Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0874570 | KEH25123.1 | 95.238 | 105 | 5 | 0 | 1 | 105 | 2 | 106 | 1.02e-55 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0874570 | A0A072U7M0 | 95.238 | 105 | 5 | 0 | 1 | 105 | 2 | 106 | 4.87e-56 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012040 | Msa0874570 | 0.817220 | 3.692579e-52 | -8.615850e-47 |
| Msa0013050 | Msa0874570 | -0.803645 | 3.158139e-49 | -8.615850e-47 |
| Msa0032610 | Msa0874570 | 0.817920 | 2.567522e-52 | -8.615850e-47 |
| Msa0032840 | Msa0874570 | -0.802177 | 6.348045e-49 | -8.615850e-47 |
| Msa0044710 | Msa0874570 | 0.820084 | 8.266098e-53 | -8.615850e-47 |
| Msa0047980 | Msa0874570 | 0.815757 | 7.848651e-52 | -8.615850e-47 |
| Msa0050730 | Msa0874570 | 0.801469 | 8.872411e-49 | -8.615850e-47 |
| Msa0069310 | Msa0874570 | 0.801700 | 7.955962e-49 | -8.615850e-47 |
| Msa0085360 | Msa0874570 | -0.817130 | 3.867893e-52 | -8.615850e-47 |
| Msa0090030 | Msa0874570 | 0.801148 | 1.032438e-48 | -8.615850e-47 |
| Msa0091570 | Msa0874570 | 0.834223 | 3.393741e-56 | -8.615850e-47 |
| Msa0094920 | Msa0874570 | 0.830962 | 2.184830e-55 | -8.615850e-47 |
| Msa0095380 | Msa0874570 | 0.831391 | 1.713872e-55 | -8.615850e-47 |
| Msa0096940 | Msa0874570 | -0.808609 | 2.847511e-50 | -8.615850e-47 |
| Msa0099510 | Msa0874570 | 0.805525 | 1.280061e-49 | -8.615850e-47 |
| Msa0105700 | Msa0874570 | 0.801904 | 7.225712e-49 | -8.615850e-47 |
| Msa0106520 | Msa0874570 | 0.806295 | 8.819102e-50 | -8.615850e-47 |
| Msa0114540 | Msa0874570 | -0.810744 | 9.898844e-51 | -8.615850e-47 |
| Msa0115390 | Msa0874570 | 0.819067 | 1.410816e-52 | -8.615850e-47 |
| Msa0609630 | Msa0874570 | 0.805876 | 1.080299e-49 | -8.615850e-47 |
| Msa0610370 | Msa0874570 | 0.800100 | 1.688681e-48 | -8.615850e-47 |
| Msa0618010 | Msa0874570 | 0.810506 | 1.114185e-50 | -8.615850e-47 |
| Msa0623080 | Msa0874570 | 0.825630 | 4.221743e-54 | -8.615850e-47 |
| Msa0623700 | Msa0874570 | 0.812034 | 5.194926e-51 | -8.615850e-47 |
| Msa0627910 | Msa0874570 | 0.843055 | 1.772228e-58 | -8.615850e-47 |
| Msa0638280 | Msa0874570 | 0.817163 | 3.802565e-52 | -8.615850e-47 |
| Msa0638320 | Msa0874570 | 0.811539 | 6.655939e-51 | -8.615850e-47 |
| Msa0647450 | Msa0874570 | -0.816237 | 6.134106e-52 | -8.615850e-47 |
| Msa0654010 | Msa0874570 | 0.804995 | 1.652864e-49 | -8.615850e-47 |
| Msa0669850 | Msa0874570 | 0.844201 | 8.755429e-59 | -8.615850e-47 |
| Msa0673470 | Msa0874570 | 0.808436 | 3.100607e-50 | -8.615850e-47 |
| Msa0677270 | Msa0874570 | 0.814574 | 1.437719e-51 | -8.615850e-47 |
| Msa0680240 | Msa0874570 | 0.817312 | 3.520514e-52 | -8.615850e-47 |
