGGTGGAGGCTGTTGAGT+AGG - chr1_4:2507367-2507386 None:intergenic 55.0%
! CAGGAAGCACAGAAGTCACG+CGG + chr1_4:2507433-2507452 Msa0143560:CDS 55.0%
!! GATATGGGAGCGTTAGTCGC+TGG + chr1_4:2507868-2507887 Msa0143560:CDS 55.0%
GCTCCTCTTTGCACTACAGG+AGG + chr1_4:2509209-2509228 Msa0143560:CDS 55.0%
CAGCCTCCTGTAGTGCAAAG+AGG - chr1_4:2509215-2509234 None:intergenic 55.0%
TTGCACTACAGGAGGCTGAG+AGG + chr1_4:2509217-2509236 Msa0143560:CDS 55.0%
GAGGTTGTAAGCCGATGGAC+CGG + chr1_4:2509387-2509406 Msa0143560:CDS 55.0%
GCTGTAGTGAGATCGAGAGC+TGG + chr1_4:2509522-2509541 Msa0143560:CDS 55.0%
! GTGAGATCGAGAGCTGGTCT+AGG + chr1_4:2509528-2509547 Msa0143560:CDS 55.0%
! CACCGGTTGGACCAAGGAAT+AGG - chr1_4:2520668-2520687 None:intergenic 55.0%
TTCCTTGGTCCAACCGGTGT+CGG + chr1_4:2520669-2520688 Msa0143560:CDS 55.0%
GGGAGATTAACCGATGGCCA+AGG + chr1_4:2521258-2521277 Msa0143560:CDS 55.0%
CGATGGCCAAGGAAGAACTG+TGG + chr1_4:2521269-2521288 Msa0143560:CDS 55.0%
! GGTGCCGAGCATCTCATAAG+TGG + chr1_4:2510260-2510279 Msa0143560:CDS 55.0%
GCTAGTCGTCTTGCTGAGAG+AGG + chr1_4:2510449-2510468 Msa0143560:CDS 55.0%
CACTACAGGAGGCTGAGAGG+CGG + chr1_4:2509220-2509239 Msa0143560:CDS 60.0%
! ATGCTCGGCACCGAGGTTTG+AGG - chr1_4:2510252-2510271 None:intergenic 60.0%
TCGGTCGCGAGCAACTTGCA+TGG - chr1_4:2510303-2510322 None:intergenic 60.0%
TGCTCGCGACCGAGTAATGC+TGG + chr1_4:2510310-2510329 Msa0143560:CDS 60.0%
GACGTCGGAACTCGTCCGTT+TGG - chr1_4:2515051-2515070 None:intergenic 60.0%
AAACGGTCGCGGTCGCGTTA+AGG + chr1_4:2516973-2516992 Msa0143560:intron 60.0%
!! CTCGGTGCTGGTCGATGTCA+AGG + chr1_4:2519076-2519095 Msa0143560:CDS 60.0%
!! AGGGCGTCGTCTTCCGGATA+AGG + chr1_4:2519735-2519754 Msa0143560:intron 60.0%
CACTACAGGAGGCTGAGAGG+CGG + chr1_4:2509220-2509239 Msa0143560:CDS 60.0%
! TACCGACACCGGTTGGACCA+AGG - chr1_4:2520674-2520693 None:intergenic 60.0%
TCGGTCGCGAGCAACTTGCA+TGG - chr1_4:2510303-2510322 None:intergenic 60.0%
TGCTCGCGACCGAGTAATGC+TGG + chr1_4:2510310-2510329 Msa0143560:CDS 60.0%
!! CTCGGTGCCGGTCGATGTCA+AGG + chr1_4:2507997-2508016 Msa0143560:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 2507145 2522395 2507145 ID=Msa0143560;Name=Msa0143560
chr1_4 mRNA 2507145 2522395 2507145 ID=Msa0143560-mRNA-1;Parent=Msa0143560;Name=Msa0143560-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.54|0.5|1|0.90|0.91|12|0|1421
chr1_4 exon 2507145 2507454 2507145 ID=Msa0143560-mRNA-1:exon:1134;Parent=Msa0143560-mRNA-1
chr1_4 exon 2507818 2508231 2507818 ID=Msa0143560-mRNA-1:exon:1135;Parent=Msa0143560-mRNA-1
chr1_4 exon 2508651 2508832 2508651 ID=Msa0143560-mRNA-1:exon:1136;Parent=Msa0143560-mRNA-1
