AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1286510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1286510 MtrunA17_Chr8g0361821 83.976 337 11 2 1 295 1 336 0.0 557
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1286510 AT1G14300.1 66.071 336 73 1 1 295 1 336 1.12e-156 441
Msa1286510 AT1G14300.2 59.626 374 72 2 1 295 1 374 1.03e-149 424

Find 93 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGCATTTATGAGTTTC+TGG 0.147371 8_3:-34479290 None:intergenic
AATACTTGAGTACGAATTTC+TGG 0.204303 8_3:+34474872 None:intergenic
AGAGTATATAACCTTGTTTC+CGG 0.269996 8_3:+34475668 None:intergenic
TCGTTTGCTTGTTATGCTTT+TGG 0.276364 8_3:-34477854 Msa1286510:CDS
TAACCGACTTGGACTATTCT+AGG 0.276381 8_3:+34473233 None:intergenic
CGAATTTCTGGATCATTAAC+AGG 0.282853 8_3:+34474884 None:intergenic
CTTTGTGATGTTAACAAGTA+TGG 0.309114 8_3:+34476773 None:intergenic
TCATACGCTCCCATAACTTT+TGG 0.317451 8_3:+34473194 None:intergenic
TGGTAATTCCAAATTCAAAA+TGG 0.326578 8_3:+34472899 None:intergenic
TGGTACTGATTCCTTGCTTC+AGG 0.336668 8_3:-34477809 Msa1286510:intron
CTCCATTGTTGCTAAACTTA+GGG 0.337250 8_3:-34472746 Msa1286510:three_prime_UTR
TCAGCTACAGAATTTGCTTT+TGG 0.342043 8_3:-34475730 Msa1286510:CDS
TCGTATCAATCCAAACAAAA+AGG 0.344219 8_3:-34479192 Msa1286510:five_prime_UTR
CTGCAATAGGATCAAGTATA+TGG 0.344616 8_3:+34474844 None:intergenic
CATATACTTGATCCTATTGC+AGG 0.356754 8_3:-34474843 Msa1286510:intron
CTGGCCTGCATTACTTCTTC+CGG 0.363720 8_3:-34475694 Msa1286510:CDS
TGTTTCAAGAGACCCCGTTT+TGG 0.375889 8_3:+34476720 None:intergenic
AACAGTTCATTGAGAAAGAA+AGG 0.392448 8_3:-34476675 Msa1286510:CDS
TTTACATATCCTAAAAGATA+TGG 0.395342 8_3:+34472879 None:intergenic
TGAGGAAGATCCAAAAGTTA+TGG 0.397955 8_3:-34473204 Msa1286510:CDS
AGGCAGGTCGAAGAGCCTTT+TGG 0.400322 8_3:-34473268 Msa1286510:CDS
TCTCCATTGTTGCTAAACTT+AGG 0.416569 8_3:-34472747 Msa1286510:three_prime_UTR
GCTTCTACTCGACCCAAAAC+GGG 0.420535 8_3:-34476733 Msa1286510:CDS
AGCTTCTACTCGACCCAAAA+CGG 0.435211 8_3:-34476734 Msa1286510:CDS
TGATATTGCTATCAGGTCTC+TGG 0.439026 8_3:-34475786 Msa1286510:intron
GAGGAAGATCCAAAAGTTAT+GGG 0.445086 8_3:-34473203 Msa1286510:CDS
AGGAGCATTTATGAGTTTCT+GGG 0.446054 8_3:-34479289 None:intergenic
CACAAAGCAGCGGGCAGGGA+GGG 0.451872 8_3:-34476757 Msa1286510:CDS
ATCCAGTTGGTTAACGGCAG+CGG 0.462597 8_3:-34473038 Msa1286510:intron
GGTAGAGTAGTAAGAAAGAA+TGG 0.465888 8_3:-34479142 Msa1286510:exon
AACATCACAAAGCAGCGGGC+AGG 0.468910 8_3:-34476762 Msa1286510:CDS
CCTCATCTTCGTAACCGACT+TGG 0.469208 8_3:+34473222 None:intergenic
ATAACCTTGTTTCCGGCTAC+CGG 0.474442 8_3:+34475675 None:intergenic
AGAAATTCGTACTCAAGTAT+TGG 0.479399 8_3:-34474870 Msa1286510:CDS
GCATTACTTCTTCCGGTAGC+CGG 0.480550 8_3:-34475687 Msa1286510:CDS
GTTGGTTAACGGCAGCGGTA+TGG 0.481170 8_3:-34473033 Msa1286510:CDS
TTCGAATCTTGCGGAGGAGA+TGG 0.490479 8_3:-34477938 Msa1286510:CDS
TAAGAACTCTAGTGTTGTAA+AGG 0.492901 8_3:-34472941 Msa1286510:three_prime_UTR
AGGCCCATTTACAGACCAAA+AGG 0.505026 8_3:+34473253 None:intergenic
TTTACTTGTTGCTACCAAGA+TGG 0.505688 8_3:+34479222 None:intergenic
ACAGTTCATTGAGAAAGAAA+GGG 0.506298 8_3:-34476674 Msa1286510:CDS
GTATGAGCAACTAGGATCCT+TGG 0.516650 8_3:-34473177 Msa1286510:intron
CATCGGAAAGACGGTGGGTG+AGG 0.523091 8_3:+34472717 None:intergenic
TCAAAATGGAAAATTTGACT+TGG 0.527523 8_3:+34472913 None:intergenic
AGGCTTCTGTAAAACAGTTA+CGG 0.528203 8_3:-34479172 Msa1286510:five_prime_UTR
TACTCTGTCGTCTCAGTGGA+TGG 0.536104 8_3:+34473005 None:intergenic
CTTATCTTCTCCATCACCAC+AGG 0.538535 8_3:-34479091 Msa1286510:intron
TAAACTTTACCAACATCAAG+AGG 0.546750 8_3:+34472796 None:intergenic
CCATTGTTGCTAAACTTAGG+GGG 0.555757 8_3:-34472744 Msa1286510:three_prime_UTR
TGATTGATTACCTGTGGTGA+TGG 0.557068 8_3:+34479081 None:intergenic
AATCTCACTCAACTTGATGC+TGG 0.559771 8_3:-34477829 Msa1286510:CDS
TTCGCAAAATTCGAATCTTG+CGG 0.563174 8_3:-34477947 Msa1286510:CDS
TCCATTGTTGCTAAACTTAG+GGG 0.569008 8_3:-34472745 Msa1286510:three_prime_UTR
CTGTAAAACAGTTACGGCGA+GGG 0.571111 8_3:-34479166 Msa1286510:five_prime_UTR
TTGTAGAACCACTCATGAGA+AGG 0.573389 8_3:-34477219 Msa1286510:CDS
GTTGTTTCAGGAAGTTTCTG+AGG 0.579566 8_3:-34477995 Msa1286510:intron
TAGAGAAATCATCGGAAAGA+CGG 0.580327 8_3:+34472708 None:intergenic
GTAGTAAGAAAGAATGGCGA+CGG 0.584809 8_3:-34479136 Msa1286510:exon
GCTACCGGAAGAAGTAATGC+AGG 0.587612 8_3:+34475690 None:intergenic
ACATCACAAAGCAGCGGGCA+GGG 0.590651 8_3:-34476761 Msa1286510:CDS
TGTTAACATCACAAAGCAGC+GGG 0.593385 8_3:-34476766 Msa1286510:CDS
TATATGTTATGAAGCTTGTG+AGG 0.597267 8_3:-34477247 Msa1286510:CDS
GGAGCATTTATGAGTTTCTG+GGG 0.599168 8_3:-34479288 Msa1286510:five_prime_UTR
TCTTCCGGTAGCCGGAAACA+AGG 0.599532 8_3:-34475679 Msa1286510:intron
TACGCAGATCTATAGTGAGG+AGG 0.602991 8_3:-34474960 Msa1286510:intron
ATTGATGATGAGAAGGTGCA+TGG 0.603125 8_3:-34477272 Msa1286510:CDS
AGTGCAGTCCCAAGTTCAAG+TGG 0.605991 8_3:+34474923 None:intergenic
CATTGTTGCTAAACTTAGGG+GGG 0.606113 8_3:-34472743 Msa1286510:three_prime_UTR
ACAAAAGCACACCTGAAGCA+AGG 0.614328 8_3:+34477798 None:intergenic
TCACAAAGCAGCGGGCAGGG+AGG 0.618149 8_3:-34476758 Msa1286510:CDS
GGTTAACGGCAGCGGTATGG+AGG 0.622742 8_3:-34473030 Msa1286510:CDS
AGAAATCATCGGAAAGACGG+TGG 0.625575 8_3:+34472711 None:intergenic
ATGGGAGCGTATGAGCAACT+AGG 0.626313 8_3:-34473185 Msa1286510:CDS
TAAAACAGTTACGGCGAGGG+AGG 0.626581 8_3:-34479163 Msa1286510:five_prime_UTR
TATACACACCACAGAGTGAG+TGG 0.637556 8_3:-34472824 Msa1286510:three_prime_UTR
