AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0573380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573380 MtrunA17_Chr8g0389161 98.398 437 7 0 1 437 1 437 0.0 894
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573380 AT3G10700.1 64.815 432 141 2 6 437 3 423 0.0 548
Msa0573380 AT3G10700.3 63.812 362 120 2 76 437 5 355 3.07e-154 441
Msa0573380 AT3G10700.2 64.907 322 102 2 6 327 3 313 8.39e-138 398

Find 116 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATTGAGAATGAATATT+TGG 0.148149 4_1:+76575863 Msa0573380:CDS
CTTGCAATTGAAACCGATTT+TGG 0.168222 4_1:+76572298 Msa0573380:five_prime_UTR
CCCTATCGAATTTGTCCTTT+GGG 0.178205 4_1:+76572986 Msa0573380:CDS
AAAATGTTGCTGGCTCTTTC+TGG 0.184400 4_1:+76577326 Msa0573380:CDS
ACGGGAAGTTTAGAAGATTT+TGG 0.201422 4_1:+76579294 Msa0573380:CDS
TTGAGAGCTCCTGGTGTATT+GGG 0.238575 4_1:+76580653 Msa0573380:CDS
GAAATAATGCTCTGCTCTTT+TGG 0.241028 4_1:-76579126 None:intergenic
AGCCACAGGAACAATGTAAT+TGG 0.256134 4_1:+76574131 Msa0573380:CDS
CTTCTGGGGTTTACTCCTTC+TGG 0.272838 4_1:+76573266 Msa0573380:CDS
TTTAGCTATGACAATCAATA+AGG 0.279528 4_1:+76573238 Msa0573380:CDS
GGAATTCTCATCGCTGCTTC+TGG 0.291132 4_1:+76579315 Msa0573380:CDS
ATAAAATAGCAGTTGGTAAA+TGG 0.297429 4_1:-76572332 None:intergenic
GGGGCACGTTTCAGTGGTGC+TGG 0.313834 4_1:+76580674 Msa0573380:CDS
ATTGAGAGCTCCTGGTGTAT+TGG 0.326421 4_1:+76580652 Msa0573380:CDS
AATCAATAAGGGAATACTTC+TGG 0.338568 4_1:+76573250 Msa0573380:CDS
TTCAAGGAGAAGTGAAGTTC+AGG 0.341185 4_1:+76573605 Msa0573380:CDS
CTACCAACCCCGGATATAAT+AGG 0.344598 4_1:+76577366 Msa0573380:CDS
TATTGTATGCTTCGCTTGTT+TGG 0.347233 4_1:+76572390 Msa0573380:five_prime_UTR
GCCCTATCGAATTTGTCCTT+TGG 0.353442 4_1:+76572985 Msa0573380:CDS
CGGTCACCGACAACATAAAA+TGG 0.353872 4_1:+76572167 None:intergenic
TTGTAGTTTGTAATTCGTTC+AGG 0.355824 4_1:+76573577 Msa0573380:intron
CCGTATATGCACTACAGAAT+AGG 0.363557 4_1:+76574173 Msa0573380:CDS
CGTATATGCACTACAGAATA+GGG 0.363640 4_1:+76574174 Msa0573380:CDS
CAATGTTTACAGGGTATCAT+TGG 0.367185 4_1:+76575027 Msa0573380:intron
GCCACAGGAACAATGTAATT+GGG 0.370262 4_1:+76574132 Msa0573380:CDS
TTGATTGAGAATGAATATTT+GGG 0.370505 4_1:+76575864 Msa0573380:CDS
TTCAGTGGTGCTGGGTTTAG+AGG 0.370802 4_1:+76580683 Msa0573380:CDS
TCTGATGGTCTGGACAGTTC+AGG 0.372167 4_1:+76575063 Msa0573380:CDS
CCTATTCTGTAGTGCATATA+CGG 0.381651 4_1:-76574173 None:intergenic
GGAGTCGAGGCTTGGGAAAC+GGG 0.384982 4_1:+76579276 Msa0573380:intron
AATTAATTCTGCAGATCATC+TGG 0.392142 4_1:+76577835 Msa0573380:intron
TGCAACTCGCCTATTATATC+CGG 0.393949 4_1:-76577375 None:intergenic
ATCAATAAGGGAATACTTCT+GGG 0.405069 4_1:+76573251 Msa0573380:CDS
AATAAAGAAGCGCGAATCAT+TGG 0.408236 4_1:+76572266 Msa0573380:five_prime_UTR
AGTAGCATACCTCTTAGCTT+TGG 0.420578 4_1:+76575186 Msa0573380:CDS
AATATATAGTTAATGAATAT+AGG 0.424641 4_1:+76581033 Msa0573380:three_prime_UTR
GAAAGCAGCTAAAATGTTGC+TGG 0.429654 4_1:+76577316 Msa0573380:CDS
CTGAAAATATTGAATATGAT+AGG 0.435242 4_1:+76575239 Msa0573380:CDS
ATACACCAGGAGCTCTCAAT+AGG 0.436295 4_1:-76580649 None:intergenic
TTGTGAGCCTCATAAACTTC+CGG 0.440960 4_1:-76578021 None:intergenic
GGGCACGTTTCAGTGGTGCT+GGG 0.443328 4_1:+76580675 Msa0573380:CDS
TTAGCTATGACAATCAATAA+GGG 0.443756 4_1:+76573239 Msa0573380:CDS
TCTGACTAGCTAACTCGGGC+TGG 0.445555 4_1:-76580781 None:intergenic
GGTTGGTGAAGCGCCAAAAT+CGG 0.447239 4_1:-76572311 None:intergenic
TAATCCAGGAGTCGAGGCTT+GGG 0.458763 4_1:+76579269 Msa0573380:intron
TCAAATATTGACCATTTGAC+AGG 0.461903 4_1:-76577879 None:intergenic
AGGAGTCGAGGCTTGGGAAA+CGG 0.463752 4_1:+76579275 Msa0573380:intron
GAGAGAGAAAGTTTCTCAAA+TGG 0.464031 4_1:+76572925 Msa0573380:CDS
TGTACTCTTGCACCGTTGGC+CGG 0.464779 4_1:-76577277 None:intergenic
CATACGTGGTTCTGATGGTC+TGG 0.468452 4_1:+76575053 Msa0573380:CDS
AACATAAAATGGTGAGTGTT+TGG 0.470664 4_1:+76572178 Msa0573380:five_prime_UTR
CTGAAGCTGCATCATTTGTC+AGG 0.475935 4_1:+76580741 Msa0573380:CDS
TTTGTCTTAGTAGTTTGCAC+TGG 0.480855 4_1:-76574079 None:intergenic
GCAACTCGCCTATTATATCC+GGG 0.484604 4_1:-76577374 None:intergenic
AGTTGCACCGGAAGTTTATG+AGG 0.486774 4_1:+76578014 Msa0573380:intron
TCGGTTTCAATTGCAAGGTA+AGG 0.495137 4_1:-76572292 None:intergenic
TTGCATGTTCCAAAGCTAAG+AGG 0.495586 4_1:-76575195 None:intergenic
TACATACATAAAATAGCAGT+TGG 0.496820 4_1:-76572339 None:intergenic
ATTCGTTCAGGACAGTTTCA+AGG 0.498096 4_1:+76573589 Msa0573380:CDS
GCTTATCTGACTAGCTAACT+CGG 0.498921 4_1:-76580786 None:intergenic
ATTACATTGTTCCTGTGGCT+CGG 0.509440 4_1:-76574128 None:intergenic
TTAATCCAGGAGTCGAGGCT+TGG 0.509901 4_1:+76579268 Msa0573380:intron
GAGATCCTATTGAGAGCTCC+TGG 0.513071 4_1:+76580644 Msa0573380:CDS
TGAGAGCTCCTGGTGTATTG+GGG 0.515368 4_1:+76580654 Msa0573380:CDS
GCGGAGCACATCCTGTCAAA+TGG 0.519126 4_1:+76577868 Msa0573380:CDS
GTGCAAATTAGAACCCAATC+TGG 0.521888 4_1:+76579103 Msa0573380:intron
AGAGAATTCTTCCGAGCCAC+AGG 0.528821 4_1:+76574117 Msa0573380:CDS
CCTATCGAATTTGTCCTTTG+GGG 0.530180 4_1:+76572987 Msa0573380:CDS
CTATCGAATTTGTCCTTTGG+GGG 0.532892 4_1:+76572988 Msa0573380:CDS
TTGAAAGTAGTATAGCTGAT+TGG 0.535673 4_1:-76575908 None:intergenic
CAAAATCGGTTTCAATTGCA+AGG 0.537925 4_1:-76572297 None:intergenic
TCCATTCAAAATTATGAATG+TGG 0.538112 4_1:+76579345 Msa0573380:CDS
TTCTCATCGCTGCTTCTGGT+CGG 0.543594 4_1:+76579319 Msa0573380:CDS
GAGAATATGCGTGTTATGAA+AGG 0.544922 4_1:+76579152 Msa0573380:CDS
CTGACTAGCTAACTCGGGCT+GGG 0.547001 4_1:-76580780 None:intergenic
AGGATGCTGTATTGCCCTTG+TGG 0.556238 4_1:+76580703 Msa0573380:CDS
CCCCAATTACATTGTTCCTG+TGG 0.559811 4_1:-76574133 None:intergenic
AATAGCAGTTGGTAAATGGT+TGG 0.560886 4_1:-76572328 None:intergenic
GCGAGTTGCAGAGTGTAAAG+AGG 0.567225 4_1:+76577388 Msa0573380:CDS
CCCAAAGGACAAATTCGATA+GGG 0.568698 4_1:-76572986 None:intergenic
AGAAGATGGCAGGGTCGTGT+TGG 0.579641 4_1:+76572444 Msa0573380:exon
GAAAGTTTCTCAAATGGCAA+AGG 0.583814 4_1:+76572931 Msa0573380:CDS
CCACAGGAACAATGTAATTG+GGG 0.584095 4_1:+76574133 Msa0573380:CDS
GGATACATACGTGGTTCTGA+TGG 0.587638 4_1:+76575048 Msa0573380:CDS
TTCACCTCATCGCTTCCAGA+AGG 0.589446 4_1:-76573281 None:intergenic
ATCTCATACAGTTGAATCAG+TGG 0.591158 4_1:-76580626 None:intergenic
CTTATCTGACTAGCTAACTC+GGG 0.593706 4_1:-76580785 None:intergenic
TCGCCTATTATATCCGGGGT+TGG 0.597810 4_1:-76577369 None:intergenic
TAACGTACGTACCTCTGTAT+CGG 0.598872 4_1:-76572471 None:intergenic
TAGGGGACACAATATTTCAA+AGG 0.601696 4_1:+76574192 Msa0573380:CDS
TTTCTTCCAAGCAGTTGCAC+CGG 0.608122 4_1:+76578002 Msa0573380:intron
TAGCAAGGTGCTCCTCCACA+AGG 0.611891 4_1:-76580718 None:intergenic
AATGTTTAATCCAGGAGTCG+AGG 0.613521 4_1:+76579263 Msa0573380:intron
AAGAATATAAGCTTATTCAC+CGG 0.614977 4_1:+76577258 Msa0573380:CDS
CCCCAAAGGACAAATTCGAT+AGG 0.615725 4_1:-76572987 None:intergenic
GAGAGCTCCTGGTGTATTGG+GGG 0.618129 4_1:+76580655 Msa0573380:CDS
ATGATGCAGCTTCAGTAGCA+AGG 0.619433 4_1:-76580733 None:intergenic
