AlfalfaGEDB | Msa0438960

M. sativa cultivar zhongmu-4 / Msa0438960

KEGG: -
GO: GO:0000313 GO:0000315 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005761 GO:0005762 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0019538 GO:0031974 GO:0032543 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071704 GO:0097159 GO:0098798 GO:0140053 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF03947.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0438960	AES63964.2	97.449	196	5	0	1	196	1	196	2.70e-138	394

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0438960	sp\|P92812\|RM02_ORYSJ	62.821	156	51	3	35	190	346	494	3.01e-55	185

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0438960	G7IK82	97.449	196	5	0	1	196	1	196	1.29e-138	394

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0027590	Msa0438960	0.804218	2.400946e-49	-8.615850e-47
Msa0040220	Msa0438960	0.804703	1.901812e-49	-8.615850e-47
Msa0087910	Msa0438960	0.815310	9.869078e-52	-8.615850e-47
Msa0191450	Msa0438960	0.806538	7.837406e-50	-8.615850e-47
Msa0191550	Msa0438960	0.809803	1.579770e-50	-8.615850e-47
Msa0194940	Msa0438960	0.853809	1.869568e-61	-8.615850e-47
Msa0210360	Msa0438960	0.809024	2.321434e-50	-8.615850e-47
Msa0234850	Msa0438960	0.810921	9.062334e-51	-8.615850e-47
Msa0426090	Msa0438960	0.806532	7.859016e-50	-8.615850e-47
Msa0426250	Msa0438960	0.826935	2.064975e-54	-8.615850e-47
Msa0438960	Msa0481520	0.825477	4.589655e-54	-8.615850e-47
Msa0438960	Msa0529900	0.822325	2.516499e-53	-8.615850e-47
Msa0438960	Msa0573550	0.804890	1.738737e-49	-8.615850e-47
Msa0438960	Msa0579830	0.813385	2.628802e-51	-8.615850e-47
Msa0438960	Msa0622230	0.826821	2.198627e-54	-8.615850e-47
Msa0438960	Msa0649890	0.803602	3.222799e-49	-8.615850e-47
Msa0438960	Msa0748350	0.834054	3.740751e-56	-8.615850e-47
Msa0438960	Msa0788380	0.830653	2.601581e-55	-8.615850e-47
Msa0438960	Msa1037290	0.817118	3.892875e-52	-8.615850e-47
Msa0438960	Msa1126520	0.808519	2.975709e-50	-8.615850e-47
Msa0438960	Msa1164150	0.827400	1.597728e-54	-8.615850e-47
Msa0438960	Msa1165640	0.829819	4.157711e-55	-8.615850e-47
Msa0438960	Msa1166570	0.800053	1.725892e-48	-8.615850e-47
Msa0438960	Msa1258540	0.826722	2.321457e-54	-8.615850e-47
Msa0438960	Msa1311400	0.820697	5.981131e-53	-8.615850e-47
Msa0438960	Msa1368920	0.818763	1.653992e-52	-8.615850e-47
Msa0438960	Msa1446410	0.839340	1.680620e-57	-8.615850e-47
Msa0313520	Msa0438960	0.988724	3.717200e-175	-8.615850e-47
Msa0315430	Msa0438960	0.833554	4.990351e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0438960	MtrunA17_Chr2g0283311	97.110	173	5	0	1	173	1	173	1.11e-124	350
Msa0438960	MtrunA17_CPg0492514	50.000	142	65	3	45	185	107	243	1.63e-36	128
Msa0438960	MtrunA17_Chr3g0090924	50.000	142	65	3	45	185	107	243	1.63e-36	128
Msa0438960	MtrunA17_Chr4g0015984	50.000	142	65	3	45	185	107	243	1.63e-36	128
Msa0438960	MtrunA17_Chr3g0094604	50.000	142	65	3	45	185	107	243	1.78e-36	127
Msa0438960	MtrunA17_Chr4g0017184	51.220	123	57	2	45	166	114	234	6.38e-34	121
Msa0438960	MtrunA17_Chr8g0389571	51.648	91	41	2	76	165	2	90	3.08e-20	81.3
Msa0438960	MtrunA17_Chr7g0247311	40.171	117	64	3	51	161	98	214	1.14e-18	81.3
Msa0438960	MtrunA17_Chr5g0405281	38.462	117	66	3	51	161	98	214	5.85e-18	79.3
Msa0438960	MtrunA17_Chr4g0024444	47.436	78	38	2	45	121	107	182	1.37e-13	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0438960	AT2G44065.3	63.265	196	68	3	1	192	5	200	9.34e-81	239
Msa0438960	AT2G44065.1	63.265	196	68	3	1	192	5	200	9.34e-81	239
Msa0438960	AT2G44065.2	63.265	196	68	3	1	192	5	200	9.34e-81	239
Msa0438960	ATCG01310.1	49.296	142	66	3	45	185	118	254	8.19e-35	124
Msa0438960	ATCG00830.1	49.296	142	66	3	45	185	118	254	8.19e-35	124
Msa0438960	AT3G51190.1	44.167	120	61	3	48	161	96	215	5.85e-23	92.8
Msa0438960	AT2G18020.1	40.171	117	64	3	51	161	98	214	2.35e-19	83.2
Msa0438960	AT4G36130.1	39.316	117	65	3	51	161	98	214	1.74e-18	80.9

Find 95 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATTCTATAATATTGTTAT+TGG	0.174644	3_3:-3758269	Msa0438960:three_prime_UTR
ATCAGGAAAATACATTAATT+TGG	0.192474	3_3:+3758235	None:intergenic