CCAAGTCGGTTACGAAGATG+AGG 0.637576 8_3:-34473222 Msa1286510:CDS
TAACTACTCTGTCGTCTCAG+TGG 0.638294 8_3:+34473001 None:intergenic
GAAATCATCGGAAAGACGGT+GGG 0.639159 8_3:+34472712 None:intergenic
ACAGGCAATAGAGAAATCAT+CGG 0.639823 8_3:+34472700 None:intergenic
TTGTCAGATTGATGATGAGA+AGG 0.644227 8_3:-34477279 Msa1286510:intron
GCAAAATTCGAATCTTGCGG+AGG 0.645849 8_3:-34477944 Msa1286510:CDS
CAGTTCATTGAGAAAGAAAG+GGG 0.648372 8_3:-34476673 Msa1286510:intron
GAGACTTGTTGAAACAACAA+TGG 0.650027 8_3:-34477908 Msa1286510:CDS
AAACGAGTGACACAACACTC+AGG 0.651559 8_3:+34477871 None:intergenic
AGAACCACTCATGAGAAGGA+TGG 0.652593 8_3:-34477215 Msa1286510:intron
AGGATTTGCCACTCACTCTG+TGG 0.654456 8_3:+34472816 None:intergenic
GTGGCAAATCCTCTTGATGT+TGG 0.656085 8_3:-34472805 Msa1286510:three_prime_UTR
CATACCATCCTTCTCATGAG+TGG 0.657544 8_3:+34477211 None:intergenic
GAGCATTTATGAGTTTCTGG+GGG 0.658951 8_3:-34479287 Msa1286510:five_prime_UTR
TCTGTAAAACAGTTACGGCG+AGG 0.681886 8_3:-34479167 Msa1286510:five_prime_UTR
TTGTTAACATCACAAAGCAG+CGG 0.687062 8_3:-34476767 Msa1286510:CDS
GGGCCTAGAATAGTCCAAGT+CGG 0.690047 8_3:-34473236 Msa1286510:CDS
CTTCTACTCGACCCAAAACG+GGG 0.692630 8_3:-34476732 Msa1286510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATAAAATTAAATTAA+AGG + chr8_3:34473676-34473695 None:intergenic 0.0%
!! GTAATTATAATTACATATAA+CGG - chr8_3:34474313-34474332 Msa1286510:intron 10.0%
!! GTAACATTAAAAAAAAAAAA+GGG - chr8_3:34474341-34474360 Msa1286510:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr8_3:34478292-34478311 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr8_3:34478293-34478312 None:intergenic 10.0%
!! AATTAAATTAAAGGTCTATT+TGG + chr8_3:34473667-34473686 None:intergenic 15.0%
!! AAATTAAGAGTAAAATTAGA+AGG - chr8_3:34473881-34473900 Msa1286510:intron 15.0%
!! AAATTAGAAGGAAAAAAAAA+AGG - chr8_3:34473893-34473912 Msa1286510:intron 15.0%
!! AAAAAGGATATACAAAAATA+TGG - chr8_3:34473909-34473928 Msa1286510:intron 15.0%
!!! TATGGTATCATTTTTTTTTA+TGG - chr8_3:34473927-34473946 Msa1286510:intron 15.0%
!!! ATGGTATCATTTTTTTTTAT+GGG - chr8_3:34473928-34473947 Msa1286510:intron 15.0%
!! GGTAACATTAAAAAAAAAAA+AGG - chr8_3:34474340-34474359 Msa1286510:intron 15.0%
!! TTAAAAAAAAAAAAGGGATT+TGG - chr8_3:34474347-34474366 Msa1286510:intron 15.0%
!! GTTAATGTTAAAAATTGTAT+GGG - chr8_3:34476119-34476138 Msa1286510:intron 15.0%
!! AATGAAGGATTTATTATTAT+TGG - chr8_3:34476579-34476598 Msa1286510:intron 15.0%
!! AATTAGAGTTATATTGTATT+GGG + chr8_3:34478227-34478246 None:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + chr8_3:34478228-34478247 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr8_3:34478291-34478310 None:intergenic 15.0%
!!! TAATTATACAAATTTAGAGT+GGG + chr8_3:34478515-34478534 None:intergenic 15.0%
!! ATAATTATACAAATTTAGAG+TGG + chr8_3:34478516-34478535 None:intergenic 15.0%
!!! ATAATTATTTTAAGATGTTC+TGG - chr8_3:34478528-34478547 Msa1286510:intron 15.0%
!!! TGTTGATAAAATAAAATATC+TGG + chr8_3:34478843-34478862 None:intergenic 15.0%
!! AATTGAAGTGGAATTAAAAA+AGG + chr8_3:34472944-34472963 None:intergenic 20.0%
!!! TAAACTGTATTTTTGTTTAC+TGG - chr8_3:34472985-34473004 Msa1286510:exon 20.0%
!!! TAATTCTATAATCGTGTTTT+TGG + chr8_3:34473143-34473162 None:intergenic 20.0%
!!! GTATTGATTATTGATTGTTT+TGG - chr8_3:34473950-34473969 Msa1286510:intron 20.0%
!! TTGATGAACATATCAATTAT+TGG + chr8_3:34474494-34474513 None:intergenic 20.0%
!!! GAATTTTACAAAGTTATAGA+AGG - chr8_3:34474595-34474614 Msa1286510:intron 20.0%
!! GTTGTATTAGAGAAAAAAAA+AGG - chr8_3:34474638-34474657 Msa1286510:intron 20.0%
!! ATTAGAGAAAAAAAAAGGAT+TGG - chr8_3:34474643-34474662 Msa1286510:intron 20.0%
!! TGAACAAGGTTTAAAAAATA+AGG + chr8_3:34474887-34474906 None:intergenic 20.0%
!!! ACTTAAAATGACATATTTTC+AGG + chr8_3:34475102-34475121 None:intergenic 20.0%
!! TTTCAAATTATTAGTTGTGT+CGG + chr8_3:34475589-34475608 None:intergenic 20.0%
!!! ACAAGATATTAATCCTTTTA+GGG + chr8_3:34475789-34475808 None:intergenic 20.0%
!!! AACAAGATATTAATCCTTTT+AGG + chr8_3:34475790-34475809 None:intergenic 20.0%
!! CGTTAATGTTAAAAATTGTA+TGG - chr8_3:34476118-34476137 Msa1286510:intron 20.0%
!!! AGACAGAATTTTTAGAATAA+TGG - chr8_3:34476519-34476538 Msa1286510:intron 20.0%
!! GATTTATTATTATTGGTGTA+GGG - chr8_3:34476586-34476605 Msa1286510:intron 20.0%
!! TCTATTAGGATATAGAATAT+TGG + chr8_3:34476872-34476891 None:intergenic 20.0%
!! TTCAAACTTATAACAAAACA+AGG + chr8_3:34476922-34476941 None:intergenic 20.0%
!!! AAATTGTTTTTTTTGTCCTT+TGG - chr8_3:34477278-34477297 Msa1286510:intron 20.0%
!! TATACTAAACTTATGAAGTA+GGG + chr8_3:34477335-34477354 None:intergenic 20.0%
!! TTATACTAAACTTATGAAGT+AGG + chr8_3:34477336-34477355 None:intergenic 20.0%
!! CAAAAATCATGTGTATAAAA+TGG - chr8_3:34477426-34477445 Msa1286510:intron 20.0%
!!! ATATTTCATTAATTTTAGCG+GGG + chr8_3:34477535-34477554 None:intergenic 20.0%
!!! CATATTTCATTAATTTTAGC+GGG + chr8_3:34477536-34477555 None:intergenic 20.0%
!!! CCATATTTCATTAATTTTAG+CGG + chr8_3:34477537-34477556 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr8_3:34478195-34478214 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr8_3:34478268-34478287 None:intergenic 20.0%
!! TATAAAAGCAACATAAAGAT+GGG + chr8_3:34478894-34478913 None:intergenic 20.0%
!! TTATAAAAGCAACATAAAGA+TGG + chr8_3:34478895-34478914 None:intergenic 20.0%
!!! CAAATTTTCCATTTTGAATT+TGG - chr8_3:34479081-34479100 Msa1286510:intron 20.0%
!! TTTACATATCCTAAAAGATA+TGG + chr8_3:34479112-34479131 None:intergenic 20.0%
