AlfalfaGEDB | Msa0168320

M. sativa cultivar zhongmu-4 / Msa0168320

KEGG: K02958
GO: GO:0000028 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006996 GO:0008150 GO:0009506 GO:0009987 GO:0015935 GO:0016020 GO:0016043 GO:0022607 GO:0022613 GO:0022618 GO:0022626 GO:0022627 GO:0030054 GO:0031090 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0042254 GO:0042255 GO:0042274 GO:0042788 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0065003 GO:0070013 GO:0070925 GO:0071826 GO:0071840 GO:0071944 GO:0098588 GO:0098805 GO:1990904
PFAM: PF00203.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168320	GAU44818.1	100.000	152	0	0	1	152	1	152	1.05e-105	308

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168320	sp\|P31674\|RS15_ORYSJ	88.961	154	15	1	1	152	1	154	2.22e-96	277

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168320	A0A2Z6NJY7	100.000	152	0	0	1	152	1	152	4.99e-106	308

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa0168320	0.839041	2.008029e-57	-8.615850e-47
Msa0003330	Msa0168320	0.863615	2.194299e-64	-8.615850e-47
Msa0027590	Msa0168320	0.874648	5.732906e-68	-8.615850e-47
Msa0037230	Msa0168320	0.802336	5.888769e-49	-8.615850e-47
Msa0042510	Msa0168320	0.861598	9.166099e-64	-8.615850e-47
Msa0065330	Msa0168320	0.821946	3.081482e-53	-8.615850e-47
Msa0075350	Msa0168320	0.832831	7.551943e-56	-8.615850e-47
Msa0079560	Msa0168320	0.841813	3.783121e-58	-8.615850e-47
Msa0094210	Msa0168320	0.818881	1.554894e-52	-8.615850e-47
Msa0127230	Msa0168320	0.829171	5.975910e-55	-8.615850e-47
Msa0128330	Msa0168320	0.850583	1.545965e-60	-8.615850e-47
Msa0132460	Msa0168320	0.819308	1.243247e-52	-8.615850e-47
Msa0159870	Msa0168320	0.824743	6.841957e-54	-8.615850e-47
Msa0167860	Msa0168320	0.870697	1.200036e-66	-8.615850e-47
Msa0168320	Msa0174580	0.839618	1.422531e-57	-8.615850e-47
Msa0168320	Msa0177940	0.812813	3.509483e-51	-8.615850e-47
Msa0168320	Msa0182050	0.825758	3.936568e-54	-8.615850e-47
Msa0168320	Msa0182100	0.836229	1.057563e-56	-8.615850e-47
Msa0168320	Msa0191450	0.855586	5.713493e-62	-8.615850e-47
Msa0168320	Msa0191550	0.855271	7.057254e-62	-8.615850e-47
Msa0168320	Msa0192300	0.863451	2.466502e-64	-8.615850e-47
Msa0168320	Msa0195030	0.832264	1.043728e-55	-8.615850e-47
Msa0168320	Msa0216200	0.808435	3.101122e-50	-8.615850e-47
Msa0168320	Msa0233550	0.896348	4.021682e-76	-8.615850e-47
Msa0168320	Msa0237180	0.808893	2.476530e-50	-8.615850e-47
Msa0168320	Msa0239420	0.876347	1.501612e-68	-8.615850e-47
Msa0168320	Msa0274940	0.836740	7.836811e-57	-8.615850e-47
Msa0168320	Msa0277600	0.809177	2.152280e-50	-8.615850e-47
Msa0168320	Msa0281370	0.818030	2.424667e-52	-8.615850e-47
Msa0168320	Msa0301250	0.869962	2.088677e-66	-8.615850e-47
Msa0168320	Msa0313060	0.858275	9.215376e-63	-8.615850e-47
Msa0168320	Msa0315430	0.822765	1.987837e-53	-8.615850e-47
Msa0168320	Msa0315660	0.813947	1.977764e-51	-8.615850e-47
Msa0168320	Msa0371490	0.864461	1.195961e-64	-8.615850e-47
Msa0168320	Msa0376850	0.874417	6.865129e-68	-8.615850e-47
Msa0168320	Msa0377520	0.855879	4.690393e-62	-8.615850e-47
Msa0168320	Msa0382670	0.888552	5.336395e-73	-8.615850e-47
Msa0168320	Msa0388520	0.815497	8.968740e-52	-8.615850e-47
Msa0168320	Msa0416470	0.839628	1.413974e-57	-8.615850e-47
Msa0168320	Msa0426090	0.859545	3.839937e-63	-8.615850e-47
Msa0168320	Msa0426250	0.816351	5.783457e-52	-8.615850e-47
Msa0168320	Msa0436750	0.800473	1.417702e-48	-8.615850e-47
Msa0168320	Msa0472480	0.865694	4.903648e-65	-8.615850e-47
Msa0168320	Msa0481520	0.826570	2.522809e-54	-8.615850e-47
Msa0168320	Msa0485220	0.828055	1.111877e-54	-8.615850e-47
Msa0168320	Msa0511760	0.869631	2.678953e-66	-8.615850e-47
Msa0168320	Msa0516830	0.874305	7.493083e-68	-8.615850e-47
Msa0168320	Msa0517480	0.822948	1.802367e-53	-8.615850e-47
Msa0168320	Msa0573550	0.877734	4.952966e-69	-8.615850e-47
Msa0168320	Msa0574780	0.883485	4.311387e-71	-8.615850e-47
Msa0168320	Msa0578010	0.815210	1.038930e-51	-8.615850e-47
Msa0168320	Msa0597240	0.851811	6.958479e-61	-8.615850e-47
Msa0168320	Msa0605600	0.805813	1.113403e-49	-8.615850e-47
Msa0168320	Msa0605890	0.830502	2.832298e-55	-8.615850e-47
Msa0168320	Msa0609120	0.813418	2.585937e-51	-8.615850e-47
Msa0168320	Msa0619230	0.882032	1.463630e-70	-8.615850e-47
Msa0168320	Msa0621190	0.892587	1.383213e-74	-8.615850e-47
Msa0168320	Msa0649890	0.809784	1.594323e-50	-8.615850e-47
Msa0168320	Msa0656450	0.855037	8.255532e-62	-8.615850e-47
Msa0168320	Msa0686550	0.811933	5.464116e-51	-8.615850e-47
Msa0168320	Msa0691760	0.885219	9.815060e-72	-8.615850e-47
Msa0168320	Msa0694400	0.847092	1.439091e-59	-8.615850e-47
Msa0168320	Msa0700370	0.850766	1.373532e-60	-8.615850e-47
Msa0168320	Msa0704860	0.829697	4.451504e-55	-8.615850e-47
Msa0168320	Msa0708630	0.820095	8.218326e-53	-8.615850e-47