CAATCGGAGACCGGTTGTTC+GGG	0.303224	3_3:-3758827	Msa0438960:CDS
GAAAGGTTCCCGCACTCCTT+GGG	0.303625	3_3:-3758731	Msa0438960:CDS
GGTTTGTATCAGACACAAAT+TGG	0.317520	3_3:-3759987	Msa0438960:five_prime_UTR
GGCAAGGTGGAAAGCTTGTT+CGG	0.328555	3_3:-3759026	Msa0438960:CDS
AACCCATATAATCCACAAAA+TGG	0.332877	3_3:+3758516	None:intergenic
GGAAAGGTTCCCGCACTCCT+TGG	0.342701	3_3:-3758732	Msa0438960:CDS
TCAATCGGAGACCGGTTGTT+CGG	0.360479	3_3:-3758828	Msa0438960:CDS
ACAAGCTTTCCACCTTGCCC+TGG	0.376766	3_3:+3759030	None:intergenic
GCTCTTCGCCGTTTCTCTAC+TGG	0.378938	3_3:-3759544	Msa0438960:intron
CTCAGCAGCTCCATCGACTT+TGG	0.379908	3_3:-3760008	None:intergenic
CCTCTCTCTTCAATGCGAAT+TGG	0.385769	3_3:-3759081	Msa0438960:CDS
CCCAATCTGTGAGTTTATAT+CGG	0.390437	3_3:+3759113	None:intergenic
TAACAATTCTACTTCTATCA+TGG	0.397475	3_3:-3758555	Msa0438960:three_prime_UTR
CTTCTATCATGGAATTGCTT+AGG	0.401842	3_3:-3758544	Msa0438960:three_prime_UTR
CTCTTTCAAGATCTTTGCAT+TGG	0.403607	3_3:+3758993	None:intergenic
CAAAACTGCACTCTACTTGC+CGG	0.414801	3_3:-3759959	Msa0438960:five_prime_UTR
GGAAAGCTTGTTCGGGCAGC+TGG	0.433411	3_3:-3759018	Msa0438960:CDS
CCACCATGAGGATGATCAAC+AGG	0.434719	3_3:+3758790	None:intergenic
TCCGATATAAACTCACAGAT+TGG	0.434854	3_3:-3759114	Msa0438960:CDS
GTTAACTTTCACACAATTTG+TGG	0.435149	3_3:+3759907	None:intergenic
ATCATGGAATTGCTTAGGTT+CGG	0.437562	3_3:-3758539	Msa0438960:three_prime_UTR
GCAAGAGTAGTGGTGGGTGG+GGG	0.456389	3_3:-3758753	Msa0438960:CDS
ATACCATATAAAAGACAATC+AGG	0.458444	3_3:+3758218	None:intergenic
GCAAGGTGGAAAGCTTGTTC+GGG	0.464379	3_3:-3759025	Msa0438960:CDS
TCCTTGGGGTAAGCCAACTA+AGG	0.465838	3_3:-3758716	Msa0438960:CDS
CAAGCTTTCCACCTTGCCCT+GGG	0.466095	3_3:+3759031	None:intergenic
AGCAAGAGTAGTGGTGGGTG+GGG	0.467612	3_3:-3758754	Msa0438960:CDS
GTCATAGCAGATGGCTCAAT+CGG	0.474048	3_3:-3758843	Msa0438960:CDS
GTCTTGAAACCACCCTTAGT+TGG	0.475603	3_3:+3758703	None:intergenic
ATAGCCACACCCCGAACAAC+CGG	0.484023	3_3:+3758817	None:intergenic
GAGCAAGAGTAGTGGTGGGT+GGG	0.491341	3_3:-3758755	Msa0438960:CDS
CCGATATAAACTCACAGATT+GGG	0.494054	3_3:-3759113	Msa0438960:CDS
ACCTACTTTCTGCGCTTAAG+AGG	0.496195	3_3:+3758676	None:intergenic
AGCGCAGAAAGTAGGTTAGT+AGG	0.498964	3_3:-3758669	Msa0438960:exon
GTATTTGTACAGACGAGGAC+AGG	0.499264	3_3:-3758347	Msa0438960:three_prime_UTR
GACTAAAACGTATGCTGATG+TGG	0.504252	3_3:+3758969	None:intergenic
ACTAAGGGTGGTTTCAAGAC+TGG	0.508103	3_3:-3758700	Msa0438960:CDS
CATCCTCATGGTGGAGGAGA+GGG	0.510436	3_3:-3758781	Msa0438960:CDS
GGCAAGAGCAAGAGTAGTGG+TGG	0.514209	3_3:-3758760	Msa0438960:CDS
ATGGAGTTGTATAAGCTGAA+TGG	0.517250	3_3:+3758418	None:intergenic
GGTTTCAAACGGTATTCCTC+AGG	0.517827	3_3:-3759160	Msa0438960:CDS
AGAGAAACGGCGAAGAGCAT+TGG	0.520863	3_3:+3759549	None:intergenic
CACAACATTGAGCTGAACCC+AGG	0.522651	3_3:-3759048	Msa0438960:CDS
AGCTTGCGATCACCGTGAGT+TGG	0.524709	3_3:+3758877	None:intergenic
CCCTTAGTTGGCTTACCCCA+AGG	0.529403	3_3:+3758715	None:intergenic
CGGTGATCGCAAGCTTAAGA+AGG	0.531996	3_3:-3758869	Msa0438960:CDS
TGGCTTACCCCAAGGAGTGC+GGG	0.536501	3_3:+3758723	None:intergenic
AGTTGATTGATACTCGATGC+AGG	0.537593	3_3:-3758924	Msa0438960:CDS
TACTTGCCGGAAAACGCAGC+CGG	0.540666	3_3:-3759946	Msa0438960:five_prime_UTR
GAGACCGGTTGTTCGGGGTG+TGG	0.544072	3_3:-3758821	Msa0438960:CDS
GTATAAGCTGAATGGAAGTC+CGG	0.544743	3_3:+3758426	None:intergenic
TGAGAGTACCAGTAGAGAAA+CGG	0.550395	3_3:+3759536	None:intergenic
ATCCTCTCGCGTGCCTCCTG+AGG	0.558960	3_3:+3759144	None:intergenic
TTGAGCATCTATAATATTCG+CGG	0.567170	3_3:+3758298	None:intergenic
AGAGCAAGAGTAGTGGTGGG+TGG	0.571408	3_3:-3758756	Msa0438960:CDS
CAGATGGCTCAATCGGAGAC+CGG	0.579156	3_3:-3758836	Msa0438960:CDS
GATCGCAAGCTTAAGAAGGC+TGG	0.579493	3_3:-3758865	Msa0438960:CDS
AAAGGTTCCCGCACTCCTTG+GGG	0.579787	3_3:-3758730	Msa0438960:CDS
GTTGATCATCCTCATGGTGG+AGG	0.581691	3_3:-3758787	Msa0438960:CDS
ACGCAGCCGGAGTTGCGAGT+TGG	0.589271	3_3:-3759933	Msa0438960:five_prime_UTR
AGAAGGCTGGTCATAGCAGA+TGG	0.589752	3_3:-3758852	Msa0438960:CDS
ATTGAGCTGAACCCAGGGCA+AGG	0.590026	3_3:-3759042	Msa0438960:CDS
ACCTCTTAAGCGCAGAAAGT+AGG	0.597433	3_3:-3758677	Msa0438960:exon
AACTTTCACACAATTTGTGG+CGG	0.599041	3_3:+3759910	None:intergenic