TTTGATGTGCATGAATTGCA+AGG 0.621600 4_1:+76575941 Msa0573380:CDS
ATGCTGTATTGCCCTTGTGG+AGG 0.622412 4_1:+76580706 Msa0573380:CDS
CAGAGTGTAAAGAGGCTGCA+CGG 0.622874 4_1:+76577396 Msa0573380:CDS
TACTCCTTCTGGAAGCGATG+AGG 0.627318 4_1:+76573277 Msa0573380:CDS
ATAAAATGGTGAGTGTTTGG+TGG 0.631043 4_1:+76572181 Msa0573380:five_prime_UTR
GGAAGTTTATGAGGCTCACA+AGG 0.632515 4_1:+76578023 Msa0573380:CDS
GCTATACTACTTTCAAGACA+TGG 0.632611 4_1:+76575915 Msa0573380:CDS
GTACGTACCTCTGTATCGGA+AGG 0.632909 4_1:-76572467 None:intergenic
TCAATAAGGGAATACTTCTG+GGG 0.643607 4_1:+76573252 Msa0573380:CDS
CAACTCGCCTATTATATCCG+GGG 0.650891 4_1:-76577373 None:intergenic
TAAGCTTATTCACCGGCCAA+CGG 0.652544 4_1:+76577265 Msa0573380:CDS
ATCATCTGGAGATTATGAAG+CGG 0.659188 4_1:+76577849 Msa0573380:CDS
CAAGCTTTGACTACCAACCC+CGG 0.668548 4_1:+76577356 Msa0573380:CDS
GTGTTGGCCTTCCGATACAG+AGG 0.670297 4_1:+76572460 Msa0573380:CDS
CACAGGAACAATGTAATTGG+GGG 0.671775 4_1:+76574134 Msa0573380:CDS
AGCAAGGTGCTCCTCCACAA+GGG 0.672873 4_1:-76580717 None:intergenic
TGTCAGGAGAGAATATCTCA+AGG 0.688973 4_1:+76580757 Msa0573380:CDS
GTATATGCACTACAGAATAG+GGG 0.695498 4_1:+76574175 Msa0573380:CDS
GGTATCATTGGATACATACG+TGG 0.735502 4_1:+76575039 Msa0573380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAATAAATAAAT+AGG - chr4_1:76572613-76572632 None:intergenic 0.0%
!!! TTTTTTTATTAAGCAATATT+AGG + chr4_1:76573088-76573107 Msa0573380:intron 10.0%
!!! AAATTCTAAAATAAAACATT+AGG - chr4_1:76573663-76573682 None:intergenic 10.0%
!!! TTTTTTAACAAACTTTTATT+GGG + chr4_1:76573735-76573754 Msa0573380:intron 10.0%
!!! ATATTTGTTTGTTAAAAAAA+GGG + chr4_1:76575677-76575696 Msa0573380:intron 10.0%
!!! TTTATATTCTTTTTAATAAG+TGG + chr4_1:76576433-76576452 Msa0573380:intron 10.0%
!!! AATTGTTTTCTTATAAAAAA+AGG - chr4_1:76578208-76578227 None:intergenic 10.0%
!! AGTAGTAATTATTATTTATA+CGG - chr4_1:76578484-76578503 None:intergenic 10.0%
!! TATAAATAATAATTACTACT+CGG + chr4_1:76578484-76578503 Msa0573380:intron 10.0%
!!! ATCTATTTTATTTTCTATTT+TGG + chr4_1:76579791-76579810 Msa0573380:intron 10.0%
!!! CTTTTTTAACAAACTTTTAT+TGG + chr4_1:76573734-76573753 Msa0573380:intron 15.0%
!!! TTTTTAACAAACAAATATCA+AGG - chr4_1:76575675-76575694 None:intergenic 15.0%
!!! GATATTTGTTTGTTAAAAAA+AGG + chr4_1:76575676-76575695 Msa0573380:intron 15.0%
!!! AGTTTTTTTTTATACTGTAT+TGG - chr4_1:76576748-76576767 None:intergenic 15.0%
!!! TTTCTTAGTTCTTATATATT+TGG + chr4_1:76577116-76577135 Msa0573380:intron 15.0%
!!! TTCTTAGTTCTTATATATTT+GGG + chr4_1:76577117-76577136 Msa0573380:intron 15.0%
!! TTCTCTTGAAAAAAAATTAA+AGG - chr4_1:76577776-76577795 None:intergenic 15.0%
!! TTATAAGAAAACAATTTCAT+TGG + chr4_1:76578212-76578231 Msa0573380:intron 15.0%
!! TATAAGAAAACAATTTCATT+GGG + chr4_1:76578213-76578232 Msa0573380:intron 15.0%
!!! TTCATAAAAAATAACTCTTT+TGG + chr4_1:76578427-76578446 Msa0573380:intron 15.0%
!! ATTATTATTTATACGGAAAA+TGG - chr4_1:76578477-76578496 None:intergenic 15.0%
!! AATTATGCTAAATTCATAAA+TGG - chr4_1:76579057-76579076 None:intergenic 15.0%
!!! ATATATCAATTTAGAACTTT+GGG - chr4_1:76579384-76579403 None:intergenic 15.0%
!!! AATATATCAATTTAGAACTT+TGG - chr4_1:76579385-76579404 None:intergenic 15.0%
!! TTGAATTTATGAAATTCATT+TGG + chr4_1:76580355-76580374 Msa0573380:intron 15.0%
!!! TCCTACATTTTAATTATTTC+CGG - chr4_1:76572676-76572695 None:intergenic 20.0%
!! TAAAGAATTTGAGAATGTAT+TGG - chr4_1:76573164-76573183 None:intergenic 20.0%
!!! TGTTAACAGCATTTTATTAT+TGG - chr4_1:76573853-76573872 None:intergenic 20.0%
!! AACATTTCTCAATATTATCT+TGG + chr4_1:76573869-76573888 Msa0573380:intron 20.0%
!! ACATTTCTCAATATTATCTT+GGG + chr4_1:76573870-76573889 Msa0573380:intron 20.0%
!! ACAAAATTATGCAATGAAAA+AGG - chr4_1:76573973-76573992 None:intergenic 20.0%
!! TAAGACAAAAAATGATAACA+TGG + chr4_1:76574093-76574112 Msa0573380:CDS 20.0%
!!! TATTACAGTATTTTCAAATG+TGG + chr4_1:76574297-76574316 Msa0573380:intron 20.0%
!!! TCATTAGATCCTATTTTTAA+GGG + chr4_1:76574770-76574789 Msa0573380:intron 20.0%
!!! AAGTTTTTGTTCTTCAAATA+AGG + chr4_1:76574847-76574866 Msa0573380:intron 20.0%
!! ATGGTACTATAAAATAAACT+TGG + chr4_1:76574891-76574910 Msa0573380:intron 20.0%
!!! ATGTTTTCTGATTTTATGAT+GGG + chr4_1:76575134-76575153 Msa0573380:intron 20.0%
!! TTACAATTTCAATTTATCAC+AGG + chr4_1:76575159-76575178 Msa0573380:intron 20.0%
!!! TCATATTCAATATTTTCAGT+AGG - chr4_1:76575238-76575257 None:intergenic 20.0%
!! CTGAAAATATTGAATATGAT+AGG + chr4_1:76575239-76575258 Msa0573380:CDS 20.0%
!!! TAAAAGGATATGTTATTTGT+TGG + chr4_1:76575487-76575506 Msa0573380:intron 20.0%
!! AGTATTACATTTCTCATTAT+AGG + chr4_1:76575841-76575860 Msa0573380:intron 20.0%
!! TTGATTGAGAATGAATATTT+GGG + chr4_1:76575864-76575883 Msa0573380:CDS 20.0%
!! TATAAAATGACAGAAACAAT+AGG - chr4_1:76576073-76576092 None:intergenic 20.0%
!!! TTTCAAAGTCTTTAATTTTC+TGG + chr4_1:76576251-76576270 Msa0573380:intron 20.0%
!!! TTCAAAGTCTTTAATTTTCT+GGG + chr4_1:76576252-76576271 Msa0573380:intron 20.0%
!!! TGAATATCAGACTTATTTTA+AGG - chr4_1:76576976-76576995 None:intergenic 20.0%
!! TTTGTAGTTATACATGAAAA+CGG - chr4_1:76577191-76577210 None:intergenic 20.0%
!!! AAAAAAAATTAAAGGTGCTA+GGG - chr4_1:76577768-76577787 None:intergenic 20.0%
!!! AATTTTTTTTCAAGAGAACT+TGG + chr4_1:76577778-76577797 Msa0573380:intron 20.0%
!! TAAAAATAACATAAAACTCC+TGG - chr4_1:76577816-76577835 None:intergenic 20.0%
!! CATAAACAGTTTAAACAAAT+TGG + chr4_1:76578381-76578400 Msa0573380:intron 20.0%
!!! AAATTGAGAAAAAGTTTTGA+AGG + chr4_1:76578539-76578558 Msa0573380:intron 20.0%
!! TTAATGTAAATGTTTAATCC+AGG + chr4_1:76579255-76579274 Msa0573380:intron 20.0%
!!! TATATCAATTTAGAACTTTG+GGG - chr4_1:76579383-76579402 None:intergenic 20.0%
!!! TAATTTTTGCATAACTTTTC+AGG - chr4_1:76579542-76579561 None:intergenic 20.0%
!!! TCTTTTGCGTATAATTTTAA+TGG - chr4_1:76579580-76579599 None:intergenic 20.0%
!!! ACATTTTTAATGTGAAATGT+TGG + chr4_1:76579984-76580003 Msa0573380:intron 20.0%
!!! ATTTTTTTTCATTTTGTGTG+TGG + chr4_1:76580933-76580952 Msa0573380:three_prime_UTR 20.0%
!!! ATAAAATAGCAGTTGGTAAA+TGG - chr4_1:76572335-76572354 None:intergenic 25.0%
! TACATACATAAAATAGCAGT+TGG - chr4_1:76572342-76572361 None:intergenic 25.0%
! TCCGGAAATAATTAAAATGT+AGG + chr4_1:76572672-76572691 Msa0573380:intron 25.0%
!! TTCTAGATCTTTGAAAATTG+AGG + chr4_1:76572774-76572793 Msa0573380:intron 25.0%
! GGATAGAATGAATATTTCAA+TGG + chr4_1:76572795-76572814 Msa0573380:intron 25.0%
! AATGAATATTTCAATGGAAG+TGG + chr4_1:76572801-76572820 Msa0573380:intron 25.0%
! GTGGAAATAACTGAAAAATA+TGG + chr4_1:76572820-76572839 Msa0573380:intron 25.0%
! AAATGAAATGCTTCTAATTC+AGG - chr4_1:76572852-76572871 None:intergenic 25.0%
!! TCATCAGGTACTTTTATATA+TGG + chr4_1:76573021-76573040 Msa0573380:intron 25.0%
!! CATCAGGTACTTTTATATAT+GGG + chr4_1:76573022-76573041 Msa0573380:intron 25.0%
! TTTAGCTATGACAATCAATA+AGG + chr4_1:76573238-76573257 Msa0573380:CDS 25.0%