chr1_4 exon 2509096 2509730 2509096 ID=Msa0143560-mRNA-1:exon:1137;Parent=Msa0143560-mRNA-1
chr1_4 exon 2510055 2510532 2510055 ID=Msa0143560-mRNA-1:exon:1138;Parent=Msa0143560-mRNA-1
chr1_4 exon 2510656 2510904 2510656 ID=Msa0143560-mRNA-1:exon:1139;Parent=Msa0143560-mRNA-1
chr1_4 exon 2518890 2519310 2518890 ID=Msa0143560-mRNA-1:exon:1140;Parent=Msa0143560-mRNA-1
chr1_4 exon 2519737 2519918 2519737 ID=Msa0143560-mRNA-1:exon:1141;Parent=Msa0143560-mRNA-1
chr1_4 exon 2520183 2520817 2520183 ID=Msa0143560-mRNA-1:exon:1142;Parent=Msa0143560-mRNA-1
chr1_4 exon 2521125 2521602 2521125 ID=Msa0143560-mRNA-1:exon:1143;Parent=Msa0143560-mRNA-1
chr1_4 exon 2521726 2521974 2521726 ID=Msa0143560-mRNA-1:exon:1144;Parent=Msa0143560-mRNA-1
chr1_4 exon 2522363 2522395 2522363 ID=Msa0143560-mRNA-1:exon:1145;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2507145 2507454 2507145 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2507818 2508231 2507818 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2508651 2508832 2508651 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2509096 2509730 2509096 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2510055 2510532 2510055 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2510656 2510904 2510656 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2518890 2519310 2518890 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2519737 2519918 2519737 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2520183 2520817 2520183 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2521125 2521602 2521125 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2521726 2521974 2521726 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
chr1_4 CDS 2522363 2522395 2522363 ID=Msa0143560-mRNA-1:cds;Parent=Msa0143560-mRNA-1
Gene Sequence

>Msa0143560

ATGGATCCACGAAAGTTTACAAACAAAACAAACGAATCATTTGCTGTTGCTAGAAAACTAGCAATAAGTTCAGGACATGCTCAGCTCACTCCCGTACACCTTGCATCCACTTTAATTTCTGATCTCAATGGTATATTTTTCCAAGCAATTTCCAATGTCGGTGGTGACGAATCTGCACGTTCCGTGGAAAGAGTTTTAAAACAAGCACTGAAAAAATATCCTACTCAACAGCCTCCACCACAGCATGTACCAGAAAGCTCTTCCATTATCAAAGTCATTGAAAGAGCACAGGAAGCACAGAAGTCACGCGTTAGAGGAGATGTTCCTAGTAATCTTGCTGATGTTAAGTTATTTGCTTTGGATATGGGAGCGTTAGTCGCTGGTACTGAGTATAGGGGACAATTTGAAGAAAGGTTGAAGGCAGTTTTGAAAGAAGTGGAAGATGCTGAAGGGAAGGTTATTGTTTTCATTGATGAAATTCATCTTGTTCTCGGTGCCGGTCGATGTCAAGGATCAATGGATGCTGCTAATCTTTTCAAACCTATGCTTGCTCGTGGACAACTTAGATGCATCGGTGCAACAACACTTGATGAATATAGGCAATATGTTGAAAAGGATGCTGCATTTGAAAGGAGGTTTCAACAGGTTCATGTTTCTGAACCTAGTGTGCCTGATACCATTAGTATTCTCCGTGGACTAAAAGAGAAATATGAGGGTCATCATGGGCGTCGTCTTCCTGATAAGGCAATTGATTTAGTTGACGAGGCTTGTGCAAATGTTAGAGTTCAACTTGACAGTCAGCCAGAGGAAATTGACAACCTTGAAAGGAAGAGAATGCAACTGGAAGTAGAACTCCATGCTTTGGAGAAAGAGGAGGACAAAGCTAGCAAAGCTCGTCTTGTAGATGTGCGGAAAGAACTTGACAATTTAAGAGACAAGCTTCAACCTCTGAAGATGAAGTATAGCAAAGAGAAAGAGAGGATTGATGAGATTCGAAGTCTGAAACAGAAACGTGAAGAGCTCCTCTTTGCACTACAGGAGGCTGAGAGGCGGTATGATCTAGCCAGAGCTGCAGACCTACGATATGGTGCAATTGAAGAGGTGGAAAATGCAATAAAAAATCTTGAAGGTAGCACTGATGGGAACAAAGGTGAGAACTTGATGCTGACGGAAACTGTTGGACCAGATCAAATAGCTGAGGTTGTAAGCCGATGGACCGGTATACCAGTGACTCGTTTAGGCCAAAATGATAAAGAAAGGTTGGTTGGACTTGGTGACAGATTGCATAGTAGAGTTGTGGGACAAGACCAAGCAGTTAAAGCTGTCGCTGAGGCTGTAGTGAGATCGAGAGCTGGTCTAGGAAGACCACAACAACCAACTGGTTCCTTCCTATTCCTTGGTCCAACCGGTTTCGGTAAAACAGAACTTGCTAAGGCTCTTGCTCAACAACTCTTTGATAATGAAAATCAGATGGTTAGACTTGACATGTCGGAATACATGGAAAAATACTCGGTATCAAGATTGATCGGTGCACCACCAGGGTATATTGGACATGACGAAGGTGGACAATTGACCGAAGCTGTAAGGAGAAAGCCTTACAGTCTAGTACTTTTTGATGAAGTAGAGAAAGCACATACATCTGTATTCAACACTCTGCTTCAAGTCTTAGACGATGGAAGATTAACTGATGGCCAAGGAAGAACTGTTGATTTTAGGAACACAGTCATTATCATGACCTCAAACCTCGGTGCCGAGCATCTCATAAGTGGACTTTCAGGAAATTGTACCATGCAAGTTGCTCGCGACCGAGTAATGCTGGAAGTAAAAAAGCATTTCAGGCCAGAATTGTTGAATAGGCTGGACGAAGTTGTTGTATTCGATCCTCTATCTCACGAGCAATTGATGAAGGTTGCAAGGTTGCAAATGAAGGATGTAGCTAGTCGTCTTGCTGAGAGAGGAATTGCATTGGCAGTTACTGATCCAGCACTAGATTATATACTTGCTGAAAGCTATGATCCCGTGTATGGTGCTAGACCAATTAGAAGGTGGCTTGAGAAAAATGTGGTGACAGAGCTGTCTATGATGCTTATAAAGGAAGAAATTGATGAGAATACAACTGTATGCATTGATGCTGGTCCAAAGGGAAGTGATTTGGTATACCGTGTGGAAAAGAATGGAGGGATTGTTGATGCTGAAACTGGTGTGAAGTCGGATATTTTGATTCAGATTCCAAATGGACCAAAAACTGTCGGTGAAAATGGATATGAGAGAATAGTTAGAGGAGATGTTCCTAGTAATCTTGCTGACGTTAGATTATTTGCTTTGGATATGGGAGCGTTAGTCGCTGGTACTCAGTATAGGGGACAATTTGAAGAAAGGTTGAAGGCAGTTTTGAAAGAAGTGGAAGATGCTGAAGGGAAGGTTATTGTTTTCATTGATGAAATTCATCTTGTTCTCGGTGCTGGTCGATGTCAAGGATCAATGGATGCTGCTAATCTTTTCAAACCTATGCTTGCTCGTGGACAACTTAGATGCATCGGTGCAACAACACTTGATGAATATAGGCAATATGTTGAAAAGGATGCTGCATTTGAAAGGAGGTTTCAACAGGTTCATGTTTCTGAACCTAGTGTGCCTGATACCATTAGTATTCTTCGTGGATTAAAAGAGAAATATGAGGGTCATCATGGGCGTCGTCTTCCGGATAAGGCAATTGATTTAGTTGACGAGGCTTGTGCAAATGTTAGAGTTCAACTTGACAGTCAGCCTGAGGAAATTGACAACCTTGAAAGGAAAAGAATGCAACTGGAAGTGGAACTTCATGCTTTGGAGAAAGAGGAGGACAAAGCTAGCAAAGCTCGTCTTGTAGATGTGCAGAAAGAACTCGACAATTTACGAGACAAGCTTCAACCTCTGAAGATGAAGTATAGCAAAGAGAAAGAGAGGATTGATGAGGTTCGAAGACTGAAACAGAAACGTGAAGAGCTCCTCTTTGCACTACAGGAGGCTGAGAGGCGGTATGATCTAGCCAGAGCTGCAGACCTACGATATGGTGCAATTGAAGAGGTGGAAAATGCAATAAAAAATCTTGAAGGTAGCACTGATGGGAACAAAGGTGAGAACTTGATGCTGACGGAAATTGTTGGACCAGATCAAATAGCTGAGGTTGTAAGCCGATGGACCGGTATACCAGTGACTCGTTTAGGCCAAAATGATAAAGAAAGATTGGTTGGACTTGGTGACAGATTGCACAGTAGAGTTGTGGGACAAGACCAAGCAGTTAAAGCTGTCGCTGGGGCTGTAGTGAGATCGAGAGCTGGTCTAGGAAGACCACAACAACCAACTGGTTCCTTCCTATTCCTTGGTCCAACCGGTGTCGGTAAAACAGAACTTGCTAAGGCTCTTGCTCAACAACTCTTTGATAATGAAAATCAAATGGTTAGACTTGACATGTCGGAATACATGGAAAAATTCTCGGTATCAAGATTGATTGGTGCACCACCAGGGTATATTGGACATGACGAAGGTGGACAATTAACGGAAGCCGTAAGGAGAAGGCCTTACAGTCTAGTACTTTTTGATGAAGTTGAGAGGGCACACACATCTGTATTCAACACTCTGCTTCAAGTCTTAGATGACGGGAGATTAACCGATGGCCAAGGAAGAACTGTGGATTTTAGGAACACAGTCATTATCATGACTTCAAACCTTGGTGCCGAGCATCTCATAAGTGGACTTTCAGGAAATTGTACCATGCAAGTTGCTCGCGACCGAGTAATGCTGGAAGTAAAAAAGCATTTCAGGCCAGAATTGTTGAATAGGCTGGACGAAGTTGTTGTATTCGATCCTCTATCTCACGAGCAATTGATGAAGGTTGCAAGGTTGCAAATGAAGGATGTAGCTAGTCGTCTTGCTGAGAGAGGAATCGCATTGGCAGTTACAGATCCAGCACTAGATTATATACTTGCTGAAAGCTATGATCCTGTGTATGGGGCTAGACCAATTAGAAGGTGGCTTGAGAAGAATGTGGTGACAGAGCTATCTATGATGCTTATAAGGGAAGAAATTGATGAGAATACAACTGTATGCATTGATGCTGGTCCAAAGGGAAGTGATTTGGTATACCGTGTGGAAAAGAATGGAGGGATTGTTGATGCTGAAACTGGTGTGAAGTCTGATATTTTGATACAGATACCAAATGGACCAAAAACTGTTGGTGAAAATGGATATGAGCAAGTTCATTCTCATCAATTTTGGAGGGAGTAG
Protein sequence

>Msa0143560

MDPRKFTNKTNESFAVARKLAISSGHAQLTPVHLASTLISDLNGIFFQAISNVGGDESARSVERVLKQALKKYPTQQPPPQHVPESSSIIKVIERAQEAQKSRVRGDVPSNLADVKLFALDMGALVAGTEYRGQFEERLKAVLKEVEDAEGKVIVFIDEIHLVLGAGRCQGSMDAANLFKPMLARGQLRCIGATTLDEYRQYVEKDAAFERRFQQVHVSEPSVPDTISILRGLKEKYEGHHGRRLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEEDKASKARLVDVRKELDNLRDKLQPLKMKYSKEKERIDEIRSLKQKREELLFALQEAERRYDLARAADLRYGAIEEVENAIKNLEGSTDGNKGENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNDKERLVGLGDRLHSRVVGQDQAVKAVAEAVVRSRAGLGRPQQPTGSFLFLGPTGFGKTELAKALAQQLFDNENQMVRLDMSEYMEKYSVSRLIGAPPGYIGHDEGGQLTEAVRRKPYSLVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLISGLSGNCTMQVARDRVMLEVKKHFRPELLNRLDEVVVFDPLSHEQLMKVARLQMKDVASRLAERGIALAVTDPALDYILAESYDPVYGARPIRRWLEKNVVTELSMMLIKEEIDENTTVCIDAGPKGSDLVYRVEKNGGIVDAETGVKSDILIQIPNGPKTVGENGYERIVRGDVPSNLADVRLFALDMGALVAGTQYRGQFEERLKAVLKEVEDAEGKVIVFIDEIHLVLGAGRCQGSMDAANLFKPMLARGQLRCIGATTLDEYRQYVEKDAAFERRFQQVHVSEPSVPDTISILRGLKEKYEGHHGRRLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEEDKASKARLVDVQKELDNLRDKLQPLKMKYSKEKERIDEVRRLKQKREELLFALQEAERRYDLARAADLRYGAIEEVENAIKNLEGSTDGNKGENLMLTEIVGPDQIAEVVSRWTGIPVTRLGQNDKERLVGLGDRLHSRVVGQDQAVKAVAGAVVRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAQQLFDNENQMVRLDMSEYMEKFSVSRLIGAPPGYIGHDEGGQLTEAVRRRPYSLVLFDEVERAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLISGLSGNCTMQVARDRVMLEVKKHFRPELLNRLDEVVVFDPLSHEQLMKVARLQMKDVASRLAERGIALAVTDPALDYILAESYDPVYGARPIRRWLEKNVVTELSMMLIREEIDENTTVCIDAGPKGSDLVYRVEKNGGIVDAETGVKSDILIQIPNGPKTVGENGYEQVHSHQFWRE*