Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0445020 | XP_013459209.1 | 97.590 | 332 | 8 | 0 | 1 | 332 | 150 | 481 | 0.0 | 660 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0445020 | sp|Q8VYT5|FB254_ARATH | 62.102 | 314 | 116 | 2 | 18 | 330 | 165 | 476 | 1.08e-132 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0445020 | A0A072UUZ8 | 97.590 | 332 | 8 | 0 | 1 | 332 | 150 | 481 | 0.0 | 660 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0064350 | Msa0445020 | 0.808667 | 2.767097e-50 | -8.615850e-47 |
| Msa0087000 | Msa0445020 | 0.816538 | 5.251636e-52 | -8.615850e-47 |
| Msa0094920 | Msa0445020 | 0.805656 | 1.201262e-49 | -8.615850e-47 |
| Msa0194480 | Msa0445020 | 0.813158 | 2.948168e-51 | -8.615850e-47 |
| Msa0236980 | Msa0445020 | 0.817534 | 3.137471e-52 | -8.615850e-47 |
| Msa0423520 | Msa0445020 | 0.802959 | 4.379666e-49 | -8.615850e-47 |
| Msa0445020 | Msa0449820 | 0.816215 | 6.202230e-52 | -8.615850e-47 |
| Msa0445020 | Msa0449830 | 0.804768 | 1.843220e-49 | -8.615850e-47 |
| Msa0445020 | Msa0485120 | 0.803178 | 3.946098e-49 | -8.615850e-47 |
| Msa0445020 | Msa0585900 | 0.810279 | 1.247326e-50 | -8.615850e-47 |
| Msa0445020 | Msa0594910 | 0.804529 | 2.067433e-49 | -8.615850e-47 |
| Msa0445020 | Msa0617260 | 0.800466 | 1.422702e-48 | -8.615850e-47 |
| Msa0445020 | Msa0663900 | 0.811003 | 8.699485e-51 | -8.615850e-47 |
| Msa0445020 | Msa0673470 | 0.808703 | 2.718994e-50 | -8.615850e-47 |
| Msa0445020 | Msa0687630 | 0.803053 | 4.188836e-49 | -8.615850e-47 |
| Msa0445020 | Msa0692110 | 0.816597 | 5.094979e-52 | -8.615850e-47 |
| Msa0445020 | Msa0711490 | 0.804074 | 2.572398e-49 | -8.615850e-47 |
| Msa0445020 | Msa0792090 | 0.820675 | 6.052258e-53 | -8.615850e-47 |
| Msa0445020 | Msa0797750 | 0.804736 | 1.871945e-49 | -8.615850e-47 |
| Msa0445020 | Msa0814250 | 0.800472 | 1.418727e-48 | -8.615850e-47 |
| Msa0445020 | Msa0874570 | 0.821379 | 4.166516e-53 | -8.615850e-47 |
| Msa0445020 | Msa0908170 | 0.800955 | 1.130484e-48 | -8.615850e-47 |
| Msa0445020 | Msa0930140 | 0.802630 | 5.120871e-49 | -8.615850e-47 |
| Msa0445020 | Msa0939790 | 0.805045 | 1.613139e-49 | -8.615850e-47 |
| Msa0445020 | Msa1013040 | 0.806544 | 7.812354e-50 | -8.615850e-47 |
| Msa0445020 | Msa1050200 | 0.811431 | 7.027047e-51 | -8.615850e-47 |
| Msa0445020 | Msa1089840 | 0.804836 | 1.784434e-49 | -8.615850e-47 |
| Msa0445020 | Msa1144970 | 0.818333 | 2.070848e-52 | -8.615850e-47 |
| Msa0445020 | Msa1267260 | 0.803156 | 3.987583e-49 | -8.615850e-47 |
| Msa0445020 | Msa1267840 | 0.830174 | 3.406394e-55 | -8.615850e-47 |
| Msa0445020 | Msa1269300 | 0.803750 | 3.004039e-49 | -8.615850e-47 |
| Msa0445020 | Msa1286510 | 0.800790 | 1.221806e-48 | -8.615850e-47 |
| Msa0445020 | Msa1369530 | 0.804452 | 2.145614e-49 | -8.615850e-47 |
| Msa0445020 | Msa1372580 | 0.819546 | 1.097103e-52 | -8.615850e-47 |
| Msa0445020 | Msa1393740 | 0.804891 | 1.737933e-49 | -8.615850e-47 |
| Msa0445020 | Msa1435750 | 0.802006 | 6.884241e-49 | -8.615850e-47 |
| Msa0445020 | Msa1452470 | 0.804107 | 2.531834e-49 | -8.615850e-47 |
| Msa0260210 | Msa0445020 | 0.800258 | 1.568444e-48 | -8.615850e-47 |
| Msa0271810 | Msa0445020 | 0.820870 | 5.457857e-53 | -8.615850e-47 |
| Msa0282250 | Msa0445020 | 0.806697 | 7.254713e-50 | -8.615850e-47 |
| Msa0304290 | Msa0445020 | 0.803988 | 2.679912e-49 | -8.615850e-47 |
| Msa0304330 | Msa0445020 | 0.805585 | 1.243478e-49 | -8.615850e-47 |
| Msa0311700 | Msa0445020 | 0.818149 | 2.279004e-52 | -8.615850e-47 |
| Msa0328210 | Msa0445020 | 0.809525 | 1.812432e-50 | -8.615850e-47 |
| Msa0351810 | Msa0445020 | 0.813039 | 3.130937e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0445020 | MtrunA17_Chr3g0079141 | 97.590 | 332 | 8 | 0 | 1 | 332 | 150 | 481 | 0.0 | 660 |
| Msa0445020 | MtrunA17_Chr4g0018891 | 74.441 | 313 | 80 | 0 | 18 | 330 | 182 | 494 | 2.65e-172 | 488 |