! TATGAGCAATTGAACATATA+GGG - chr8_3:34472726-34472745 Msa1286510:three_prime_UTR 25.0%
! TCAATCAAAAAGCTTGATTT+CGG - chr8_3:34473084-34473103 Msa1286510:intron 25.0%
!! TAAACTTTTGTGAGATTGTT+TGG - chr8_3:34473349-34473368 Msa1286510:intron 25.0%
!! ATTAAGTTGTTTATCCAAAG+AGG - chr8_3:34473777-34473796 Msa1286510:intron 25.0%
! AGTTTAGTGCTTTAGTTATT+TGG - chr8_3:34473820-34473839 Msa1286510:intron 25.0%
! TTCAATTGGGAAAAACAAAA+TGG - chr8_3:34474254-34474273 Msa1286510:intron 25.0%
! TCAATTGGGAAAAACAAAAT+GGG - chr8_3:34474255-34474274 Msa1286510:intron 25.0%
! ATAATTACATATAACGGTCA+TGG - chr8_3:34474319-34474338 Msa1286510:intron 25.0%
! TACTACTTACTTCATTATAC+TGG + chr8_3:34474395-34474414 None:intergenic 25.0%
! GTAGTATCAATATGAATGAA+TGG - chr8_3:34474409-34474428 Msa1286510:intron 25.0%
! AATTAGTTACATGAGTTCAT+CGG + chr8_3:34474805-34474824 None:intergenic 25.0%
!! AATTATGAACACTTTTCTCT+AGG - chr8_3:34474958-34474977 Msa1286510:intron 25.0%
! AATATTAATCCTCAAGTAAC+AGG + chr8_3:34475000-34475019 None:intergenic 25.0%
! TTGTAGAGAAACATATAACT+TGG - chr8_3:34475049-34475068 Msa1286510:intron 25.0%
! TGTAGAGAAACATATAACTT+GGG - chr8_3:34475050-34475069 Msa1286510:intron 25.0%
!! TTCAAACATTTTTCCATACT+AGG + chr8_3:34475379-34475398 None:intergenic 25.0%
! GAATAGTTTACTTTGAATTC+TGG - chr8_3:34475396-34475415 Msa1286510:intron 25.0%
! AATAAATCATCTATGAAGCA+CGG + chr8_3:34475709-34475728 None:intergenic 25.0%
!! CAAGATATTAATCCTTTTAG+GGG + chr8_3:34475788-34475807 None:intergenic 25.0%
! TAATCCTTGTTACTAATGAT+AGG + chr8_3:34475894-34475913 None:intergenic 25.0%
! TATAATGTGCAACTAATACA+TGG - chr8_3:34475927-34475946 Msa1286510:intron 25.0%
! ACATTCAGATATTATTACCA+AGG - chr8_3:34476067-34476086 Msa1286510:intron 25.0%
! CATTCAGATATTATTACCAA+GGG - chr8_3:34476068-34476087 Msa1286510:intron 25.0%
! TGATCCAAGCTATTAAAAAT+TGG + chr8_3:34476161-34476180 None:intergenic 25.0%
! GGATTTATTATTATTGGTGT+AGG - chr8_3:34476585-34476604 Msa1286510:intron 25.0%
!!! TGTAAGTTGATAAGTTTGTT+AGG + chr8_3:34476813-34476832 None:intergenic 25.0%
! AATTAGAGTAGTTAAGAAGT+TGG + chr8_3:34476847-34476866 None:intergenic 25.0%
!! TTTTCAAATTTACCTGCAAT+AGG + chr8_3:34477160-34477179 None:intergenic 25.0%
! TATTGCAGGTAAATTTGAAA+AGG - chr8_3:34477159-34477178 Msa1286510:intron 25.0%
! ATACTAAACTTATGAAGTAG+GGG + chr8_3:34477334-34477353 None:intergenic 25.0%
! GTTAACTGCATTACAATATT+TGG + chr8_3:34477401-34477420 None:intergenic 25.0%
! CCGCTAAAATTAATGAAATA+TGG - chr8_3:34477534-34477553 Msa1286510:intron 25.0%
!!! TTTTTAAGCCCAAAATGTAA+TGG - chr8_3:34477572-34477591 Msa1286510:intron 25.0%
!! TCATTCATCCATTACATTTT+GGG + chr8_3:34477583-34477602 None:intergenic 25.0%
!!! TGTTTATGCTTTGAGAATAT+GGG + chr8_3:34477679-34477698 None:intergenic 25.0%
!!! TTGTTTATGCTTTGAGAATA+TGG + chr8_3:34477680-34477699 None:intergenic 25.0%
! TCAAAATTACTAAAAGGTGA+AGG + chr8_3:34477879-34477898 None:intergenic 25.0%
! TGAAGCTCAAAATTACTAAA+AGG + chr8_3:34477885-34477904 None:intergenic 25.0%
! CACAATATAATAACACAACT+CGG + chr8_3:34477959-34477978 None:intergenic 25.0%
! ATGTATATTTACTATGCACA+TGG - chr8_3:34478072-34478091 Msa1286510:intron 25.0%
!!! CATGGTAAATTGTTTTGATA+TGG - chr8_3:34478090-34478109 Msa1286510:intron 25.0%
!!! GGACACTTTTTTTAGAAAAT+GGG + chr8_3:34478159-34478178 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr8_3:34478269-34478288 None:intergenic 25.0%
! GTTACAAATTTACAAGTCTA+TGG - chr8_3:34478374-34478393 Msa1286510:intron 25.0%
! GTTTAAATTTCAATTGCCAA+GGG + chr8_3:34478464-34478483 None:intergenic 25.0%
!! TTCTGGAAATATGCTATATT+TGG - chr8_3:34478545-34478564 Msa1286510:intron 25.0%
! AAAATATCTGGTATTTACCA+AGG + chr8_3:34478831-34478850 None:intergenic 25.0%
! ATAAAAGCAACATAAAGATG+GGG + chr8_3:34478893-34478912 None:intergenic 25.0%
!!! CTCTATTTTTTTTATCCAGT+TGG - chr8_3:34478937-34478956 Msa1286510:intron 25.0%
!!! TTTTTTATCCAGTTGGTTAA+CGG - chr8_3:34478944-34478963 Msa1286510:intron 25.0%
! TCAAAATGGAAAATTTGACT+TGG + chr8_3:34479078-34479097 None:intergenic 25.0%
! TGGTAATTCCAAATTCAAAA+TGG + chr8_3:34479092-34479111 None:intergenic 25.0%
!! TTGGAATTACCATATCTTTT+AGG - chr8_3:34479100-34479119 Msa1286510:CDS 25.0%
CTATATGTTCAATTGCTCAT+AGG + chr8_3:34472727-34472746 None:intergenic 30.0%
CTATGAGCAATTGAACATAT+AGG - chr8_3:34472725-34472744 Msa1286510:three_prime_UTR 30.0%
! TTGGTAGCAACAAGTAAAAA+CGG - chr8_3:34472771-34472790 Msa1286510:three_prime_UTR 30.0%
TCGTATCAATCCAAACAAAA+AGG - chr8_3:34472796-34472815 Msa1286510:three_prime_UTR 30.0%
! TTTACAGAAGCCTTTTTGTT+TGG + chr8_3:34472809-34472828 None:intergenic 30.0%
! TTAGTTTGATTGATTACCTG+TGG + chr8_3:34472916-34472935 None:intergenic 30.0%
CAGTTTAAAAACAACTGTGA+AGG + chr8_3:34472972-34472991 None:intergenic 30.0%
!! GCTTTTTGATTGATTAGCTA+GGG + chr8_3:34473077-34473096 None:intergenic 30.0%
!! AGCTTTTTGATTGATTAGCT+AGG + chr8_3:34473078-34473097 None:intergenic 30.0%
!! GACAGTGTTTTTAAAGATGT+AGG + chr8_3:34473257-34473276 None:intergenic 30.0%
ACAGATAAGCTCAAATAAGT+CGG + chr8_3:34473324-34473343 None:intergenic 30.0%
TGTTTCATGAGTTATCTTAG+AGG + chr8_3:34473436-34473455 None:intergenic 30.0%
AGCTTATACGAGAACAATTT+AGG - chr8_3:34473462-34473481 Msa1286510:intron 30.0%
GCTTATACGAGAACAATTTA+GGG - chr8_3:34473463-34473482 Msa1286510:intron 30.0%
AAAAATATGCCAAACCAAAC+AGG + chr8_3:34473489-34473508 None:intergenic 30.0%
GTTATTTGGTTGAGTATAGA+TGG - chr8_3:34473834-34473853 Msa1286510:intron 30.0%
