AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0610910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610910 MtrunA17_Chr4g0044181 97.027 639 18 1 1 639 1 638 0.0 1277
Msa0610910 MtrunA17_Chr1g0160461 77.727 651 80 15 1 638 1 599 0.0 934
Msa0610910 MtrunA17_Chr6g0478431 61.810 652 167 11 1 639 1 583 0.0 748
Msa0610910 MtrunA17_Chr7g0255941 59.970 657 158 12 1 639 1 570 0.0 710
Msa0610910 MtrunA17_Chr4g0071571 57.164 663 201 15 1 639 1 604 0.0 694
Msa0610910 MtrunA17_Chr8g0393111 62.682 343 95 6 1 338 1 315 1.98e-141 422
Msa0610910 MtrunA17_Chr8g0393111 63.235 204 34 3 450 630 332 517 9.44e-72 241
Msa0610910 MtrunA17_Chr4g0071551 75.117 213 52 1 1 212 1 213 9.08e-115 342
Msa0610910 MtrunA17_Chr1g0159341 54.515 299 106 7 1 288 1 280 4.77e-96 305
Msa0610910 MtrunA17_Chr1g0159341 42.593 324 146 6 322 639 217 506 3.74e-55 196
Msa0610910 MtrunA17_Chr4g0071561 75.342 146 36 0 491 636 171 316 5.48e-72 235
Msa0610910 MtrunA17_Chr4g0071561 34.641 153 81 6 218 355 1 149 3.57e-11 65.1
Msa0610910 MtrunA17_Chr2g0298971 47.410 251 110 3 1 251 1 229 1.22e-71 240
Msa0610910 MtrunA17_Chr2g0298971 44.444 189 74 3 482 639 329 517 4.25e-43 162
Msa0610910 MtrunA17_Chr7g0216571 66.423 137 46 0 503 639 210 346 5.07e-55 191
Msa0610910 MtrunA17_Chr7g0216571 54.430 158 72 0 1 158 12 169 3.40e-51 181
Msa0610910 MtrunA17_Chr6g0452821 62.676 142 51 1 500 639 198 339 7.36e-53 185
Msa0610910 MtrunA17_Chr6g0452821 54.430 158 71 1 1 157 1 158 2.21e-49 176
Msa0610910 MtrunA17_Chr7g0249141 51.613 155 75 0 1 155 1 155 5.62e-48 172
Msa0610910 MtrunA17_Chr7g0249141 49.007 151 72 1 489 639 195 340 5.31e-44 161
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610910 AT2G01420.1 72.462 650 109 14 1 639 1 591 0.0 901
Msa0610910 AT2G01420.2 72.308 650 114 14 1 639 1 595 0.0 894
Msa0610910 AT1G70940.1 73.394 654 124 14 1 639 1 619 0.0 894
Msa0610910 AT1G23080.1 72.214 655 109 15 1 639 1 598 0.0 874
Msa0610910 AT1G23080.3 71.603 655 109 15 1 639 1 594 0.0 869
Msa0610910 AT1G23080.4 71.603 655 109 15 1 639 1 594 0.0 869
Msa0610910 AT2G01420.3 70.455 572 103 14 1 561 1 517 0.0 752
Msa0610910 AT1G23080.2 69.324 577 100 15 1 561 1 516 0.0 741
Msa0610910 AT5G57090.1 57.658 666 213 14 1 638 1 625 0.0 689
Msa0610910 AT1G73590.1 57.515 652 211 11 1 638 1 600 0.0 682
Msa0610910 AT5G57090.2 54.594 566 188 14 101 638 1 525 0.0 525
Msa0610910 AT1G77110.2 44.670 394 175 9 1 363 1 382 1.11e-98 313
Msa0610910 AT1G77110.2 56.784 199 78 3 447 638 351 548 2.68e-63 219
Msa0610910 AT1G77110.1 44.670 394 175 9 1 363 1 382 1.78e-98 313
Msa0610910 AT1G77110.1 56.784 199 78 3 447 638 351 548 5.30e-63 219
Msa0610910 AT5G15100.1 59.441 143 58 0 497 639 204 346 7.49e-50 177
Msa0610910 AT5G15100.1 48.023 177 82 2 1 172 1 172 1.19e-44 163
Msa0610910 AT5G16530.2 52.866 157 74 0 1 157 1 157 8.44e-50 176