| Msa0445020 | MtrunA17_Chr4g0004901 | 28.405 | 257 | 173 | 6 | 49 | 301 | 368 | 617 | 2.04e-17 | 83.2 |
| Msa0445020 | MtrunA17_Chr2g0286991 | 29.478 | 268 | 169 | 12 | 27 | 283 | 258 | 516 | 8.15e-17 | 81.3 |
| Msa0445020 | MtrunA17_Chr2g0286991 | 30.337 | 267 | 168 | 10 | 27 | 283 | 129 | 387 | 6.38e-15 | 75.5 |
| Msa0445020 | MtrunA17_Chr2g0286991 | 30.078 | 256 | 160 | 8 | 27 | 271 | 335 | 582 | 1.96e-12 | 68.2 |
| Msa0445020 | MtrunA17_Chr2g0286991 | 24.919 | 309 | 178 | 8 | 29 | 283 | 157 | 465 | 6.97e-12 | 66.2 |
| Msa0445020 | MtrunA17_Chr1g0212071 | 29.703 | 202 | 114 | 6 | 88 | 286 | 81 | 257 | 1.06e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0445020 | AT5G07670.1 | 62.102 | 314 | 116 | 2 | 18 | 330 | 165 | 476 | 1.09e-133 | 389 |
| Msa0445020 | AT5G51380.1 | 59.202 | 326 | 129 | 1 | 3 | 328 | 156 | 477 | 3.27e-129 | 378 |
| Msa0445020 | AT5G51370.2 | 58.842 | 311 | 128 | 0 | 18 | 328 | 131 | 441 | 8.41e-125 | 365 |
| Msa0445020 | AT5G51370.1 | 57.778 | 225 | 95 | 0 | 18 | 242 | 131 | 355 | 2.65e-84 | 259 |
| Msa0445020 | AT4G15475.1 | 26.667 | 270 | 182 | 10 | 27 | 287 | 258 | 520 | 7.81e-15 | 75.9 |
| Msa0445020 | AT4G15475.1 | 26.978 | 278 | 185 | 9 | 17 | 284 | 119 | 388 | 2.14e-14 | 74.3 |
Find 107 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGTTTCCATTTGAATA+AGG | 0.210551 | 3_3:+18747891 | Msa0445020:three_prime_UTR |
| GTGTAAGAGGTTAGTGAAAT+TGG | 0.269764 | 3_3:+18745603 | Msa0445020:CDS |
| TGCTAAGGAGGTTGTTCTTC+AGG | 0.270342 | 3_3:+18745918 | Msa0445020:CDS |
| AAATCAACATGTGTAAGATT+TGG | 0.275991 | 3_3:-18745175 | None:intergenic |
| TCCTGGATTGGAGGAACATT+TGG | 0.280302 | 3_3:+18745804 | Msa0445020:CDS |
| CAAAAGGGTGTCCGAATTTA+CGG | 0.281538 | 3_3:+18745365 | Msa0445020:CDS |
| AATCATGTAGTTAGTTTAGA+TGG | 0.293759 | 3_3:+18747555 | Msa0445020:three_prime_UTR |
| GAATCTGTGGTTTCGGATAT+TGG | 0.301458 | 3_3:+18745559 | Msa0445020:CDS |
| CTCTTTGAGCGTGGTAAATA+AGG | 0.302598 | 3_3:-18747346 | None:intergenic |
| TCGGTTTGGCTGTTGTTTGC+AGG | 0.308503 | 3_3:+18745968 | Msa0445020:CDS |
| CCTGGATTGGAGGAACATTT+GGG | 0.325022 | 3_3:+18745805 | Msa0445020:CDS |
| GGTTGTTCTTCAGGATTGTT+GGG | 0.332050 | 3_3:+18745927 | Msa0445020:CDS |
| AAGAGGGGTTGGTTAGTATT+GGG | 0.332818 | 3_3:+18745413 | Msa0445020:CDS |
| TGATGTTTCCATTTGAATAA+GGG | 0.336118 | 3_3:+18747892 | Msa0445020:three_prime_UTR |
| GATTGTTGGGGTTTGGATGA+TGG | 0.340625 | 3_3:+18745940 | Msa0445020:CDS |
| ACCTTCAACTTCCGTAAATT+CGG | 0.348446 | 3_3:-18745376 | None:intergenic |
| TCTTCAGGATTGTTGGGGTT+TGG | 0.356666 | 3_3:+18745933 | Msa0445020:CDS |
| TTTACTTCCCCAAGACTTGA+TGG | 0.362895 | 3_3:-18747402 | None:intergenic |
| AATCAACATGTGTAAGATTT+GGG | 0.364502 | 3_3:-18745174 | None:intergenic |
| TTACGGAAGTTGAAGGTAAC+TGG | 0.369542 | 3_3:+18745382 | Msa0445020:CDS |
| AGGTTGTTCTTCAGGATTGT+TGG | 0.369690 | 3_3:+18745926 | Msa0445020:CDS |
| TTGTTTGATGTTGGAAGAAT+TGG | 0.379035 | 3_3:+18745678 | Msa0445020:CDS |
| ATCTTCTACCATCAAGTCTT+GGG | 0.380546 | 3_3:+18747394 | Msa0445020:CDS |
| TTACAAGTGGTGAAGTTGAT+TGG | 0.384843 | 3_3:+18745517 | Msa0445020:CDS |
| AATCTGTGGTTTCGGATATT+GGG | 0.393863 | 3_3:+18745560 | Msa0445020:CDS |
| TACTGAAAGTTGACGACGAC+TGG | 0.393863 | 3_3:+18747587 | Msa0445020:three_prime_UTR |
| AAGTTGATTGGGAGTGTTGA+TGG | 0.402564 | 3_3:+18745529 | Msa0445020:CDS |
| GTAAATAAGGTCGCGAGTGC+AGG | 0.404428 | 3_3:-18747333 | None:intergenic |
| TATTTAGTCCCTTATTCAAA+TGG | 0.405793 | 3_3:-18747900 | None:intergenic |
| CCCTTATCAATTGCTTCAAC+CGG | 0.408922 | 3_3:-18745328 | None:intergenic |
| GTTGATACAGAGTGGTGTTT+CGG | 0.411076 | 3_3:+18745271 | Msa0445020:CDS |
| GTGTCTTGTAAGGTGATTGA+TGG | 0.412926 | 3_3:+18745778 | Msa0445020:CDS |
| TACAAGTGGTGAAGTTGATT+GGG | 0.413076 | 3_3:+18745518 | Msa0445020:CDS |