TGGCGGCCAACTCGCAACTC+CGG	0.601606	3_3:+3759927	None:intergenic
CCAATTCGCATTGAAGAGAG+AGG	0.603282	3_3:+3759081	None:intergenic
TGGGGTAAGCCAACTAAGGG+TGG	0.604152	3_3:-3758712	Msa0438960:CDS
CTGATACAAACCAAAGTCGA+TGG	0.606461	3_3:+3759998	None:intergenic
AATCGGAGACCGGTTGTTCG+GGG	0.609554	3_3:-3758826	Msa0438960:CDS
ACAACATTGAGCTGAACCCA+GGG	0.610164	3_3:-3759047	Msa0438960:CDS
GAGGGCAAGAGCAAGAGTAG+TGG	0.611159	3_3:-3758763	Msa0438960:CDS
TCATCCTCATGGTGGAGGAG+AGG	0.611896	3_3:-3758782	Msa0438960:CDS
TTGGCTTACCCCAAGGAGTG+CGG	0.612529	3_3:+3758722	None:intergenic
TTCAAACGGTATTCCTCAGG+AGG	0.616156	3_3:-3759157	Msa0438960:CDS
TTGCCCTCTCCTCCACCATG+AGG	0.616499	3_3:+3758778	None:intergenic
CCTTGGGGTAAGCCAACTAA+GGG	0.618496	3_3:-3758715	Msa0438960:CDS
AAATTGTGTGAAAGTTAACA+AGG	0.619962	3_3:-3759903	Msa0438960:intron
TATTTGTACAGACGAGGACA+GGG	0.623030	3_3:-3758346	Msa0438960:three_prime_UTR
AATCCTGTTGATCATCCTCA+TGG	0.627342	3_3:-3758793	Msa0438960:CDS
AATGGAAGTCCGGTTCGCAA+AGG	0.628791	3_3:+3758436	None:intergenic
ACTCGATGCAGGGCCACTGT+CGG	0.629111	3_3:-3758913	Msa0438960:CDS
GTTGATTGATACTCGATGCA+GGG	0.629838	3_3:-3758923	Msa0438960:CDS
GCAAGAGCAAGAGTAGTGGT+GGG	0.633900	3_3:-3758759	Msa0438960:CDS
TTCCTCAGGAGGCACGCGAG+AGG	0.634562	3_3:-3759146	Msa0438960:CDS
AGCATCTATAATATTCGCGG+AGG	0.658868	3_3:+3758301	None:intergenic
ACTAAAACGTATGCTGATGT+GGG	0.662637	3_3:+3758970	None:intergenic
AGTTTGTATTTGTACAGACG+AGG	0.665855	3_3:-3758352	Msa0438960:three_prime_UTR
AAACTACATAAAGTGAACAA+TGG	0.674895	3_3:+3758399	None:intergenic
CCTGTTGATCATCCTCATGG+TGG	0.678152	3_3:-3758790	Msa0438960:CDS
ACTGTCTCTAATCCAACTCA+CGG	0.682936	3_3:-3758889	Msa0438960:CDS
ATTATTACAAAACATCTCAG+AGG	0.698318	3_3:+3758591	None:intergenic
GAGCTGAACCCAGGGCAAGG+TGG	0.703850	3_3:-3759039	Msa0438960:CDS
ATTAGAGACAGTACCGACAG+TGG	0.717055	3_3:+3758900	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTGTATATGAATTTTTTT+TGG	-	chr3_3:3758542-3758561	Msa0438960:three_prime_UTR	10.0%
!!!	TATTGTATATGAATTTTTTT+TGG	-	chr3_3:3758542-3758561	Msa0438960:three_prime_UTR	10.0%
!!	TAAATTCAATTCATTGAAAA+TGG	+	chr3_3:3758442-3758461	None:intergenic	15.0%
!!	GAATTCTATAATATTGTTAT+TGG	-	chr3_3:3759938-3759957	Msa0438960:five_prime_UTR	15.0%
!!	TAAATTCAATTCATTGAAAA+TGG	+	chr3_3:3758442-3758461	None:intergenic	15.0%
!!	GAATTCTATAATATTGTTAT+TGG	-	chr3_3:3759938-3759957	Msa0438960:five_prime_UTR	15.0%
!!	TTCATTGAAAATGGTAATTA+GGG	+	chr3_3:3758433-3758452	None:intergenic	20.0%
!!	ATTCATTGAAAATGGTAATT+AGG	+	chr3_3:3758434-3758453	None:intergenic	20.0%
!!	AAACATGATGAAAAAAAATG+AGG	+	chr3_3:3758498-3758517	None:intergenic	20.0%
!!	ATGAATATTGATCTAAACAT+TGG	+	chr3_3:3758734-3758753	None:intergenic	20.0%
!!	TGAAATAAATTATGTAGCTT+TGG	-	chr3_3:3758783-3758802	Msa0438960:CDS	20.0%
!!	GAAATAAATTATGTAGCTTT+GGG	-	chr3_3:3758784-3758803	Msa0438960:CDS	20.0%
!!!	AAATAAATTATGTAGCTTTG+GGG	-	chr3_3:3758785-3758804	Msa0438960:CDS	20.0%
!!!	CTAGTTGAATCATTTAATTT+CGG	-	chr3_3:3758967-3758986	Msa0438960:CDS	20.0%
!!	ATCAGGAAAATACATTAATT+TGG	+	chr3_3:3759975-3759994	None:intergenic	20.0%
!!	TTCATTGAAAATGGTAATTA+GGG	+	chr3_3:3758433-3758452	None:intergenic	20.0%
!!	ATTCATTGAAAATGGTAATT+AGG	+	chr3_3:3758434-3758453	None:intergenic	20.0%
!!	AAACATGATGAAAAAAAATG+AGG	+	chr3_3:3758498-3758517	None:intergenic	20.0%
!!	ATGAATATTGATCTAAACAT+TGG	+	chr3_3:3758734-3758753	None:intergenic	20.0%
!!	TGAAATAAATTATGTAGCTT+TGG	-	chr3_3:3758783-3758802	Msa0438960:CDS	20.0%
!!	GAAATAAATTATGTAGCTTT+GGG	-	chr3_3:3758784-3758803	Msa0438960:CDS	20.0%
!!!	AAATAAATTATGTAGCTTTG+GGG	-	chr3_3:3758785-3758804	Msa0438960:CDS	20.0%
!!!	CTAGTTGAATCATTTAATTT+CGG	-	chr3_3:3758967-3758986	Msa0438960:CDS	20.0%
!!	ATCAGGAAAATACATTAATT+TGG	+	chr3_3:3759975-3759994	None:intergenic	20.0%
!	AAATTGTGTGAAAGTTAACA+AGG	-	chr3_3:3758304-3758323	Msa0438960:three_prime_UTR	25.0%
!!!	TAGACAGTTTTTTGTATGAA+TGG	-	chr3_3:3758584-3758603	Msa0438960:three_prime_UTR	25.0%
!!	AAAGATTTTTACTACAGTGA+AGG	+	chr3_3:3759581-3759600	None:intergenic	25.0%
!	ATTATTACAAAACATCTCAG+AGG	+	chr3_3:3759619-3759638	None:intergenic	25.0%