! TTAGCTATGACAATCAATAA+GGG + chr4_1:76573239-76573258 Msa0573380:CDS 25.0%
! CAAAAACATGAGAAAATATC+TGG + chr4_1:76573334-76573353 Msa0573380:intron 25.0%
!! CTTTTATTGGGTGAAATTTA+TGG + chr4_1:76573747-76573766 Msa0573380:intron 25.0%
! ATTATTGGATGAAAATGATG+AGG - chr4_1:76573838-76573857 None:intergenic 25.0%
!!! GGCAAATTATAGTGTTATTT+AGG - chr4_1:76574008-76574027 None:intergenic 25.0%
! ATACCAACATACTAAAAAGT+TGG + chr4_1:76574367-76574386 Msa0573380:intron 25.0%
!!! GTAAAGGAAGTTTTATGTAA+TGG + chr4_1:76574615-76574634 Msa0573380:intron 25.0%
!!! CTCATTAGATCCTATTTTTA+AGG + chr4_1:76574769-76574788 Msa0573380:intron 25.0%
! ATAACAAGACCCTTAAAAAT+AGG - chr4_1:76574782-76574801 None:intergenic 25.0%
! TCAAATAAGGTTACTAACAA+TGG + chr4_1:76574860-76574879 Msa0573380:intron 25.0%
! AAATCAGAAAACATGAGAAA+AGG - chr4_1:76575128-76575147 None:intergenic 25.0%
!! CATGTTTTCTGATTTTATGA+TGG + chr4_1:76575133-76575152 Msa0573380:intron 25.0%
!! TGTTTTCTGATTTTATGATG+GGG + chr4_1:76575135-76575154 Msa0573380:intron 25.0%
! AATTTCAATTTATCACAGGT+TGG + chr4_1:76575163-76575182 Msa0573380:intron 25.0%
! TATTTATTCTTCTTCAACCA+TGG + chr4_1:76575291-76575310 Msa0573380:intron 25.0%
! ATTTATTCTTCTTCAACCAT+GGG + chr4_1:76575292-76575311 Msa0573380:intron 25.0%
! GTATGAATCAATATAGTCAA+AGG + chr4_1:76575328-76575347 Msa0573380:intron 25.0%
! TATTTAACTCTTATCCAGAA+AGG - chr4_1:76575426-76575445 None:intergenic 25.0%
! TGAATAGTCAGAATGATAAA+AGG + chr4_1:76575471-76575490 Msa0573380:intron 25.0%
! ACAAATATCAAGGTAGTTAA+AGG - chr4_1:76575665-76575684 None:intergenic 25.0%
! TGAGAAATGTAATACTTAGA+GGG - chr4_1:76575837-76575856 None:intergenic 25.0%
! ATGAGAAATGTAATACTTAG+AGG - chr4_1:76575838-76575857 None:intergenic 25.0%
! GTTGATTGAGAATGAATATT+TGG + chr4_1:76575863-76575882 Msa0573380:CDS 25.0%
!!! TATCTTTTTCACCTTTATAG+AGG + chr4_1:76576102-76576121 Msa0573380:intron 25.0%
!! ATTTTAAACTAGATTTGCAC+CGG + chr4_1:76576175-76576194 Msa0573380:intron 25.0%
!!! GAGCAGAAATTTAAGTTTTA+TGG - chr4_1:76576326-76576345 None:intergenic 25.0%
!!! AAAAGTATTTTGTTTGCACT+TGG + chr4_1:76576488-76576507 Msa0573380:intron 25.0%
!!! AAAGTATTTTGTTTGCACTT+GGG + chr4_1:76576489-76576508 Msa0573380:intron 25.0%
! TTGGATATCTGTTGAAATTT+GGG - chr4_1:76576729-76576748 None:intergenic 25.0%
! ATTGGATATCTGTTGAAATT+TGG - chr4_1:76576730-76576749 None:intergenic 25.0%
!!! TGAATATCAGACTTGTTTTA+AGG - chr4_1:76577049-76577068 None:intergenic 25.0%
! AAGAATATAAGCTTATTCAC+CGG + chr4_1:76577258-76577277 Msa0573380:CDS 25.0%
!! AGTTTTCACAATCTGAATTT+TGG - chr4_1:76577682-76577701 None:intergenic 25.0%
!!! GAAAAAAAATTAAAGGTGCT+AGG - chr4_1:76577769-76577788 None:intergenic 25.0%
! AAATAGATAGTTCAAAAGTG+AGG - chr4_1:76577907-76577926 None:intergenic 25.0%
! TTTGTACAAGCTTAATTGAA+TGG + chr4_1:76578147-76578166 Msa0573380:intron 25.0%
! ACAATTTCATTGGGTAAATT+CGG + chr4_1:76578222-76578241 Msa0573380:intron 25.0%
! ATATCAAAATTCATCAACCA+TGG + chr4_1:76578291-76578310 Msa0573380:intron 25.0%
! ACAGTTTAAACAAATTGGTT+TGG + chr4_1:76578386-76578405 Msa0573380:intron 25.0%
!!! AAACAAATTGGTTTGGTATT+TGG + chr4_1:76578393-76578412 Msa0573380:intron 25.0%
!! TTTCTGATAGTGAAATCAAA+GGG + chr4_1:76578587-76578606 Msa0573380:intron 25.0%
!! AATGTCAACGTAACAATTTT+CGG - chr4_1:76578900-76578919 None:intergenic 25.0%
! ACTAACATGAAAAGAAACTA+TGG - chr4_1:76578948-76578967 None:intergenic 25.0%
! TGTTATGTATTACTTGTTCT+AGG + chr4_1:76578978-76578997 Msa0573380:intron 25.0%
! TCCATTCAAAATTATGAATG+TGG + chr4_1:76579345-76579364 Msa0573380:CDS 25.0%
!! ACCACATTCATAATTTTGAA+TGG - chr4_1:76579349-76579368 None:intergenic 25.0%
!! ATATCAATTTAGAACTTTGG+GGG - chr4_1:76579382-76579401 None:intergenic 25.0%
! TTGAATACATGAAACCTATA+TGG + chr4_1:76579445-76579464 Msa0573380:intron 25.0%
! TGAATACATGAAACCTATAT+GGG + chr4_1:76579446-76579465 Msa0573380:intron 25.0%
!! AAATATTTTTCCACCCATAT+AGG - chr4_1:76579462-76579481 None:intergenic 25.0%
! AATATATACGACAGTAGAAA+AGG - chr4_1:76579668-76579687 None:intergenic 25.0%
! AATCTATTATTACTGAGATC+GGG - chr4_1:76579836-76579855 None:intergenic 25.0%
! CAATCTATTATTACTGAGAT+CGG - chr4_1:76579837-76579856 None:intergenic 25.0%
! ATCTCAGTAATAATAGATTG+AGG + chr4_1:76579837-76579856 Msa0573380:intron 25.0%
! TCTCAGTAATAATAGATTGA+GGG + chr4_1:76579838-76579857 Msa0573380:intron 25.0%
! AAGTCTGAAAGCTATAAAAT+AGG - chr4_1:76580196-76580215 None:intergenic 25.0%
!! TGGAGATTTTTACATTTTCT+CGG - chr4_1:76580290-76580309 None:intergenic 25.0%
AACATAAAATGGTGAGTGTT+TGG + chr4_1:76572178-76572197 Msa0573380:five_prime_UTR 30.0%
ACAAAATTGTCTTGCATTTC+CGG + chr4_1:76572654-76572673 Msa0573380:intron 30.0%
! TTAAACTCGATGATTGACTT+TGG + chr4_1:76573060-76573079 Msa0573380:intron 30.0%
! TAAACTCGATGATTGACTTT+GGG + chr4_1:76573061-76573080 Msa0573380:intron 30.0%
AATATTAGGTATTAGAGCAC+TGG + chr4_1:76573102-76573121 Msa0573380:intron 30.0%
! ATATTAGGTATTAGAGCACT+GGG + chr4_1:76573103-76573122 Msa0573380:intron 30.0%
!! GTATTGGTTAATCAATGAAC+AGG - chr4_1:76573148-76573167 None:intergenic 30.0%
AATCAATAAGGGAATACTTC+TGG + chr4_1:76573250-76573269 Msa0573380:CDS 30.0%
ATCAATAAGGGAATACTTCT+GGG + chr4_1:76573251-76573270 Msa0573380:CDS 30.0%
CACTTATTTCACATTGTCTT+TGG + chr4_1:76573499-76573518 Msa0573380:intron 30.0%
! TTGTAGTTTGTAATTCGTTC+AGG + chr4_1:76573577-76573596 Msa0573380:intron 30.0%
GGGTTGTACAAAATAAGAAT+TGG - chr4_1:76573796-76573815 None:intergenic 30.0%
TTCAACTACCATTCTGATAA+CGG + chr4_1:76573940-76573959 Msa0573380:intron 30.0%
! AGCAAATCTTGGTAATTGTT+TGG - chr4_1:76574436-76574455 None:intergenic 30.0%
TTTCTGATTACAGCAAATCT+TGG - chr4_1:76574447-76574466 None:intergenic 30.0%
!! TACTGTTTGTGGTATTTTGA+TGG + chr4_1:76574687-76574706 Msa0573380:intron 30.0%
!!! ACTGTTTGTGGTATTTTGAT+GGG + chr4_1:76574688-76574707 Msa0573380:intron 30.0%
ACTAACAATGGCATTTGATA+TGG + chr4_1:76574872-76574891 Msa0573380:intron 30.0%
TGTAAACATTGTGACAAGTA+GGG - chr4_1:76575018-76575037 None:intergenic 30.0%
TACTTGTCACAATGTTTACA+GGG + chr4_1:76575018-76575037 Msa0573380:intron 30.0%
AGAAAACATGAGAAAAGGAA+GGG - chr4_1:76575123-76575142 None:intergenic 30.0%
AGGTAAGTTTATCCAATCTT+TGG + chr4_1:76575259-76575278 Msa0573380:intron 30.0%
ATAGTGATATCTCCAAAGAT+TGG - chr4_1:76575274-76575293 None:intergenic 30.0%
!! ATATAGTCAAAGGCATCAAA+AGG + chr4_1:76575338-76575357 Msa0573380:intron 30.0%
! ATATGTTATTTGTTGGACTC+TGG + chr4_1:76575494-76575513 Msa0573380:intron 30.0%
!! CATAAACACTGACTTAAAGA+AGG - chr4_1:76575576-76575595 None:intergenic 30.0%
TTTATGTCTCTTCTTTAGCA+AGG + chr4_1:76575590-76575609 Msa0573380:intron 30.0%
GAATATTTGGGTCTGAAAAA+TGG + chr4_1:76575876-76575895 Msa0573380:CDS 30.0%
TTGAAAGTAGTATAGCTGAT+TGG - chr4_1:76575911-76575930 None:intergenic 30.0%
AAGTATGATTAGAACTTGCA+AGG - chr4_1:76575990-76576009 None:intergenic 30.0%