| CCACGCTCAAAGAGTTGAAA+TGG | 0.413963 | 3_3:+18747355 | Msa0445020:CDS |
| ACCGGTTGAAGCAATTGATA+AGG | 0.414611 | 3_3:+18745327 | Msa0445020:CDS |
| GTGTGTTACATTGATGGAAT+TGG | 0.414955 | 3_3:+18745441 | Msa0445020:CDS |
| GCGAGAATTTGAAGACTTTG+AGG | 0.422153 | 3_3:+18745752 | Msa0445020:CDS |
| TCGATGGGATTAAAGCGATT+GGG | 0.422490 | 3_3:+18745650 | Msa0445020:CDS |
| GTAAAACTGTTTGACATAGA+AGG | 0.427093 | 3_3:+18747201 | Msa0445020:CDS |
| CGACAGTATATAGCAAGTTC+AGG | 0.432434 | 3_3:-18747466 | None:intergenic |
| CCGGTTGAAGCAATTGATAA+GGG | 0.433487 | 3_3:+18745328 | Msa0445020:CDS |
| CATCTTCTACCATCAAGTCT+TGG | 0.441016 | 3_3:+18747393 | Msa0445020:CDS |
| GGAAGAGTGTGTTACATTGA+TGG | 0.441311 | 3_3:+18745435 | Msa0445020:CDS |
| GTAACTGGTGGGAGTGAAGA+GGG | 0.446864 | 3_3:+18745397 | Msa0445020:CDS |
| CTAACTACATGATTACATAA+TGG | 0.453631 | 3_3:-18747546 | None:intergenic |
| TTTGAGGTTTGTGTCTTGTA+AGG | 0.453944 | 3_3:+18745768 | Msa0445020:CDS |
| GAAGAGGGGTTGGTTAGTAT+TGG | 0.456537 | 3_3:+18745412 | Msa0445020:CDS |
| TTCGATGGGATTAAAGCGAT+TGG | 0.456566 | 3_3:+18745649 | Msa0445020:CDS |
| GGTAACTGGTGGGAGTGAAG+AGG | 0.457568 | 3_3:+18745396 | Msa0445020:CDS |
| ATGGATGATGGATGGTTAGC+TGG | 0.465814 | 3_3:+18745718 | Msa0445020:CDS |
| TTCGGTTTGTAGAGCTGCTA+AGG | 0.465847 | 3_3:+18745903 | Msa0445020:CDS |
| AAGGTGATTGATGGTAATCC+TGG | 0.473788 | 3_3:+18745787 | Msa0445020:CDS |
| AATCACTGACTCTAAACCTT+CGG | 0.480906 | 3_3:-18747241 | None:intergenic |
| TTGGAGCTTGTTGGTTGTGA+AGG | 0.486017 | 3_3:+18745622 | Msa0445020:CDS |
| CCCAAATGTTCCTCCAATCC+AGG | 0.488453 | 3_3:-18745805 | None:intergenic |
| GGTTGTGAAGGGAGTTTCGA+TGG | 0.492372 | 3_3:+18745634 | Msa0445020:CDS |
| AAACGTATGATCTTCATCAA+TGG | 0.494146 | 3_3:-18747654 | None:intergenic |
| AGTTGATTGGGAGTGTTGAT+GGG | 0.497681 | 3_3:+18745530 | Msa0445020:CDS |
| TGGTGGGAGTGAAGAGGGGT+TGG | 0.505084 | 3_3:+18745402 | Msa0445020:CDS |
| TCCGAATTTACGGAAGTTGA+AGG | 0.507512 | 3_3:+18745375 | Msa0445020:CDS |
| GTTGTGAAGGGAGTTTCGAT+GGG | 0.515606 | 3_3:+18745635 | Msa0445020:CDS |
| GGGTTGAAAGAAGTTGCAAA+AGG | 0.515791 | 3_3:+18745349 | Msa0445020:CDS |
| GTTGATCATAGGATGGATGA+TGG | 0.516780 | 3_3:+18745706 | Msa0445020:CDS |
| AATAGTATCAGATTACATCT+AGG | 0.517936 | 3_3:-18747771 | None:intergenic |
| TAGAGTCAGTGATTGAATCA+TGG | 0.519512 | 3_3:+18747250 | Msa0445020:CDS |
| GGATGAACAACGAAAGTTGA+AGG | 0.519861 | 3_3:-18745202 | None:intergenic |
| TTCGTTGTTCATCCTCAAAA+CGG | 0.520700 | 3_3:+18745211 | Msa0445020:five_prime_UTR |
| TGCTCGTTGCTTACAACCGA+AGG | 0.529914 | 3_3:+18747225 | Msa0445020:CDS |
| TGAATAAGGGACTAAATAAG+AGG | 0.530833 | 3_3:+18747905 | Msa0445020:three_prime_UTR |
| TAATGGTACAACAAGTTTCA+CGG | 0.534781 | 3_3:-18747529 | None:intergenic |
| GACTCACTGCAGTCAGAGAT+CGG | 0.541070 | 3_3:-18747721 | None:intergenic |
| TCACTCAGCATGGAGTGAGC+TGG | 0.545805 | 3_3:-18747840 | None:intergenic |
| CGATGGGATTAAAGCGATTG+GGG | 0.546488 | 3_3:+18745651 | Msa0445020:CDS |
| TTAGTGAAATTGGAGCTTGT+TGG | 0.552579 | 3_3:+18745613 | Msa0445020:CDS |
| TGGAGCTTGTTGGTTGTGAA+GGG | 0.553189 | 3_3:+18745623 | Msa0445020:CDS |
| AAGTCTTGGGGAAGTAAACA+TGG | 0.554246 | 3_3:+18747407 | Msa0445020:CDS |
| GGTTGAAAGAAGTTGCAAAA+GGG | 0.557299 | 3_3:+18745350 | Msa0445020:CDS |
| AGAGGGGTTGGTTAGTATTG+GGG | 0.557469 | 3_3:+18745414 | Msa0445020:CDS |
| TGGGGCGTGTTGTTTGATGT+TGG | 0.560180 | 3_3:+18745669 | Msa0445020:CDS |
| GCACCGTGTAGTTTCAATGC+GGG | 0.562431 | 3_3:+18745249 | Msa0445020:exon |
| TAACTGGTGGGAGTGAAGAG+GGG | 0.569561 | 3_3:+18745398 | Msa0445020:CDS |
| CGGTTGAAGCAATTGATAAG+GGG | 0.571061 | 3_3:+18745329 | Msa0445020:CDS |
| GATTGATGGTAATCCTGGAT+TGG | 0.572712 | 3_3:+18745792 | Msa0445020:CDS |
| GTTGTTCTTCAGGATTGTTG+GGG | 0.586314 | 3_3:+18745928 | Msa0445020:CDS |
| ATCAGATTACATCTAGGTGA+AGG | 0.587052 | 3_3:-18747765 | None:intergenic |