!!	GAGATGTTTTGTAATAATTG+TGG	-	chr3_3:3759621-3759640	Msa0438960:intron	25.0%
!	TAACAATTCTACTTCTATCA+TGG	-	chr3_3:3759652-3759671	Msa0438960:intron	25.0%
!	AAACTACATAAAGTGAACAA+TGG	+	chr3_3:3759811-3759830	None:intergenic	25.0%
!!	TTTCCTGATTGTCTTTTATA+TGG	-	chr3_3:3759986-3760005	Msa0438960:five_prime_UTR	25.0%
!	ATACCATATAAAAGACAATC+AGG	+	chr3_3:3759992-3760011	None:intergenic	25.0%
!	AAATTGTGTGAAAGTTAACA+AGG	-	chr3_3:3758304-3758323	Msa0438960:three_prime_UTR	25.0%
!!!	TAGACAGTTTTTTGTATGAA+TGG	-	chr3_3:3758584-3758603	Msa0438960:three_prime_UTR	25.0%
!!	AAAGATTTTTACTACAGTGA+AGG	+	chr3_3:3759581-3759600	None:intergenic	25.0%
!	ATTATTACAAAACATCTCAG+AGG	+	chr3_3:3759619-3759638	None:intergenic	25.0%
!!	GAGATGTTTTGTAATAATTG+TGG	-	chr3_3:3759621-3759640	Msa0438960:intron	25.0%
!	TAACAATTCTACTTCTATCA+TGG	-	chr3_3:3759652-3759671	Msa0438960:intron	25.0%
!	AAACTACATAAAGTGAACAA+TGG	+	chr3_3:3759811-3759830	None:intergenic	25.0%
!!	TTTCCTGATTGTCTTTTATA+TGG	-	chr3_3:3759986-3760005	Msa0438960:five_prime_UTR	25.0%
!	ATACCATATAAAAGACAATC+AGG	+	chr3_3:3759992-3760011	None:intergenic	25.0%
	GTTAACTTTCACACAATTTG+TGG	+	chr3_3:3758303-3758322	None:intergenic	30.0%
	TGTGAAAGTTAACAAGGTTT+GGG	-	chr3_3:3758310-3758329	Msa0438960:three_prime_UTR	30.0%
!!	CATTTTGTTTCATAGATCTG+TGG	-	chr3_3:3758333-3758352	Msa0438960:three_prime_UTR	30.0%
!	CTGCTTTAAACTACTTGATT+TGG	-	chr3_3:3758883-3758902	Msa0438960:CDS	30.0%
!	TGAATCATTTAATTTCGGCT+CGG	-	chr3_3:3758972-3758991	Msa0438960:CDS	30.0%
!!!	TTTTTAGCTGAGGTTTCAAA+CGG	-	chr3_3:3759036-3759055	Msa0438960:CDS	30.0%
!	TTTTAACACCAGATGGTAAT+TGG	+	chr3_3:3759263-3759282	None:intergenic	30.0%
!	ATCAACTTTTTAACACCAGA+TGG	+	chr3_3:3759270-3759289	None:intergenic	30.0%
	AACCCATATAATCCACAAAA+TGG	+	chr3_3:3759694-3759713	None:intergenic	30.0%
	TTGAGCATCTATAATATTCG+CGG	+	chr3_3:3759912-3759931	None:intergenic	30.0%
	GTTAACTTTCACACAATTTG+TGG	+	chr3_3:3758303-3758322	None:intergenic	30.0%
	TGTGAAAGTTAACAAGGTTT+GGG	-	chr3_3:3758310-3758329	Msa0438960:three_prime_UTR	30.0%
!!	CATTTTGTTTCATAGATCTG+TGG	-	chr3_3:3758333-3758352	Msa0438960:three_prime_UTR	30.0%
!	CTGCTTTAAACTACTTGATT+TGG	-	chr3_3:3758883-3758902	Msa0438960:CDS	30.0%
!	TGAATCATTTAATTTCGGCT+CGG	-	chr3_3:3758972-3758991	Msa0438960:CDS	30.0%
!!!	TTTTTAGCTGAGGTTTCAAA+CGG	-	chr3_3:3759036-3759055	Msa0438960:CDS	30.0%
!	TTTTAACACCAGATGGTAAT+TGG	+	chr3_3:3759263-3759282	None:intergenic	30.0%
!	ATCAACTTTTTAACACCAGA+TGG	+	chr3_3:3759270-3759289	None:intergenic	30.0%
	AACCCATATAATCCACAAAA+TGG	+	chr3_3:3759694-3759713	None:intergenic	30.0%
	TTGAGCATCTATAATATTCG+CGG	+	chr3_3:3759912-3759931	None:intergenic	30.0%
	GGTTTGTATCAGACACAAAT+TGG	-	chr3_3:3758220-3758239	Msa0438960:three_prime_UTR	35.0%
	AACTTTCACACAATTTGTGG+CGG	+	chr3_3:3758300-3758319	None:intergenic	35.0%
	GTGTGAAAGTTAACAAGGTT+TGG	-	chr3_3:3758309-3758328	Msa0438960:three_prime_UTR	35.0%
!!	ATTATGTAGCTTTGGGGTTT+AGG	-	chr3_3:3758791-3758810	Msa0438960:CDS	35.0%
!	TTGGGGTTTAGGTTCAATTA+TGG	-	chr3_3:3758802-3758821	Msa0438960:CDS	35.0%
	AACCAATATTGTCCATGGTT+CGG	+	chr3_3:3758937-3758956	None:intergenic	35.0%
	TTGTGAACCAATATTGTCCA+TGG	+	chr3_3:3758942-3758961	None:intergenic	35.0%
!!!	TCTGTTTGTCTTTTTAGCTG+AGG	-	chr3_3:3759026-3759045	Msa0438960:CDS	35.0%
	TCCGATATAAACTCACAGAT+TGG	-	chr3_3:3759093-3759112	Msa0438960:CDS	35.0%
	CCCAATCTGTGAGTTTATAT+CGG	+	chr3_3:3759097-3759116	None:intergenic	35.0%
	CCGATATAAACTCACAGATT+GGG	-	chr3_3:3759094-3759113	Msa0438960:CDS	35.0%
	CTCTTTCAAGATCTTTGCAT+TGG	+	chr3_3:3759217-3759236	None:intergenic	35.0%
	ACTAAAACGTATGCTGATGT+GGG	+	chr3_3:3759240-3759259	None:intergenic	35.0%
!!	GTTTTAGTCCAATTACCATC+TGG	-	chr3_3:3759252-3759271	Msa0438960:intron	35.0%
	CTTCTATCATGGAATTGCTT+AGG	-	chr3_3:3759663-3759682	Msa0438960:intron	35.0%
	ATCATGGAATTGCTTAGGTT+CGG	-	chr3_3:3759668-3759687	Msa0438960:intron	35.0%
!!	GGCCATTTTGTGGATTATAT+GGG	-	chr3_3:3759689-3759708	Msa0438960:intron	35.0%
	ATGGAGTTGTATAAGCTGAA+TGG	+	chr3_3:3759792-3759811	None:intergenic	35.0%
	AGTTTGTATTTGTACAGACG+AGG	-	chr3_3:3759855-3759874	Msa0438960:intron	35.0%
	GGTTTGTATCAGACACAAAT+TGG	-	chr3_3:3758220-3758239	Msa0438960:three_prime_UTR	35.0%