! GTTTTTCCCAATTGAATTGA+AGG + chr8_3:34474250-34474269 None:intergenic 30.0%
! AAACAAAATGGGTGAAGTTT+TGG - chr8_3:34474266-34474285 Msa1286510:intron 30.0%
TGAATGAATGGACAAATCAA+CGG - chr8_3:34474421-34474440 Msa1286510:intron 30.0%
AAATGAGTAATTCGGTTCAA+AGG + chr8_3:34474540-34474559 None:intergenic 30.0%
! AACCGAATTACTCATTTTAG+AGG - chr8_3:34474543-34474562 Msa1286510:intron 30.0%
!! CTCCTCTAAAATGAGTAATT+CGG + chr8_3:34474548-34474567 None:intergenic 30.0%
AAAGTTATAGAAGGTAGACA+GGG - chr8_3:34474604-34474623 Msa1286510:intron 30.0%
! GTCAATTAACCATTCTCTTT+TGG - chr8_3:34474686-34474705 Msa1286510:intron 30.0%
TATATGTTATGAAGCTTGTG+AGG - chr8_3:34474741-34474760 Msa1286510:intron 30.0%
ATTAGTTACATGAGTTCATC+GGG + chr8_3:34474804-34474823 None:intergenic 30.0%
! TAGACATTAGTCTATGAACA+AGG + chr8_3:34474901-34474920 None:intergenic 30.0%
!! AACAATTTGTTGAATCAGCA+CGG + chr8_3:34475162-34475181 None:intergenic 30.0%
ACATGTTCAAAAGAATCATC+TGG + chr8_3:34475190-34475209 None:intergenic 30.0%
! GATGATTCTTTTGAACATGT+CGG - chr8_3:34475190-34475209 Msa1286510:intron 30.0%
CTTTGTGATGTTAACAAGTA+TGG + chr8_3:34475218-34475237 None:intergenic 30.0%
AACAGTTCATTGAGAAAGAA+AGG - chr8_3:34475313-34475332 Msa1286510:intron 30.0%
ACAGTTCATTGAGAAAGAAA+GGG - chr8_3:34475314-34475333 Msa1286510:intron 30.0%
!! TGTGGCTTTATGTTAATTAC+TGG - chr8_3:34476011-34476030 Msa1286510:intron 30.0%
AAAATCAATGCTATAGTACG+AGG + chr8_3:34476040-34476059 None:intergenic 30.0%
! TTTTGGTATCTGAATTTCTC+TGG - chr8_3:34476275-34476294 Msa1286510:intron 30.0%
! AGAGTATATAACCTTGTTTC+CGG + chr8_3:34476323-34476342 None:intergenic 30.0%
CATTAATCGTTTGCATATTG+AGG - chr8_3:34476362-34476381 Msa1286510:intron 30.0%
ACTTAAATATCATTCAGGCA+CGG + chr8_3:34476404-34476423 None:intergenic 30.0%
TGAGCACTTAAATATCATTC+AGG + chr8_3:34476409-34476428 None:intergenic 30.0%
ATAGACATAAAGCAAACTAC+AGG + chr8_3:34476467-34476486 None:intergenic 30.0%
! TGTCTATCTGTGATTTTCTT+AGG - chr8_3:34476480-34476499 Msa1286510:intron 30.0%
TGAAGATTGCAAACAAATGA+AGG - chr8_3:34476564-34476583 Msa1286510:intron 30.0%
ATTGAAAGAGTCGATACAAA+AGG - chr8_3:34476611-34476630 Msa1286510:intron 30.0%
TAAATAGTCCTCAATTGGTA+GGG + chr8_3:34476747-34476766 None:intergenic 30.0%
TTAAATAGTCCTCAATTGGT+AGG + chr8_3:34476748-34476767 None:intergenic 30.0%
GTCTTTAAATAGTCCTCAAT+TGG + chr8_3:34476752-34476771 None:intergenic 30.0%
!!! GTTGTTAACGGTTGTTATTT+TGG + chr8_3:34476788-34476807 None:intergenic 30.0%
!! AAGTTGATAAGTTTGTTAGG+TGG + chr8_3:34476810-34476829 None:intergenic 30.0%
! AAAAAAATGCCACTTGAACT+TGG - chr8_3:34477056-34477075 Msa1286510:intron 30.0%
! AAAAAATGCCACTTGAACTT+GGG - chr8_3:34477057-34477076 Msa1286510:intron 30.0%
AATACTTGAGTACGAATTTC+TGG + chr8_3:34477119-34477138 None:intergenic 30.0%
AGAAATTCGTACTCAAGTAT+TGG - chr8_3:34477118-34477137 Msa1286510:intron 30.0%
! ATGTTCTAGCTAATATCCAA+AGG + chr8_3:34477297-34477316 None:intergenic 30.0%
AAGGACAATTAAATGAGTCT+CGG - chr8_3:34477499-34477518 Msa1286510:intron 30.0%
GCTTAAAAACAATTGATGCT+AGG + chr8_3:34477561-34477580 None:intergenic 30.0%
! GTCATTCATCCATTACATTT+TGG + chr8_3:34477584-34477603 None:intergenic 30.0%
!! AATGTAATGGATGAATGACA+AGG - chr8_3:34477585-34477604 Msa1286510:intron 30.0%
! GTATCTTTGTTCATGTTTTC+TGG + chr8_3:34477712-34477731 None:intergenic 30.0%
GGTTAATTGCATACTTGAAA+TGG + chr8_3:34477734-34477753 None:intergenic 30.0%
! TTCAGTTTATAGAGTTGGTT+GGG + chr8_3:34477822-34477841 None:intergenic 30.0%
! TTTCAGTTTATAGAGTTGGT+TGG + chr8_3:34477823-34477842 None:intergenic 30.0%
AATTACTAAAAGGTGAAGGA+TGG + chr8_3:34477875-34477894 None:intergenic 30.0%
TTTGTCTATCGATGTTGAAA+TGG - chr8_3:34477916-34477935 Msa1286510:CDS 30.0%
!!! GGGACACTTTTTTTAGAAAA+TGG + chr8_3:34478160-34478179 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr8_3:34478284-34478303 None:intergenic 30.0%
ATAGTTCAATAACCTTGTGT+TGG - chr8_3:34478421-34478440 Msa1286510:intron 30.0%
!!! AATGGTTACTTTTTTTCCCT+TGG - chr8_3:34478445-34478464 Msa1286510:intron 30.0%
GGTTTAAATTTCAATTGCCA+AGG + chr8_3:34478465-34478484 None:intergenic 30.0%
TTGAAATTTAAACCTCAGTC+TGG - chr8_3:34478471-34478490 Msa1286510:intron 30.0%
ATAAATTTGATGCATCGAGA+AGG + chr8_3:34478674-34478693 None:intergenic 30.0%
TAAAAGCAACATAAAGATGG+GGG + chr8_3:34478892-34478911 None:intergenic 30.0%
TAAGAACTCTAGTGTTGTAA+AGG - chr8_3:34479047-34479066 Msa1286510:intron 30.0%
TAAACTTTACCAACATCAAG+AGG + chr8_3:34479195-34479214 None:intergenic 30.0%
! TTTGAGCAACTTTTCCATCT+TGG - chr8_3:34472752-34472771 Msa1286510:three_prime_UTR 35.0%
! TTTACTTGTTGCTACCAAGA+TGG + chr8_3:34472769-34472788 None:intergenic 35.0%
AGGCTTCTGTAAAACAGTTA+CGG - chr8_3:34472816-34472835 Msa1286510:three_prime_UTR 35.0%
GGTAGAGTAGTAAGAAAGAA+TGG - chr8_3:34472846-34472865 Msa1286510:three_prime_UTR 35.0%
! GTGAAGGTGTAAAATTGAAG+TGG + chr8_3:34472956-34472975 None:intergenic 35.0%
!!! ATCGTGTTTTTGGTTACCTT+GGG + chr8_3:34473133-34473152 None:intergenic 35.0%
!!! AATCGTGTTTTTGGTTACCT+TGG + chr8_3:34473134-34473153 None:intergenic 35.0%
GAAGTTGTGTTTACGAGTAT+TGG + chr8_3:34473199-34473218 None:intergenic 35.0%
TACTCGTAAACACAACTTCA+CGG - chr8_3:34473200-34473219 Msa1286510:CDS 35.0%
! GGAGAAAGAGCATACAAAAA+GGG - chr8_3:34473221-34473240 Msa1286510:CDS 35.0%
! GAGAAAGAGCATACAAAAAG+GGG - chr8_3:34473222-34473241 Msa1286510:CDS 35.0%
CAGATAAGCTCAAATAAGTC+GGG + chr8_3:34473323-34473342 None:intergenic 35.0%