| ATAATTACATCTCTAAGTGA+AGG | 0.591438 | 3_3:-18747805 | None:intergenic |
| CTGAACTTGCTATATACTGT+CGG | 0.594524 | 3_3:+18747467 | Msa0445020:exon |
| GGGAGTAAAGTCACTCAGCA+TGG | 0.598152 | 3_3:-18747850 | None:intergenic |
| GTCAGTGATTGAATCATGGA+AGG | 0.600567 | 3_3:+18747254 | Msa0445020:CDS |
| CTGGATTGGAGGAACATTTG+GGG | 0.607991 | 3_3:+18745806 | Msa0445020:CDS |
| CCATTTCAACTCTTTGAGCG+TGG | 0.617349 | 3_3:-18747355 | None:intergenic |
| ATTAAGGGATAAGAATGCAA+TGG | 0.617677 | 3_3:+18745870 | Msa0445020:CDS |
| CGCTCAAAGAGTTGAAATGG+AGG | 0.618945 | 3_3:+18747358 | Msa0445020:CDS |
| CGGAAGTTGAAGGTAACTGG+TGG | 0.623597 | 3_3:+18745385 | Msa0445020:CDS |
| ATCATAGGATGGATGATGGA+TGG | 0.627721 | 3_3:+18745710 | Msa0445020:CDS |
| GGTTTGTAGAGCTGCTAAGG+AGG | 0.628873 | 3_3:+18745906 | Msa0445020:CDS |
| AGTCTTGGGGAAGTAAACAT+GGG | 0.645641 | 3_3:+18747408 | Msa0445020:CDS |
| TCTTCTACCATCAAGTCTTG+GGG | 0.646441 | 3_3:+18747395 | Msa0445020:CDS |
| GGAAGTTGAAGGTAACTGGT+GGG | 0.659271 | 3_3:+18745386 | Msa0445020:CDS |
| TGATGGTAATCCTGGATTGG+AGG | 0.660453 | 3_3:+18745795 | Msa0445020:CDS |
| CGATGTTATACGTGGTGTAG+CGG | 0.660775 | 3_3:+18745483 | Msa0445020:CDS |
| CAACCCGCATTGAAACTACA+CGG | 0.669967 | 3_3:-18745252 | None:intergenic |
| GGCGTGTAAGAATTTACAAG+TGG | 0.687214 | 3_3:+18745504 | Msa0445020:CDS |
| GTCTTGGGGAAGTAAACATG+GGG | 0.687581 | 3_3:+18747409 | Msa0445020:CDS |
| CGCACCGTGTAGTTTCAATG+CGG | 0.703551 | 3_3:+18745248 | Msa0445020:exon |
| CAATGCGGGTTGATACAGAG+TGG | 0.708252 | 3_3:+18745263 | Msa0445020:exon |
| TGTAACGACGATGTTATACG+TGG | 0.785514 | 3_3:+18745475 | Msa0445020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAAATAAGTTTAGTA+TGG | - | chr3_3:18746639-18746658 | None:intergenic | 10.0% |
| !!! | AAGTTAATGAAATTTTGAAT+TGG | + | chr3_3:18745999-18746018 | Msa0445020:intron | 15.0% |
| !!! | TTTGTATTTGAAATGTAAAT+CGG | + | chr3_3:18746322-18746341 | Msa0445020:intron | 15.0% |
| !!! | TGTGTTTTATTGTATAATAT+TGG | + | chr3_3:18746840-18746859 | Msa0445020:intron | 15.0% |
| !! | TTACATTTCAAATACAAACT+TGG | - | chr3_3:18746320-18746339 | None:intergenic | 20.0% |
| !!! | ATTTATTGATTATGCTCAAA+TGG | + | chr3_3:18746670-18746689 | Msa0445020:intron | 20.0% |
| !!! | TTTATTGATTATGCTCAAAT+GGG | + | chr3_3:18746671-18746690 | Msa0445020:intron | 20.0% |
| !! | AAAATGTTAAAATCATGTTG+TGG | + | chr3_3:18747006-18747025 | Msa0445020:intron | 20.0% |
| !! | TGTCTCTTGTAAAAATATAA+AGG | + | chr3_3:18747296-18747315 | Msa0445020:CDS | 20.0% |
| !!! | GATACAACATATAATTTTGT+CGG | - | chr3_3:18747746-18747765 | None:intergenic | 20.0% |
| ! | AATCAACATGTGTAAGATTT+GGG | - | chr3_3:18745177-18745196 | None:intergenic | 25.0% |
| ! | AAATCAACATGTGTAAGATT+TGG | - | chr3_3:18745178-18745197 | None:intergenic | 25.0% |
| !!! | AATTGGTTTTTGTTGATCAT+AGG | + | chr3_3:18745695-18745714 | Msa0445020:CDS | 25.0% |
| !! | ATTTTCAGAGATGTCAATTA+AGG | + | chr3_3:18745854-18745873 | Msa0445020:CDS | 25.0% |
| !! | TTTTCAGAGATGTCAATTAA+GGG | + | chr3_3:18745855-18745874 | Msa0445020:CDS | 25.0% |
| ! | AATACAAACTTGGATTATGT+TGG | - | chr3_3:18746310-18746329 | None:intergenic | 25.0% |
| ! | ATGTAAATCGGAATATGAAT+TGG | + | chr3_3:18746334-18746353 | Msa0445020:intron | 25.0% |
| ! | AAATATCAATAGAGTTCCTT+AGG | - | chr3_3:18746446-18746465 | None:intergenic | 25.0% |
| !!! | TTTGTTTCTAATTGCATGTT+CGG | - | chr3_3:18746508-18746527 | None:intergenic | 25.0% |
| ! | ATGACTTATGAGTTACTTAA+TGG | + | chr3_3:18747148-18747167 | Msa0445020:intron | 25.0% |
| ! | CTAACTACATGATTACATAA+TGG | - | chr3_3:18747549-18747568 | None:intergenic | 25.0% |
| !! | AATCATGTAGTTAGTTTAGA+TGG | + | chr3_3:18747555-18747574 | Msa0445020:three_prime_UTR | 25.0% |
| ! | AATAGTATCAGATTACATCT+AGG | - | chr3_3:18747774-18747793 | None:intergenic | 25.0% |