	AACTTTCACACAATTTGTGG+CGG	+	chr3_3:3758300-3758319	None:intergenic	35.0%
	GTGTGAAAGTTAACAAGGTT+TGG	-	chr3_3:3758309-3758328	Msa0438960:three_prime_UTR	35.0%
!!	ATTATGTAGCTTTGGGGTTT+AGG	-	chr3_3:3758791-3758810	Msa0438960:CDS	35.0%
!	TTGGGGTTTAGGTTCAATTA+TGG	-	chr3_3:3758802-3758821	Msa0438960:CDS	35.0%
	AACCAATATTGTCCATGGTT+CGG	+	chr3_3:3758937-3758956	None:intergenic	35.0%
	TTGTGAACCAATATTGTCCA+TGG	+	chr3_3:3758942-3758961	None:intergenic	35.0%
!!!	TCTGTTTGTCTTTTTAGCTG+AGG	-	chr3_3:3759026-3759045	Msa0438960:CDS	35.0%
	TCCGATATAAACTCACAGAT+TGG	-	chr3_3:3759093-3759112	Msa0438960:CDS	35.0%
	CCCAATCTGTGAGTTTATAT+CGG	+	chr3_3:3759097-3759116	None:intergenic	35.0%
	CCGATATAAACTCACAGATT+GGG	-	chr3_3:3759094-3759113	Msa0438960:CDS	35.0%
	CTCTTTCAAGATCTTTGCAT+TGG	+	chr3_3:3759217-3759236	None:intergenic	35.0%
	ACTAAAACGTATGCTGATGT+GGG	+	chr3_3:3759240-3759259	None:intergenic	35.0%
!!	GTTTTAGTCCAATTACCATC+TGG	-	chr3_3:3759252-3759271	Msa0438960:intron	35.0%
	CTTCTATCATGGAATTGCTT+AGG	-	chr3_3:3759663-3759682	Msa0438960:intron	35.0%
	ATCATGGAATTGCTTAGGTT+CGG	-	chr3_3:3759668-3759687	Msa0438960:intron	35.0%
!!	GGCCATTTTGTGGATTATAT+GGG	-	chr3_3:3759689-3759708	Msa0438960:intron	35.0%
	ATGGAGTTGTATAAGCTGAA+TGG	+	chr3_3:3759792-3759811	None:intergenic	35.0%
	AGTTTGTATTTGTACAGACG+AGG	-	chr3_3:3759855-3759874	Msa0438960:intron	35.0%
	CTGATACAAACCAAAGTCGA+TGG	+	chr3_3:3758212-3758231	None:intergenic	40.0%
!!	TGAGAGTACCAGTAGAGAAA+CGG	+	chr3_3:3758674-3758693	None:intergenic	40.0%
	TCAAAAACCGAACCAGACAT+AGG	-	chr3_3:3758839-3758858	Msa0438960:CDS	40.0%
	AAATGGTCCTATGTCTGGTT+CGG	+	chr3_3:3758849-3758868	None:intergenic	40.0%
	AACCAGACATAGGACCATTT+GGG	-	chr3_3:3758849-3758868	Msa0438960:CDS	40.0%
	CTGTTCAAATAACCGAACCA+TGG	-	chr3_3:3758922-3758941	Msa0438960:CDS	40.0%
	AACCGAACCATGGACAATAT+TGG	-	chr3_3:3758932-3758951	Msa0438960:CDS	40.0%
	GACTAAAACGTATGCTGATG+TGG	+	chr3_3:3759241-3759260	None:intergenic	40.0%
	AGTTGATTGATACTCGATGC+AGG	-	chr3_3:3759283-3759302	Msa0438960:intron	40.0%
	GTTGATTGATACTCGATGCA+GGG	-	chr3_3:3759284-3759303	Msa0438960:intron	40.0%
	ACTGTCTCTAATCCAACTCA+CGG	-	chr3_3:3759318-3759337	Msa0438960:intron	40.0%
	AATCCTGTTGATCATCCTCA+TGG	-	chr3_3:3759414-3759433	Msa0438960:intron	40.0%
!!	CGGCCATTTTGTGGATTATA+TGG	-	chr3_3:3759688-3759707	Msa0438960:intron	40.0%
!	ATGCATTTTCCTTTGCGAAC+CGG	-	chr3_3:3759762-3759781	Msa0438960:intron	40.0%
	GTATAAGCTGAATGGAAGTC+CGG	+	chr3_3:3759784-3759803	None:intergenic	40.0%
	TATTTGTACAGACGAGGACA+GGG	-	chr3_3:3759861-3759880	Msa0438960:intron	40.0%
	AGCATCTATAATATTCGCGG+AGG	+	chr3_3:3759909-3759928	None:intergenic	40.0%
	CTGATACAAACCAAAGTCGA+TGG	+	chr3_3:3758212-3758231	None:intergenic	40.0%
!!	TGAGAGTACCAGTAGAGAAA+CGG	+	chr3_3:3758674-3758693	None:intergenic	40.0%
	TCAAAAACCGAACCAGACAT+AGG	-	chr3_3:3758839-3758858	Msa0438960:CDS	40.0%
	AAATGGTCCTATGTCTGGTT+CGG	+	chr3_3:3758849-3758868	None:intergenic	40.0%
	AACCAGACATAGGACCATTT+GGG	-	chr3_3:3758849-3758868	Msa0438960:CDS	40.0%
	CTGTTCAAATAACCGAACCA+TGG	-	chr3_3:3758922-3758941	Msa0438960:CDS	40.0%
	AACCGAACCATGGACAATAT+TGG	-	chr3_3:3758932-3758951	Msa0438960:CDS	40.0%
	GACTAAAACGTATGCTGATG+TGG	+	chr3_3:3759241-3759260	None:intergenic	40.0%
	AGTTGATTGATACTCGATGC+AGG	-	chr3_3:3759283-3759302	Msa0438960:intron	40.0%
	GTTGATTGATACTCGATGCA+GGG	-	chr3_3:3759284-3759303	Msa0438960:intron	40.0%
	ACTGTCTCTAATCCAACTCA+CGG	-	chr3_3:3759318-3759337	Msa0438960:intron	40.0%
	AATCCTGTTGATCATCCTCA+TGG	-	chr3_3:3759414-3759433	Msa0438960:intron	40.0%
!!	CGGCCATTTTGTGGATTATA+TGG	-	chr3_3:3759688-3759707	Msa0438960:intron	40.0%
!	ATGCATTTTCCTTTGCGAAC+CGG	-	chr3_3:3759762-3759781	Msa0438960:intron	40.0%
	GTATAAGCTGAATGGAAGTC+CGG	+	chr3_3:3759784-3759803	None:intergenic	40.0%
	TATTTGTACAGACGAGGACA+GGG	-	chr3_3:3759861-3759880	Msa0438960:intron	40.0%
	AGCATCTATAATATTCGCGG+AGG	+	chr3_3:3759909-3759928	None:intergenic	40.0%
	CAAAACTGCACTCTACTTGC+CGG	-	chr3_3:3758248-3758267	Msa0438960:three_prime_UTR	45.0%
	GAACCAGACATAGGACCATT+TGG	-	chr3_3:3758848-3758867	Msa0438960:CDS	45.0%