! CGTATGACATGTTGATAAGT+TGG - chr8_3:34473390-34473409 Msa1286510:intron 35.0%
AACTTAGCCAAAGTGCATAT+AGG + chr8_3:34473804-34473823 None:intergenic 35.0%
!!! TGTTTTGGAGTTGATGATGA+TGG - chr8_3:34473965-34473984 Msa1286510:intron 35.0%
!!! GTTTTGGAGTTGATGATGAT+GGG - chr8_3:34473966-34473985 Msa1286510:intron 35.0%
!!! TTTTGGAGTTGATGATGATG+GGG - chr8_3:34473967-34473986 Msa1286510:intron 35.0%
! CAAGATTCGAATTTTGCGAA+AGG + chr8_3:34474041-34474060 None:intergenic 35.0%
TTCGCAAAATTCGAATCTTG+CGG - chr8_3:34474041-34474060 Msa1286510:intron 35.0%
!! GAGACTTGTTGAAACAACAA+TGG - chr8_3:34474080-34474099 Msa1286510:intron 35.0%
!!! TCGTTTGCTTGTTATGCTTT+TGG - chr8_3:34474134-34474153 Msa1286510:intron 35.0%
ACCGTTCCTTCAATTCAATT+GGG - chr8_3:34474241-34474260 Msa1286510:intron 35.0%
TCCCAATTGAATTGAAGGAA+CGG + chr8_3:34474245-34474264 None:intergenic 35.0%
GAATGAATGGACAAATCAAC+GGG - chr8_3:34474422-34474441 Msa1286510:intron 35.0%
CAAAGTTATAGAAGGTAGAC+AGG - chr8_3:34474603-34474622 Msa1286510:intron 35.0%
ATCTGACAACCAAAAGAGAA+TGG + chr8_3:34474698-34474717 None:intergenic 35.0%
!! TTGTCAGATTGATGATGAGA+AGG - chr8_3:34474709-34474728 Msa1286510:intron 35.0%
! AGACTAATGTCTACTGATTG+TGG - chr8_3:34474908-34474927 Msa1286510:CDS 35.0%
TTGTTAACATCACAAAGCAG+CGG - chr8_3:34475221-34475240 Msa1286510:intron 35.0%
CAGTTCATTGAGAAAGAAAG+GGG - chr8_3:34475315-34475334 Msa1286510:intron 35.0%
TTGCTTTCAGTTTCCTAGTA+TGG - chr8_3:34475363-34475382 Msa1286510:intron 35.0%
GTTTACTTTGAATTCTGGTG+TGG - chr8_3:34475401-34475420 Msa1286510:intron 35.0%
!! ACAACTAGCTTTGAAAGAAG+TGG - chr8_3:34475461-34475480 Msa1286510:intron 35.0%
AAAGGGGTGACAATATAGTA+GGG + chr8_3:34475864-34475883 None:intergenic 35.0%
AAAAGGGGTGACAATATAGT+AGG + chr8_3:34475865-34475884 None:intergenic 35.0%
TAATGATAGGTGGCAGAAAA+GGG + chr8_3:34475881-34475900 None:intergenic 35.0%
TCCTTGTTACTAATGATAGG+TGG + chr8_3:34475891-34475910 None:intergenic 35.0%
CCATCAAGTTTAAATTCACC+AGG + chr8_3:34475979-34475998 None:intergenic 35.0%
CCTGGTGAATTTAAACTTGA+TGG - chr8_3:34475976-34475995 Msa1286510:intron 35.0%
! ATTGTATGGGCTAAACTTAC+TGG - chr8_3:34476132-34476151 Msa1286510:intron 35.0%
! TTGTATGGGCTAAACTTACT+GGG - chr8_3:34476133-34476152 Msa1286510:intron 35.0%
! GGGACCAATTTTTAATAGCT+TGG - chr8_3:34476154-34476173 Msa1286510:intron 35.0%
ACTGTTGTGATATTGCTATC+AGG - chr8_3:34476195-34476214 Msa1286510:intron 35.0%
!! TCAGCTACAGAATTTGCTTT+TGG - chr8_3:34476258-34476277 Msa1286510:intron 35.0%
TGCAAACGATTAATGCTTTG+AGG + chr8_3:34476357-34476376 None:intergenic 35.0%
AAACTACAGGCATTAACAAG+TGG + chr8_3:34476454-34476473 None:intergenic 35.0%
ATTCTGTCTTGCTCAAAGAA+AGG + chr8_3:34476508-34476527 None:intergenic 35.0%
AAATAGTCCTCAATTGGTAG+GGG + chr8_3:34476746-34476765 None:intergenic 35.0%
! GTTTGTTAGGTGGTTGTTAA+CGG + chr8_3:34476800-34476819 None:intergenic 35.0%
GACATGGGAGATAATCTATT+AGG + chr8_3:34476886-34476905 None:intergenic 35.0%
ATTATCTCCCATGTCCATTT+GGG - chr8_3:34476891-34476910 Msa1286510:intron 35.0%
AAAACAAGGACAAACCCAAA+TGG + chr8_3:34476908-34476927 None:intergenic 35.0%
AGTGACATGAAACATGAAAC+AGG + chr8_3:34476988-34477007 None:intergenic 35.0%
! TTTTACGCAGATCTATAGTG+AGG - chr8_3:34477025-34477044 Msa1286510:intron 35.0%
! CGAATTTCTGGATCATTAAC+AGG + chr8_3:34477107-34477126 None:intergenic 35.0%
CTGCAATAGGATCAAGTATA+TGG + chr8_3:34477147-34477166 None:intergenic 35.0%
CATATACTTGATCCTATTGC+AGG - chr8_3:34477145-34477164 Msa1286510:intron 35.0%
!! TTATGCTTTGAGAATATGGG+TGG + chr8_3:34477676-34477695 None:intergenic 35.0%
GAGCTTTCAGTTTATAGAGT+TGG + chr8_3:34477827-34477846 None:intergenic 35.0%
TAAACAACCGATAAACTAGG+CGG + chr8_3:34477988-34478007 None:intergenic 35.0%
CTGTAAACAACCGATAAACT+AGG + chr8_3:34477991-34478010 None:intergenic 35.0%
AGAAAATGGGTCAGATATTC+CGG + chr8_3:34478146-34478165 None:intergenic 35.0%
!! TGAAATGGCTCAGTTGTTTT+GGG + chr8_3:34478180-34478199 None:intergenic 35.0%
! TTGAAATGGCTCAGTTGTTT+TGG + chr8_3:34478181-34478200 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG - chr8_3:34478313-34478332 Msa1286510:intron 35.0%
CAATAACCTTGTGTTGGAAA+TGG - chr8_3:34478427-34478446 Msa1286510:intron 35.0%
AAGTAACCATTTCCAACACA+AGG + chr8_3:34478436-34478455 None:intergenic 35.0%
TTTAATACGCATCGCTCTAT+TGG - chr8_3:34478575-34478594 Msa1286510:intron 35.0%
!! TATTGGCTTGAGATTGGATT+AGG - chr8_3:34478592-34478611 Msa1286510:intron 35.0%
TGAGGAAGATCCAAAAGTTA+TGG - chr8_3:34478784-34478803 Msa1286510:intron 35.0%
GAGGAAGATCCAAAAGTTAT+GGG - chr8_3:34478785-34478804 Msa1286510:intron 35.0%
TCTCCATTGTTGCTAAACTT+AGG - chr8_3:34479241-34479260 Msa1286510:five_prime_UTR 35.0%
CTCCATTGTTGCTAAACTTA+GGG - chr8_3:34479242-34479261 Msa1286510:five_prime_UTR 35.0%
TCCATTGTTGCTAAACTTAG+GGG - chr8_3:34479243-34479262 Msa1286510:five_prime_UTR 35.0%
TAGAGAAATCATCGGAAAGA+CGG + chr8_3:34479283-34479302 None:intergenic 35.0%
GTAGTAAGAAAGAATGGCGA+CGG - chr8_3:34472852-34472871 Msa1286510:three_prime_UTR 40.0%
TGATTGATTACCTGTGGTGA+TGG + chr8_3:34472910-34472929 None:intergenic 40.0%
TTTACTGGTACAGATCACGA+AGG - chr8_3:34473000-34473019 Msa1286510:exon 40.0%
TAATCCGCGAACTATGTCAA+CGG + chr8_3:34473029-34473048 None:intergenic 40.0%
!! ATTGGTTCTGCCATCCAAAA+AGG + chr8_3:34473181-34473200 None:intergenic 40.0%
! CGGAGAAAGAGCATACAAAA+AGG - chr8_3:34473220-34473239 Msa1286510:CDS 40.0%
AACAGTACTATGAGTCTGCA+TGG - chr8_3:34473297-34473316 Msa1286510:intron 40.0%