| ! | ATAATTACATCTCTAAGTGA+AGG | - | chr3_3:18747808-18747827 | None:intergenic | 25.0% |
| ! | AAAGAACAATGAAAAATGCT+GGG | - | chr3_3:18747873-18747892 | None:intergenic | 25.0% |
| ! | TTGATGTTTCCATTTGAATA+AGG | + | chr3_3:18747891-18747910 | Msa0445020:three_prime_UTR | 25.0% |
| ! | TGATGTTTCCATTTGAATAA+GGG | + | chr3_3:18747892-18747911 | Msa0445020:three_prime_UTR | 25.0% |
| ! | TATTTAGTCCCTTATTCAAA+TGG | - | chr3_3:18747903-18747922 | None:intergenic | 25.0% |
| ! | GATTTGAACTTCGTTTTATC+AGG | + | chr3_3:18745133-18745152 | Msa0445020:five_prime_UTR | 30.0% |
| !! | GAAAGGGAAAAATTTGTTAC+CGG | + | chr3_3:18745309-18745328 | Msa0445020:CDS | 30.0% |
| ! | GTTTTATGAATCTGTGGTTT+CGG | + | chr3_3:18745552-18745571 | Msa0445020:CDS | 30.0% |
| TTGTTTGATGTTGGAAGAAT+TGG | + | chr3_3:18745678-18745697 | Msa0445020:CDS | 30.0% | |
| ATTAAGGGATAAGAATGCAA+TGG | + | chr3_3:18745870-18745889 | Msa0445020:CDS | 30.0% | |
| ! | TGTAGCTTGTGTTTGTTTAT+TGG | + | chr3_3:18746084-18746103 | Msa0445020:intron | 30.0% |
| !! | GTTTGTTTATTGGTTCACAA+TGG | + | chr3_3:18746094-18746113 | Msa0445020:intron | 30.0% |
| !! | GTACATAAAAGTACTCAATG+TGG | - | chr3_3:18746276-18746295 | None:intergenic | 30.0% |
| AAATCGGAATATGAATTGGA+AGG | + | chr3_3:18746338-18746357 | Msa0445020:intron | 30.0% | |
| ! | GAATATGAGTTGTGTGATTT+TGG | + | chr3_3:18746360-18746379 | Msa0445020:intron | 30.0% |
| TGTGCAAAGAGAAACTTTAA+AGG | + | chr3_3:18746546-18746565 | Msa0445020:intron | 30.0% | |
| GCAATAGAAAAGCAATTAGA+CGG | - | chr3_3:18746744-18746763 | None:intergenic | 30.0% | |
| ATGTTGTGGCAAATGTTTAA+AGG | + | chr3_3:18747020-18747039 | Msa0445020:intron | 30.0% | |
| GTAAAACTGTTTGACATAGA+AGG | + | chr3_3:18747201-18747220 | Msa0445020:CDS | 30.0% | |
| ! | TTTTACAAGAGACAACTCTA+AGG | - | chr3_3:18747290-18747309 | None:intergenic | 30.0% |
| TAATGGTACAACAAGTTTCA+CGG | - | chr3_3:18747532-18747551 | None:intergenic | 30.0% | |
| AAACGTATGATCTTCATCAA+TGG | - | chr3_3:18747657-18747676 | None:intergenic | 30.0% | |
| CAAAGAACAATGAAAAATGC+TGG | - | chr3_3:18747874-18747893 | None:intergenic | 30.0% | |
| TGAATAAGGGACTAAATAAG+AGG | + | chr3_3:18747905-18747924 | Msa0445020:three_prime_UTR | 30.0% | |
| ! | TGAACTTCGTTTTATCAGGT+AGG | + | chr3_3:18745137-18745156 | Msa0445020:five_prime_UTR | 35.0% |
| TTCGTTGTTCATCCTCAAAA+CGG | + | chr3_3:18745211-18745230 | Msa0445020:five_prime_UTR | 35.0% | |
| GGTTGAAAGAAGTTGCAAAA+GGG | + | chr3_3:18745350-18745369 | Msa0445020:CDS | 35.0% | |
| ACCTTCAACTTCCGTAAATT+CGG | - | chr3_3:18745379-18745398 | None:intergenic | 35.0% | |
| GTGTGTTACATTGATGGAAT+TGG | + | chr3_3:18745441-18745460 | Msa0445020:CDS | 35.0% | |
| ! | TTACAAGTGGTGAAGTTGAT+TGG | + | chr3_3:18745517-18745536 | Msa0445020:CDS | 35.0% |
| ! | TACAAGTGGTGAAGTTGATT+GGG | + | chr3_3:18745518-18745537 | Msa0445020:CDS | 35.0% |
| !!! | TGATGGGTTTTATGAATCTG+TGG | + | chr3_3:18745546-18745565 | Msa0445020:CDS | 35.0% |
| AATCTGTGGTTTCGGATATT+GGG | + | chr3_3:18745560-18745579 | Msa0445020:CDS | 35.0% | |
| !!! | GGTTGACTATTTTAGCACAA+GGG | + | chr3_3:18745581-18745600 | Msa0445020:CDS | 35.0% |
| GTGTAAGAGGTTAGTGAAAT+TGG | + | chr3_3:18745603-18745622 | Msa0445020:CDS | 35.0% | |
| TTAGTGAAATTGGAGCTTGT+TGG | + | chr3_3:18745613-18745632 | Msa0445020:CDS | 35.0% | |
| ! | GGTTTTTGTTGATCATAGGA+TGG | + | chr3_3:18745699-18745718 | Msa0445020:CDS | 35.0% |
| ! | TTTGAGGTTTGTGTCTTGTA+AGG | + | chr3_3:18745768-18745787 | Msa0445020:CDS | 35.0% |
| CAGATAGATCGTAATCTGTT+AGG | + | chr3_3:18746179-18746198 | Msa0445020:intron | 35.0% | |
| TGTTAGGAATTAAGCCTATG+AGG | + | chr3_3:18746195-18746214 | Msa0445020:intron | 35.0% | |
| !!! | ACCTAATGGACTAGTCTTTT+GGG | - | chr3_3:18746230-18746249 | None:intergenic | 35.0% |
| !! | GTTGTGTGATTTTGGTCTAA+CGG | + | chr3_3:18746368-18746387 | Msa0445020:intron | 35.0% |