| Msa0689010 | Msa0874570 | 0.809593 | 1.752447e-50 | -8.615850e-47 |
| Msa0690250 | Msa0874570 | 0.825514 | 4.496262e-54 | -8.615850e-47 |
| Msa0692110 | Msa0874570 | 0.826943 | 2.054881e-54 | -8.615850e-47 |
| Msa0705600 | Msa0874570 | 0.801706 | 7.932282e-49 | -8.615850e-47 |
| Msa0711490 | Msa0874570 | 0.811756 | 5.970856e-51 | -8.615850e-47 |
| Msa0734660 | Msa0874570 | 0.831712 | 1.429268e-55 | -8.615850e-47 |
| Msa0743260 | Msa0874570 | 0.851243 | 1.007655e-60 | -8.615850e-47 |
| Msa0755340 | Msa0874570 | 0.806437 | 8.228377e-50 | -8.615850e-47 |
| Msa0775260 | Msa0874570 | 0.830673 | 2.571907e-55 | -8.615850e-47 |
| Msa0776220 | Msa0874570 | 0.817325 | 3.496697e-52 | -8.615850e-47 |
| Msa0784860 | Msa0874570 | 0.802270 | 6.074989e-49 | -8.615850e-47 |
| Msa0790390 | Msa0874570 | -0.819920 | 9.013857e-53 | -8.615850e-47 |
| Msa0791820 | Msa0874570 | 0.816802 | 4.582883e-52 | -8.615850e-47 |
| Msa0791910 | Msa0874570 | 0.807101 | 5.957902e-50 | -8.615850e-47 |
| Msa0792090 | Msa0874570 | 0.827841 | 1.252245e-54 | -8.615850e-47 |
| Msa0806920 | Msa0874570 | 0.821565 | 3.772943e-53 | -8.615850e-47 |
| Msa0813670 | Msa0874570 | 0.805250 | 1.461857e-49 | -8.615850e-47 |
| Msa0813720 | Msa0874570 | 0.829313 | 5.519989e-55 | -8.615850e-47 |
| Msa0831870 | Msa0874570 | 0.820671 | 6.064702e-53 | -8.615850e-47 |
| Msa0121590 | Msa0874570 | 0.801921 | 7.167257e-49 | -8.615850e-47 |
| Msa0137820 | Msa0874570 | 0.803452 | 3.463113e-49 | -8.615850e-47 |
| Msa0143080 | Msa0874570 | 0.809781 | 1.596534e-50 | -8.615850e-47 |
| Msa0144970 | Msa0874570 | -0.803202 | 3.901316e-49 | -8.615850e-47 |
| Msa0145950 | Msa0874570 | 0.802681 | 4.999236e-49 | -8.615850e-47 |
| Msa0148120 | Msa0874570 | 0.840933 | 6.450593e-58 | -8.615850e-47 |
| Msa0156650 | Msa0874570 | -0.819270 | 1.268312e-52 | -8.615850e-47 |
| Msa0162770 | Msa0874570 | -0.822888 | 1.861533e-53 | -8.615850e-47 |
| Msa0168640 | Msa0874570 | -0.802300 | 5.990298e-49 | -8.615850e-47 |
| Msa0172350 | Msa0874570 | 0.809545 | 1.794502e-50 | -8.615850e-47 |
| Msa0172780 | Msa0874570 | 0.812148 | 4.904990e-51 | -8.615850e-47 |
| Msa0173740 | Msa0874570 | 0.800392 | 1.472791e-48 | -8.615850e-47 |
| Msa0183460 | Msa0874570 | 0.803511 | 3.366456e-49 | -8.615850e-47 |
| Msa0186310 | Msa0874570 | 0.805338 | 1.400720e-49 | -8.615850e-47 |
| Msa0188680 | Msa0874570 | -0.812565 | 3.977460e-51 | -8.615850e-47 |
| Msa0222920 | Msa0874570 | 0.819733 | 9.944765e-53 | -8.615850e-47 |
| Msa0223290 | Msa0874570 | 0.813077 | 3.071948e-51 | -8.615850e-47 |
| Msa0223380 | Msa0874570 | 0.826374 | 2.809216e-54 | -8.615850e-47 |
| Msa0230550 | Msa0874570 | -0.807558 | 4.767221e-50 | -8.615850e-47 |