TATCTGATTATGCAACTGAT+GGG - chr4_1:76576031-76576050 None:intergenic 30.0%
ACAGAAACAATAGGTAGTTT+GGG - chr4_1:76576064-76576083 None:intergenic 30.0%
TGTTTGAGAAGAATTTGGAT+GGG + chr4_1:76576146-76576165 Msa0573380:intron 30.0%
! TGTATCAAAACATTTTCCCT+GGG - chr4_1:76576219-76576238 None:intergenic 30.0%
! ATGTATCAAAACATTTTCCC+TGG - chr4_1:76576220-76576239 None:intergenic 30.0%
! AAAGACTTTGAAAAACGTAG+AGG - chr4_1:76576244-76576263 None:intergenic 30.0%
! CAGTTAATTTTCTAAATGCC+AGG + chr4_1:76576279-76576298 Msa0573380:intron 30.0%
AAATGCTACCAATACAAGTT+AGG - chr4_1:76576348-76576367 None:intergenic 30.0%
!! AAGGATGGGTTAGATATTAT+TGG + chr4_1:76576514-76576533 Msa0573380:intron 30.0%
!! TGGAAATTCCGCTTTTATTA+CGG + chr4_1:76576534-76576553 Msa0573380:intron 30.0%
CTTGTGAAGAGTTTATAAAG+AGG + chr4_1:76576657-76576676 Msa0573380:intron 30.0%
TGGATATCTGTTGAAATTTG+GGG - chr4_1:76576728-76576747 None:intergenic 30.0%
TTCATTTATAGCTCTTCACA+TGG + chr4_1:76576851-76576870 Msa0573380:intron 30.0%
ATGAGTAGGACATTAAATAG+TGG - chr4_1:76576931-76576950 None:intergenic 30.0%
AGCTAATATAGTCTGCATTA+TGG + chr4_1:76577004-76577023 Msa0573380:intron 30.0%
GCTAATATAGTCTGCATTAT+GGG + chr4_1:76577078-76577097 Msa0573380:intron 30.0%
! TCTTATATATTTGGGTTCCT+TGG + chr4_1:76577125-76577144 Msa0573380:intron 30.0%
ATGAAAACGGTTTATACATC+AGG - chr4_1:76577178-76577197 None:intergenic 30.0%
AAAACAGTAAATAAAGCGAG+AGG - chr4_1:76577454-76577473 None:intergenic 30.0%
TTACGTTCCATGTAAAATGT+TGG + chr4_1:76577511-76577530 Msa0573380:intron 30.0%
! GAAATGTCCAACATTTTACA+TGG - chr4_1:76577521-76577540 None:intergenic 30.0%
! GTAATGTTGACAGATTTTGA+TGG - chr4_1:76577579-76577598 None:intergenic 30.0%
AATTAATTCTGCAGATCATC+TGG + chr4_1:76577835-76577854 Msa0573380:intron 30.0%
TCAAATATTGACCATTTGAC+AGG - chr4_1:76577882-76577901 None:intergenic 30.0%
! AGATAGTTCAAAAGTTCTGA+TGG - chr4_1:76577944-76577963 None:intergenic 30.0%
AAGTAGAGAACAAAATTCAC+TGG + chr4_1:76578247-76578266 Msa0573380:intron 30.0%
TGGTTTACATGTCAATAGTT+CGG - chr4_1:76578457-76578476 None:intergenic 30.0%
! CTTTGATTTCACTATCAGAA+AGG - chr4_1:76578588-76578607 None:intergenic 30.0%
! CTTTCTGATAGTGAAATCAA+AGG + chr4_1:76578586-76578605 Msa0573380:intron 30.0%
ATTTGCAATTCACACTATAC+TGG + chr4_1:76578681-76578700 Msa0573380:intron 30.0%
! ATATGCTGTTTGTGCTATAA+GGG - chr4_1:76578711-76578730 None:intergenic 30.0%
! AATATGCTGTTTGTGCTATA+AGG - chr4_1:76578712-76578731 None:intergenic 30.0%
AGCATATTGAAAAACTCACA+TGG + chr4_1:76578724-76578743 Msa0573380:intron 30.0%
GCATATTGAAAAACTCACAT+GGG + chr4_1:76578725-76578744 Msa0573380:intron 30.0%
TTCCATATGCCAAAGTTTAA+CGG + chr4_1:76578833-76578852 Msa0573380:intron 30.0%
AACACTCAAATTGGCAATAT+TGG - chr4_1:76578871-76578890 None:intergenic 30.0%
! CAACTCATTTTCATCTTAGA+GGG - chr4_1:76579428-76579447 None:intergenic 30.0%
! TCAACTCATTTTCATCTTAG+AGG - chr4_1:76579429-76579448 None:intergenic 30.0%
! AAAGAAGTGCAACTAGATAT+TGG - chr4_1:76579504-76579523 None:intergenic 30.0%
! ATTATACGCAAAAGAAGTGT+TGG + chr4_1:76579585-76579604 Msa0573380:intron 30.0%
CTCAGTAATAATAGATTGAG+GGG + chr4_1:76579839-76579858 Msa0573380:intron 30.0%
! ATAATAGATTGAGGGGTTTT+CGG + chr4_1:76579846-76579865 Msa0573380:intron 30.0%
TAAAGCTTCTTAGATTTGTC+AGG + chr4_1:76579894-76579913 Msa0573380:intron 30.0%
!! ATCATGAATCGTTTTTCACA+TGG + chr4_1:76579943-76579962 Msa0573380:intron 30.0%
ATTATATCTGCCAACTCAAA+CGG - chr4_1:76580241-76580260 None:intergenic 30.0%
! ATTTTTACATTTTCTCGGAG+GGG - chr4_1:76580285-76580304 None:intergenic 30.0%
! GATTTTTACATTTTCTCGGA+GGG - chr4_1:76580286-76580305 None:intergenic 30.0%
! AGATTTTTACATTTTCTCGG+AGG - chr4_1:76580287-76580306 None:intergenic 30.0%
AACTAGACGAAATTGATACT+GGG - chr4_1:76580313-76580332 None:intergenic 30.0%
AAACTAGACGAAATTGATAC+TGG - chr4_1:76580314-76580333 None:intergenic 30.0%
! AACACTTGTCATCTGAAATT+TGG - chr4_1:76580439-76580458 None:intergenic 30.0%
CAGATGACAAGTGTTTAATT+TGG + chr4_1:76580444-76580463 Msa0573380:intron 30.0%
GTTTATGTCTTGTAAACATG+AGG - chr4_1:76580513-76580532 None:intergenic 30.0%
GTAGACATTCAAATCATCAA+AGG - chr4_1:76580551-76580570 None:intergenic 30.0%
ATGAATTTATGTGTCTACCA+AGG + chr4_1:76580596-76580615 Msa0573380:intron 30.0%
! CACTCACCATTTTATGTTGT+CGG - chr4_1:76572176-76572195 None:intergenic 35.0%
ATAAAATGGTGAGTGTTTGG+TGG + chr4_1:76572181-76572200 Msa0573380:five_prime_UTR 35.0%
! AATAAAGAAGCGCGAATCAT+TGG + chr4_1:76572266-76572285 Msa0573380:five_prime_UTR 35.0%
! CAAAATCGGTTTCAATTGCA+AGG - chr4_1:76572300-76572319 None:intergenic 35.0%
!! CTTGCAATTGAAACCGATTT+TGG + chr4_1:76572298-76572317 Msa0573380:five_prime_UTR 35.0%
!! AATAGCAGTTGGTAAATGGT+TGG - chr4_1:76572331-76572350 None:intergenic 35.0%
TATTGTATGCTTCGCTTGTT+TGG + chr4_1:76572390-76572409 Msa0573380:five_prime_UTR 35.0%
TCTTCTTCTTCTTCTTCGAT+CGG - chr4_1:76572424-76572443 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAAGA+TGG + chr4_1:76572427-76572446 Msa0573380:five_prime_UTR 35.0%
GTAGGAGTTGAATTTCCATA+CGG + chr4_1:76572690-76572709 Msa0573380:intron 35.0%
AGTTGAATTTCCATACGGAT+TGG + chr4_1:76572695-76572714 Msa0573380:intron 35.0%
ATTTCTACCATCACAAAGCA+AGG - chr4_1:76572725-76572744 None:intergenic 35.0%
GAGAGAGAAAGTTTCTCAAA+TGG + chr4_1:76572925-76572944 Msa0573380:CDS 35.0%
GAAAGTTTCTCAAATGGCAA+AGG + chr4_1:76572931-76572950 Msa0573380:CDS 35.0%
TCAATAAGGGAATACTTCTG+GGG + chr4_1:76573252-76573271 Msa0573380:CDS 35.0%
ATAACTGATAAGTGACCTGT+GGG + chr4_1:76573529-76573548 Msa0573380:intron 35.0%
AGAAAAAAAAAAGTCCCCAC+AGG - chr4_1:76573547-76573566 None:intergenic 35.0%
AATAAGAATTGGCATCCACA+TGG - chr4_1:76573785-76573804 None:intergenic 35.0%
TCAACTACCATTCTGATAAC+GGG + chr4_1:76573941-76573960 Msa0573380:intron 35.0%
CAAACACTTGACTCAACATT+GGG - chr4_1:76574029-76574048 None:intergenic 35.0%
! TTTGTCTTAGTAGTTTGCAC+TGG - chr4_1:76574082-76574101 None:intergenic 35.0%
CCTATTCTGTAGTGCATATA+CGG - chr4_1:76574176-76574195 None:intergenic 35.0%
CGTATATGCACTACAGAATA+GGG + chr4_1:76574174-76574193 Msa0573380:CDS 35.0%
GTATATGCACTACAGAATAG+GGG + chr4_1:76574175-76574194 Msa0573380:CDS 35.0%
TAGGGGACACAATATTTCAA+AGG + chr4_1:76574192-76574211 Msa0573380:CDS 35.0%
AACAGAAAGGTGAATCATTG+TGG - chr4_1:76574230-76574249 None:intergenic 35.0%
!! GCACCAACTTTTTAGTATGT+TGG - chr4_1:76574373-76574392 None:intergenic 35.0%
! CATTGATTAAGTGAGGGTAA+AGG + chr4_1:76574599-76574618 Msa0573380:intron 35.0%
! TCTAAGTTGCTTTCTGATCA+TGG + chr4_1:76574650-76574669 Msa0573380:intron 35.0%
TATGGAAGCAATACTGTTTG+TGG + chr4_1:76574676-76574695 Msa0573380:intron 35.0%
!!! CTGTTTGTGGTATTTTGATG+GGG + chr4_1:76574689-76574708 Msa0573380:intron 35.0%
!!! TTGATGGGGTGTTTTTTCAA+CGG + chr4_1:76574703-76574722 Msa0573380:intron 35.0%
GTTCGACGCTTAAAATCTAA+AGG - chr4_1:76574730-76574749 None:intergenic 35.0%