Msa0168320	Msa0752240	0.850296	1.861323e-60	-8.615850e-47
Msa0168320	Msa0758420	0.865471	5.765108e-65	-8.615850e-47
Msa0168320	Msa0788380	0.827414	1.585231e-54	-8.615850e-47
Msa0168320	Msa0822580	0.812905	3.350457e-51	-8.615850e-47
Msa0168320	Msa0833550	0.801379	9.259773e-49	-8.615850e-47
Msa0168320	Msa0834220	0.848264	6.845454e-60	-8.615850e-47
Msa0168320	Msa0838070	0.856793	2.529177e-62	-8.615850e-47
Msa0168320	Msa0858010	0.801690	7.995234e-49	-8.615850e-47
Msa0168320	Msa0929680	0.806835	6.782698e-50	-8.615850e-47
Msa0168320	Msa0929700	0.866232	3.314620e-65	-8.615850e-47
Msa0168320	Msa0929790	0.829767	4.281989e-55	-8.615850e-47
Msa0168320	Msa0930360	0.868863	4.759279e-66	-8.615850e-47
Msa0168320	Msa0930790	0.854832	9.461683e-62	-8.615850e-47
Msa0168320	Msa0930890	0.806709	7.212185e-50	-8.615850e-47
Msa0168320	Msa1041680	0.827849	1.246685e-54	-8.615850e-47
Msa0168320	Msa1042100	0.828031	1.126725e-54	-8.615850e-47
Msa0168320	Msa1082050	0.850309	1.846245e-60	-8.615850e-47
Msa0168320	Msa1082170	0.818978	1.477945e-52	-8.615850e-47
Msa0168320	Msa1124980	0.802530	5.371067e-49	-8.615850e-47
Msa0168320	Msa1126690	0.807552	4.779699e-50	-8.615850e-47
Msa0168320	Msa1144630	0.813647	2.302527e-51	-8.615850e-47
Msa0168320	Msa1156830	0.833821	4.278905e-56	-8.615850e-47
Msa0168320	Msa1164150	0.823646	1.238421e-53	-8.615850e-47
Msa0168320	Msa1165700	0.805837	1.100722e-49	-8.615850e-47
Msa0168320	Msa1166570	0.830176	3.402948e-55	-8.615850e-47
Msa0168320	Msa1180000	0.815390	9.474361e-52	-8.615850e-47
Msa0168320	Msa1186030	0.812195	4.790826e-51	-8.615850e-47
Msa0168320	Msa1206240	0.807952	3.931507e-50	-8.615850e-47
Msa0168320	Msa1213850	0.817088	3.953488e-52	-8.615850e-47
Msa0168320	Msa1235950	0.842045	3.285611e-58	-8.615850e-47
Msa0168320	Msa1235980	0.852743	3.778234e-61	-8.615850e-47
Msa0168320	Msa1237040	0.826859	2.152655e-54	-8.615850e-47
Msa0168320	Msa1240270	0.800399	1.467987e-48	-8.615850e-47
Msa0168320	Msa1258540	0.814182	1.754728e-51	-8.615850e-47
Msa0168320	Msa1284800	0.848029	7.951249e-60	-8.615850e-47
Msa0168320	Msa1316100	0.816215	6.203061e-52	-8.615850e-47
Msa0168320	Msa1317390	0.861327	1.108708e-63	-8.615850e-47
Msa0168320	Msa1351020	0.870875	1.047973e-66	-8.615850e-47
Msa0168320	Msa1358710	0.815022	1.143551e-51	-8.615850e-47
Msa0168320	Msa1363910	0.807904	4.024758e-50	-8.615850e-47
Msa0168320	Msa1363930	0.816605	5.072543e-52	-8.615850e-47
Msa0168320	Msa1385480	0.819320	1.235876e-52	-8.615850e-47
Msa0168320	Msa1387750	0.863184	2.983730e-64	-8.615850e-47
Msa0168320	Msa1390760	0.881153	3.041673e-70	-8.615850e-47
Msa0168320	Msa1407550	0.871203	8.172957e-67	-8.615850e-47
Msa0168320	Msa1413570	0.858547	7.646050e-63	-8.615850e-47
Msa0168320	Msa1432310	0.860805	1.598907e-63	-8.615850e-47
Msa0168320	Msa1446410	0.814832	1.260190e-51	-8.615850e-47
Msa0168320	Msa1446510	0.801444	8.978104e-49	-8.615850e-47
Msa0168320	Msa1450560	0.802161	6.398199e-49	-8.615850e-47
Msa0168320	Msa1453380	0.837734	4.364033e-57	-8.615850e-47
Msa0168320	Msa1453530	0.823085	1.674304e-53	-8.615850e-47
Msa0168320	Msa1463570	0.849157	3.871023e-60	-8.615850e-47
Msa0168320	Msa1465700	0.869272	3.505639e-66	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168320	MtrunA17_Chr1g0184681	99.342	152	1	0	1	152	1	152	2.95e-109	307
Msa0168320	MtrunA17_Chr4g0038481	96.711	152	5	0	1	152	1	152	8.07e-105	296
Msa0168320	MtrunA17_Chr8g0391601	96.104	154	4	1	1	152	1	154	1.61e-104	295

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168320	AT5G09510.1	94.079	152	9	0	1	152	1	152	6.82e-96	273
Msa0168320	AT1G04270.1	94.079	152	9	0	1	152	1	152	1.06e-95	273
Msa0168320	AT5G09500.1	88.816	152	15	1	1	152	1	150	9.89e-95	270
Msa0168320	AT1G04270.2	93.421	152	9	1	1	152	1	151	3.95e-93	266
Msa0168320	AT5G09490.1	82.237	152	27	0	1	152	1	152	1.17e-90	260
Msa0168320	AT5G43640.1	87.919	149	18	0	4	152	1	149	4.43e-85	246
Msa0168320	AT5G09510.2	94.915	118	6	0	35	152	1	118	4.22e-71	209
Msa0168320	AT5G63070.1	62.500	160	52	3	1	152	1	160	3.97e-63	191
Msa0168320	AT1G33850.1	80.597	67	13	0	4	70	1	67	2.53e-22	84.7

Find 71 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTTAAATGTTCTCTTCTT+TGG	0.218192	1_4:+50826691	None:intergenic
TTAAATAAGTAAATTTATTC+AGG	0.252444	1_4:+50824500	None:intergenic
AAGTTTGCATTGAAAGATAA+TGG	0.308249	1_4:+50824853	None:intergenic
AGGTGAGTCCTCACTGGTTC+TGG	0.312113	1_4:+50825094	None:intergenic
GGTGAATTCGATAGACAAAT+TGG	0.314050	1_4:-50824611	Msa0168320:three_prime_UTR
TTCCAGTAATATCTTTCATT+TGG	0.317051	1_4:+50824528	None:intergenic
CGACCTCACTTAAATCTTAC+TGG	0.331030	1_4:-50824632	Msa0168320:three_prime_UTR
CCAGGCCTACCGTGCTTAAC+AGG	0.333020	1_4:+50824938	None:intergenic
AGTTTGCATTGAAAGATAAT+GGG	0.343042	1_4:+50824854	None:intergenic
AGATAATGGCCAATCATTTC+AGG	0.354175	1_4:+50824986	None:intergenic