| Msa0236270 | Msa0874570 | 0.808649 | 2.791517e-50 | -8.615850e-47 |
| Msa0236980 | Msa0874570 | 0.834699 | 2.577208e-56 | -8.615850e-47 |
| Msa0365490 | Msa0874570 | 0.802315 | 5.946737e-49 | -8.615850e-47 |
| Msa0368660 | Msa0874570 | 0.809009 | 2.338424e-50 | -8.615850e-47 |
| Msa0372340 | Msa0874570 | 0.805005 | 1.644439e-49 | -8.615850e-47 |
| Msa0377530 | Msa0874570 | 0.822257 | 2.609558e-53 | -8.615850e-47 |
| Msa0380040 | Msa0874570 | 0.888411 | 6.045556e-73 | -8.615850e-47 |
| Msa0389810 | Msa0874570 | 0.809039 | 2.303737e-50 | -8.615850e-47 |
| Msa0402330 | Msa0874570 | 0.801380 | 9.254297e-49 | -8.615850e-47 |
| Msa0414950 | Msa0874570 | -0.829039 | 6.431858e-55 | -8.615850e-47 |
| Msa0416400 | Msa0874570 | 0.820503 | 6.627487e-53 | -8.615850e-47 |
| Msa0419520 | Msa0874570 | 0.801618 | 8.269249e-49 | -8.615850e-47 |
| Msa0421780 | Msa0874570 | -0.831992 | 1.218725e-55 | -8.615850e-47 |
| Msa0426810 | Msa0874570 | 0.807170 | 5.759683e-50 | -8.615850e-47 |
| Msa0429290 | Msa0874570 | 0.873277 | 1.665827e-67 | -8.615850e-47 |
| Msa0429950 | Msa0874570 | 0.813250 | 2.814998e-51 | -8.615850e-47 |
| Msa0445020 | Msa0874570 | 0.821379 | 4.166516e-53 | -8.615850e-47 |
| Msa0449820 | Msa0874570 | 0.802406 | 5.696640e-49 | -8.615850e-47 |
| Msa0465790 | Msa0874570 | 0.803540 | 3.319674e-49 | -8.615850e-47 |
| Msa0467900 | Msa0874570 | -0.817928 | 2.557222e-52 | -8.615850e-47 |
| Msa0467960 | Msa0874570 | -0.840859 | 6.745825e-58 | -8.615850e-47 |
| Msa0468130 | Msa0874570 | 0.819413 | 1.176990e-52 | -8.615850e-47 |
| Msa0468160 | Msa0874570 | 0.807217 | 5.629918e-50 | -8.615850e-47 |
| Msa0469910 | Msa0874570 | -0.816757 | 4.691796e-52 | -8.615850e-47 |
| Msa0473240 | Msa0874570 | 0.807048 | 6.114608e-50 | -8.615850e-47 |
| Msa0475580 | Msa0874570 | 0.870876 | 1.047913e-66 | -8.615850e-47 |
| Msa0480320 | Msa0874570 | 0.861336 | 1.101795e-63 | -8.615850e-47 |
| Msa0242680 | Msa0874570 | 0.804351 | 2.251727e-49 | -8.615850e-47 |
| Msa0244270 | Msa0874570 | 0.821947 | 3.079817e-53 | -8.615850e-47 |
| Msa0260210 | Msa0874570 | 0.825974 | 3.497354e-54 | -8.615850e-47 |
| Msa0265820 | Msa0874570 | 0.801149 | 1.031846e-48 | -8.615850e-47 |
| Msa0267760 | Msa0874570 | 0.807893 | 4.045292e-50 | -8.615850e-47 |
| Msa0269450 | Msa0874570 | 0.800552 | 1.366083e-48 | -8.615850e-47 |
| Msa0270220 | Msa0874570 | -0.818059 | 2.388427e-52 | -8.615850e-47 |
| Msa0275030 | Msa0874570 | 0.803224 | 3.860932e-49 | -8.615850e-47 |
| Msa0282250 | Msa0874570 | 0.823107 | 1.654564e-53 | -8.615850e-47 |
| Msa0288240 | Msa0874570 | 0.805220 | 1.483186e-49 | -8.615850e-47 |