CTGTAAACATTGTGACAAGT+AGG - chr4_1:76575019-76575038 None:intergenic 35.0%
CTACTTGTCACAATGTTTAC+AGG + chr4_1:76575017-76575036 Msa0573380:intron 35.0%
! CAATGTTTACAGGGTATCAT+TGG + chr4_1:76575027-76575046 Msa0573380:intron 35.0%
GGGAGAATTTCTATTTACTG+CGG - chr4_1:76575103-76575122 None:intergenic 35.0%
CAGAAAACATGAGAAAAGGA+AGG - chr4_1:76575124-76575143 None:intergenic 35.0%
TATTCAGAAAGTTAGAGGAC+TGG - chr4_1:76575457-76575476 None:intergenic 35.0%
CTGACTATTCAGAAAGTTAG+AGG - chr4_1:76575462-76575481 None:intergenic 35.0%
!! TAAAGGCAAAAGGCATTTCA+GGG - chr4_1:76575648-76575667 None:intergenic 35.0%
!! TTAAAGGCAAAAGGCATTTC+AGG - chr4_1:76575649-76575668 None:intergenic 35.0%
TCAAGGTAGTTAAAGGCAAA+AGG - chr4_1:76575658-76575677 None:intergenic 35.0%
CATACAACTGTAAGAAGTAG+AGG - chr4_1:76575719-76575738 None:intergenic 35.0%
! GCATTAATTTCGAGCTTTGA+TGG - chr4_1:76575742-76575761 None:intergenic 35.0%
GCTATACTACTTTCAAGACA+TGG + chr4_1:76575915-76575934 Msa0573380:CDS 35.0%
TTTGATGTGCATGAATTGCA+AGG + chr4_1:76575941-76575960 Msa0573380:CDS 35.0%
GTATCTGATTATGCAACTGA+TGG - chr4_1:76576032-76576051 None:intergenic 35.0%
TAGGTAGTTTGGGAAACAAA+GGG - chr4_1:76576054-76576073 None:intergenic 35.0%
ATAGGTAGTTTGGGAAACAA+AGG - chr4_1:76576055-76576074 None:intergenic 35.0%
GACAGAAACAATAGGTAGTT+TGG - chr4_1:76576065-76576084 None:intergenic 35.0%
!! CTTTTTCACCTTTATAGAGG+AGG + chr4_1:76576105-76576124 Msa0573380:intron 35.0%
ACAGGTGTTTGAGAAGAATT+TGG + chr4_1:76576141-76576160 Msa0573380:intron 35.0%
GTGTTTGAGAAGAATTTGGA+TGG + chr4_1:76576145-76576164 Msa0573380:intron 35.0%
GGATTCAGATGAGTAATATC+CGG - chr4_1:76576197-76576216 None:intergenic 35.0%
! GTATCAAAACATTTTCCCTG+GGG - chr4_1:76576218-76576237 None:intergenic 35.0%
ATGAACAGTATAGCTATTCC+TGG - chr4_1:76576300-76576319 None:intergenic 35.0%
! TTTCTGCTCCTAACTTGTAT+TGG + chr4_1:76576337-76576356 Msa0573380:intron 35.0%
! GAGTCTTATATATCCGATGT+GGG - chr4_1:76576638-76576657 None:intergenic 35.0%
! AGAGTCTTATATATCCGATG+TGG - chr4_1:76576639-76576658 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr4_1:76576704-76576723 None:intergenic 35.0%
AGCTAGACAATGTTATGAGT+AGG - chr4_1:76576945-76576964 None:intergenic 35.0%
! ATATATTTGGGTTCCTTGGT+CGG + chr4_1:76577129-76577148 Msa0573380:intron 35.0%
TCGGATCTCTTTCTTTGAAT+TGG + chr4_1:76577148-76577167 Msa0573380:intron 35.0%
CTAAATTAAGACACGATCAG+AGG - chr4_1:76577225-76577244 None:intergenic 35.0%
!!! AGCAACATTTTAGCTGCTTT+CGG - chr4_1:76577317-76577336 None:intergenic 35.0%
!!! TCTTAAAAGCGCTACTCTTT+TGG - chr4_1:76577632-76577651 None:intergenic 35.0%
ATCATCTGGAGATTATGAAG+CGG + chr4_1:76577849-76577868 Msa0573380:CDS 35.0%
ATAGAGAGATACAGAAGTTC+TGG + chr4_1:76578327-76578346 Msa0573380:intron 35.0%
! TTCAATTAGTCTCCATTGTG+AGG - chr4_1:76578521-76578540 None:intergenic 35.0%
! AGGCTAATGAAGAGCATATA+TGG + chr4_1:76578559-76578578 Msa0573380:intron 35.0%
CTGCTTTATGTAATTCTCGT+CGG + chr4_1:76578632-76578651 Msa0573380:intron 35.0%
CATGAAAAGAAACTATGGCA+GGG - chr4_1:76578943-76578962 None:intergenic 35.0%
ACATGAAAAGAAACTATGGC+AGG - chr4_1:76578944-76578963 None:intergenic 35.0%
! GAAATAATGCTCTGCTCTTT+TGG - chr4_1:76579129-76579148 None:intergenic 35.0%
GAGAATATGCGTGTTATGAA+AGG + chr4_1:76579152-76579171 Msa0573380:CDS 35.0%
TCAGTAAATCTCAGCTTCAT+AGG + chr4_1:76579194-76579213 Msa0573380:intron 35.0%
! ACGGGAAGTTTAGAAGATTT+TGG + chr4_1:76579294-76579313 Msa0573380:CDS 35.0%
ATACATGAAACCTATATGGG+TGG + chr4_1:76579449-76579468 Msa0573380:intron 35.0%
AGGGATTGGAAGAAAGATTT+AGG - chr4_1:76579722-76579741 None:intergenic 35.0%
TAAATCTTTCTTCCAATCCC+TGG + chr4_1:76579721-76579740 Msa0573380:intron 35.0%
GAACAGAACATCATTTACCA+GGG - chr4_1:76579741-76579760 None:intergenic 35.0%
AGAACAGAACATCATTTACC+AGG - chr4_1:76579742-76579761 None:intergenic 35.0%
AGATTGCTTTACTGAGAATC+TGG - chr4_1:76579775-76579794 None:intergenic 35.0%
! TAATAGATTGAGGGGTTTTC+GGG + chr4_1:76579847-76579866 Msa0573380:intron 35.0%
!! CATGGTTTAATTTGAACAGC+TGG + chr4_1:76579961-76579980 Msa0573380:intron 35.0%
AGTAACAGTGACACATAAAG+CGG + chr4_1:76580010-76580029 Msa0573380:intron 35.0%
CACTGCAAGTCATTAAGATA+GGG + chr4_1:76580139-76580158 Msa0573380:intron 35.0%
TTATATCTGCCAACTCAAAC+GGG - chr4_1:76580240-76580259 None:intergenic 35.0%
! TTTTTACATTTTCTCGGAGG+GGG - chr4_1:76580284-76580303 None:intergenic 35.0%
TGGAATTGGAAGCTTTACAA+TGG + chr4_1:76580391-76580410 Msa0573380:intron 35.0%
ATCTCATACAGTTGAATCAG+TGG - chr4_1:76580629-76580648 None:intergenic 35.0%
!! GCAGTTTTAGTATGTGATTC+TGG + chr4_1:76580818-76580837 Msa0573380:CDS 35.0%
TCGGTTTCAATTGCAAGGTA+AGG - chr4_1:76572295-76572314 None:intergenic 40.0%
AAGAAGAAGAAGAAGATGGC+AGG + chr4_1:76572434-76572453 Msa0573380:exon 40.0%
AGAAGAAGAAGAAGATGGCA+GGG + chr4_1:76572435-76572454 Msa0573380:exon 40.0%
TAACGTACGTACCTCTGTAT+CGG - chr4_1:76572474-76572493 None:intergenic 40.0%
CCCAAAGGACAAATTCGATA+GGG - chr4_1:76572989-76573008 None:intergenic 40.0%
CCCTATCGAATTTGTCCTTT+GGG + chr4_1:76572986-76573005 Msa0573380:CDS 40.0%
CCTATCGAATTTGTCCTTTG+GGG + chr4_1:76572987-76573006 Msa0573380:CDS 40.0%
CTATCGAATTTGTCCTTTGG+GGG + chr4_1:76572988-76573007 Msa0573380:CDS 40.0%
GAATGAGTTACCTTGCACTT+TGG + chr4_1:76573194-76573213 Msa0573380:intron 40.0%
!! TTGCACTTTGGTGTCTTGTA+GGG + chr4_1:76573206-76573225 Msa0573380:intron 40.0%
CTCTCTTTCAATTAGCAGCT+AGG + chr4_1:76573377-76573396 Msa0573380:intron 40.0%
!! AGTACCAGTGCTATTTAGAC+TGG + chr4_1:76573413-76573432 Msa0573380:intron 40.0%
GATAACTGATAAGTGACCTG+TGG + chr4_1:76573528-76573547 Msa0573380:intron 40.0%
TAACTGATAAGTGACCTGTG+GGG + chr4_1:76573530-76573549 Msa0573380:intron 40.0%
ATTCGTTCAGGACAGTTTCA+AGG + chr4_1:76573589-76573608 Msa0573380:CDS 40.0%
TTCAAGGAGAAGTGAAGTTC+AGG + chr4_1:76573605-76573624 Msa0573380:CDS 40.0%
AGAAGTGAAGTTCAGGTATG+TGG + chr4_1:76573612-76573631 Msa0573380:intron 40.0%
GTATGTGGTTAGTGACCATA+AGG + chr4_1:76573627-76573646 Msa0573380:intron 40.0%
TGGTTTACCATGAAACCATG+TGG + chr4_1:76573767-76573786 Msa0573380:intron 40.0%
TAGTAGCTAGATTGGCAGTT+TGG - chr4_1:76573908-76573927 None:intergenic 40.0%
CAACAAGCTAGTAGCTAGAT+TGG - chr4_1:76573916-76573935 None:intergenic 40.0%
CCAAACACTTGACTCAACAT+TGG - chr4_1:76574030-76574049 None:intergenic 40.0%
CCAATGTTGAGTCAAGTGTT+TGG + chr4_1:76574027-76574046 Msa0573380:intron 40.0%
ATTACATTGTTCCTGTGGCT+CGG - chr4_1:76574131-76574150 None:intergenic 40.0%
AGCCACAGGAACAATGTAAT+TGG + chr4_1:76574131-76574150 Msa0573380:CDS 40.0%
GCCACAGGAACAATGTAATT+GGG + chr4_1:76574132-76574151 Msa0573380:CDS 40.0%
CCACAGGAACAATGTAATTG+GGG + chr4_1:76574133-76574152 Msa0573380:CDS 40.0%
CACAGGAACAATGTAATTGG+GGG + chr4_1:76574134-76574153 Msa0573380:CDS 40.0%
CCGTATATGCACTACAGAAT+AGG + chr4_1:76574173-76574192 Msa0573380:CDS 40.0%
TACCTAGGGGATAAACAGAA+AGG - chr4_1:76574243-76574262 None:intergenic 40.0%