GATGAGTGCCATAGGCTTGC+GGG	0.362183	1_4:+50826101	None:intergenic
TGAAATGATTGGCCATTATC+TGG	0.368757	1_4:-50824984	Msa0168320:CDS
TCTCTGCTCGTGCACGTAGA+AGG	0.369916	1_4:-50826600	Msa0168320:intron
GAAATTAAGCCTGAAATGAT+TGG	0.379557	1_4:-50824995	Msa0168320:CDS
CTTAATTTCAACTTGGTTGA+AGG	0.392478	1_4:+50825009	None:intergenic
GTCCAAATGAAAGATATTAC+TGG	0.427263	1_4:-50824530	Msa0168320:three_prime_UTR
TTGAGAATTCAGCCAGATAA+TGG	0.430982	1_4:+50824972	None:intergenic
ACTCCTTGTGCAGCTACCTC+TGG	0.435684	1_4:+50826715	None:intergenic
GAGATGATCGGTAGCATCAT+TGG	0.436840	1_4:-50825049	Msa0168320:CDS
GCAGTGAAACTTGCTCGATC+TGG	0.436867	1_4:+50826851	None:intergenic
CTCACCTCTCAAGGATTGCT+AGG	0.454578	1_4:+50826893	None:intergenic
TATTATTGACCATTAAAGCT+TGG	0.456102	1_4:-50824670	Msa0168320:three_prime_UTR
ACAGAAAAGGGAAGCTCCAC+CGG	0.457421	1_4:-50825125	Msa0168320:intron
TGTTGATCTCGATGCTCTCT+TGG	0.464094	1_4:-50826653	Msa0168320:CDS
CCTGTTAAGCACGGTAGGCC+TGG	0.480548	1_4:-50824938	Msa0168320:CDS
CTATAAACCTTATAAAATAG+AGG	0.480900	1_4:+50824703	None:intergenic
CGGCTGCTTCTCACCTCTCA+AGG	0.486245	1_4:+50826884	None:intergenic
TCATTTGGACTACACATAGC+AGG	0.487355	1_4:+50824543	None:intergenic
ACTGGTTCTGGCTTCTCACC+CGG	0.493454	1_4:+50825106	None:intergenic
TTGGTGCTACTCACTCCTCC+AGG	0.496949	1_4:-50824913	Msa0168320:CDS
TGGTTTGACCCGCAAGCCTA+TGG	0.497772	1_4:-50826109	Msa0168320:CDS
TCACCTCTCAAGGATTGCTA+GGG	0.512494	1_4:+50826894	None:intergenic
TTTGATATTGTTGTGACACT+AGG	0.516580	1_4:-50824790	Msa0168320:three_prime_UTR
TGATGAGTGCCATAGGCTTG+CGG	0.517926	1_4:+50826100	None:intergenic
ATGATGCTACCGATCATCTC+AGG	0.518042	1_4:+50825052	None:intergenic
AGCAAGTTTCACTGCAATCA+TGG	0.522868	1_4:-50826843	Msa0168320:intron
CAGGCACAATGATCATGTTA+CGG	0.535956	1_4:+50825071	None:intergenic
CAGAAAAGGGAAGCTCCACC+GGG	0.540460	1_4:-50825124	Msa0168320:CDS
AAGCACGGTAGGCCTGGTAT+TGG	0.547800	1_4:-50824932	Msa0168320:CDS
TTTCAGGCTTAATTTCAACT+TGG	0.556240	1_4:+50825002	None:intergenic
TTACGGAGGTGAGTCCTCAC+TGG	0.565975	1_4:+50825088	None:intergenic
GAGTGAGTAGCACCAATACC+AGG	0.575625	1_4:+50824920	None:intergenic
TCCTTCAGAATTCATAGCAG+AGG	0.576992	1_4:-50826922	None:intergenic
TTTAAGAAGTTCAGTTTCCG+TGG	0.586451	1_4:-50826676	Msa0168320:CDS
CATTTGGACTACACATAGCA+GGG	0.587119	1_4:+50824544	None:intergenic
AGCTTCTTGATGAGTGCCAT+AGG	0.595409	1_4:+50826093	None:intergenic
ACAAGCCTGTTAAGCACGGT+AGG	0.596494	1_4:-50824943	Msa0168320:CDS
GAACCAGAGGTAGCTGCACA+AGG	0.605663	1_4:-50826718	Msa0168320:CDS
CTCGATCTGGTTCTTGCTCG+CGG	0.612106	1_4:+50826864	None:intergenic
GTTTGCATTGAAAGATAATG+GGG	0.612938	1_4:+50824855	None:intergenic
GGTATATATTCATGAACTAG+AGG	0.613641	1_4:-50824568	Msa0168320:three_prime_UTR
AGCATCATTGGAGTCTACAA+TGG	0.616091	1_4:-50825037	Msa0168320:CDS
GGTTCTGGCTTCTCACCCGG+TGG	0.618126	1_4:+50825109	None:intergenic
TCACTTCAGAGGAATAAACC+TGG	0.626759	1_4:+50824895	None:intergenic
AAGCTTGACAAGTTCATCAG+TGG	0.629931	1_4:+50826624	None:intergenic
GAACCCTAGCAATCCTTGAG+AGG	0.631397	1_4:-50826897	Msa0168320:five_prime_UTR
GATGACAATCTTCACTTCAG+AGG	0.634610	1_4:+50824884	None:intergenic
TCTTACAAGCCTGTTAAGCA+CGG	0.639372	1_4:-50824947	Msa0168320:CDS
TCAGGCGGATGTTGAACCAG+AGG	0.645787	1_4:-50826731	Msa0168320:intron
ACTCATCAAGAAGCTCCGCA+AGG	0.648877	1_4:-50826085	Msa0168320:CDS
ATCATTGTGCCTGAGATGAT+CGG	0.650070	1_4:-50825061	Msa0168320:CDS
TTGCATTGAAAGATAATGGG+GGG	0.651328	1_4:+50824857	None:intergenic
ACAGATAACTCACCGCCTTG+CGG	0.662337	1_4:+50826070	None:intergenic
TTTGCATTGAAAGATAATGG+GGG	0.699506	1_4:+50824856	None:intergenic
TCACCAGTAAGATTTAAGTG+AGG	0.707503	1_4:+50824629	None:intergenic
GCACAATGATCATGTTACGG+AGG	0.711118	1_4:+50825074	None:intergenic
GTGAGAAGCCAGAACCAGTG+AGG	0.711539	1_4:-50825102	Msa0168320:CDS
CATCAAGAAGCTCCGCAAGG+CGG	0.735053	1_4:-50826082	Msa0168320:intron
CTTCAGAGGAATAAACCTGG+AGG	0.744280	1_4:+50824898	None:intergenic
GTTCATTTCAGGTTTCAACG+TGG	0.745899	1_4:-50826129	Msa0168320:intron
GAGCATCGAGATCAACACCA+CGG	0.745908	1_4:+50826659	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTCATTTTGTTTTATTTTG+TGG	-	chr1_4:50825060-50825079	Msa0168320:CDS	15.0%
!!!	TTCATTTTGTTTTATTTTGT+GGG	-	chr1_4:50825061-50825080	Msa0168320:CDS	15.0%
!!	ATTTGGAAATTGTTTATTTA+CGG	-	chr1_4:50825497-50825516	Msa0168320:intron	15.0%
!!!	TTTCATTTTGTTTTATTTTG+TGG	-	chr1_4:50825060-50825079	Msa0168320:CDS	15.0%
!!!	TTCATTTTGTTTTATTTTGT+GGG	-	chr1_4:50825061-50825080	Msa0168320:CDS	15.0%
!!	ATTTGGAAATTGTTTATTTA+CGG	-	chr1_4:50825497-50825516	Msa0168320:intron	15.0%
!!!	ATGAATTTGATTGATTTTTC+AGG	-	chr1_4:50824663-50824682	Msa0168320:three_prime_UTR	20.0%
!!	TAACCTAAAAATGATGAAAA+TGG	+	chr1_4:50825006-50825025	None:intergenic	20.0%
!!!	TTCATCATTTTTAGGTTATT+TGG	-	chr1_4:50825008-50825027	Msa0168320:CDS	20.0%