| Msa0296760 | Msa0874570 | 0.800469 | 1.420519e-48 | -8.615850e-47 |
| Msa0302650 | Msa0874570 | 0.815378 | 9.530925e-52 | -8.615850e-47 |
| Msa0304290 | Msa0874570 | 0.828495 | 8.707421e-55 | -8.615850e-47 |
| Msa0304330 | Msa0874570 | 0.831741 | 1.405688e-55 | -8.615850e-47 |
| Msa0305890 | Msa0874570 | 0.818582 | 1.817746e-52 | -8.615850e-47 |
| Msa0307830 | Msa0874570 | -0.815911 | 7.252077e-52 | -8.615850e-47 |
| Msa0315240 | Msa0874570 | 0.806208 | 9.196749e-50 | -8.615850e-47 |
| Msa0328210 | Msa0874570 | 0.843220 | 1.601914e-58 | -8.615850e-47 |
| Msa0335040 | Msa0874570 | 0.831204 | 1.906116e-55 | -8.615850e-47 |
| Msa0340810 | Msa0874570 | 0.814799 | 1.281353e-51 | -8.615850e-47 |
| Msa0344640 | Msa0874570 | 0.804749 | 1.860423e-49 | -8.615850e-47 |
| Msa0344830 | Msa0874570 | 0.825187 | 5.374652e-54 | -8.615850e-47 |
| Msa0358170 | Msa0874570 | 0.816232 | 6.150065e-52 | -8.615850e-47 |
| Msa0488270 | Msa0874570 | 0.826179 | 3.127103e-54 | -8.615850e-47 |
| Msa0500720 | Msa0874570 | 0.807851 | 4.131172e-50 | -8.615850e-47 |
| Msa0505060 | Msa0874570 | 0.814577 | 1.434940e-51 | -8.615850e-47 |
| Msa0508200 | Msa0874570 | 0.800972 | 1.121299e-48 | -8.615850e-47 |
| Msa0509390 | Msa0874570 | 0.804692 | 1.912346e-49 | -8.615850e-47 |
| Msa0517490 | Msa0874570 | 0.834909 | 2.281750e-56 | -8.615850e-47 |
| Msa0519220 | Msa0874570 | 0.878245 | 3.283368e-69 | -8.615850e-47 |
| Msa0521880 | Msa0874570 | 0.806270 | 8.925606e-50 | -8.615850e-47 |
| Msa0526710 | Msa0874570 | 0.812639 | 3.831100e-51 | -8.615850e-47 |
| Msa0530850 | Msa0874570 | 0.821626 | 3.653724e-53 | -8.615850e-47 |
| Msa0535030 | Msa0874570 | 0.825975 | 3.496865e-54 | -8.615850e-47 |
| Msa0535060 | Msa0874570 | 0.825320 | 5.000162e-54 | -8.615850e-47 |
| Msa0553150 | Msa0874570 | 0.800296 | 1.540583e-48 | -8.615850e-47 |
| Msa0553220 | Msa0874570 | -0.830919 | 2.238430e-55 | -8.615850e-47 |
| Msa0555950 | Msa0874570 | 0.802474 | 5.514283e-49 | -8.615850e-47 |
| Msa0562440 | Msa0874570 | 0.820648 | 6.138412e-53 | -8.615850e-47 |
| Msa0577220 | Msa0874570 | 0.808803 | 2.588111e-50 | -8.615850e-47 |
| Msa0579290 | Msa0874570 | 0.824719 | 6.932079e-54 | -8.615850e-47 |
| Msa0579390 | Msa0874570 | 0.821785 | 3.357530e-53 | -8.615850e-47 |
| Msa0581920 | Msa0874570 | 0.804281 | 2.329488e-49 | -8.615850e-47 |
| Msa0585900 | Msa0874570 | 0.800638 | 1.312145e-48 | -8.615850e-47 |
| Msa0587690 | Msa0874570 | 0.812074 | 5.090697e-51 | -8.615850e-47 |
| Msa0591060 | Msa0874570 | 0.833609 | 4.832502e-56 | -8.615850e-47 |
| Msa0591770 | Msa0874570 | 0.859650 | 3.570725e-63 | -8.615850e-47 |
| Msa0594910 | Msa0874570 | 0.821089 | 4.860764e-53 | -8.615850e-47 |