| !! | TTGTGTGATTTTGGTCTAAC+GGG | + | chr3_3:18746369-18746388 | Msa0445020:intron | 35.0% |
| TCTTTGCACATGCAAACTAA+GGG | - | chr3_3:18746536-18746555 | None:intergenic | 35.0% | |
| TTGTGGCAAATGTTTAAAGG+TGG | + | chr3_3:18747023-18747042 | Msa0445020:intron | 35.0% | |
| CAAATGTTTAAAGGTGGTTG+TGG | + | chr3_3:18747029-18747048 | Msa0445020:intron | 35.0% | |
| ! | TGTTGCTCTGATTCATTTTC+AGG | + | chr3_3:18747175-18747194 | Msa0445020:intron | 35.0% |
| !! | AATCACTGACTCTAAACCTT+CGG | - | chr3_3:18747244-18747263 | None:intergenic | 35.0% |
| TAGAGTCAGTGATTGAATCA+TGG | + | chr3_3:18747250-18747269 | Msa0445020:CDS | 35.0% | |
| ! | GGTAGAAGATGTTTTGTATC+TGG | - | chr3_3:18747384-18747403 | None:intergenic | 35.0% |
| ATCTTCTACCATCAAGTCTT+GGG | + | chr3_3:18747394-18747413 | Msa0445020:CDS | 35.0% | |
| GAAGTAAACATGGGGAAAAA+AGG | + | chr3_3:18747417-18747436 | Msa0445020:CDS | 35.0% | |
| !!! | AAGGCGGTAAATTTTTCAAG+TGG | + | chr3_3:18747436-18747455 | Msa0445020:CDS | 35.0% |
| !! | CTGAACTTGCTATATACTGT+CGG | + | chr3_3:18747467-18747486 | Msa0445020:exon | 35.0% |
| ATCAGATTACATCTAGGTGA+AGG | - | chr3_3:18747768-18747787 | None:intergenic | 35.0% | |
| GGATGAACAACGAAAGTTGA+AGG | - | chr3_3:18745205-18745224 | None:intergenic | 40.0% | |
| GTTGATACAGAGTGGTGTTT+CGG | + | chr3_3:18745271-18745290 | Msa0445020:CDS | 40.0% | |
| ! | AGAGTGGTGTTTCGGTTTTT+CGG | + | chr3_3:18745279-18745298 | Msa0445020:CDS | 40.0% |
| !! | GTTTTTCGGAGGAAGTGAAA+GGG | + | chr3_3:18745293-18745312 | Msa0445020:CDS | 40.0% |
| ACCGGTTGAAGCAATTGATA+AGG | + | chr3_3:18745327-18745346 | Msa0445020:CDS | 40.0% | |
| CCCTTATCAATTGCTTCAAC+CGG | - | chr3_3:18745331-18745350 | None:intergenic | 40.0% | |
| CCGGTTGAAGCAATTGATAA+GGG | + | chr3_3:18745328-18745347 | Msa0445020:CDS | 40.0% | |
| CGGTTGAAGCAATTGATAAG+GGG | + | chr3_3:18745329-18745348 | Msa0445020:CDS | 40.0% | |
| GGGTTGAAAGAAGTTGCAAA+AGG | + | chr3_3:18745349-18745368 | Msa0445020:CDS | 40.0% | |
| !! | CAAAAGGGTGTCCGAATTTA+CGG | + | chr3_3:18745365-18745384 | Msa0445020:CDS | 40.0% |
| TCCGAATTTACGGAAGTTGA+AGG | + | chr3_3:18745375-18745394 | Msa0445020:CDS | 40.0% | |
| TTACGGAAGTTGAAGGTAAC+TGG | + | chr3_3:18745382-18745401 | Msa0445020:CDS | 40.0% | |
| !! | AAGAGGGGTTGGTTAGTATT+GGG | + | chr3_3:18745413-18745432 | Msa0445020:CDS | 40.0% |
| ! | GGAAGAGTGTGTTACATTGA+TGG | + | chr3_3:18745435-18745454 | Msa0445020:CDS | 40.0% |
| TGTAACGACGATGTTATACG+TGG | + | chr3_3:18745475-18745494 | Msa0445020:CDS | 40.0% | |
| GGCGTGTAAGAATTTACAAG+TGG | + | chr3_3:18745504-18745523 | Msa0445020:CDS | 40.0% | |
| !! | AAGTTGATTGGGAGTGTTGA+TGG | + | chr3_3:18745529-18745548 | Msa0445020:CDS | 40.0% |
| !! | AGTTGATTGGGAGTGTTGAT+GGG | + | chr3_3:18745530-18745549 | Msa0445020:CDS | 40.0% |
| GAATCTGTGGTTTCGGATAT+TGG | + | chr3_3:18745559-18745578 | Msa0445020:CDS | 40.0% | |
| !!! | GGGTTGACTATTTTAGCACA+AGG | + | chr3_3:18745580-18745599 | Msa0445020:CDS | 40.0% |
| !! | TTTTAGCACAAGGGTGTAAG+AGG | + | chr3_3:18745590-18745609 | Msa0445020:CDS | 40.0% |
| TTCGATGGGATTAAAGCGAT+TGG | + | chr3_3:18745649-18745668 | Msa0445020:CDS | 40.0% | |
| TCGATGGGATTAAAGCGATT+GGG | + | chr3_3:18745650-18745669 | Msa0445020:CDS | 40.0% | |
| GTTGATCATAGGATGGATGA+TGG | + | chr3_3:18745706-18745725 | Msa0445020:CDS | 40.0% | |
| !! | ATCATAGGATGGATGATGGA+TGG | + | chr3_3:18745710-18745729 | Msa0445020:CDS | 40.0% |
| GCGAGAATTTGAAGACTTTG+AGG | + | chr3_3:18745752-18745771 | Msa0445020:CDS | 40.0% | |
| GTGTCTTGTAAGGTGATTGA+TGG | + | chr3_3:18745778-18745797 | Msa0445020:CDS | 40.0% | |
| ! | AAGGTGATTGATGGTAATCC+TGG | + | chr3_3:18745787-18745806 | Msa0445020:CDS | 40.0% |
| ! | GATTGATGGTAATCCTGGAT+TGG | + | chr3_3:18745792-18745811 | Msa0445020:CDS | 40.0% |
| !!! | TGCAATGGCAGCTGTTTTTT+CGG | + | chr3_3:18745885-18745904 | Msa0445020:CDS | 40.0% |