!!	AACCTAAAATATTCAACATT+TGG	+	chr1_4:50825034-50825053	None:intergenic	20.0%
!!!	TTTTATGTTCTGTTACTTAT+AGG	-	chr1_4:50825185-50825204	Msa0168320:intron	20.0%
!!	ATAAATGTGAAAATGAGAAA+TGG	+	chr1_4:50825251-50825270	None:intergenic	20.0%
!!	TTTAACAATATGTTCATTTC+AGG	-	chr1_4:50825272-50825291	Msa0168320:intron	20.0%
!!	TTTGGAAATTGTTTATTTAC+GGG	-	chr1_4:50825498-50825517	Msa0168320:intron	20.0%
!!	AAAATTTAGATCAAGTAGAA+GGG	+	chr1_4:50825691-50825710	None:intergenic	20.0%
!!	AAAAATTTAGATCAAGTAGA+AGG	+	chr1_4:50825692-50825711	None:intergenic	20.0%
!!	ACAATATACTGTCTTAAATT+TGG	-	chr1_4:50825737-50825756	Msa0168320:intron	20.0%
!!	CAATATACTGTCTTAAATTT+GGG	-	chr1_4:50825738-50825757	Msa0168320:intron	20.0%
!!	AATATACTGTCTTAAATTTG+GGG	-	chr1_4:50825739-50825758	Msa0168320:intron	20.0%
!!	ACAATATACTGTCTTAAATT+TGG	-	chr1_4:50825737-50825756	Msa0168320:intron	20.0%
!!	CAATATACTGTCTTAAATTT+GGG	-	chr1_4:50825738-50825757	Msa0168320:intron	20.0%
!!	AATATACTGTCTTAAATTTG+GGG	-	chr1_4:50825739-50825758	Msa0168320:intron	20.0%
!!!	TTCATTTTAAACTTTTGCTA+TGG	-	chr1_4:50826140-50826159	Msa0168320:intron	20.0%
!!	TTAAAATGATAGCAATGATT+GGG	+	chr1_4:50826182-50826201	None:intergenic	20.0%
!!!	TTTAAAATGATAGCAATGAT+TGG	+	chr1_4:50826183-50826202	None:intergenic	20.0%
!!!	TTTGTTTCCTCTATTTTATA+AGG	-	chr1_4:50826702-50826721	Msa0168320:CDS	20.0%
!!	CTATAAACCTTATAAAATAG+AGG	+	chr1_4:50826712-50826731	None:intergenic	20.0%
!!!	ATAATTTTTCCAAGCTTTAA+TGG	+	chr1_4:50826754-50826773	None:intergenic	20.0%
!!!	ATGAATTTGATTGATTTTTC+AGG	-	chr1_4:50824663-50824682	Msa0168320:three_prime_UTR	20.0%
!!	TAACCTAAAAATGATGAAAA+TGG	+	chr1_4:50825006-50825025	None:intergenic	20.0%
!!!	TTCATCATTTTTAGGTTATT+TGG	-	chr1_4:50825008-50825027	Msa0168320:CDS	20.0%
!!	AACCTAAAATATTCAACATT+TGG	+	chr1_4:50825034-50825053	None:intergenic	20.0%
!!!	TTTTATGTTCTGTTACTTAT+AGG	-	chr1_4:50825185-50825204	Msa0168320:intron	20.0%
!!	ATAAATGTGAAAATGAGAAA+TGG	+	chr1_4:50825251-50825270	None:intergenic	20.0%
!!	TTTAACAATATGTTCATTTC+AGG	-	chr1_4:50825272-50825291	Msa0168320:intron	20.0%
!!	TTTGGAAATTGTTTATTTAC+GGG	-	chr1_4:50825498-50825517	Msa0168320:intron	20.0%
!!	AAAATTTAGATCAAGTAGAA+GGG	+	chr1_4:50825691-50825710	None:intergenic	20.0%
!!	AAAAATTTAGATCAAGTAGA+AGG	+	chr1_4:50825692-50825711	None:intergenic	20.0%
!!	ACAATATACTGTCTTAAATT+TGG	-	chr1_4:50825737-50825756	Msa0168320:intron	20.0%
!!	CAATATACTGTCTTAAATTT+GGG	-	chr1_4:50825738-50825757	Msa0168320:intron	20.0%
!!	AATATACTGTCTTAAATTTG+GGG	-	chr1_4:50825739-50825758	Msa0168320:intron	20.0%
!!	ACAATATACTGTCTTAAATT+TGG	-	chr1_4:50825737-50825756	Msa0168320:intron	20.0%
!!	CAATATACTGTCTTAAATTT+GGG	-	chr1_4:50825738-50825757	Msa0168320:intron	20.0%
!!	AATATACTGTCTTAAATTTG+GGG	-	chr1_4:50825739-50825758	Msa0168320:intron	20.0%
!!!	TTCATTTTAAACTTTTGCTA+TGG	-	chr1_4:50826140-50826159	Msa0168320:intron	20.0%
!!	TTAAAATGATAGCAATGATT+GGG	+	chr1_4:50826182-50826201	None:intergenic	20.0%
!!!	TTTAAAATGATAGCAATGAT+TGG	+	chr1_4:50826183-50826202	None:intergenic	20.0%
!!!	TTTGTTTCCTCTATTTTATA+AGG	-	chr1_4:50826702-50826721	Msa0168320:CDS	20.0%
!!	CTATAAACCTTATAAAATAG+AGG	+	chr1_4:50826712-50826731	None:intergenic	20.0%
!!!	ATAATTTTTCCAAGCTTTAA+TGG	+	chr1_4:50826754-50826773	None:intergenic	20.0%
!!!	AATTTGATTGATTTTTCAGG+CGG	-	chr1_4:50824666-50824685	Msa0168320:three_prime_UTR	25.0%
!	TTCTTAAATGTTCTCTTCTT+TGG	+	chr1_4:50824724-50824743	None:intergenic	25.0%
!!!	CGTTAATCTGATTTATTTTG+AGG	-	chr1_4:50824946-50824965	Msa0168320:CDS	25.0%
!	TTAGAGTTGTATAAGGAATT+TGG	-	chr1_4:50825423-50825442	Msa0168320:intron	25.0%
!!!	GTTTTAGTTGTTGAGTAATT+TGG	-	chr1_4:50825480-50825499	Msa0168320:intron	25.0%
!!	TCTTTTGCATTTGTATCTTT+TGG	-	chr1_4:50825580-50825599	Msa0168320:intron	25.0%
!!	CTTTTGCATTTGTATCTTTT+GGG	-	chr1_4:50825581-50825600	Msa0168320:intron	25.0%
!	CGTTAATCTGATTTATTATG+AGG	-	chr1_4:50825631-50825650	Msa0168320:intron	25.0%
!	AAAGTAATGAATGGATATGA+AGG	+	chr1_4:50824976-50824995	None:intergenic	25.0%
!	ATATACTGTCTTAAATTTGG+GGG	-	chr1_4:50825740-50825759	Msa0168320:intron	25.0%
!	ATATACTGTCTTAAATTTGG+GGG	-	chr1_4:50825740-50825759	Msa0168320:intron	25.0%
!	ACATTTGAACTTAACAGATA+TGG	-	chr1_4:50825822-50825841	Msa0168320:intron	25.0%
!	GTCAAGTTTAATTCAATAAC+AGG	+	chr1_4:50825881-50825900	None:intergenic	25.0%
!	TGTATGATTATGTATCTAAC+CGG	-	chr1_4:50825944-50825963	Msa0168320:intron	25.0%
!	TACCAAATTTGTGTATCATT+GGG	-	chr1_4:50826116-50826135	Msa0168320:CDS	25.0%
!	TTGTATATCCTTACAGAAAA+GGG	-	chr1_4:50826275-50826294	Msa0168320:intron	25.0%
!	AGTTTGCATTGAAAGATAAT+GGG	+	chr1_4:50826561-50826580	None:intergenic	25.0%
!	AAGTTTGCATTGAAAGATAA+TGG	+	chr1_4:50826562-50826581	None:intergenic	25.0%
!!!	CAAACTTTTACTTGTTTTAC+TGG	-	chr1_4:50826575-50826594	Msa0168320:intron	25.0%