!! TGCTGTAATCAGAAAGCACT+TGG + chr4_1:76574452-76574471 Msa0573380:intron 40.0%
CAAGTGTATCAGAAGAACGA+TGG + chr4_1:76574555-76574574 Msa0573380:intron 40.0%
!! TGCTGAGCATTGATTAAGTG+AGG + chr4_1:76574592-76574611 Msa0573380:intron 40.0%
!! GCTGAGCATTGATTAAGTGA+GGG + chr4_1:76574593-76574612 Msa0573380:intron 40.0%
! GCTTTCTGATCATGGCTTTA+TGG + chr4_1:76574658-76574677 Msa0573380:intron 40.0%
!!! TGATGGGGTGTTTTTTCAAC+GGG + chr4_1:76574704-76574723 Msa0573380:intron 40.0%
AAGAACAACCAGTGCTAAGT+AGG - chr4_1:76574937-76574956 None:intergenic 40.0%
GTTCTTGAGTACAACTTGAC+AGG + chr4_1:76574951-76574970 Msa0573380:intron 40.0%
GGTATCATTGGATACATACG+TGG + chr4_1:76575039-76575058 Msa0573380:CDS 40.0%
AGTAGCATACCTCTTAGCTT+TGG + chr4_1:76575186-76575205 Msa0573380:CDS 40.0%
TTGCATGTTCCAAAGCTAAG+AGG - chr4_1:76575198-76575217 None:intergenic 40.0%
TACATGTGCTAATGTACCCA+TGG - chr4_1:76575311-76575330 None:intergenic 40.0%
! ACCAAAGTGAGGCATTAGAA+GGG + chr4_1:76575373-76575392 Msa0573380:intron 40.0%
! TAGAAGGGGACATCACATTT+TGG + chr4_1:76575388-76575407 Msa0573380:intron 40.0%
! TGTTATTTGTTGGACTCTGG+TGG + chr4_1:76575497-76575516 Msa0573380:intron 40.0%
TCTCTTCTTTAGCAAGGCTT+TGG + chr4_1:76575596-76575615 Msa0573380:intron 40.0%
AACCACAGTGACTGAAATGA+TGG - chr4_1:76575770-76575789 None:intergenic 40.0%
GGGTCTGAAAAATGGCATAA+TGG + chr4_1:76575884-76575903 Msa0573380:CDS 40.0%
TGAGAAGAATTTGGATGGGA+AGG + chr4_1:76576150-76576169 Msa0573380:intron 40.0%
TATTACTCATCTGAATCCCC+AGG + chr4_1:76576199-76576218 Msa0573380:intron 40.0%
ATTACTCATCTGAATCCCCA+GGG + chr4_1:76576200-76576219 Msa0573380:intron 40.0%
!! TTTTGTTTGCACTTGGGACA+AGG + chr4_1:76576495-76576514 Msa0573380:intron 40.0%
!! ACAATGAAGGTGTTGGAACT+TGG - chr4_1:76576589-76576608 None:intergenic 40.0%
TTCCAACACCTTCATTGTGT+TGG + chr4_1:76576591-76576610 Msa0573380:intron 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + chr4_1:76576600-76576619 Msa0573380:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + chr4_1:76576601-76576620 Msa0573380:intron 40.0%
!! ACTTACAAGCCGGTTTTGTA+AGG + chr4_1:76576692-76576711 Msa0573380:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr4_1:76576702-76576721 Msa0573380:intron 40.0%
!!! GTTTTAAGGAAGTCAACAGC+TGG - chr4_1:76577035-76577054 None:intergenic 40.0%
! TTTTTGTACTCTTGCACCGT+TGG - chr4_1:76577284-76577303 None:intergenic 40.0%
GAAAGCAGCTAAAATGTTGC+TGG + chr4_1:76577316-76577335 Msa0573380:CDS 40.0%
!! AAAATGTTGCTGGCTCTTTC+TGG + chr4_1:76577326-76577345 Msa0573380:CDS 40.0%
TGCAACTCGCCTATTATATC+CGG - chr4_1:76577378-76577397 None:intergenic 40.0%
TGGAAGCAAATTGTGACCTT+CGG - chr4_1:76577612-76577631 None:intergenic 40.0%
TTGTGAGCCTCATAAACTTC+CGG - chr4_1:76578024-76578043 None:intergenic 40.0%
CTATAACATCACATGAGCCA+TGG - chr4_1:76578311-76578330 None:intergenic 40.0%
TGGAAAACCTTCAATGACGT+TGG + chr4_1:76578347-76578366 Msa0573380:intron 40.0%
TCAGTTTCCAACGTCATTGA+AGG - chr4_1:76578357-76578376 None:intergenic 40.0%
CATTCATGTTGAGACTCTCT+AGG + chr4_1:76578797-76578816 Msa0573380:intron 40.0%
TGAGACTCTCTAGGTAGAAA+TGG + chr4_1:76578806-76578825 Msa0573380:intron 40.0%
GAGACTCTCTAGGTAGAAAT+GGG + chr4_1:76578807-76578826 Msa0573380:intron 40.0%
AGACTCTCTAGGTAGAAATG+GGG + chr4_1:76578808-76578827 Msa0573380:intron 40.0%
TGCCGTTAAACTTTGGCATA+TGG - chr4_1:76578838-76578857 None:intergenic 40.0%
CGGCATTTGAACACTCAAAT+TGG - chr4_1:76578880-76578899 None:intergenic 40.0%
GTGCAAATTAGAACCCAATC+TGG + chr4_1:76579103-76579122 Msa0573380:intron 40.0%
AATGTTTAATCCAGGAGTCG+AGG + chr4_1:76579263-76579282 Msa0573380:intron 40.0%
! CATTTTCATCTTAGAGGGAC+AGG - chr4_1:76579423-76579442 None:intergenic 40.0%
GAACATCATTTACCAGGGAT+TGG - chr4_1:76579736-76579755 None:intergenic 40.0%
ATAAAGCGGTCAAACTTCCA+GGG + chr4_1:76580024-76580043 Msa0573380:intron 40.0%
! CCTATCTTAATGACTTGCAG+TGG - chr4_1:76580141-76580160 None:intergenic 40.0%
CCACTGCAAGTCATTAAGAT+AGG + chr4_1:76580138-76580157 Msa0573380:intron 40.0%
TATATCTGCCAACTCAAACG+GGG - chr4_1:76580239-76580258 None:intergenic 40.0%
TAGACGAAATTGATACTGGG+TGG - chr4_1:76580310-76580329 None:intergenic 40.0%
! ATTCATTTGGAGCATCTGCA+TGG + chr4_1:76580368-76580387 Msa0573380:intron 40.0%
TGTCAGGAGAGAATATCTCA+AGG + chr4_1:76580757-76580776 Msa0573380:CDS 40.0%
! CTTATCTGACTAGCTAACTC+GGG - chr4_1:76580788-76580807 None:intergenic 40.0%
! GCTTATCTGACTAGCTAACT+CGG - chr4_1:76580789-76580808 None:intergenic 40.0%
GCCCTATCGAATTTGTCCTT+TGG + chr4_1:76572985-76573004 Msa0573380:CDS 45.0%
CCCCAAAGGACAAATTCGAT+AGG - chr4_1:76572990-76573009 None:intergenic 45.0%
TGATCAATATGTGCCCCCAA+AGG - chr4_1:76573004-76573023 None:intergenic 45.0%
CTACAAGACACCAAAGTGCA+AGG - chr4_1:76573207-76573226 None:intergenic 45.0%
!! CTTGCACTTTGGTGTCTTGT+AGG + chr4_1:76573205-76573224 Msa0573380:intron 45.0%
!! ACTTTGGTGTCTTGTAGGGT+GGG + chr4_1:76573210-76573229 Msa0573380:intron 45.0%
GAGACCAGTCTAAATAGCAC+TGG - chr4_1:76573420-76573439 None:intergenic 45.0%
TTAGGAAGCAGCAAGCCTTA+TGG - chr4_1:76573645-76573664 None:intergenic 45.0%
TTGGCATCCACATGGTTTCA+TGG - chr4_1:76573777-76573796 None:intergenic 45.0%
GAAGTAGCCCGTTATCAGAA+TGG - chr4_1:76573951-76573970 None:intergenic 45.0%
CCCCAATTACATTGTTCCTG+TGG - chr4_1:76574136-76574155 None:intergenic 45.0%
CACCTTTCTGTTTATCCCCT+AGG + chr4_1:76574238-76574257 Msa0573380:intron 45.0%
TCATCGAAAGCTGCTACCTA+GGG - chr4_1:76574257-76574276 None:intergenic 45.0%
ATCATCGAAAGCTGCTACCT+AGG - chr4_1:76574258-76574277 None:intergenic 45.0%
!! CAGAAAGCACTTGGTTCAAG+AGG + chr4_1:76574461-76574480 Msa0573380:intron 45.0%
AGCTTGATCCTACTTAGCAC+TGG + chr4_1:76574926-76574945 Msa0573380:intron 45.0%
!! GGATACATACGTGGTTCTGA+TGG + chr4_1:76575048-76575067 Msa0573380:CDS 45.0%
! GCATCAAAAGGCATGCCAAA+GGG + chr4_1:76575350-76575369 Msa0573380:intron 45.0%
! GACCAAAGTGAGGCATTAGA+AGG + chr4_1:76575372-76575391 Msa0573380:intron 45.0%
! CCAAAGTGAGGCATTAGAAG+GGG + chr4_1:76575374-76575393 Msa0573380:intron 45.0%
!! GGCATTTAGAAGCACCTTTC+TGG + chr4_1:76575409-76575428 Msa0573380:intron 45.0%
! CTTCTTTAGCAAGGCTTTGG+TGG + chr4_1:76575599-76575618 Msa0573380:intron 45.0%
CTCCATCATTTCAGTCACTG+TGG + chr4_1:76575765-76575784 Msa0573380:intron 45.0%
CAGTACAGCCTCCTCTATAA+AGG - chr4_1:76576116-76576135 None:intergenic 45.0%
TTATAGAGGAGGCTGTACTG+AGG + chr4_1:76576116-76576135 Msa0573380:intron 45.0%
TTTGCACTTGGGACAAGGAT+GGG + chr4_1:76576500-76576519 Msa0573380:intron 45.0%
GAACTTGGAGGCCACAATTT+AGG - chr4_1:76576574-76576593 None:intergenic 45.0%
!! ATGAAGGTGTTGGAACTTGG+AGG - chr4_1:76576586-76576605 None:intergenic 45.0%
! AGCCAACACAATGAAGGTGT+TGG - chr4_1:76576596-76576615 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG - chr4_1:76576602-76576621 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + chr4_1:76576599-76576618 Msa0573380:intron 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + chr4_1:76576602-76576621 Msa0573380:intron 45.0%