| AGGTTGTTCTTCAGGATTGT+TGG | + | chr3_3:18745926-18745945 | Msa0445020:CDS | 40.0% | |
| GGTTGTTCTTCAGGATTGTT+GGG | + | chr3_3:18745927-18745946 | Msa0445020:CDS | 40.0% | |
| GTTGTTCTTCAGGATTGTTG+GGG | + | chr3_3:18745928-18745947 | Msa0445020:CDS | 40.0% | |
| !! | GGTTTGGATGATGGTGTTTT+CGG | + | chr3_3:18745949-18745968 | Msa0445020:CDS | 40.0% |
| !!! | CACCTAATGGACTAGTCTTT+TGG | - | chr3_3:18746231-18746250 | None:intergenic | 40.0% |
| AATGTGGTACTTAAGCCATG+CGG | - | chr3_3:18746260-18746279 | None:intergenic | 40.0% | |
| GCAAACAACGTAGATTCCTA+AGG | + | chr3_3:18746427-18746446 | Msa0445020:intron | 40.0% | |
| CTTTGCACATGCAAACTAAG+GGG | - | chr3_3:18746535-18746554 | None:intergenic | 40.0% | |
| CTCTTTGCACATGCAAACTA+AGG | - | chr3_3:18746537-18746556 | None:intergenic | 40.0% | |
| !! | ATTGCGCTTTGTTGTTGTTG+TGG | + | chr3_3:18746759-18746778 | Msa0445020:intron | 40.0% |
| ! | ATGAAAGTGTGTCCAATCTC+TGG | + | chr3_3:18747077-18747096 | Msa0445020:intron | 40.0% |
| ! | TGAAAGTGTGTCCAATCTCT+GGG | + | chr3_3:18747078-18747097 | Msa0445020:intron | 40.0% |
| GTCAGTGATTGAATCATGGA+AGG | + | chr3_3:18747254-18747273 | Msa0445020:CDS | 40.0% | |
| CTCTTTGAGCGTGGTAAATA+AGG | - | chr3_3:18747349-18747368 | None:intergenic | 40.0% | |
| CATCTTCTACCATCAAGTCT+TGG | + | chr3_3:18747393-18747412 | Msa0445020:CDS | 40.0% | |
| TCTTCTACCATCAAGTCTTG+GGG | + | chr3_3:18747395-18747414 | Msa0445020:CDS | 40.0% | |
| TTTACTTCCCCAAGACTTGA+TGG | - | chr3_3:18747405-18747424 | None:intergenic | 40.0% | |
| AAGTCTTGGGGAAGTAAACA+TGG | + | chr3_3:18747407-18747426 | Msa0445020:CDS | 40.0% | |
| AGTCTTGGGGAAGTAAACAT+GGG | + | chr3_3:18747408-18747427 | Msa0445020:CDS | 40.0% | |
| GTAAACATGGGGAAAAAAGG+CGG | + | chr3_3:18747420-18747439 | Msa0445020:CDS | 40.0% | |
| CGACAGTATATAGCAAGTTC+AGG | - | chr3_3:18747469-18747488 | None:intergenic | 40.0% | |
| !! | ATCAAAACGACGCCGTTTTG+AGG | - | chr3_3:18745226-18745245 | None:intergenic | 45.0% |
| CAACCCGCATTGAAACTACA+CGG | - | chr3_3:18745255-18745274 | None:intergenic | 45.0% | |
| !! | GGTTTTTCGGAGGAAGTGAA+AGG | + | chr3_3:18745292-18745311 | Msa0445020:CDS | 45.0% |
| GGAAGTTGAAGGTAACTGGT+GGG | + | chr3_3:18745386-18745405 | Msa0445020:CDS | 45.0% | |
| !! | GAAGAGGGGTTGGTTAGTAT+TGG | + | chr3_3:18745412-18745431 | Msa0445020:CDS | 45.0% |
| !! | AGAGGGGTTGGTTAGTATTG+GGG | + | chr3_3:18745414-18745433 | Msa0445020:CDS | 45.0% |
| CGATGTTATACGTGGTGTAG+CGG | + | chr3_3:18745483-18745502 | Msa0445020:CDS | 45.0% | |
| !! | TTGGAGCTTGTTGGTTGTGA+AGG | + | chr3_3:18745622-18745641 | Msa0445020:CDS | 45.0% |
| !! | TGGAGCTTGTTGGTTGTGAA+GGG | + | chr3_3:18745623-18745642 | Msa0445020:CDS | 45.0% |
| GTTGTGAAGGGAGTTTCGAT+GGG | + | chr3_3:18745635-18745654 | Msa0445020:CDS | 45.0% | |
| CGATGGGATTAAAGCGATTG+GGG | + | chr3_3:18745651-18745670 | Msa0445020:CDS | 45.0% | |
| !! | ATGGATGATGGATGGTTAGC+TGG | + | chr3_3:18745718-18745737 | Msa0445020:CDS | 45.0% |
| ! | TGATGGTAATCCTGGATTGG+AGG | + | chr3_3:18745795-18745814 | Msa0445020:CDS | 45.0% |
| ! | TCCTGGATTGGAGGAACATT+TGG | + | chr3_3:18745804-18745823 | Msa0445020:CDS | 45.0% |
| ! | CCTGGATTGGAGGAACATTT+GGG | + | chr3_3:18745805-18745824 | Msa0445020:CDS | 45.0% |
| ! | CTGGATTGGAGGAACATTTG+GGG | + | chr3_3:18745806-18745825 | Msa0445020:CDS | 45.0% |
| ! | TTCGGTTTGTAGAGCTGCTA+AGG | + | chr3_3:18745903-18745922 | Msa0445020:CDS | 45.0% |
| TGCTAAGGAGGTTGTTCTTC+AGG | + | chr3_3:18745918-18745937 | Msa0445020:CDS | 45.0% | |
| TCTTCAGGATTGTTGGGGTT+TGG | + | chr3_3:18745933-18745952 | Msa0445020:CDS | 45.0% | |
| GATTGTTGGGGTTTGGATGA+TGG | + | chr3_3:18745940-18745959 | Msa0445020:CDS | 45.0% | |
| !! | GGATGATGGTGTTTTCGGTT+TGG | + | chr3_3:18745954-18745973 | Msa0445020:CDS | 45.0% |
| !!! | ATGGACTAGTCTTTTGGGCT+GGG | - | chr3_3:18746225-18746244 | None:intergenic | 45.0% |