!!	TATCAGTGAACTAAAGTTTT+TGG	-	chr1_4:50826646-50826665	Msa0168320:CDS	25.0%
!!	TTGTTTATTGATGAGCTTTT+TGG	-	chr1_4:50826675-50826694	Msa0168320:CDS	25.0%
!	TATTATTGACCATTAAAGCT+TGG	-	chr1_4:50826742-50826761	Msa0168320:intron	25.0%
!	AAAGCTTGGAAAAATTATAG+TGG	-	chr1_4:50826756-50826775	Msa0168320:intron	25.0%
!	AAGCTTGGAAAAATTATAGT+GGG	-	chr1_4:50826757-50826776	Msa0168320:intron	25.0%
!	TTCCAGTAATATCTTTCATT+TGG	+	chr1_4:50826887-50826906	None:intergenic	25.0%
!!!	AATTTGATTGATTTTTCAGG+CGG	-	chr1_4:50824666-50824685	Msa0168320:three_prime_UTR	25.0%
!	TTCTTAAATGTTCTCTTCTT+TGG	+	chr1_4:50824724-50824743	None:intergenic	25.0%
!!!	CGTTAATCTGATTTATTTTG+AGG	-	chr1_4:50824946-50824965	Msa0168320:CDS	25.0%
!	TTAGAGTTGTATAAGGAATT+TGG	-	chr1_4:50825423-50825442	Msa0168320:intron	25.0%
!!!	GTTTTAGTTGTTGAGTAATT+TGG	-	chr1_4:50825480-50825499	Msa0168320:intron	25.0%
!!	TCTTTTGCATTTGTATCTTT+TGG	-	chr1_4:50825580-50825599	Msa0168320:intron	25.0%
!!	CTTTTGCATTTGTATCTTTT+GGG	-	chr1_4:50825581-50825600	Msa0168320:intron	25.0%
!	CGTTAATCTGATTTATTATG+AGG	-	chr1_4:50825631-50825650	Msa0168320:intron	25.0%
!	AAAGTAATGAATGGATATGA+AGG	+	chr1_4:50824976-50824995	None:intergenic	25.0%
!	ATATACTGTCTTAAATTTGG+GGG	-	chr1_4:50825740-50825759	Msa0168320:intron	25.0%
!	ATATACTGTCTTAAATTTGG+GGG	-	chr1_4:50825740-50825759	Msa0168320:intron	25.0%
!	ACATTTGAACTTAACAGATA+TGG	-	chr1_4:50825822-50825841	Msa0168320:intron	25.0%
!	GTCAAGTTTAATTCAATAAC+AGG	+	chr1_4:50825881-50825900	None:intergenic	25.0%
!	TGTATGATTATGTATCTAAC+CGG	-	chr1_4:50825944-50825963	Msa0168320:intron	25.0%
!	TACCAAATTTGTGTATCATT+GGG	-	chr1_4:50826116-50826135	Msa0168320:CDS	25.0%
!	TTGTATATCCTTACAGAAAA+GGG	-	chr1_4:50826275-50826294	Msa0168320:intron	25.0%
!	AGTTTGCATTGAAAGATAAT+GGG	+	chr1_4:50826561-50826580	None:intergenic	25.0%
!	AAGTTTGCATTGAAAGATAA+TGG	+	chr1_4:50826562-50826581	None:intergenic	25.0%
!!!	CAAACTTTTACTTGTTTTAC+TGG	-	chr1_4:50826575-50826594	Msa0168320:intron	25.0%
!!	TATCAGTGAACTAAAGTTTT+TGG	-	chr1_4:50826646-50826665	Msa0168320:CDS	25.0%
!!	TTGTTTATTGATGAGCTTTT+TGG	-	chr1_4:50826675-50826694	Msa0168320:CDS	25.0%
!	TATTATTGACCATTAAAGCT+TGG	-	chr1_4:50826742-50826761	Msa0168320:intron	25.0%
!	AAAGCTTGGAAAAATTATAG+TGG	-	chr1_4:50826756-50826775	Msa0168320:intron	25.0%
!	AAGCTTGGAAAAATTATAGT+GGG	-	chr1_4:50826757-50826776	Msa0168320:intron	25.0%
!	TTCCAGTAATATCTTTCATT+TGG	+	chr1_4:50826887-50826906	None:intergenic	25.0%
	GAATATGTGAATGATGAAGA+TGG	-	chr1_4:50824896-50824915	Msa0168320:CDS	30.0%
!!	GCACCATTTTCATCATTTTT+AGG	-	chr1_4:50825000-50825019	Msa0168320:CDS	30.0%
!	GGCCAAATGTTGAATATTTT+AGG	-	chr1_4:50825029-50825048	Msa0168320:CDS	30.0%
!!	TAGCATTTTGAAGAAATGTG+AGG	-	chr1_4:50825113-50825132	Msa0168320:CDS	30.0%
	GAAATTAACACAAGTCCTTA+AGG	+	chr1_4:50825219-50825238	None:intergenic	30.0%
!	ATAAGGAATTTGGAGTTTGT+AGG	-	chr1_4:50825433-50825452	Msa0168320:intron	30.0%
	GAAATTGTTTATTTACGGGA+TGG	-	chr1_4:50825502-50825521	Msa0168320:intron	30.0%
	TATACTGTCTTAAATTTGGG+GGG	-	chr1_4:50825741-50825760	Msa0168320:intron	30.0%
	TATACTGTCTTAAATTTGGG+GGG	-	chr1_4:50825741-50825760	Msa0168320:intron	30.0%
	CAAGTTTAATTCAATAGCAG+TGG	-	chr1_4:50826005-50826024	Msa0168320:intron	30.0%
	GTACCAAATTTGTGTATCAT+TGG	-	chr1_4:50826115-50826134	Msa0168320:CDS	30.0%
	AACCCAATGATACACAAATT+TGG	+	chr1_4:50826121-50826140	None:intergenic	30.0%
!!	GTCATCTAATTTGTTGTTTG+AGG	-	chr1_4:50826226-50826245	Msa0168320:intron	30.0%
	CTTGTATATCCTTACAGAAA+AGG	-	chr1_4:50826274-50826293	Msa0168320:intron	30.0%
	CTTAATTTCAACTTGGTTGA+AGG	+	chr1_4:50826406-50826425	None:intergenic	30.0%
	TTTCAGGCTTAATTTCAACT+TGG	+	chr1_4:50826413-50826432	None:intergenic	30.0%
	GAAATTAAGCCTGAAATGAT+TGG	-	chr1_4:50826417-50826436	Msa0168320:intron	30.0%
!	TTTGCATTGAAAGATAATGG+GGG	+	chr1_4:50826559-50826578	None:intergenic	30.0%
	GTTTGCATTGAAAGATAATG+GGG	+	chr1_4:50826560-50826579	None:intergenic	30.0%
	TTTGATATTGTTGTGACACT+AGG	-	chr1_4:50826622-50826641	Msa0168320:CDS	30.0%
	AGTTCATGAATATATACCAG+TGG	+	chr1_4:50826842-50826861	None:intergenic	30.0%
	GGTATATATTCATGAACTAG+AGG	-	chr1_4:50826844-50826863	Msa0168320:exon	30.0%
	GTCCAAATGAAAGATATTAC+TGG	-	chr1_4:50826882-50826901	Msa0168320:five_prime_UTR	30.0%
	GAATATGTGAATGATGAAGA+TGG	-	chr1_4:50824896-50824915	Msa0168320:CDS	30.0%
!!	GCACCATTTTCATCATTTTT+AGG	-	chr1_4:50825000-50825019	Msa0168320:CDS	30.0%
!	GGCCAAATGTTGAATATTTT+AGG	-	chr1_4:50825029-50825048	Msa0168320:CDS	30.0%
!!	TAGCATTTTGAAGAAATGTG+AGG	-	chr1_4:50825113-50825132	Msa0168320:CDS	30.0%
	GAAATTAACACAAGTCCTTA+AGG	+	chr1_4:50825219-50825238	None:intergenic	30.0%
!	ATAAGGAATTTGGAGTTTGT+AGG	-	chr1_4:50825433-50825452	Msa0168320:intron	30.0%
	GAAATTGTTTATTTACGGGA+TGG	-	chr1_4:50825502-50825521	Msa0168320:intron	30.0%
	TATACTGTCTTAAATTTGGG+GGG	-	chr1_4:50825741-50825760	Msa0168320:intron	30.0%