ACACTCCTCAACTTACAAGC+CGG + chr4_1:76576682-76576701 Msa0573380:intron 45.0%
!! CAAAACCGGCTTGTAAGTTG+AGG - chr4_1:76576690-76576709 None:intergenic 45.0%
CACATGGATAGCTCTTCACA+TGG + chr4_1:76576867-76576886 Msa0573380:intron 45.0%
CAAAGAAAGAGATCCGACCA+AGG - chr4_1:76577145-76577164 None:intergenic 45.0%
TAAGCTTATTCACCGGCCAA+CGG + chr4_1:76577265-76577284 Msa0573380:CDS 45.0%
CTACCAACCCCGGATATAAT+AGG + chr4_1:76577366-76577385 Msa0573380:CDS 45.0%
CAACTCGCCTATTATATCCG+GGG - chr4_1:76577376-76577395 None:intergenic 45.0%
GCAACTCGCCTATTATATCC+GGG - chr4_1:76577377-76577396 None:intergenic 45.0%
CATTACACTGTAAGTCCCGA+AGG + chr4_1:76577593-76577612 Msa0573380:intron 45.0%
GGAAGCAAATTGTGACCTTC+GGG - chr4_1:76577611-76577630 None:intergenic 45.0%
!! GTGTTTTTCGTTGATGAGCG+TGG - chr4_1:76577731-76577750 None:intergenic 45.0%
!! ACTTGGTGTGTGATAGTTCC+AGG + chr4_1:76577795-76577814 Msa0573380:intron 45.0%
TTTCTTCCAAGCAGTTGCAC+CGG + chr4_1:76578002-76578021 Msa0573380:intron 45.0%
AGTTGCACCGGAAGTTTATG+AGG + chr4_1:76578014-76578033 Msa0573380:intron 45.0%
GGAAGTTTATGAGGCTCACA+AGG + chr4_1:76578023-76578042 Msa0573380:CDS 45.0%
GACTCTCTAGGTAGAAATGG+GGG + chr4_1:76578809-76578828 Msa0573380:intron 45.0%
! CCACAAGTGCCGTTAAACTT+TGG - chr4_1:76578845-76578864 None:intergenic 45.0%
CCAAAGTTTAACGGCACTTG+TGG + chr4_1:76578842-76578861 Msa0573380:intron 45.0%
GCACTGCACAAACAAAATGC+AGG - chr4_1:76579087-76579106 None:intergenic 45.0%
! TCTGCTCTTTTGGCCAGATT+GGG - chr4_1:76579119-76579138 None:intergenic 45.0%
ATCTTAGAGGGACAGGAAGA+TGG - chr4_1:76579416-76579435 None:intergenic 45.0%
CATAAAGCGGTCAAACTTCC+AGG + chr4_1:76580023-76580042 Msa0573380:intron 45.0%
AAGATAGGGAGCTTTCCTGA+TGG + chr4_1:76580153-76580172 Msa0573380:intron 45.0%
TGCTATTGTGCACAACCATC+AGG - chr4_1:76580171-76580190 None:intergenic 45.0%
!! ACTCAAACGGGGCTAGTTAA+GGG - chr4_1:76580228-76580247 None:intergenic 45.0%
!! AACTCAAACGGGGCTAGTTA+AGG - chr4_1:76580229-76580248 None:intergenic 45.0%
TTAACTAGCCCCGTTTGAGT+TGG + chr4_1:76580228-76580247 Msa0573380:intron 45.0%
GAATCAGTGGTTCAGAACCT+TGG - chr4_1:76580616-76580635 None:intergenic 45.0%
ATACACCAGGAGCTCTCAAT+AGG - chr4_1:76580652-76580671 None:intergenic 45.0%
ATTGAGAGCTCCTGGTGTAT+TGG + chr4_1:76580652-76580671 Msa0573380:CDS 45.0%
TTGAGAGCTCCTGGTGTATT+GGG + chr4_1:76580653-76580672 Msa0573380:CDS 45.0%
ATGATGCAGCTTCAGTAGCA+AGG - chr4_1:76580736-76580755 None:intergenic 45.0%
CTGAAGCTGCATCATTTGTC+AGG + chr4_1:76580741-76580760 Msa0573380:CDS 45.0%
!! GGTTGGTGAAGCGCCAAAAT+CGG - chr4_1:76572314-76572333 None:intergenic 50.0%
GTACGTACCTCTGTATCGGA+AGG - chr4_1:76572470-76572489 None:intergenic 50.0%
TGGATCGCCTTGCTTTGTGA+TGG + chr4_1:76572715-76572734 Msa0573380:intron 50.0%
! GGGGGCACATATTGATCATC+AGG + chr4_1:76573006-76573025 Msa0573380:CDS 50.0%
!! GGTATTAGAGCACTGGGACT+CGG + chr4_1:76573109-76573128 Msa0573380:intron 50.0%
!! CACTTTGGTGTCTTGTAGGG+TGG + chr4_1:76573209-76573228 Msa0573380:intron 50.0%
!! CTTCTGGGGTTTACTCCTTC+TGG + chr4_1:76573266-76573285 Msa0573380:CDS 50.0%
! TACTCCTTCTGGAAGCGATG+AGG + chr4_1:76573277-76573296 Msa0573380:CDS 50.0%
TTCACCTCATCGCTTCCAGA+AGG - chr4_1:76573284-76573303 None:intergenic 50.0%
ACAACCCACTCCTTATTCGC+TGG + chr4_1:76573809-76573828 Msa0573380:intron 50.0%
CAACCCACTCCTTATTCGCT+GGG + chr4_1:76573810-76573829 Msa0573380:intron 50.0%
GATCCCAGCGAATAAGGAGT+GGG - chr4_1:76573816-76573835 None:intergenic 50.0%
GATGAGGATCCCAGCGAATA+AGG - chr4_1:76573822-76573841 None:intergenic 50.0%
AGAGAATTCTTCCGAGCCAC+AGG + chr4_1:76574117-76574136 Msa0573380:CDS 50.0%
!! AATTGGGGGCGTTATGCTAG+AGG + chr4_1:76574148-76574167 Msa0573380:CDS 50.0%
CATCGAAAGCTGCTACCTAG+GGG - chr4_1:76574256-76574275 None:intergenic 50.0%
AAGCACTTGGTTCAAGAGGC+TGG + chr4_1:76574465-76574484 Msa0573380:intron 50.0%
GAGTACAACTTGACAGGTGC+AGG + chr4_1:76574957-76574976 Msa0573380:intron 50.0%
!! CATACGTGGTTCTGATGGTC+TGG + chr4_1:76575053-76575072 Msa0573380:CDS 50.0%
TCTGATGGTCTGGACAGTTC+AGG + chr4_1:76575063-76575082 Msa0573380:CDS 50.0%
! GGCATCAAAAGGCATGCCAA+AGG + chr4_1:76575349-76575368 Msa0573380:intron 50.0%
ATGCCAAAGGGACCAAAGTG+AGG + chr4_1:76575362-76575381 Msa0573380:intron 50.0%
ATGCCTCACTTTGGTCCCTT+TGG - chr4_1:76575368-76575387 None:intergenic 50.0%
CCCCTTCTAATGCCTCACTT+TGG - chr4_1:76575377-76575396 None:intergenic 50.0%
CTCTGGTGGCAAGCAACTTA+TGG + chr4_1:76575511-76575530 Msa0573380:intron 50.0%
! CTTTGGTGGCTTTCAGCTCA+AGG + chr4_1:76575613-76575632 Msa0573380:intron 50.0%
TGGCTTTCAGCTCAAGGCAT+TGG + chr4_1:76575619-76575638 Msa0573380:intron 50.0%
GTTTGCACTTGGGACAAGGA+TGG + chr4_1:76576499-76576518 Msa0573380:intron 50.0%
ACAATTTAGGCGACTAGGGG+CGG - chr4_1:76576561-76576580 None:intergenic 50.0%
GCCACAATTTAGGCGACTAG+GGG - chr4_1:76576564-76576583 None:intergenic 50.0%
GGCCACAATTTAGGCGACTA+GGG - chr4_1:76576565-76576584 None:intergenic 50.0%
AGGCCACAATTTAGGCGACT+AGG - chr4_1:76576566-76576585 None:intergenic 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr4_1:76576622-76576641 Msa0573380:intron 50.0%
! CAAGCTTTGACTACCAACCC+CGG + chr4_1:76577356-76577375 Msa0573380:CDS 50.0%
TCGCCTATTATATCCGGGGT+TGG - chr4_1:76577372-76577391 None:intergenic 50.0%
GCGAGTTGCAGAGTGTAAAG+AGG + chr4_1:76577388-76577407 Msa0573380:CDS 50.0%
CAGAGTGTAAAGAGGCTGCA+CGG + chr4_1:76577396-76577415 Msa0573380:CDS 50.0%
AAACTTCCGGTGCAACTGCT+TGG - chr4_1:76578011-76578030 None:intergenic 50.0%
GTTCCTGAAGCTCCTCACAA+TGG + chr4_1:76578506-76578525 Msa0573380:intron 50.0%
TCTCCATTGTGAGGAGCTTC+AGG - chr4_1:76578512-76578531 None:intergenic 50.0%
! CTCTGCTCTTTTGGCCAGAT+TGG - chr4_1:76579120-76579139 None:intergenic 50.0%
TTAATCCAGGAGTCGAGGCT+TGG + chr4_1:76579268-76579287 Msa0573380:intron 50.0%
TAATCCAGGAGTCGAGGCTT+GGG + chr4_1:76579269-76579288 Msa0573380:intron 50.0%
GGAATTCTCATCGCTGCTTC+TGG + chr4_1:76579315-76579334 Msa0573380:CDS 50.0%
TTCTCATCGCTGCTTCTGGT+CGG + chr4_1:76579319-76579338 Msa0573380:CDS 50.0%
! CATTTGGAGCATCTGCATGG+TGG + chr4_1:76580371-76580390 Msa0573380:intron 50.0%
! GAGCATCTGCATGGTGGAAT+TGG + chr4_1:76580377-76580396 Msa0573380:intron 50.0%
GAGATCCTATTGAGAGCTCC+TGG + chr4_1:76580644-76580663 Msa0573380:CDS 50.0%
TGAGAGCTCCTGGTGTATTG+GGG + chr4_1:76580654-76580673 Msa0573380:CDS 50.0%
! TTCAGTGGTGCTGGGTTTAG+AGG + chr4_1:76580683-76580702 Msa0573380:CDS 50.0%
AGGATGCTGTATTGCCCTTG+TGG + chr4_1:76580703-76580722 Msa0573380:CDS 50.0%
ATGCTGTATTGCCCTTGTGG+AGG + chr4_1:76580706-76580725 Msa0573380:CDS 50.0%
AGAAGATGGCAGGGTCGTGT+TGG + chr4_1:76572444-76572463 Msa0573380:exon 55.0%
!! GTGTTGGCCTTCCGATACAG+AGG + chr4_1:76572460-76572479 Msa0573380:CDS 55.0%