! AGAACAATTTAGGGCCTGTT+TGG - chr8_3:34473472-34473491 Msa1286510:intron 40.0%
! AATTTAGGGCCTGTTTGGTT+TGG - chr8_3:34473477-34473496 Msa1286510:intron 40.0%
AAGTGCATATAGGTCCTCTT+TGG + chr8_3:34473794-34473813 None:intergenic 40.0%
AAGAGGACCTATATGCACTT+TGG - chr8_3:34473794-34473813 Msa1286510:intron 40.0%
! GTTGTTTCAGGAAGTTTCTG+AGG - chr8_3:34473993-34474012 Msa1286510:intron 40.0%
AATCTCACTCAACTTGATGC+TGG - chr8_3:34474159-34474178 Msa1286510:intron 40.0%
GACCGTTCCTTCAATTCAAT+TGG - chr8_3:34474240-34474259 Msa1286510:intron 40.0%
GGTTAATTGACAGCAAGCAA+GGG + chr8_3:34474677-34474696 None:intergenic 40.0%
TGGTTAATTGACAGCAAGCA+AGG + chr8_3:34474678-34474697 None:intergenic 40.0%
!! ATTGATGATGAGAAGGTGCA+TGG - chr8_3:34474716-34474735 Msa1286510:intron 40.0%
TTGTAGAACCACTCATGAGA+AGG - chr8_3:34474769-34474788 Msa1286510:intron 40.0%
TGTTAACATCACAAAGCAGC+GGG - chr8_3:34475222-34475241 Msa1286510:intron 40.0%
CTAGGAAACTGAAAGCAATG+AGG + chr8_3:34475361-34475380 None:intergenic 40.0%
! ACACTGACAATCTGAAGTGT+CGG + chr8_3:34475512-34475531 None:intergenic 40.0%
TAGCTCACAAGTGTTAGTGT+CGG + chr8_3:34475545-34475564 None:intergenic 40.0%
CACTTGTGAGCTATAAAGCA+CGG - chr8_3:34475552-34475571 Msa1286510:intron 40.0%
!! TACAAGTGTCGATGTTGTGT+CGG - chr8_3:34475631-34475650 Msa1286510:intron 40.0%
TTCTCAGATTTCCTTGCTCA+TGG - chr8_3:34475732-34475751 Msa1286510:CDS 40.0%
CTTGGCTAAGTCAAACATTG+TGG - chr8_3:34475762-34475781 Msa1286510:CDS 40.0%
AATGATAGGTGGCAGAAAAG+GGG + chr8_3:34475880-34475899 None:intergenic 40.0%
CTAATGATAGGTGGCAGAAA+AGG + chr8_3:34475882-34475901 None:intergenic 40.0%
GCCACCTATCATTAGTAACA+AGG - chr8_3:34475887-34475906 Msa1286510:intron 40.0%
CTTGAGTCTTGACTCTTGTT+TGG - chr8_3:34475951-34475970 Msa1286510:intron 40.0%
!! TGATGGATTTGCTTGAGTTG+TGG - chr8_3:34475993-34476012 Msa1286510:intron 40.0%
! TGTATGGGCTAAACTTACTG+GGG - chr8_3:34476134-34476153 Msa1286510:intron 40.0%
TGATATTGCTATCAGGTCTC+TGG - chr8_3:34476202-34476221 Msa1286510:intron 40.0%
AGGCATTAACAAGTGGAAAG+TGG + chr8_3:34476447-34476466 None:intergenic 40.0%
AGATGATAACCTTGCACACA+AGG - chr8_3:34476644-34476663 Msa1286510:intron 40.0%
TATCTTTCCCCTACCAATTG+AGG - chr8_3:34476736-34476755 Msa1286510:CDS 40.0%
GATTATCTCCCATGTCCATT+TGG - chr8_3:34476890-34476909 Msa1286510:intron 40.0%
TTTGAGAATATGGGTGGAGT+CGG + chr8_3:34477670-34477689 None:intergenic 40.0%
ATCCAGTTCATCAGTCTGTT+GGG + chr8_3:34477755-34477774 None:intergenic 40.0%
TATCCAGTTCATCAGTCTGT+TGG + chr8_3:34477756-34477775 None:intergenic 40.0%
ACTAAAAGGTGAAGGATGGT+GGG + chr8_3:34477871-34477890 None:intergenic 40.0%
TACTAAAAGGTGAAGGATGG+TGG + chr8_3:34477872-34477891 None:intergenic 40.0%
AAACAACCGATAAACTAGGC+GGG + chr8_3:34477987-34478006 None:intergenic 40.0%
GAAAATGGGTCAGATATTCC+GGG + chr8_3:34478145-34478164 None:intergenic 40.0%
CATTTAATCAAGCCAGACTG+AGG + chr8_3:34478486-34478505 None:intergenic 40.0%
! CTCAGTCTGGCTTGATTAAA+TGG - chr8_3:34478484-34478503 Msa1286510:intron 40.0%
! AGAGCCTTTTGGTCTGTAAA+TGG - chr8_3:34478731-34478750 Msa1286510:intron 40.0%
! GAGCCTTTTGGTCTGTAAAT+GGG - chr8_3:34478732-34478751 Msa1286510:intron 40.0%
!! TAACCGACTTGGACTATTCT+AGG + chr8_3:34478758-34478777 None:intergenic 40.0%
! TCATACGCTCCCATAACTTT+TGG + chr8_3:34478797-34478816 None:intergenic 40.0%
CCATTGTTGCTAAACTTAGG+GGG - chr8_3:34479244-34479263 Msa1286510:five_prime_UTR 40.0%
CATTGTTGCTAAACTTAGGG+GGG - chr8_3:34479245-34479264 Msa1286510:intron 40.0%
TCTGTAAAACAGTTACGGCG+AGG - chr8_3:34472821-34472840 Msa1286510:three_prime_UTR 45.0%
CTGTAAAACAGTTACGGCGA+GGG - chr8_3:34472822-34472841 Msa1286510:three_prime_UTR 45.0%
CTTATCTTCTCCATCACCAC+AGG - chr8_3:34472897-34472916 Msa1286510:three_prime_UTR 45.0%
! GACATAGTTCGCGGATTAAC+CGG - chr8_3:34473031-34473050 Msa1286510:CDS 45.0%
TAGAATTACACTGCGCCACT+AGG - chr8_3:34473155-34473174 Msa1286510:intron 45.0%
GCAAAATTCGAATCTTGCGG+AGG - chr8_3:34474044-34474063 Msa1286510:intron 45.0%
AAACGAGTGACACAACACTC+AGG + chr8_3:34474120-34474139 None:intergenic 45.0%
!! TGGTACTGATTCCTTGCTTC+AGG - chr8_3:34474179-34474198 Msa1286510:intron 45.0%
! ACAAAAGCACACCTGAAGCA+AGG + chr8_3:34474193-34474212 None:intergenic 45.0%
!!! GGGATTTGGCTCTTTTGAAC+TGG - chr8_3:34474361-34474380 Msa1286510:intron 45.0%
AGAACCACTCATGAGAAGGA+TGG - chr8_3:34474773-34474792 Msa1286510:intron 45.0%
CATACCATCCTTCTCATGAG+TGG + chr8_3:34474780-34474799 None:intergenic 45.0%
AACATACCACGAGATCCAAC+AGG + chr8_3:34474934-34474953 None:intergenic 45.0%
AGCTTCTACTCGACCCAAAA+CGG - chr8_3:34475254-34475273 Msa1286510:intron 45.0%
! GTTTCAAGAGACCCCGTTTT+GGG + chr8_3:34475270-34475289 None:intergenic 45.0%
! TGTTTCAAGAGACCCCGTTT+TGG + chr8_3:34475271-34475290 None:intergenic 45.0%
CAAACATTGTGGCCCCTAAA+AGG - chr8_3:34475773-34475792 Msa1286510:CDS 45.0%
! CTTGACTCTTGTTTGGTTCC+TGG - chr8_3:34475958-34475977 Msa1286510:intron 45.0%
! ATAACCTTGTTTCCGGCTAC+CGG + chr8_3:34476316-34476335 None:intergenic 45.0%
GGACAAACCCAAATGGACAT+GGG + chr8_3:34476901-34476920 None:intergenic 45.0%
AGGACAAACCCAAATGGACA+TGG + chr8_3:34476902-34476921 None:intergenic 45.0%
TACGCAGATCTATAGTGAGG+AGG - chr8_3:34477028-34477047 Msa1286510:intron 45.0%
TCTCCTAGAATCAGAGCACA+AGG - chr8_3:34477480-34477499 Msa1286510:intron 45.0%
TGTCCTTGTGCTCTGATTCT+AGG + chr8_3:34477486-34477505 None:intergenic 45.0%
GGCTTATGTTTCGTGCACTT+TGG + chr8_3:34477613-34477632 None:intergenic 45.0%
AAACATAAGCCTCAGCTGTG+AGG - chr8_3:34477622-34477641 Msa1286510:intron 45.0%