| Msa0853170 | Msa0874570 | 0.816310 | 5.907252e-52 | -8.615850e-47 |
| Msa0854120 | Msa0874570 | 0.804440 | 2.158146e-49 | -8.615850e-47 |
| Msa0855430 | Msa0874570 | 0.805746 | 1.150465e-49 | -8.615850e-47 |
| Msa0860080 | Msa0874570 | 0.803509 | 3.370514e-49 | -8.615850e-47 |
| Msa0860900 | Msa0874570 | -0.801839 | 7.449888e-49 | -8.615850e-47 |
| Msa0863370 | Msa0874570 | 0.807080 | 6.020522e-50 | -8.615850e-47 |
| Msa0863450 | Msa0874570 | 0.807756 | 4.327520e-50 | -8.615850e-47 |
| Msa0863870 | Msa0874570 | 0.800157 | 1.644026e-48 | -8.615850e-47 |
| Msa0866120 | Msa0874570 | 0.833122 | 6.392077e-56 | -8.615850e-47 |
| Msa0874360 | Msa0874570 | 0.845768 | 3.305102e-59 | -8.615850e-47 |
| Msa0874500 | Msa0874570 | 0.890332 | 1.084692e-73 | -8.615850e-47 |
| Msa0874570 | Msa0882510 | 0.806336 | 8.641835e-50 | -8.615850e-47 |
| Msa0874570 | Msa0883030 | 0.810166 | 1.319390e-50 | -8.615850e-47 |
| Msa0874570 | Msa0900630 | 0.809205 | 2.122866e-50 | -8.615850e-47 |
| Msa0874570 | Msa0908170 | 0.818295 | 2.111959e-52 | -8.615850e-47 |
| Msa0874570 | Msa0909000 | -0.812527 | 4.053986e-51 | -8.615850e-47 |
| Msa0874570 | Msa0926460 | 0.804149 | 2.481182e-49 | -8.615850e-47 |
| Msa0874570 | Msa0933290 | 0.812037 | 5.186406e-51 | -8.615850e-47 |
| Msa0874570 | Msa0974530 | 0.806647 | 7.433201e-50 | -8.615850e-47 |
| Msa0874570 | Msa0976250 | 0.837569 | 4.810068e-57 | -8.615850e-47 |
| Msa0874570 | Msa0982270 | 0.809385 | 1.942603e-50 | -8.615850e-47 |
| Msa0874570 | Msa0992490 | -0.805934 | 1.050369e-49 | -8.615850e-47 |
| Msa0874570 | Msa0996080 | 0.810363 | 1.196506e-50 | -8.615850e-47 |
| Msa0874570 | Msa1000940 | 0.805506 | 1.291756e-49 | -8.615850e-47 |
| Msa0874570 | Msa1001580 | 0.825234 | 5.239620e-54 | -8.615850e-47 |
| Msa0874570 | Msa1004900 | -0.801741 | 7.804677e-49 | -8.615850e-47 |
| Msa0874570 | Msa1010800 | 0.801045 | 1.083336e-48 | -8.615850e-47 |
| Msa0874570 | Msa1015060 | 0.839572 | 1.462573e-57 | -8.615850e-47 |
| Msa0874570 | Msa1026760 | 0.823656 | 1.231418e-53 | -8.615850e-47 |
| Msa0874570 | Msa1026790 | 0.816613 | 5.053441e-52 | -8.615850e-47 |
| Msa0874570 | Msa1039880 | 0.807151 | 5.813087e-50 | -8.615850e-47 |
| Msa0874570 | Msa1046300 | 0.803740 | 3.017216e-49 | -8.615850e-47 |
| Msa0874570 | Msa1047400 | 0.834315 | 3.217439e-56 | -8.615850e-47 |
| Msa0874570 | Msa1050200 | 0.825226 | 5.262508e-54 | -8.615850e-47 |
| Msa0874570 | Msa1069660 | -0.809352 | 1.974159e-50 | -8.615850e-47 |
| Msa0874570 | Msa1072460 | -0.823330 | 1.468372e-53 | -8.615850e-47 |
| Msa0874570 | Msa1079370 | -0.805406 | 1.355412e-49 | -8.615850e-47 |