	ACATAGGACCATTTGGGTCA+TGG	-	chr3_3:3758855-3758874	Msa0438960:CDS	45.0%
	CAGTTGAACCATGACCCAAA+TGG	+	chr3_3:3758866-3758885	None:intergenic	45.0%
	GGTTTCAAACGGTATTCCTC+AGG	-	chr3_3:3759047-3759066	Msa0438960:CDS	45.0%
	TTCAAACGGTATTCCTCAGG+AGG	-	chr3_3:3759050-3759069	Msa0438960:CDS	45.0%
	CCAATTCGCATTGAAGAGAG+AGG	+	chr3_3:3759129-3759148	None:intergenic	45.0%
	CCTCTCTCTTCAATGCGAAT+TGG	-	chr3_3:3759126-3759145	Msa0438960:CDS	45.0%
	ACAACATTGAGCTGAACCCA+GGG	-	chr3_3:3759160-3759179	Msa0438960:CDS	45.0%
!!	ATTAGAGACAGTACCGACAG+TGG	+	chr3_3:3759310-3759329	None:intergenic	45.0%
	GTCATAGCAGATGGCTCAAT+CGG	-	chr3_3:3759364-3759383	Msa0438960:intron	45.0%
	GTCTTGAAACCACCCTTAGT+TGG	+	chr3_3:3759507-3759526	None:intergenic	45.0%
	ACTAAGGGTGGTTTCAAGAC+TGG	-	chr3_3:3759507-3759526	Msa0438960:intron	45.0%
	ACCTCTTAAGCGCAGAAAGT+AGG	-	chr3_3:3759530-3759549	Msa0438960:intron	45.0%
	ACCTACTTTCTGCGCTTAAG+AGG	+	chr3_3:3759534-3759553	None:intergenic	45.0%
	AGCGCAGAAAGTAGGTTAGT+AGG	-	chr3_3:3759538-3759557	Msa0438960:intron	45.0%
	GTATTTGTACAGACGAGGAC+AGG	-	chr3_3:3759860-3759879	Msa0438960:intron	45.0%
	CAAAACTGCACTCTACTTGC+CGG	-	chr3_3:3758248-3758267	Msa0438960:three_prime_UTR	45.0%
	GAACCAGACATAGGACCATT+TGG	-	chr3_3:3758848-3758867	Msa0438960:CDS	45.0%
	ACATAGGACCATTTGGGTCA+TGG	-	chr3_3:3758855-3758874	Msa0438960:CDS	45.0%
	CAGTTGAACCATGACCCAAA+TGG	+	chr3_3:3758866-3758885	None:intergenic	45.0%
	GGTTTCAAACGGTATTCCTC+AGG	-	chr3_3:3759047-3759066	Msa0438960:CDS	45.0%
	TTCAAACGGTATTCCTCAGG+AGG	-	chr3_3:3759050-3759069	Msa0438960:CDS	45.0%
	CCAATTCGCATTGAAGAGAG+AGG	+	chr3_3:3759129-3759148	None:intergenic	45.0%
	CCTCTCTCTTCAATGCGAAT+TGG	-	chr3_3:3759126-3759145	Msa0438960:CDS	45.0%
	ACAACATTGAGCTGAACCCA+GGG	-	chr3_3:3759160-3759179	Msa0438960:CDS	45.0%
!!	ATTAGAGACAGTACCGACAG+TGG	+	chr3_3:3759310-3759329	None:intergenic	45.0%
	GTCATAGCAGATGGCTCAAT+CGG	-	chr3_3:3759364-3759383	Msa0438960:intron	45.0%
	GTCTTGAAACCACCCTTAGT+TGG	+	chr3_3:3759507-3759526	None:intergenic	45.0%
	ACTAAGGGTGGTTTCAAGAC+TGG	-	chr3_3:3759507-3759526	Msa0438960:intron	45.0%
	ACCTCTTAAGCGCAGAAAGT+AGG	-	chr3_3:3759530-3759549	Msa0438960:intron	45.0%
	ACCTACTTTCTGCGCTTAAG+AGG	+	chr3_3:3759534-3759553	None:intergenic	45.0%
	AGCGCAGAAAGTAGGTTAGT+AGG	-	chr3_3:3759538-3759557	Msa0438960:intron	45.0%
	GTATTTGTACAGACGAGGAC+AGG	-	chr3_3:3759860-3759879	Msa0438960:intron	45.0%
!	AGAGAAACGGCGAAGAGCAT+TGG	+	chr3_3:3758661-3758680	None:intergenic	50.0%
	GACCCAAATGGTCCTATGTC+TGG	+	chr3_3:3758854-3758873	None:intergenic	50.0%
	CACAACATTGAGCTGAACCC+AGG	-	chr3_3:3759159-3759178	Msa0438960:CDS	50.0%
!	GGCAAGGTGGAAAGCTTGTT+CGG	-	chr3_3:3759181-3759200	Msa0438960:intron	50.0%
!	GCAAGGTGGAAAGCTTGTTC+GGG	-	chr3_3:3759182-3759201	Msa0438960:intron	50.0%
	CGGTGATCGCAAGCTTAAGA+AGG	-	chr3_3:3759338-3759357	Msa0438960:intron	50.0%
	GATCGCAAGCTTAAGAAGGC+TGG	-	chr3_3:3759342-3759361	Msa0438960:intron	50.0%
!	AGAAGGCTGGTCATAGCAGA+TGG	-	chr3_3:3759355-3759374	Msa0438960:intron	50.0%
	TCAATCGGAGACCGGTTGTT+CGG	-	chr3_3:3759379-3759398	Msa0438960:intron	50.0%
	CCACCATGAGGATGATCAAC+AGG	+	chr3_3:3759420-3759439	None:intergenic	50.0%
	CCTGTTGATCATCCTCATGG+TGG	-	chr3_3:3759417-3759436	Msa0438960:intron	50.0%
	GTTGATCATCCTCATGGTGG+AGG	-	chr3_3:3759420-3759439	Msa0438960:intron	50.0%
	GCAAGAGCAAGAGTAGTGGT+GGG	-	chr3_3:3759448-3759467	Msa0438960:intron	50.0%
	TCCTTGGGGTAAGCCAACTA+AGG	-	chr3_3:3759491-3759510	Msa0438960:intron	50.0%
	CCTTGGGGTAAGCCAACTAA+GGG	-	chr3_3:3759492-3759511	Msa0438960:intron	50.0%
!!	GCTTAGGTTCGGCCATTTTG+TGG	-	chr3_3:3759679-3759698	Msa0438960:intron	50.0%
!	AATGGAAGTCCGGTTCGCAA+AGG	+	chr3_3:3759774-3759793	None:intergenic	50.0%
!	AGAGAAACGGCGAAGAGCAT+TGG	+	chr3_3:3758661-3758680	None:intergenic	50.0%
	GACCCAAATGGTCCTATGTC+TGG	+	chr3_3:3758854-3758873	None:intergenic	50.0%
	CACAACATTGAGCTGAACCC+AGG	-	chr3_3:3759159-3759178	Msa0438960:CDS	50.0%
!	GGCAAGGTGGAAAGCTTGTT+CGG	-	chr3_3:3759181-3759200	Msa0438960:intron	50.0%
!	GCAAGGTGGAAAGCTTGTTC+GGG	-	chr3_3:3759182-3759201	Msa0438960:intron	50.0%
	CGGTGATCGCAAGCTTAAGA+AGG	-	chr3_3:3759338-3759357	Msa0438960:intron	50.0%