	TATACTGTCTTAAATTTGGG+GGG	-	chr1_4:50825741-50825760	Msa0168320:intron	30.0%
	CAAGTTTAATTCAATAGCAG+TGG	-	chr1_4:50826005-50826024	Msa0168320:intron	30.0%
	GTACCAAATTTGTGTATCAT+TGG	-	chr1_4:50826115-50826134	Msa0168320:CDS	30.0%
	AACCCAATGATACACAAATT+TGG	+	chr1_4:50826121-50826140	None:intergenic	30.0%
!!	GTCATCTAATTTGTTGTTTG+AGG	-	chr1_4:50826226-50826245	Msa0168320:intron	30.0%
	CTTGTATATCCTTACAGAAA+AGG	-	chr1_4:50826274-50826293	Msa0168320:intron	30.0%
	CTTAATTTCAACTTGGTTGA+AGG	+	chr1_4:50826406-50826425	None:intergenic	30.0%
	TTTCAGGCTTAATTTCAACT+TGG	+	chr1_4:50826413-50826432	None:intergenic	30.0%
	GAAATTAAGCCTGAAATGAT+TGG	-	chr1_4:50826417-50826436	Msa0168320:intron	30.0%
!	TTTGCATTGAAAGATAATGG+GGG	+	chr1_4:50826559-50826578	None:intergenic	30.0%
	GTTTGCATTGAAAGATAATG+GGG	+	chr1_4:50826560-50826579	None:intergenic	30.0%
	TTTGATATTGTTGTGACACT+AGG	-	chr1_4:50826622-50826641	Msa0168320:CDS	30.0%
	AGTTCATGAATATATACCAG+TGG	+	chr1_4:50826842-50826861	None:intergenic	30.0%
	GGTATATATTCATGAACTAG+AGG	-	chr1_4:50826844-50826863	Msa0168320:exon	30.0%
	GTCCAAATGAAAGATATTAC+TGG	-	chr1_4:50826882-50826901	Msa0168320:five_prime_UTR	30.0%
	AAGAGAAAGAGATAGAGTTC+GGG	+	chr1_4:50824601-50824620	None:intergenic	35.0%
	GAAGAGAAAGAGATAGAGTT+CGG	+	chr1_4:50824602-50824621	None:intergenic	35.0%
	TTTAAGAAGTTCAGTTTCCG+TGG	-	chr1_4:50824736-50824755	Msa0168320:three_prime_UTR	35.0%
!	GTTCTGTTACTTATAGGATC+AGG	-	chr1_4:50825191-50825210	Msa0168320:intron	35.0%
	TTATAGGATCAGGATCCTTA+AGG	-	chr1_4:50825201-50825220	Msa0168320:intron	35.0%
	TTAGCGCTTAGAGTTGTATA+AGG	-	chr1_4:50825416-50825435	Msa0168320:intron	35.0%
	GGAACAATATGTATCTGTCA+AGG	+	chr1_4:50825860-50825879	None:intergenic	35.0%
	TACCAAATCTGTGTATCATC+AGG	-	chr1_4:50826042-50826061	Msa0168320:intron	35.0%
	AACCTGATGATACACAGATT+TGG	+	chr1_4:50826047-50826066	None:intergenic	35.0%
	CTAGTTTAATTCGATAGCAG+TGG	-	chr1_4:50826079-50826098	Msa0168320:intron	35.0%
!	AGATAATGGCCAATCATTTC+AGG	+	chr1_4:50826429-50826448	None:intergenic	35.0%
!	TGAAATGATTGGCCATTATC+TGG	-	chr1_4:50826428-50826447	Msa0168320:intron	35.0%
	TTGAGAATTCAGCCAGATAA+TGG	+	chr1_4:50826443-50826462	None:intergenic	35.0%
!!	TTGCATTGAAAGATAATGGG+GGG	+	chr1_4:50826558-50826577	None:intergenic	35.0%
	TCACCAGTAAGATTTAAGTG+AGG	+	chr1_4:50826786-50826805	None:intergenic	35.0%
	GGTGAATTCGATAGACAAAT+TGG	-	chr1_4:50826801-50826820	Msa0168320:intron	35.0%
	CAAATTGGATCATGATGCAA+TGG	-	chr1_4:50826816-50826835	Msa0168320:intron	35.0%
	AAGAGAAAGAGATAGAGTTC+GGG	+	chr1_4:50824601-50824620	None:intergenic	35.0%
	GAAGAGAAAGAGATAGAGTT+CGG	+	chr1_4:50824602-50824621	None:intergenic	35.0%
	TTTAAGAAGTTCAGTTTCCG+TGG	-	chr1_4:50824736-50824755	Msa0168320:three_prime_UTR	35.0%
!	GTTCTGTTACTTATAGGATC+AGG	-	chr1_4:50825191-50825210	Msa0168320:intron	35.0%
	TTATAGGATCAGGATCCTTA+AGG	-	chr1_4:50825201-50825220	Msa0168320:intron	35.0%
	TTAGCGCTTAGAGTTGTATA+AGG	-	chr1_4:50825416-50825435	Msa0168320:intron	35.0%
	GGAACAATATGTATCTGTCA+AGG	+	chr1_4:50825860-50825879	None:intergenic	35.0%
	TACCAAATCTGTGTATCATC+AGG	-	chr1_4:50826042-50826061	Msa0168320:intron	35.0%
	AACCTGATGATACACAGATT+TGG	+	chr1_4:50826047-50826066	None:intergenic	35.0%
	CTAGTTTAATTCGATAGCAG+TGG	-	chr1_4:50826079-50826098	Msa0168320:intron	35.0%
!	AGATAATGGCCAATCATTTC+AGG	+	chr1_4:50826429-50826448	None:intergenic	35.0%
!	TGAAATGATTGGCCATTATC+TGG	-	chr1_4:50826428-50826447	Msa0168320:intron	35.0%
	TTGAGAATTCAGCCAGATAA+TGG	+	chr1_4:50826443-50826462	None:intergenic	35.0%
!!	TTGCATTGAAAGATAATGGG+GGG	+	chr1_4:50826558-50826577	None:intergenic	35.0%
	TCACCAGTAAGATTTAAGTG+AGG	+	chr1_4:50826786-50826805	None:intergenic	35.0%
	GGTGAATTCGATAGACAAAT+TGG	-	chr1_4:50826801-50826820	Msa0168320:intron	35.0%
	CAAATTGGATCATGATGCAA+TGG	-	chr1_4:50826816-50826835	Msa0168320:intron	35.0%
	AGCAAGTTTCACTGCAATCA+TGG	-	chr1_4:50824569-50824588	Msa0168320:three_prime_UTR	40.0%
	AAGCTTGACAAGTTCATCAG+TGG	+	chr1_4:50824791-50824810	None:intergenic	40.0%
	GGTGCTCAGAAAGTAATGAA+TGG	+	chr1_4:50824985-50825004	None:intergenic	40.0%
!!	GTTCATTTCAGGTTTCAACG+TGG	-	chr1_4:50825283-50825302	Msa0168320:intron	40.0%
	GGTGCTCAGAAAGTAATGAA+TGG	+	chr1_4:50824985-50825004	None:intergenic	40.0%
	TGTATCTAACCGGTTGTGTT+AGG	-	chr1_4:50825954-50825973	Msa0168320:intron	40.0%
	CAGGCACAATGATCATGTTA+CGG	+	chr1_4:50826344-50826363	None:intergenic	40.0%
	ATCATTGTGCCTGAGATGAT+CGG	-	chr1_4:50826351-50826370	Msa0168320:intron	40.0%
	AGCATCATTGGAGTCTACAA+TGG	-	chr1_4:50826375-50826394	Msa0168320:intron	40.0%
	TCTTACAAGCCTGTTAAGCA+CGG	-	chr1_4:50826465-50826484	Msa0168320:intron	40.0%
	TCACTTCAGAGGAATAAACC+TGG	+	chr1_4:50826520-50826539	None:intergenic	40.0%
	GATGACAATCTTCACTTCAG+AGG	+	chr1_4:50826531-50826550	None:intergenic	40.0%