| Msa0874570 | Msa1084470 | 0.805672 | 1.192425e-49 | -8.615850e-47 |
| Msa0874570 | Msa1085920 | 0.811334 | 7.372763e-51 | -8.615850e-47 |
| Msa0874570 | Msa1087470 | 0.800615 | 1.326215e-48 | -8.615850e-47 |
| Msa0874570 | Msa1089840 | 0.805433 | 1.338186e-49 | -8.615850e-47 |
| Msa0874570 | Msa1092820 | 0.809106 | 2.229087e-50 | -8.615850e-47 |
| Msa0874570 | Msa1095480 | 0.810482 | 1.127852e-50 | -8.615850e-47 |
| Msa0874570 | Msa1100720 | 0.817018 | 4.098353e-52 | -8.615850e-47 |
| Msa0874570 | Msa1109570 | 0.848169 | 7.274882e-60 | -8.615850e-47 |
| Msa0874570 | Msa1111700 | 0.810484 | 1.126327e-50 | -8.615850e-47 |
| Msa0874570 | Msa1113200 | 0.801221 | 9.971783e-49 | -8.615850e-47 |
| Msa0874570 | Msa1126120 | -0.805596 | 1.237015e-49 | -8.615850e-47 |
| Msa0874570 | Msa1151710 | 0.817566 | 3.086099e-52 | -8.615850e-47 |
| Msa0874570 | Msa1171770 | -0.812346 | 4.439224e-51 | -8.615850e-47 |
| Msa0874570 | Msa1171870 | 0.826117 | 3.234386e-54 | -8.615850e-47 |
| Msa0874570 | Msa1175330 | 0.814922 | 1.203884e-51 | -8.615850e-47 |
| Msa0874570 | Msa1178610 | 0.821977 | 3.030255e-53 | -8.615850e-47 |
| Msa0874570 | Msa1193950 | -0.814911 | 1.210582e-51 | -8.615850e-47 |
| Msa0874570 | Msa1199560 | 0.802466 | 5.535269e-49 | -8.615850e-47 |
| Msa0874570 | Msa1211150 | -0.812058 | 5.132788e-51 | -8.615850e-47 |
| Msa0874570 | Msa1217830 | 0.802064 | 6.698813e-49 | -8.615850e-47 |
| Msa0874570 | Msa1219430 | 0.809032 | 2.312441e-50 | -8.615850e-47 |
| Msa0874570 | Msa1235630 | 0.815968 | 7.042604e-52 | -8.615850e-47 |
| Msa0874570 | Msa1237030 | 0.842017 | 3.342647e-58 | -8.615850e-47 |
| Msa0874570 | Msa1267260 | 0.809186 | 2.143358e-50 | -8.615850e-47 |
| Msa0874570 | Msa1269300 | 0.807115 | 5.917727e-50 | -8.615850e-47 |
| Msa0874570 | Msa1280130 | 0.817196 | 3.738214e-52 | -8.615850e-47 |
| Msa0874570 | Msa1291350 | 0.805589 | 1.240699e-49 | -8.615850e-47 |
| Msa0874570 | Msa1300350 | -0.823766 | 1.160637e-53 | -8.615850e-47 |
| Msa0874570 | Msa1303160 | 0.835479 | 1.638587e-56 | -8.615850e-47 |
| Msa0874570 | Msa1306430 | 0.826704 | 2.344568e-54 | -8.615850e-47 |
| Msa0874570 | Msa1307740 | 0.809294 | 2.031814e-50 | -8.615850e-47 |
| Msa0874570 | Msa1333990 | 0.816115 | 6.530464e-52 | -8.615850e-47 |
| Msa0874570 | Msa1340650 | 0.820421 | 6.921008e-53 | -8.615850e-47 |
| Msa0874570 | Msa1362510 | 0.801068 | 1.071688e-48 | -8.615850e-47 |
| Msa0874570 | Msa1362880 | 0.803846 | 2.868057e-49 | -8.615850e-47 |
| Msa0874570 | Msa1369530 | 0.828190 | 1.031876e-54 | -8.615850e-47 |
| Msa0874570 | Msa1371430 | 0.800003 | 1.766835e-48 | -8.615850e-47 |
| Msa0874570 | Msa1382410 | 0.802939 | 4.420658e-49 | -8.615850e-47 |