	GATCGCAAGCTTAAGAAGGC+TGG	-	chr3_3:3759342-3759361	Msa0438960:intron	50.0%
!	AGAAGGCTGGTCATAGCAGA+TGG	-	chr3_3:3759355-3759374	Msa0438960:intron	50.0%
	TCAATCGGAGACCGGTTGTT+CGG	-	chr3_3:3759379-3759398	Msa0438960:intron	50.0%
	CCACCATGAGGATGATCAAC+AGG	+	chr3_3:3759420-3759439	None:intergenic	50.0%
	CCTGTTGATCATCCTCATGG+TGG	-	chr3_3:3759417-3759436	Msa0438960:intron	50.0%
	GTTGATCATCCTCATGGTGG+AGG	-	chr3_3:3759420-3759439	Msa0438960:intron	50.0%
	GCAAGAGCAAGAGTAGTGGT+GGG	-	chr3_3:3759448-3759467	Msa0438960:intron	50.0%
	TCCTTGGGGTAAGCCAACTA+AGG	-	chr3_3:3759491-3759510	Msa0438960:intron	50.0%
	CCTTGGGGTAAGCCAACTAA+GGG	-	chr3_3:3759492-3759511	Msa0438960:intron	50.0%
!!	GCTTAGGTTCGGCCATTTTG+TGG	-	chr3_3:3759679-3759698	Msa0438960:intron	50.0%
!	AATGGAAGTCCGGTTCGCAA+AGG	+	chr3_3:3759774-3759793	None:intergenic	50.0%
	TACTTGCCGGAAAACGCAGC+CGG	-	chr3_3:3758261-3758280	Msa0438960:three_prime_UTR	55.0%
	GCTCTTCGCCGTTTCTCTAC+TGG	-	chr3_3:3758663-3758682	Msa0438960:exon	55.0%
	ATTGAGCTGAACCCAGGGCA+AGG	-	chr3_3:3759165-3759184	Msa0438960:CDS	55.0%
	CAAGCTTTCCACCTTGCCCT+GGG	+	chr3_3:3759179-3759198	None:intergenic	55.0%
	ACAAGCTTTCCACCTTGCCC+TGG	+	chr3_3:3759180-3759199	None:intergenic	55.0%
	AGCTTGCGATCACCGTGAGT+TGG	+	chr3_3:3759333-3759352	None:intergenic	55.0%
	CAGATGGCTCAATCGGAGAC+CGG	-	chr3_3:3759371-3759390	Msa0438960:intron	55.0%
	CAATCGGAGACCGGTTGTTC+GGG	-	chr3_3:3759380-3759399	Msa0438960:intron	55.0%
	AATCGGAGACCGGTTGTTCG+GGG	-	chr3_3:3759381-3759400	Msa0438960:intron	55.0%
	ATAGCCACACCCCGAACAAC+CGG	+	chr3_3:3759393-3759412	None:intergenic	55.0%
!	TCATCCTCATGGTGGAGGAG+AGG	-	chr3_3:3759425-3759444	Msa0438960:intron	55.0%
!	CATCCTCATGGTGGAGGAGA+GGG	-	chr3_3:3759426-3759445	Msa0438960:intron	55.0%
	GAGGGCAAGAGCAAGAGTAG+TGG	-	chr3_3:3759444-3759463	Msa0438960:intron	55.0%
	GGCAAGAGCAAGAGTAGTGG+TGG	-	chr3_3:3759447-3759466	Msa0438960:intron	55.0%
!	AGAGCAAGAGTAGTGGTGGG+TGG	-	chr3_3:3759451-3759470	Msa0438960:intron	55.0%
!!	GAGCAAGAGTAGTGGTGGGT+GGG	-	chr3_3:3759452-3759471	Msa0438960:intron	55.0%
!!	AGCAAGAGTAGTGGTGGGTG+GGG	-	chr3_3:3759453-3759472	Msa0438960:intron	55.0%
	GAAAGGTTCCCGCACTCCTT+GGG	-	chr3_3:3759476-3759495	Msa0438960:intron	55.0%
	AAAGGTTCCCGCACTCCTTG+GGG	-	chr3_3:3759477-3759496	Msa0438960:intron	55.0%
	TTGGCTTACCCCAAGGAGTG+CGG	+	chr3_3:3759488-3759507	None:intergenic	55.0%
!	CCCTTAGTTGGCTTACCCCA+AGG	+	chr3_3:3759495-3759514	None:intergenic	55.0%
	TGGGGTAAGCCAACTAAGGG+TGG	-	chr3_3:3759495-3759514	Msa0438960:intron	55.0%
	TACTTGCCGGAAAACGCAGC+CGG	-	chr3_3:3758261-3758280	Msa0438960:three_prime_UTR	55.0%
	GCTCTTCGCCGTTTCTCTAC+TGG	-	chr3_3:3758663-3758682	Msa0438960:exon	55.0%
	ATTGAGCTGAACCCAGGGCA+AGG	-	chr3_3:3759165-3759184	Msa0438960:CDS	55.0%
	CAAGCTTTCCACCTTGCCCT+GGG	+	chr3_3:3759179-3759198	None:intergenic	55.0%
	ACAAGCTTTCCACCTTGCCC+TGG	+	chr3_3:3759180-3759199	None:intergenic	55.0%
	AGCTTGCGATCACCGTGAGT+TGG	+	chr3_3:3759333-3759352	None:intergenic	55.0%
	CAGATGGCTCAATCGGAGAC+CGG	-	chr3_3:3759371-3759390	Msa0438960:intron	55.0%
	CAATCGGAGACCGGTTGTTC+GGG	-	chr3_3:3759380-3759399	Msa0438960:intron	55.0%
	AATCGGAGACCGGTTGTTCG+GGG	-	chr3_3:3759381-3759400	Msa0438960:intron	55.0%
	ATAGCCACACCCCGAACAAC+CGG	+	chr3_3:3759393-3759412	None:intergenic	55.0%
!	TCATCCTCATGGTGGAGGAG+AGG	-	chr3_3:3759425-3759444	Msa0438960:intron	55.0%
!	CATCCTCATGGTGGAGGAGA+GGG	-	chr3_3:3759426-3759445	Msa0438960:intron	55.0%
	GAGGGCAAGAGCAAGAGTAG+TGG	-	chr3_3:3759444-3759463	Msa0438960:intron	55.0%
	GGCAAGAGCAAGAGTAGTGG+TGG	-	chr3_3:3759447-3759466	Msa0438960:intron	55.0%
!	AGAGCAAGAGTAGTGGTGGG+TGG	-	chr3_3:3759451-3759470	Msa0438960:intron	55.0%
!!	GAGCAAGAGTAGTGGTGGGT+GGG	-	chr3_3:3759452-3759471	Msa0438960:intron	55.0%
!!	AGCAAGAGTAGTGGTGGGTG+GGG	-	chr3_3:3759453-3759472	Msa0438960:intron	55.0%
	GAAAGGTTCCCGCACTCCTT+GGG	-	chr3_3:3759476-3759495	Msa0438960:intron	55.0%
	AAAGGTTCCCGCACTCCTTG+GGG	-	chr3_3:3759477-3759496	Msa0438960:intron	55.0%
	TTGGCTTACCCCAAGGAGTG+CGG	+	chr3_3:3759488-3759507	None:intergenic	55.0%
!	CCCTTAGTTGGCTTACCCCA+AGG	+	chr3_3:3759495-3759514	None:intergenic	55.0%