	CGACCTCACTTAAATCTTAC+TGG	-	chr1_4:50826780-50826799	Msa0168320:intron	40.0%
	CATTTGGACTACACATAGCA+GGG	+	chr1_4:50826871-50826890	None:intergenic	40.0%
	TCATTTGGACTACACATAGC+AGG	+	chr1_4:50826872-50826891	None:intergenic	40.0%
	AGCAAGTTTCACTGCAATCA+TGG	-	chr1_4:50824569-50824588	Msa0168320:three_prime_UTR	40.0%
	AAGCTTGACAAGTTCATCAG+TGG	+	chr1_4:50824791-50824810	None:intergenic	40.0%
	GGTGCTCAGAAAGTAATGAA+TGG	+	chr1_4:50824985-50825004	None:intergenic	40.0%
!!	GTTCATTTCAGGTTTCAACG+TGG	-	chr1_4:50825283-50825302	Msa0168320:intron	40.0%
	GGTGCTCAGAAAGTAATGAA+TGG	+	chr1_4:50824985-50825004	None:intergenic	40.0%
	TGTATCTAACCGGTTGTGTT+AGG	-	chr1_4:50825954-50825973	Msa0168320:intron	40.0%
	CAGGCACAATGATCATGTTA+CGG	+	chr1_4:50826344-50826363	None:intergenic	40.0%
	ATCATTGTGCCTGAGATGAT+CGG	-	chr1_4:50826351-50826370	Msa0168320:intron	40.0%
	AGCATCATTGGAGTCTACAA+TGG	-	chr1_4:50826375-50826394	Msa0168320:intron	40.0%
	TCTTACAAGCCTGTTAAGCA+CGG	-	chr1_4:50826465-50826484	Msa0168320:intron	40.0%
	TCACTTCAGAGGAATAAACC+TGG	+	chr1_4:50826520-50826539	None:intergenic	40.0%
	GATGACAATCTTCACTTCAG+AGG	+	chr1_4:50826531-50826550	None:intergenic	40.0%
	CGACCTCACTTAAATCTTAC+TGG	-	chr1_4:50826780-50826799	Msa0168320:intron	40.0%
	CATTTGGACTACACATAGCA+GGG	+	chr1_4:50826871-50826890	None:intergenic	40.0%
	TCATTTGGACTACACATAGC+AGG	+	chr1_4:50826872-50826891	None:intergenic	40.0%
	TCACCTCTCAAGGATTGCTA+GGG	+	chr1_4:50824521-50824540	None:intergenic	45.0%
	TGTTGATCTCGATGCTCTCT+TGG	-	chr1_4:50824759-50824778	Msa0168320:three_prime_UTR	45.0%
	AGCTTCTTGATGAGTGCCAT+AGG	+	chr1_4:50825322-50825341	None:intergenic	45.0%
	ACAGCATTGCCTAACACAAC+CGG	+	chr1_4:50825966-50825985	None:intergenic	45.0%
!	TGGAGCTTCCCTTTTCTGTA+AGG	+	chr1_4:50826286-50826305	None:intergenic	45.0%
	GCACAATGATCATGTTACGG+AGG	+	chr1_4:50826341-50826360	None:intergenic	45.0%
	ATGATGCTACCGATCATCTC+AGG	+	chr1_4:50826363-50826382	None:intergenic	45.0%
	GAGATGATCGGTAGCATCAT+TGG	-	chr1_4:50826363-50826382	Msa0168320:intron	45.0%
	CTTCAGAGGAATAAACCTGG+AGG	+	chr1_4:50826517-50826536	None:intergenic	45.0%
	TCACCTCTCAAGGATTGCTA+GGG	+	chr1_4:50824521-50824540	None:intergenic	45.0%
	TGTTGATCTCGATGCTCTCT+TGG	-	chr1_4:50824759-50824778	Msa0168320:three_prime_UTR	45.0%
	AGCTTCTTGATGAGTGCCAT+AGG	+	chr1_4:50825322-50825341	None:intergenic	45.0%
	ACAGCATTGCCTAACACAAC+CGG	+	chr1_4:50825966-50825985	None:intergenic	45.0%
!	TGGAGCTTCCCTTTTCTGTA+AGG	+	chr1_4:50826286-50826305	None:intergenic	45.0%
	GCACAATGATCATGTTACGG+AGG	+	chr1_4:50826341-50826360	None:intergenic	45.0%
	ATGATGCTACCGATCATCTC+AGG	+	chr1_4:50826363-50826382	None:intergenic	45.0%
	GAGATGATCGGTAGCATCAT+TGG	-	chr1_4:50826363-50826382	Msa0168320:intron	45.0%
	CTTCAGAGGAATAAACCTGG+AGG	+	chr1_4:50826517-50826536	None:intergenic	45.0%
	GAACCCTAGCAATCCTTGAG+AGG	-	chr1_4:50824515-50824534	Msa0168320:three_prime_UTR	50.0%
	CTCACCTCTCAAGGATTGCT+AGG	+	chr1_4:50824522-50824541	None:intergenic	50.0%
!	GCAGTGAAACTTGCTCGATC+TGG	+	chr1_4:50824564-50824583	None:intergenic	50.0%
!!	GAGCATCGAGATCAACACCA+CGG	+	chr1_4:50824756-50824775	None:intergenic	50.0%
	TGATGAGTGCCATAGGCTTG+CGG	+	chr1_4:50825315-50825334	None:intergenic	50.0%
	ACTCATCAAGAAGCTCCGCA+AGG	-	chr1_4:50825327-50825346	Msa0168320:intron	50.0%
	ACAGATAACTCACCGCCTTG+CGG	+	chr1_4:50825345-50825364	None:intergenic	50.0%
	ACAGAAAAGGGAAGCTCCAC+CGG	-	chr1_4:50826287-50826306	Msa0168320:intron	50.0%
	ACAAGCCTGTTAAGCACGGT+AGG	-	chr1_4:50826469-50826488	Msa0168320:intron	50.0%
	GAGTGAGTAGCACCAATACC+AGG	+	chr1_4:50826495-50826514	None:intergenic	50.0%
	GATCATGATGCAATGGCCAC+TGG	-	chr1_4:50826823-50826842	Msa0168320:intron	50.0%
	GAACCCTAGCAATCCTTGAG+AGG	-	chr1_4:50824515-50824534	Msa0168320:three_prime_UTR	50.0%
	CTCACCTCTCAAGGATTGCT+AGG	+	chr1_4:50824522-50824541	None:intergenic	50.0%
!	GCAGTGAAACTTGCTCGATC+TGG	+	chr1_4:50824564-50824583	None:intergenic	50.0%
!!	GAGCATCGAGATCAACACCA+CGG	+	chr1_4:50824756-50824775	None:intergenic	50.0%
	TGATGAGTGCCATAGGCTTG+CGG	+	chr1_4:50825315-50825334	None:intergenic	50.0%
	ACTCATCAAGAAGCTCCGCA+AGG	-	chr1_4:50825327-50825346	Msa0168320:intron	50.0%
	ACAGATAACTCACCGCCTTG+CGG	+	chr1_4:50825345-50825364	None:intergenic	50.0%
	ACAGAAAAGGGAAGCTCCAC+CGG	-	chr1_4:50826287-50826306	Msa0168320:intron	50.0%
	ACAAGCCTGTTAAGCACGGT+AGG	-	chr1_4:50826469-50826488	Msa0168320:intron	50.0%
	GAGTGAGTAGCACCAATACC+AGG	+	chr1_4:50826495-50826514	None:intergenic	50.0%
	GATCATGATGCAATGGCCAC+TGG	-	chr1_4:50826823-50826842	Msa0168320:intron	50.0%
!!	CTCGATCTGGTTCTTGCTCG+CGG	+	chr1_4:50824551-50824570	None:intergenic	55.0%
	TCAGGCGGATGTTGAACCAG+AGG	-	chr1_4:50824681-50824700	Msa0168320:three_prime_UTR	55.0%
	GAACCAGAGGTAGCTGCACA+AGG	-	chr1_4:50824694-50824713	Msa0168320:three_prime_UTR	55.0%