| Msa0874570 | Msa1393740 | 0.806834 | 6.787021e-50 | -8.615850e-47 |
| Msa0874570 | Msa1397810 | 0.805915 | 1.060038e-49 | -8.615850e-47 |
| Msa0874570 | Msa1403580 | -0.826469 | 2.667083e-54 | -8.615850e-47 |
| Msa0874570 | Msa1403930 | -0.839519 | 1.509706e-57 | -8.615850e-47 |
| Msa0874570 | Msa1405810 | 0.803558 | 3.291205e-49 | -8.615850e-47 |
| Msa0874570 | Msa1408790 | 0.810868 | 9.307389e-51 | -8.615850e-47 |
| Msa0874570 | Msa1427830 | 0.809570 | 1.772375e-50 | -8.615850e-47 |
| Msa0874570 | Msa1431040 | 0.810993 | 8.745371e-51 | -8.615850e-47 |
| Msa0874570 | Msa1432640 | 0.805442 | 1.332125e-49 | -8.615850e-47 |
| Msa0874570 | Msa1436040 | 0.802913 | 4.476764e-49 | -8.615850e-47 |
| Msa0874570 | Msa1443290 | -0.818820 | 1.605792e-52 | -8.615850e-47 |
| Msa0874570 | Msa1454110 | 0.815718 | 8.006435e-52 | -8.615850e-47 |
| Msa0874570 | Msa1456650 | 0.800688 | 1.281406e-48 | -8.615850e-47 |
| Msa0874570 | Msa1465960 | 0.828589 | 8.268002e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0874570 | MtrunA17_Chr6g0455241 | 96.552 | 87 | 3 | 0 | 19 | 105 | 56 | 142 | 1.67e-58 | 176 |
| Msa0874570 | MtrunA17_Chr6g0455271 | 93.750 | 96 | 6 | 0 | 1 | 96 | 2 | 97 | 1.49e-50 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 21 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGCTTGCCTTCTCAAAA+TGG | 0.248342 | 6_1:-10375052 | Msa0874570:CDS |
| TCATGCAGCAAGAATGCTTT+TGG | 0.265450 | 6_1:-10375155 | Msa0874570:CDS |
| ACAACATCATTGAAGATAAA+AGG | 0.287321 | 6_1:-10375241 | Msa0874570:CDS |
| TTGTCTGATCAACAATGATT+TGG | 0.352096 | 6_1:-10375203 | Msa0874570:CDS |
| GTTAAGTGTCCTCCAGTTCA+AGG | 0.438505 | 6_1:-10375082 | Msa0874570:CDS |
| CAAACACAAACTGGTAGAAC+TGG | 0.449515 | 6_1:-10375124 | Msa0874570:CDS |
| CAAGTACGATAGCCTTGAAC+TGG | 0.453081 | 6_1:+10375070 | None:intergenic |
| GATTTGAGTCAAACACAAAC+TGG | 0.464256 | 6_1:-10375133 | Msa0874570:CDS |
| ATGGAGGTGGACCCAACAAT+AGG | 0.474022 | 6_1:-10375033 | Msa0874570:CDS |
| TAAGTACCACACCTATTGTT+GGG | 0.495822 | 6_1:+10375022 | None:intergenic |
| GTAATTGGATCAAGAAGATA+AGG | 0.513118 | 6_1:+10375275 | None:intergenic |
| GTAAGTACCACACCTATTGT+TGG | 0.525645 | 6_1:+10375021 | None:intergenic |
| TTGCCTTCTCAAAATGGAGG+TGG | 0.550109 | 6_1:-10375046 | Msa0874570:CDS |
| GTACGATAGCCTTGAACTGG+AGG | 0.617148 | 6_1:+10375073 | None:intergenic |
| TGCTTGCCTTCTCAAAATGG+AGG | 0.620754 | 6_1:-10375049 | Msa0874570:CDS |
| ACCAAAGAAGAAAATGAACA+AGG | 0.627471 | 6_1:-10375314 | None:intergenic |
| CCAAAGAAGAAAATGAACAA+GGG | 0.643796 | 6_1:-10375313 | None:intergenic |
| GATAAAAGGTTGTACCTCAG+AGG | 0.662136 | 6_1:-10375227 | Msa0874570:CDS |