	TGGGGTAAGCCAACTAAGGG+TGG	-	chr3_3:3759495-3759514	Msa0438960:intron	55.0%
!	GCAACTCCGGCTGCGTTTTC+CGG	+	chr3_3:3758270-3758289	None:intergenic	60.0%
!	GGAAAGCTTGTTCGGGCAGC+TGG	-	chr3_3:3759189-3759208	Msa0438960:intron	60.0%
	ACTCGATGCAGGGCCACTGT+CGG	-	chr3_3:3759294-3759313	Msa0438960:intron	60.0%
	TTGCCCTCTCCTCCACCATG+AGG	+	chr3_3:3759432-3759451	None:intergenic	60.0%
!!	GCAAGAGTAGTGGTGGGTGG+GGG	-	chr3_3:3759454-3759473	Msa0438960:intron	60.0%
!!	AGTAGTGGTGGGTGGGGGAA+AGG	-	chr3_3:3759459-3759478	Msa0438960:intron	60.0%
	GGAAAGGTTCCCGCACTCCT+TGG	-	chr3_3:3759475-3759494	Msa0438960:intron	60.0%
!	TGGCTTACCCCAAGGAGTGC+GGG	+	chr3_3:3759487-3759506	None:intergenic	60.0%
!	GCAACTCCGGCTGCGTTTTC+CGG	+	chr3_3:3758270-3758289	None:intergenic	60.0%
!	GGAAAGCTTGTTCGGGCAGC+TGG	-	chr3_3:3759189-3759208	Msa0438960:intron	60.0%
	ACTCGATGCAGGGCCACTGT+CGG	-	chr3_3:3759294-3759313	Msa0438960:intron	60.0%
	TTGCCCTCTCCTCCACCATG+AGG	+	chr3_3:3759432-3759451	None:intergenic	60.0%
!!	GCAAGAGTAGTGGTGGGTGG+GGG	-	chr3_3:3759454-3759473	Msa0438960:intron	60.0%
!!	AGTAGTGGTGGGTGGGGGAA+AGG	-	chr3_3:3759459-3759478	Msa0438960:intron	60.0%
	GGAAAGGTTCCCGCACTCCT+TGG	-	chr3_3:3759475-3759494	Msa0438960:intron	60.0%
!	TGGCTTACCCCAAGGAGTGC+GGG	+	chr3_3:3759487-3759506	None:intergenic	60.0%
	ACGCAGCCGGAGTTGCGAGT+TGG	-	chr3_3:3758274-3758293	Msa0438960:three_prime_UTR	65.0%
	TGGCGGCCAACTCGCAACTC+CGG	+	chr3_3:3758283-3758302	None:intergenic	65.0%
!	TTCCTCAGGAGGCACGCGAG+AGG	-	chr3_3:3759061-3759080	Msa0438960:CDS	65.0%
	ATCCTCTCGCGTGCCTCCTG+AGG	+	chr3_3:3759066-3759085	None:intergenic	65.0%
	GAGCTGAACCCAGGGCAAGG+TGG	-	chr3_3:3759168-3759187	Msa0438960:intron	65.0%
	GAGACCGGTTGTTCGGGGTG+TGG	-	chr3_3:3759386-3759405	Msa0438960:intron	65.0%
	ACGCAGCCGGAGTTGCGAGT+TGG	-	chr3_3:3758274-3758293	Msa0438960:three_prime_UTR	65.0%
	TGGCGGCCAACTCGCAACTC+CGG	+	chr3_3:3758283-3758302	None:intergenic	65.0%
!	TTCCTCAGGAGGCACGCGAG+AGG	-	chr3_3:3759061-3759080	Msa0438960:CDS	65.0%
	ATCCTCTCGCGTGCCTCCTG+AGG	+	chr3_3:3759066-3759085	None:intergenic	65.0%
	GAGCTGAACCCAGGGCAAGG+TGG	-	chr3_3:3759168-3759187	Msa0438960:intron	65.0%
	GAGACCGGTTGTTCGGGGTG+TGG	-	chr3_3:3759386-3759405	Msa0438960:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_3	gene	3758207	3760022	3758207	ID=Msa0438960;Name=Msa0438960
chr3_3	mRNA	3758207	3760022	3758207	ID=Msa0438960-mRNA-1;Parent=Msa0438960;Name=Msa0438960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=131\|1\|1\|1\|0.5\|0.33\|3\|471\|196
chr3_3	exon	3758207	3759186	3758207	ID=Msa0438960-mRNA-1:exon:938;Parent=Msa0438960-mRNA-1
chr3_3	exon	3759545	3759638	3759545	ID=Msa0438960-mRNA-1:exon:937;Parent=Msa0438960-mRNA-1
chr3_3	exon	3759904	3760022	3759904	ID=Msa0438960-mRNA-1:exon:936;Parent=Msa0438960-mRNA-1
chr3_3	five_prime_UTR	3759904	3760022	3759904	ID=Msa0438960-mRNA-1:five_prime_utr;Parent=Msa0438960-mRNA-1
chr3_3	five_prime_UTR	3759627	3759638	3759627	ID=Msa0438960-mRNA-1:five_prime_utr;Parent=Msa0438960-mRNA-1
chr3_3	CDS	3759545	3759626	3759545	ID=Msa0438960-mRNA-1:cds;Parent=Msa0438960-mRNA-1
chr3_3	CDS	3758678	3759186	3758678	ID=Msa0438960-mRNA-1:cds;Parent=Msa0438960-mRNA-1
chr3_3	three_prime_UTR	3758207	3758677	3758207	ID=Msa0438960-mRNA-1:three_prime_utr;Parent=Msa0438960-mRNA-1

Gene Sequence

>Msa0438960

ATGGCTTTGCAACTATTGAGAAATCGCGCTTCATCGTCAACATTCAATTTGTTCACCAATGCTCTTCGCCGTTTCTCTACTGCTGAGGTTTCAAACGGTATTCCTCAGGAGGCACGCGAGAGGATGTTGTATTCCGATATAAACTCACAGATTGGGAGTTGTATGCCTCTCTCTTCAATGCGAATTGGAACAATCATTCACAACATTGAGCTGAACCCAGGGCAAGGTGGAAAGCTTGTTCGGGCAGCTGGTACCAATGCAAAGATCTTGAAAGAGCCCACATCAGCATACGTTTTAGTCCAATTACCATCTGGTGTTAAAAAGTTGATTGATACTCGATGCAGGGCCACTGTCGGTACTGTCTCTAATCCAACTCACGGTGATCGCAAGCTTAAGAAGGCTGGTCATAGCAGATGGCTCAATCGGAGACCGGTTGTTCGGGGTGTGGCTATGAATCCTGTTGATCATCCTCATGGTGGAGGAGAGGGCAAGAGCAAGAGTAGTGGTGGGTGGGGGAAAGGTTCCCGCACTCCTTGGGGTAAGCCAACTAAGGGTGGTTTCAAGACTGGACCTCTTAAGCGCAGAAAGTAG

Protein sequence

>Msa0438960

MALQLLRNRASSSTFNLFTNALRRFSTAEVSNGIPQEARERMLYSDINSQIGSCMPLSSMRIGTIIHNIELNPGQGGKLVRAAGTNAKILKEPTSAYVLVQLPSGVKKLIDTRCRATVGTVSNPTHGDRKLKKAGHSRWLNRRPVVRGVAMNPVDHPHGGGEGKSKSSGGWGKGSRTPWGKPTKGGFKTGPLKRRK*