| !!! | AATGGACTAGTCTTTTGGGC+TGG | - | chr3_3:18746226-18746245 | None:intergenic | 45.0% |
| ! | GCCCAAAAGACTAGTCCATT+AGG | + | chr3_3:18746226-18746245 | Msa0445020:intron | 45.0% |
| ! | GAAAGTGTGTCCAATCTCTG+GGG | + | chr3_3:18747079-18747098 | Msa0445020:intron | 45.0% |
| AAAGTGTGTCCAATCTCTGG+GGG | + | chr3_3:18747080-18747099 | Msa0445020:intron | 45.0% | |
| CATAAGAAACCCCCAGAGAT+TGG | - | chr3_3:18747092-18747111 | None:intergenic | 45.0% | |
| CCATTTCAACTCTTTGAGCG+TGG | - | chr3_3:18747358-18747377 | None:intergenic | 45.0% | |
| CCACGCTCAAAGAGTTGAAA+TGG | + | chr3_3:18747355-18747374 | Msa0445020:CDS | 45.0% | |
| CGCTCAAAGAGTTGAAATGG+AGG | + | chr3_3:18747358-18747377 | Msa0445020:CDS | 45.0% | |
| GTCTTGGGGAAGTAAACATG+GGG | + | chr3_3:18747409-18747428 | Msa0445020:CDS | 45.0% | |
| TACTGAAAGTTGACGACGAC+TGG | + | chr3_3:18747587-18747606 | Msa0445020:three_prime_UTR | 45.0% | |
| CGCACCGTGTAGTTTCAATG+CGG | + | chr3_3:18745248-18745267 | Msa0445020:exon | 50.0% | |
| GCACCGTGTAGTTTCAATGC+GGG | + | chr3_3:18745249-18745268 | Msa0445020:exon | 50.0% | |
| !! | CAATGCGGGTTGATACAGAG+TGG | + | chr3_3:18745263-18745282 | Msa0445020:exon | 50.0% |
| !! | GTGGTGTTTCGGTTTTTCGG+AGG | + | chr3_3:18745282-18745301 | Msa0445020:CDS | 50.0% |
| CGGAAGTTGAAGGTAACTGG+TGG | + | chr3_3:18745385-18745404 | Msa0445020:CDS | 50.0% | |
| GTAACTGGTGGGAGTGAAGA+GGG | + | chr3_3:18745397-18745416 | Msa0445020:CDS | 50.0% | |
| TAACTGGTGGGAGTGAAGAG+GGG | + | chr3_3:18745398-18745417 | Msa0445020:CDS | 50.0% | |
| GGTTGTGAAGGGAGTTTCGA+TGG | + | chr3_3:18745634-18745653 | Msa0445020:CDS | 50.0% | |
| !! | TGGGGCGTGTTGTTTGATGT+TGG | + | chr3_3:18745669-18745688 | Msa0445020:CDS | 50.0% |
| CCCAAATGTTCCTCCAATCC+AGG | - | chr3_3:18745808-18745827 | None:intergenic | 50.0% | |
| GGTTTGTAGAGCTGCTAAGG+AGG | + | chr3_3:18745906-18745925 | Msa0445020:CDS | 50.0% | |
| !! | TCGGTTTGGCTGTTGTTTGC+AGG | + | chr3_3:18745968-18745987 | Msa0445020:CDS | 50.0% |
| TGCTCGTTGCTTACAACCGA+AGG | + | chr3_3:18747225-18747244 | Msa0445020:CDS | 50.0% | |
| GTAAATAAGGTCGCGAGTGC+AGG | - | chr3_3:18747336-18747355 | None:intergenic | 50.0% | |
| GACTCACTGCAGTCAGAGAT+CGG | - | chr3_3:18747724-18747743 | None:intergenic | 50.0% | |
| GGGAGTAAAGTCACTCAGCA+TGG | - | chr3_3:18747853-18747872 | None:intergenic | 50.0% | |
| GGTAACTGGTGGGAGTGAAG+AGG | + | chr3_3:18745396-18745415 | Msa0445020:CDS | 55.0% | |
| CATGCGGCTCTCTCACCTAA+TGG | - | chr3_3:18746244-18746263 | None:intergenic | 55.0% | |
| CATTAGGTGAGAGAGCCGCA+TGG | + | chr3_3:18746242-18746261 | Msa0445020:intron | 55.0% | |
| TCACTCAGCATGGAGTGAGC+TGG | - | chr3_3:18747843-18747862 | None:intergenic | 55.0% | |
| TGGTGGGAGTGAAGAGGGGT+TGG | + | chr3_3:18745402-18745421 | Msa0445020:CDS | 60.0% | |
| ! | TTGGGCTGGGCTCACCTCAT+AGG | - | chr3_3:18746212-18746231 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 18745111 | 18747951 | 18745111 | ID=Msa0445020;Name=Msa0445020 |
| chr3_3 | mRNA | 18745111 | 18747951 | 18745111 | ID=Msa0445020-mRNA-1;Parent=Msa0445020;Name=Msa0445020-mRNA-1;_AED=0.00;_eAED=0.00;_QI=154|1|1|1|1|1|2|481|332 |
| chr3_3 | exon | 18745111 | 18745989 | 18745111 | ID=Msa0445020-mRNA-1:exon:3946;Parent=Msa0445020-mRNA-1 |
| chr3_3 | exon | 18747197 | 18747951 | 18747197 | ID=Msa0445020-mRNA-1:exon:3947;Parent=Msa0445020-mRNA-1 |
| chr3_3 | five_prime_UTR | 18745111 | 18745264 | 18745111 | ID=Msa0445020-mRNA-1:five_prime_utr;Parent=Msa0445020-mRNA-1 |
| chr3_3 | CDS | 18745265 | 18745989 | 18745265 | ID=Msa0445020-mRNA-1:cds;Parent=Msa0445020-mRNA-1 |
| chr3_3 | CDS | 18747197 | 18747470 | 18747197 | ID=Msa0445020-mRNA-1:cds;Parent=Msa0445020-mRNA-1 |
| chr3_3 | three_prime_UTR | 18747471 | 18747951 | 18747471 | ID=Msa0445020-mRNA-1:three_prime_utr;Parent=Msa0445020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