| GGTAGAACTGGTAACAACAA+TGG | 0.669601 | 6_1:-10375112 | Msa0874570:CDS |
| GGTGGACCCAACAATAGGTG+TGG | 0.689105 | 6_1:-10375028 | Msa0874570:CDS |
| GTTGATCAGACAATCCTCTG+AGG | 0.737752 | 6_1:+10375213 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTGCTTAGATGTAAT+TGG | + | chr6_1:10375050-10375069 | None:intergenic | 25.0% |
| ! | ACAACATCATTGAAGATAAA+AGG | - | chr6_1:10375066-10375085 | Msa0874570:CDS | 25.0% |
| GTAATTGGATCAAGAAGATA+AGG | + | chr6_1:10375035-10375054 | None:intergenic | 30.0% | |
| TTGTCTGATCAACAATGATT+TGG | - | chr6_1:10375104-10375123 | Msa0874570:CDS | 30.0% | |
| GATTTGAGTCAAACACAAAC+TGG | - | chr6_1:10375174-10375193 | Msa0874570:CDS | 35.0% | |
| TAAGTACCACACCTATTGTT+GGG | + | chr6_1:10375288-10375307 | None:intergenic | 35.0% | |
| GATAAAAGGTTGTACCTCAG+AGG | - | chr6_1:10375080-10375099 | Msa0874570:CDS | 40.0% | |
| ! | TCATGCAGCAAGAATGCTTT+TGG | - | chr6_1:10375152-10375171 | Msa0874570:CDS | 40.0% |
| CAAACACAAACTGGTAGAAC+TGG | - | chr6_1:10375183-10375202 | Msa0874570:CDS | 40.0% | |
| GGTAGAACTGGTAACAACAA+TGG | - | chr6_1:10375195-10375214 | Msa0874570:CDS | 40.0% | |
| ACTTGCTTGCCTTCTCAAAA+TGG | - | chr6_1:10375255-10375274 | Msa0874570:CDS | 40.0% | |
| GTAAGTACCACACCTATTGT+TGG | + | chr6_1:10375289-10375308 | None:intergenic | 40.0% | |
| GTTGATCAGACAATCCTCTG+AGG | + | chr6_1:10375097-10375116 | None:intergenic | 45.0% | |
| GTTAAGTGTCCTCCAGTTCA+AGG | - | chr6_1:10375225-10375244 | Msa0874570:CDS | 45.0% | |
| ! | CAAGTACGATAGCCTTGAAC+TGG | + | chr6_1:10375240-10375259 | None:intergenic | 45.0% |
| TGCTTGCCTTCTCAAAATGG+AGG | - | chr6_1:10375258-10375277 | Msa0874570:CDS | 45.0% | |
| TTGCCTTCTCAAAATGGAGG+TGG | - | chr6_1:10375261-10375280 | Msa0874570:CDS | 45.0% | |
| ! | GTACGATAGCCTTGAACTGG+AGG | + | chr6_1:10375237-10375256 | None:intergenic | 50.0% |
| !! | GGTCCACCTCCATTTTGAGA+AGG | + | chr6_1:10375267-10375286 | None:intergenic | 50.0% |
| ATGGAGGTGGACCCAACAAT+AGG | - | chr6_1:10375274-10375293 | Msa0874570:CDS | 50.0% | |
| GGTGGACCCAACAATAGGTG+TGG | - | chr6_1:10375279-10375298 | Msa0874570:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 10375006 | 10375323 | 10375006 | ID=Msa0874570;Name=Msa0874570 |
| chr6_1 | mRNA | 10375006 | 10375323 | 10375006 | ID=Msa0874570-mRNA-1;Parent=Msa0874570;Name=Msa0874570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|105 |
| chr6_1 | exon | 10375006 | 10375323 | 10375006 | ID=Msa0874570-mRNA-1:exon:3204;Parent=Msa0874570-mRNA-1 |
| chr6_1 | CDS | 10375006 | 10375323 | 10375006 | ID=Msa0874570-mRNA-1:cds;Parent=Msa0874570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