GCAAGGCGATCCAATCCGTA+TGG - chr4_1:76572708-76572727 None:intergenic 55.0%
GGATCCCAGCGAATAAGGAG+TGG - chr4_1:76573817-76573836 None:intergenic 55.0%
GGAGGCTGTACTGAGGAAAC+AGG + chr4_1:76576123-76576142 Msa0573380:intron 55.0%
GGGGCGGACCGTAATAAAAG+CGG - chr4_1:76576545-76576564 None:intergenic 55.0%
GCCCCTAGTCGCCTAAATTG+TGG + chr4_1:76576560-76576579 Msa0573380:intron 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + chr4_1:76576605-76576624 Msa0573380:intron 55.0%
TGTACTCTTGCACCGTTGGC+CGG - chr4_1:76577280-76577299 None:intergenic 55.0%
TGCTAGGGTGCATGTGCTTC+TGG - chr4_1:76577753-76577772 None:intergenic 55.0%
GCGGAGCACATCCTGTCAAA+TGG + chr4_1:76577868-76577887 Msa0573380:CDS 55.0%
!! GCATGAGAGCTTGCTGAAGC+TGG - chr4_1:76578778-76578797 None:intergenic 55.0%
AGGAGTCGAGGCTTGGGAAA+CGG + chr4_1:76579275-76579294 Msa0573380:intron 55.0%
AAGCGGTCAAACTTCCAGGG+TGG + chr4_1:76580027-76580046 Msa0573380:intron 55.0%
AGCGGTCAAACTTCCAGGGT+GGG + chr4_1:76580028-76580047 Msa0573380:intron 55.0%
AGTGACATCTGATCCCACCC+TGG - chr4_1:76580044-76580063 None:intergenic 55.0%
AGGGTGGGATCAGATGTCAC+TGG + chr4_1:76580043-76580062 Msa0573380:intron 55.0%
GAGAGCTCCTGGTGTATTGG+GGG + chr4_1:76580655-76580674 Msa0573380:CDS 55.0%
AAACGTGCCCCCAATACACC+AGG - chr4_1:76580665-76580684 None:intergenic 55.0%
! GTATTGGGGGCACGTTTCAG+TGG + chr4_1:76580668-76580687 Msa0573380:CDS 55.0%
! AGCAAGGTGCTCCTCCACAA+GGG - chr4_1:76580720-76580739 None:intergenic 55.0%
! TAGCAAGGTGCTCCTCCACA+AGG - chr4_1:76580721-76580740 None:intergenic 55.0%
! CTGACTAGCTAACTCGGGCT+GGG - chr4_1:76580783-76580802 None:intergenic 55.0%
! TCTGACTAGCTAACTCGGGC+TGG - chr4_1:76580784-76580803 None:intergenic 55.0%
GTTTCCCAAGCCTCGACTCC+TGG - chr4_1:76579276-76579295 None:intergenic 60.0%
GGAGTCGAGGCTTGGGAAAC+GGG + chr4_1:76579276-76579295 Msa0573380:intron 60.0%
GGGCACGTTTCAGTGGTGCT+GGG + chr4_1:76580675-76580694 Msa0573380:CDS 60.0%
GGGGCACGTTTCAGTGGTGC+TGG + chr4_1:76580674-76580693 Msa0573380:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 76572169 76581053 76572169 ID=Msa0573380;Name=Msa0573380
chr4_1 mRNA 76572169 76581053 76572169 ID=Msa0573380-mRNA-1;Parent=Msa0573380;Name=Msa0573380-mRNA-1;_AED=0.07;_eAED=0.07;_QI=280|1|1|1|1|1|14|191|437
chr4_1 exon 76572169 76572481 76572169 ID=Msa0573380-mRNA-1:exon:26769;Parent=Msa0573380-mRNA-1
chr4_1 exon 76572914 76573027 76572914 ID=Msa0573380-mRNA-1:exon:26770;Parent=Msa0573380-mRNA-1
chr4_1 exon 76573227 76573298 76573227 ID=Msa0573380-mRNA-1:exon:26771;Parent=Msa0573380-mRNA-1
chr4_1 exon 76573583 76573626 76573583 ID=Msa0573380-mRNA-1:exon:26772;Parent=Msa0573380-mRNA-1
chr4_1 exon 76574060 76574213 76574060 ID=Msa0573380-mRNA-1:exon:26773;Parent=Msa0573380-mRNA-1
chr4_1 exon 76575039 76575104 76575039 ID=Msa0573380-mRNA-1:exon:26774;Parent=Msa0573380-mRNA-1
chr4_1 exon 76575181 76575260 76575181 ID=Msa0573380-mRNA-1:exon:26775;Parent=Msa0573380-mRNA-1
chr4_1 exon 76575863 76575962 76575863 ID=Msa0573380-mRNA-1:exon:26776;Parent=Msa0573380-mRNA-1
chr4_1 exon 76577254 76577429 76577254 ID=Msa0573380-mRNA-1:exon:26777;Parent=Msa0573380-mRNA-1
chr4_1 exon 76577849 76577889 76577849 ID=Msa0573380-mRNA-1:exon:26778;Parent=Msa0573380-mRNA-1
chr4_1 exon 76578016 76578044 76578016 ID=Msa0573380-mRNA-1:exon:26779;Parent=Msa0573380-mRNA-1
chr4_1 exon 76579104 76579173 76579104 ID=Msa0573380-mRNA-1:exon:26780;Parent=Msa0573380-mRNA-1
chr4_1 exon 76579277 76579366 76579277 ID=Msa0573380-mRNA-1:exon:26781;Parent=Msa0573380-mRNA-1
chr4_1 exon 76580618 76581053 76580618 ID=Msa0573380-mRNA-1:exon:26782;Parent=Msa0573380-mRNA-1
chr4_1 five_prime_UTR 76572169 76572448 76572169 ID=Msa0573380-mRNA-1:five_prime_utr;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76572449 76572481 76572449 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76572914 76573027 76572914 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76573227 76573298 76573227 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76573583 76573626 76573583 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76574060 76574213 76574060 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76575039 76575104 76575039 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76575181 76575260 76575181 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76575863 76575962 76575863 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76577254 76577429 76577254 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76577849 76577889 76577849 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76578016 76578044 76578016 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76579104 76579173 76579104 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76579277 76579366 76579277 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 CDS 76580618 76580862 76580618 ID=Msa0573380-mRNA-1:cds;Parent=Msa0573380-mRNA-1
chr4_1 three_prime_UTR 76580863 76581053 76580863 ID=Msa0573380-mRNA-1:three_prime_utr;Parent=Msa0573380-mRNA-1
Gene Sequence

>Msa0573380

ATGGCAGGGTCGTGTTGGCCTTCCGATACAGAGCTAAATGAAATGAGAGAGAAAGTTTCTCAAATGGCAAAGGTGAAGAAAGAGCATGTTCGAGTTGTCGTATCGCCCTATCGAATTTGTCCTTTGGGGGCACATATTGATCATCAGGGTGGGACTGTTTTAGCTATGACAATCAATAAGGGAATACTTCTGGGGTTTACTCCTTCTGGAAGCGATGAGTTTGTAATTCGTTCAGGACAGTTTCAAGGAGAAGTGAAGTTCAGAGTTGATGATATTCAGCAGCCAGTGCAAACTACTAAGACAAAAAATGATAACATGGCAGAGAATTCTTCCGAGCCACAGGAACAATGTAATTGGGGGCGTTATGCTAGAGGAGCCGTATATGCACTACAGAATAGGGGACACAATATTTCAAAGGGTATCATTGGATACATACGTGGTTCTGATGGTCTGGACAGTTCAGGCTTAAGTTCTTCTGCCGCAGTTGGAGTAGCATACCTCTTAGCTTTGGAACATGCAAATGATTTAGTAATATCTCCTACTGAAAATATTGAATATGATAGGTTGATTGAGAATGAATATTTGGGTCTGAAAAATGGCATAATGGACCAATCAGCTATACTACTTTCAAGACATGGTTGTTTGATGTGCATGAATTGCAAGACGAAAGAATATAAGCTTATTCACCGGCCAACGGTGCAAGAGTACAAAAAGAGTGAACAACCGAAAGCAGCTAAAATGTTGCTGGCTCTTTCTGGTTTGAAGCAAGCTTTGACTACCAACCCCGGATATAATAGGCGAGTTGCAGAGTGTAAAGAGGCTGCACGGATTCTTCTTGAATCATCTGGAGATTATGAAGCGGAGCACATCCTGTCAAATGTTGCACCGGAAGTTTATGAGGCTCACAAGTGCAAATTAGAACCCAATCTGGCCAAAAGAGCAGAGCATTATTTCTCAGAGAATATGCGTGTTATGAAAGGAGTCGAGGCTTGGGAAACGGGAAGTTTAGAAGATTTTGGAATTCTCATCGCTGCTTCTGGTCGGAGTTCCATTCAAAATTATGAATGTGGTTCTGAACCACTGATTCAACTGTATGAGATCCTATTGAGAGCTCCTGGTGTATTGGGGGCACGTTTCAGTGGTGCTGGGTTTAGAGGATGCTGTATTGCCCTTGTGGAGGAGCACCTTGCTACTGAAGCTGCATCATTTGTCAGGAGAGAATATCTCAAGGCCCAGCCCGAGTTAGCTAGTCAGATAAGCAGAGATACTGCAGTTTTAGTATGTGATTCTGGTGATTGTGCACGTGTAATTTGA

Protein sequence

>Msa0573380

MAGSCWPSDTELNEMREKVSQMAKVKKEHVRVVVSPYRICPLGAHIDHQGGTVLAMTINKGILLGFTPSGSDEFVIRSGQFQGEVKFRVDDIQQPVQTTKTKNDNMAENSSEPQEQCNWGRYARGAVYALQNRGHNISKGIIGYIRGSDGLDSSGLSSSAAVGVAYLLALEHANDLVISPTENIEYDRLIENEYLGLKNGIMDQSAILLSRHGCLMCMNCKTKEYKLIHRPTVQEYKKSEQPKAAKMLLALSGLKQALTTNPGYNRRVAECKEAARILLESSGDYEAEHILSNVAPEVYEAHKCKLEPNLAKRAEHYFSENMRVMKGVEAWETGSLEDFGILIAASGRSSIQNYECGSEPLIQLYEILLRAPGVLGARFSGAGFRGCCIALVEEHLATEAASFVRREYLKAQPELASQISRDTAVLVCDSGDCARVI*