AACCCAACAGACTGATGAAC+TGG - chr8_3:34477750-34477769 Msa1286510:intron 45.0%
ATTGTTCACCTCGTTGGATC+TGG + chr8_3:34477799-34477818 None:intergenic 45.0%
AACAACCGATAAACTAGGCG+GGG + chr8_3:34477986-34478005 None:intergenic 45.0%
! CCAAACTGGCTCAGATATAC+CGG - chr8_3:34478327-34478346 Msa1286510:intron 45.0%
! CAAACTGGCTCAGATATACC+GGG - chr8_3:34478328-34478347 Msa1286510:intron 45.0%
!! TCGCTCTATTGGCTTGAGAT+TGG - chr8_3:34478586-34478605 Msa1286510:intron 45.0%
GCTTTCTGTAAATTGCGTGC+TGG - chr8_3:34478642-34478661 Msa1286510:intron 45.0%
AGGCCCATTTACAGACCAAA+AGG + chr8_3:34478738-34478757 None:intergenic 45.0%
GTATGAGCAACTAGGATCCT+TGG - chr8_3:34478811-34478830 Msa1286510:intron 45.0%
CAACATAAAGATGGGGGTTG+TGG + chr8_3:34478886-34478905 None:intergenic 45.0%
TAACTACTCTGTCGTCTCAG+TGG + chr8_3:34478990-34479009 None:intergenic 45.0%
TATACACACCACAGAGTGAG+TGG - chr8_3:34479164-34479183 Msa1286510:five_prime_UTR 45.0%
GTGGCAAATCCTCTTGATGT+TGG - chr8_3:34479183-34479202 Msa1286510:five_prime_UTR 45.0%
CCCCCTAAGTTTAGCAACAA+TGG + chr8_3:34479247-34479266 None:intergenic 45.0%
GAAATCATCGGAAAGACGGT+GGG + chr8_3:34479279-34479298 None:intergenic 45.0%
AGAAATCATCGGAAAGACGG+TGG + chr8_3:34479280-34479299 None:intergenic 45.0%
TAAAACAGTTACGGCGAGGG+AGG - chr8_3:34472825-34472844 Msa1286510:three_prime_UTR 50.0%
ATGTATGCCTTCCTCAGAGC+CGG + chr8_3:34473053-34473072 None:intergenic 50.0%
TGCCATCCAAAAAGGCCTAG+TGG + chr8_3:34473173-34473192 None:intergenic 50.0%
!! ATGATGGGGCGTGTTGTTTC+AGG - chr8_3:34473981-34474000 Msa1286510:intron 50.0%
TTCGAATCTTGCGGAGGAGA+TGG - chr8_3:34474050-34474069 Msa1286510:intron 50.0%
! GTCTACTGATTGTGGCCTGT+TGG - chr8_3:34474916-34474935 Msa1286510:CDS 50.0%
TAACAGGTGCCTCATCTGCT+CGG + chr8_3:34474984-34475003 None:intergenic 50.0%
! GATGAGGCACCTGTTACTTG+AGG - chr8_3:34474988-34475007 Msa1286510:intron 50.0%
GCTTCTACTCGACCCAAAAC+GGG - chr8_3:34475255-34475274 Msa1286510:intron 50.0%
CTTCTACTCGACCCAAAACG+GGG - chr8_3:34475256-34475275 Msa1286510:intron 50.0%
! TGTCGATGTTGTGTCGGTGT+TGG - chr8_3:34475637-34475656 Msa1286510:intron 50.0%
TGCTCAGATTAGGCGTGTTC+CGG + chr8_3:34475682-34475701 None:intergenic 50.0%
CAAGCATCAGACCATGAGCA+AGG + chr8_3:34475746-34475765 None:intergenic 50.0%
CTTGCTCATGGTCTGATGCT+TGG - chr8_3:34475744-34475763 Msa1286510:CDS 50.0%
ACCAAGGGCTAAGCTTACAG+TGG - chr8_3:34476083-34476102 Msa1286510:intron 50.0%
ACCACTGTAAGCTTAGCCCT+TGG + chr8_3:34476087-34476106 None:intergenic 50.0%
CTGGCCTGCATTACTTCTTC+CGG - chr8_3:34476294-34476313 Msa1286510:intron 50.0%
GCTACCGGAAGAAGTAATGC+AGG + chr8_3:34476301-34476320 None:intergenic 50.0%
GCATTACTTCTTCCGGTAGC+CGG - chr8_3:34476301-34476320 Msa1286510:intron 50.0%
!! TGAAAGGAGGGTGCTCCTTT+GGG + chr8_3:34476674-34476693 None:intergenic 50.0%
AGTGCAGTCCCAAGTTCAAG+TGG + chr8_3:34477068-34477087 None:intergenic 50.0%
GTTGGGATTGTTCACCTCGT+TGG + chr8_3:34477805-34477824 None:intergenic 50.0%
GAGTTCCCCGCCTAGTTTAT+CGG - chr8_3:34477978-34477997 Msa1286510:CDS 50.0%
ATGGGTCAGATATTCCGGGA+CGG + chr8_3:34478141-34478160 None:intergenic 50.0%
CCGGTATATCTGAGCCAGTT+TGG + chr8_3:34478330-34478349 None:intergenic 50.0%
!! GTGAGCTGCCATTGTTTTGC+AGG - chr8_3:34478697-34478716 Msa1286510:intron 50.0%
!! AGCTGCCATTGTTTTGCAGG+AGG - chr8_3:34478700-34478719 Msa1286510:intron 50.0%
ACCTGCCTCCTGCAAAACAA+TGG + chr8_3:34478708-34478727 None:intergenic 50.0%
GGGCCTAGAATAGTCCAAGT+CGG - chr8_3:34478752-34478771 Msa1286510:intron 50.0%
CCTCATCTTCGTAACCGACT+TGG + chr8_3:34478769-34478788 None:intergenic 50.0%
CCAAGTCGGTTACGAAGATG+AGG - chr8_3:34478766-34478785 Msa1286510:intron 50.0%
! ATGGGAGCGTATGAGCAACT+AGG - chr8_3:34478803-34478822 Msa1286510:intron 50.0%
CATAAAGATGGGGGTTGTGG+AGG + chr8_3:34478883-34478902 None:intergenic 50.0%
ATCCAGTTGGTTAACGGCAG+CGG - chr8_3:34478950-34478969 Msa1286510:intron 50.0%
TACTCTGTCGTCTCAGTGGA+TGG + chr8_3:34478986-34479005 None:intergenic 50.0%
AGGATTTGCCACTCACTCTG+TGG + chr8_3:34479175-34479194 None:intergenic 50.0%
GCTGCCGTTGACATAGTTCG+CGG - chr8_3:34473022-34473041 Msa1286510:CDS 55.0%
!! GGATTAACCGGCTCTGAGGA+AGG - chr8_3:34473043-34473062 Msa1286510:intron 55.0%
CTTGGGCGCAGTTAAGAGAC+GGG + chr8_3:34473116-34473135 None:intergenic 55.0%
CCTTGGGCGCAGTTAAGAGA+CGG + chr8_3:34473117-34473136 None:intergenic 55.0%
! ACTGCGCCACTAGGCCTTTT+TGG - chr8_3:34473164-34473183 Msa1286510:intron 55.0%
! CGCCACTAGGCCTTTTTGGA+TGG - chr8_3:34473168-34473187 Msa1286510:intron 55.0%
TTGTGGCCTGTTGGATCTCG+TGG - chr8_3:34474925-34474944 Msa1286510:CDS 55.0%
TTCTCTAGGCCGAGCAGATG+AGG - chr8_3:34474972-34474991 Msa1286510:intron 55.0%
AACATCACAAAGCAGCGGGC+AGG - chr8_3:34475226-34475245 Msa1286510:intron 55.0%
ACATCACAAAGCAGCGGGCA+GGG - chr8_3:34475227-34475246 Msa1286510:intron 55.0%
GATTAGGCGTGTTCCGGTGT+CGG + chr8_3:34475676-34475695 None:intergenic 55.0%
GCACGGACACTGCTCAGATT+AGG + chr8_3:34475692-34475711 None:intergenic 55.0%
TCTTCCGGTAGCCGGAAACA+AGG - chr8_3:34476309-34476328 Msa1286510:intron 55.0%
!! TTGGGGTAGCCTTGTGTGCA+AGG + chr8_3:34476656-34476675 None:intergenic 55.0%
TGCACACAAGGCTACCCCAA+AGG - chr8_3:34476656-34476675 Msa1286510:intron 55.0%
!! GAAAGGAGGGTGCTCCTTTG+GGG + chr8_3:34476673-34476692 None:intergenic 55.0%
!! GTGAAAGGAGGGTGCTCCTT+TGG + chr8_3:34476675-34476694 None:intergenic 55.0%
GATGCTCAACCTCACAGCTG+AGG + chr8_3:34477634-34477653 None:intergenic 55.0%