	ACTCCTTGTGCAGCTACCTC+TGG	+	chr1_4:50824700-50824719	None:intergenic	55.0%
	TCTCTGCTCGTGCACGTAGA+AGG	-	chr1_4:50824812-50824831	Msa0168320:three_prime_UTR	55.0%
	TGGTTTGACCCGCAAGCCTA+TGG	-	chr1_4:50825303-50825322	Msa0168320:intron	55.0%
	GATGAGTGCCATAGGCTTGC+GGG	+	chr1_4:50825314-50825333	None:intergenic	55.0%
	CATCAAGAAGCTCCGCAAGG+CGG	-	chr1_4:50825330-50825349	Msa0168320:intron	55.0%
	CAGAAAAGGGAAGCTCCACC+GGG	-	chr1_4:50826288-50826307	Msa0168320:intron	55.0%
!!	ACTGGTTCTGGCTTCTCACC+CGG	+	chr1_4:50826309-50826328	None:intergenic	55.0%
	GTGAGAAGCCAGAACCAGTG+AGG	-	chr1_4:50826310-50826329	Msa0168320:intron	55.0%
!!	AGGTGAGTCCTCACTGGTTC+TGG	+	chr1_4:50826321-50826340	None:intergenic	55.0%
	TTACGGAGGTGAGTCCTCAC+TGG	+	chr1_4:50826327-50826346	None:intergenic	55.0%
	AAGCACGGTAGGCCTGGTAT+TGG	-	chr1_4:50826480-50826499	Msa0168320:intron	55.0%
!!	TTGGTGCTACTCACTCCTCC+AGG	-	chr1_4:50826499-50826518	Msa0168320:intron	55.0%
!!	CTCGATCTGGTTCTTGCTCG+CGG	+	chr1_4:50824551-50824570	None:intergenic	55.0%
	TCAGGCGGATGTTGAACCAG+AGG	-	chr1_4:50824681-50824700	Msa0168320:three_prime_UTR	55.0%
	GAACCAGAGGTAGCTGCACA+AGG	-	chr1_4:50824694-50824713	Msa0168320:three_prime_UTR	55.0%
	ACTCCTTGTGCAGCTACCTC+TGG	+	chr1_4:50824700-50824719	None:intergenic	55.0%
	TCTCTGCTCGTGCACGTAGA+AGG	-	chr1_4:50824812-50824831	Msa0168320:three_prime_UTR	55.0%
	TGGTTTGACCCGCAAGCCTA+TGG	-	chr1_4:50825303-50825322	Msa0168320:intron	55.0%
	GATGAGTGCCATAGGCTTGC+GGG	+	chr1_4:50825314-50825333	None:intergenic	55.0%
	CATCAAGAAGCTCCGCAAGG+CGG	-	chr1_4:50825330-50825349	Msa0168320:intron	55.0%
	CAGAAAAGGGAAGCTCCACC+GGG	-	chr1_4:50826288-50826307	Msa0168320:intron	55.0%
!!	ACTGGTTCTGGCTTCTCACC+CGG	+	chr1_4:50826309-50826328	None:intergenic	55.0%
	GTGAGAAGCCAGAACCAGTG+AGG	-	chr1_4:50826310-50826329	Msa0168320:intron	55.0%
!!	AGGTGAGTCCTCACTGGTTC+TGG	+	chr1_4:50826321-50826340	None:intergenic	55.0%
	TTACGGAGGTGAGTCCTCAC+TGG	+	chr1_4:50826327-50826346	None:intergenic	55.0%
	AAGCACGGTAGGCCTGGTAT+TGG	-	chr1_4:50826480-50826499	Msa0168320:intron	55.0%
!!	TTGGTGCTACTCACTCCTCC+AGG	-	chr1_4:50826499-50826518	Msa0168320:intron	55.0%
	CGGCTGCTTCTCACCTCTCA+AGG	+	chr1_4:50824531-50824550	None:intergenic	60.0%
	CCAGGCCTACCGTGCTTAAC+AGG	+	chr1_4:50826477-50826496	None:intergenic	60.0%
	CCTGTTAAGCACGGTAGGCC+TGG	-	chr1_4:50826474-50826493	Msa0168320:intron	60.0%
	CGGCTGCTTCTCACCTCTCA+AGG	+	chr1_4:50824531-50824550	None:intergenic	60.0%
	CCAGGCCTACCGTGCTTAAC+AGG	+	chr1_4:50826477-50826496	None:intergenic	60.0%
	CCTGTTAAGCACGGTAGGCC+TGG	-	chr1_4:50826474-50826493	Msa0168320:intron	60.0%
!!	GGTTCTGGCTTCTCACCCGG+TGG	+	chr1_4:50826306-50826325	None:intergenic	65.0%
!!	GGTTCTGGCTTCTCACCCGG+TGG	+	chr1_4:50826306-50826325	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	50824505	50826929	50824505	ID=Msa0168320;Name=Msa0168320
chr1_4	mRNA	50824505	50826929	50824505	ID=Msa0168320-mRNA-1;Parent=Msa0168320;Name=Msa0168320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=83\|1\|1\|1\|0.75\|0.6\|5\|370\|152
chr1_4	exon	50824505	50824589	50824505	ID=Msa0168320-mRNA-1:exon:14954;Parent=Msa0168320-mRNA-1
chr1_4	exon	50824610	50825143	50824610	ID=Msa0168320-mRNA-1:exon:14953;Parent=Msa0168320-mRNA-1
chr1_4	exon	50826083	50826140	50826083	ID=Msa0168320-mRNA-1:exon:14952;Parent=Msa0168320-mRNA-1
chr1_4	exon	50826601	50826749	50826601	ID=Msa0168320-mRNA-1:exon:14951;Parent=Msa0168320-mRNA-1
chr1_4	exon	50826844	50826929	50826844	ID=Msa0168320-mRNA-1:exon:14950;Parent=Msa0168320-mRNA-1
chr1_4	five_prime_UTR	50826847	50826929	50826847	ID=Msa0168320-mRNA-1:five_prime_utr;Parent=Msa0168320-mRNA-1
chr1_4	CDS	50826844	50826846	50826844	ID=Msa0168320-mRNA-1:cds;Parent=Msa0168320-mRNA-1
chr1_4	CDS	50826601	50826749	50826601	ID=Msa0168320-mRNA-1:cds;Parent=Msa0168320-mRNA-1
chr1_4	CDS	50826083	50826140	50826083	ID=Msa0168320-mRNA-1:cds;Parent=Msa0168320-mRNA-1
chr1_4	CDS	50824895	50825143	50824895	ID=Msa0168320-mRNA-1:cds;Parent=Msa0168320-mRNA-1
chr1_4	three_prime_UTR	50824610	50824894	50824610	ID=Msa0168320-mRNA-1:three_prime_utr;Parent=Msa0168320-mRNA-1
chr1_4	three_prime_UTR	50824505	50824589	50824505	ID=Msa0168320-mRNA-1:three_prime_utr;Parent=Msa0168320-mRNA-1

Gene Sequence

>Msa0168320

ATGGCGGATGTTGAACCAGAGGTAGCTGCACAAGGAGTGCCAAAGAAGAGAACATTTAAGAAGTTCAGTTTCCGTGGTGTTGATCTCGATGCTCTCTTGGATATGTCCACTGATGAACTTGTCAAGCTTTTCTCTGCTCGTGCACGTAGAAGGTTTCAACGTGGTTTGACCCGCAAGCCTATGGCACTCATCAAGAAGCTCCGCAAGGCGAAAAGGGAAGCTCCACCGGGTGAGAAGCCAGAACCAGTGAGGACTCACCTCCGTAACATGATCATTGTGCCTGAGATGATCGGTAGCATCATTGGAGTCTACAATGGAAAGACCTTCAACCAAGTTGAAATTAAGCCTGAAATGATTGGCCATTATCTGGCTGAATTCTCAATCTCTTACAAGCCTGTTAAGCACGGTAGGCCTGGTATTGGTGCTACTCACTCCTCCAGGTTTATTCCTCTGAAGTGA

Protein sequence

>Msa0168320

MADVEPEVAAQGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*