GCTGTGAGGTTGAGCATCAC+AGG - chr8_3:34477636-34477655 Msa1286510:intron 55.0%
CGCTGAATCCAGATCCAACG+AGG - chr8_3:34477788-34477807 Msa1286510:intron 55.0%
GGGACTGGATTCAGCTGGTA+GGG + chr8_3:34477851-34477870 None:intergenic 55.0%
TGGGACTGGATTCAGCTGGT+AGG + chr8_3:34477852-34477871 None:intergenic 55.0%
! ATGGTGGGACTGGATTCAGC+TGG + chr8_3:34477856-34477875 None:intergenic 55.0%
!! AAGGTGAAGGATGGTGGGAC+TGG + chr8_3:34477866-34477885 None:intergenic 55.0%
ATCTTGTACTCCCTCCGTCC+CGG - chr8_3:34478124-34478143 Msa1286510:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG + chr8_3:34478137-34478156 None:intergenic 55.0%
CTGGCTCAGATATACCGGGA+CGG - chr8_3:34478332-34478351 Msa1286510:intron 55.0%
CTCAGATATACCGGGACGGA+GGG - chr8_3:34478336-34478355 Msa1286510:intron 55.0%
!! GCCATTGTTTTGCAGGAGGC+AGG - chr8_3:34478704-34478723 Msa1286510:intron 55.0%
! AGGCAGGTCGAAGAGCCTTT+TGG - chr8_3:34478720-34478739 Msa1286510:intron 55.0%
AAAGATGGGGGTTGTGGAGG+AGG + chr8_3:34478880-34478899 None:intergenic 55.0%
TACCGCTGCCGTTAACCAAC+TGG + chr8_3:34478955-34478974 None:intergenic 55.0%
GTTGGTTAACGGCAGCGGTA+TGG - chr8_3:34478955-34478974 Msa1286510:intron 55.0%
! TCGCGGATTAACCGGCTCTG+AGG - chr8_3:34473039-34473058 Msa1286510:intron 60.0%
CCGTCTCTTAACTGCGCCCA+AGG - chr8_3:34473114-34473133 Msa1286510:intron 60.0%
ACGTGTGTCGTGTCCGACAC+CGG - chr8_3:34475660-34475679 Msa1286510:intron 60.0%
GGTCAGATATTCCGGGACGG+AGG + chr8_3:34478138-34478157 None:intergenic 60.0%
GCTCAGATATACCGGGACGG+AGG - chr8_3:34478335-34478354 Msa1286510:intron 60.0%
GGTTAACGGCAGCGGTATGG+AGG - chr8_3:34478958-34478977 Msa1286510:intron 60.0%
CATCGGAAAGACGGTGGGTG+AGG + chr8_3:34479274-34479293 None:intergenic 60.0%
TCACAAAGCAGCGGGCAGGG+AGG - chr8_3:34475230-34475249 Msa1286510:intron 65.0%
CACAAAGCAGCGGGCAGGGA+GGG - chr8_3:34475231-34475250 Msa1286510:intron 65.0%
CCGTGATACTCCCTCCGTCC+CGG + chr8_3:34478349-34478368 None:intergenic 65.0%
!! CCGGGACGGAGGGAGTATCA+CGG - chr8_3:34478346-34478365 Msa1286510:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 34472703 34479307 34472703 ID=Msa1286510;Name=Msa1286510
chr8_3 mRNA 34472703 34479307 34472703 ID=Msa1286510-mRNA-1;Parent=Msa1286510;Name=Msa1286510-mRNA-1;_AED=0.18;_eAED=0.18;_QI=142|0.87|1|1|0.87|0.77|9|301|295
chr8_3 exon 34472703 34473054 34472703 ID=Msa1286510-mRNA-1:exon:10310;Parent=Msa1286510-mRNA-1
chr8_3 exon 34473178 34473291 34473178 ID=Msa1286510-mRNA-1:exon:10309;Parent=Msa1286510-mRNA-1
chr8_3 exon 34474844 34474975 34474844 ID=Msa1286510-mRNA-1:exon:10308;Parent=Msa1286510-mRNA-1
chr8_3 exon 34475680 34475793 34475680 ID=Msa1286510-mRNA-1:exon:10307;Parent=Msa1286510-mRNA-1
chr8_3 exon 34476674 34476819 34476674 ID=Msa1286510-mRNA-1:exon:10306;Parent=Msa1286510-mRNA-1
chr8_3 exon 34477216 34477294 34477216 ID=Msa1286510-mRNA-1:exon:10305;Parent=Msa1286510-mRNA-1
chr8_3 exon 34477810 34478007 34477810 ID=Msa1286510-mRNA-1:exon:10304;Parent=Msa1286510-mRNA-1
chr8_3 exon 34479092 34479263 34479092 ID=Msa1286510-mRNA-1:exon:10303;Parent=Msa1286510-mRNA-1
chr8_3 exon 34479284 34479307 34479284 ID=Msa1286510-mRNA-1:exon:10302;Parent=Msa1286510-mRNA-1
chr8_3 five_prime_UTR 34479284 34479307 34479284 ID=Msa1286510-mRNA-1:five_prime_utr;Parent=Msa1286510-mRNA-1
chr8_3 five_prime_UTR 34479146 34479263 34479146 ID=Msa1286510-mRNA-1:five_prime_utr;Parent=Msa1286510-mRNA-1
chr8_3 CDS 34479092 34479145 34479092 ID=Msa1286510-mRNA-1:cds;Parent=Msa1286510-mRNA-1
chr8_3 CDS 34477810 34478007 34477810 ID=Msa1286510-mRNA-1:cds;Parent=Msa1286510-mRNA-1
chr8_3 CDS 34477216 34477294 34477216 ID=Msa1286510-mRNA-1:cds;Parent=Msa1286510-mRNA-1
chr8_3 CDS 34476674 34476819 34476674 ID=Msa1286510-mRNA-1:cds;Parent=Msa1286510-mRNA-1
chr8_3 CDS 34475680 34475793 34475680 ID=Msa1286510-mRNA-1:cds;Parent=Msa1286510-mRNA-1
chr8_3 CDS 34474844 34474975 34474844 ID=Msa1286510-mRNA-1:cds;Parent=Msa1286510-mRNA-1
chr8_3 CDS 34473178 34473291 34473178 ID=Msa1286510-mRNA-1:cds;Parent=Msa1286510-mRNA-1
chr8_3 CDS 34473004 34473054 34473004 ID=Msa1286510-mRNA-1:cds;Parent=Msa1286510-mRNA-1
chr8_3 three_prime_UTR 34472703 34473003 34472703 ID=Msa1286510-mRNA-1:three_prime_utr;Parent=Msa1286510-mRNA-1
Gene Sequence

>Msa1286510

ATGGCGACGGAGCTTGAAGAACTAGTGAGCTTCTTATCTTCTCCATCACCACAGGAAGTTTCTGAGGCTGCTGCTGAAGCTCTTGTGAACCTTTCGCAAAATTCGAATCTTGCGGAGGAGATGGTTCAGATGAGACTTGTTGAAACAACAATGGATGTTTTGTATAAGCCTGAGTGTTGTGTCACTCGTTTGCTTGTTATGCTTTTGGTTAATCTCACTCAACTTGATGCTGGTACTGATTCCTTGCTTCAGATTGATGATGAGAAGGTGCATGGATTATATGTTATGAAGCTTGTGAGGTCATTTTGTAGAACCACTCATGAGAAGGATGATGATTCTTTTGAACATGTCGGTTCCATACTTGTTAACATCACAAAGCAGCGGGCAGGGAGGGAGCTTCTACTCGACCCAAAACGGGGTCTCTTGAAACAGATAATTAGACAGTTCGATTCAAACAGTTCATTGAGAAAGAAAGGGGTCTCTGGAACTATTCGCAACTGTTGTTTTGAAGCTGAGAATCAGCTACAGAATTTGCTTTTGGTATCTGAATTTCTCTGGCCTGCATTACTTCTTCCGGTAGCCGGAAACAAGATCTATAGTGAGGAGGACAGAAAAAAAATGCCACTTGAACTTGGGACTGCACTATCGATCGAACGTGAACCTGTTAATGATCCAGAAATTCGTACTCAAGTATTGGAAGCCATATACTTGATCCTATTGCAGGAGGCAGGTCGAAGAGCCTTTTGGTCTGTAAATGGGCCTAGAATAGTCCAAGTCGGTTACGAAGATGAGGAAGATCCAAAAGTTATGGGAGCGTATGAGCAACTAGGATCCTTGTTGGTTAACGGCAGCGGTATGGAGGAACCATCCACTGAGACGACAGAGTAG

Protein sequence

>Msa1286510

MATELEELVSFLSSPSPQEVSEAAAEALVNLSQNSNLAEEMVQMRLVETTMDVLYKPECCVTRLLVMLLVNLTQLDAGTDSLLQIDDEKVHGLYVMKLVRSFCRTTHEKDDDSFEHVGSILVNITKQRAGRELLLDPKRGLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYSEEDRKKMPLELGTALSIEREPVNDPEIRTQVLEAIYLILLQEAGRRAFWSVNGPRIVQVGYEDEEDPKVMGAYEQLGSLLVNGSGMEEPSTETTE*