Msa0610910 AT5G16530.2 54.135 133 61 0 506 638 195 327 2.83e-45 164
Msa0610910 AT5G16530.1 52.866 157 74 0 1 157 1 157 2.59e-49 176
Msa0610910 AT5G16530.1 53.731 134 62 0 506 639 195 328 6.79e-45 164

Find 218 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCAATTGTTTCCTTTA+AGG 0.034620 4_2:+58830266 Msa0610910:CDS
CTTCCAAGTTTCCCAAAATT+TGG 0.036446 4_2:+58833482 Msa0610910:three_prime_UTR
TTAATGAAGTTCCCAAATTT+TGG 0.115422 4_2:-58833494 None:intergenic
GCTCCGAGACATTCTAATTT+TGG 0.163099 4_2:+58830531 Msa0610910:CDS
TGCTCTTTGCACTTACAATT+TGG 0.180770 4_2:+58830004 Msa0610910:CDS
ACCCTCTCGGCGTCGGATTC+CGG 0.187026 4_2:-58830467 None:intergenic
TTTGGTCTCTTGTGGCATTT+AGG 0.201887 4_2:+58831438 Msa0610910:CDS
TATATGCACAGGTTTGTTTA+TGG 0.222888 4_2:+58832443 Msa0610910:intron
ACTCCACCAAGCTCTGTTTC+TGG 0.225716 4_2:-58831179 None:intergenic
CCCTCTCGGCGTCGGATTCC+GGG 0.257869 4_2:-58830466 None:intergenic
ACAATTGAAGCAGCAGTTTC+AGG 0.260215 4_2:-58830255 None:intergenic
ATGGCTGTTCGATTTCTTAC+AGG 0.260480 4_2:+58832516 Msa0610910:CDS
AACATCAGAATCAACCTTAA+AGG 0.263830 4_2:-58830280 None:intergenic
ACCGCTGTTGCAGCTGGCGC+AGG 0.267633 4_2:-58830627 None:intergenic
AGTAATTCTTCTTCTTTAAC+TGG 0.268630 4_2:-58831218 None:intergenic
TGGGAGTATGCAAGCATTCT+TGG 0.269128 4_2:+58833349 Msa0610910:three_prime_UTR
GCTGTGAACTCTCCGAAATT+TGG 0.269865 4_2:+58830654 Msa0610910:CDS
CCAGCCTCATTGGTCTAATT+TGG 0.276052 4_2:+58831420 Msa0610910:CDS
ATTACCCAACACTTTGGTTA+TGG 0.281307 4_2:+58830086 Msa0610910:CDS
TCACCATGGGTTGCATTAAA+AGG 0.301857 4_2:-58833847 None:intergenic
TTAAATTTGACCTATTGATT+TGG 0.306746 4_2:+58833513 Msa0610910:three_prime_UTR
CCAAACCCGGAATTCTCTTC+CGG 0.312568 4_2:+58830717 Msa0610910:CDS
CTCAACCCGGAAGAGAATTC+CGG 0.312908 4_2:-58830723 None:intergenic
TCTTCGAAGTTTGACGGTCT+TGG 0.314319 4_2:-58830600 None:intergenic
TTCCAAGTTTCCCAAAATTT+GGG 0.316455 4_2:+58833483 Msa0610910:three_prime_UTR
GAACAATAGCTACACGTAAA+AGG 0.317468 4_2:-58832587 None:intergenic
TTACCCAACACTTTGGTTAT+GGG 0.317734 4_2:+58830087 Msa0610910:CDS
AATCTCCTTGGCACCTTGTT+CGG 0.320304 4_2:-58830991 None:intergenic
TCTGATGTTGTTTCGCTTGA+TGG 0.320421 4_2:+58830294 Msa0610910:CDS
ATGTAGTAGACTAGAGTAAT+TGG 0.323819 4_2:-58833239 None:intergenic
AGTTAAAGAAGAAGAATTAC+TGG 0.326836 4_2:+58831220 Msa0610910:CDS
TGAATATTCCGGTACCCTTA+TGG 0.333095 4_2:+58830137 Msa0610910:CDS
TTTCTCAGCTCTTGAAAATT+GGG 0.340802 4_2:-58833561 None:intergenic
GGAATGGCTATGTTCAGTTT+AGG 0.344369 4_2:+58831692 Msa0610910:CDS
CCCTGCGCCAGCTGCAACAG+CGG 0.347912 4_2:+58830626 Msa0610910:CDS
AGCCCGCTGGCTTCGGAAAC+CGG 0.349252 4_2:-58830912 None:intergenic
CTGAGCTTAATTTATAGAAA+TGG 0.349696 4_2:-58833913 None:intergenic
GCCTGCACCGCTGTTGCAGC+TGG 0.349760 4_2:-58830633 None:intergenic
ATGAGGCTGGAGTACGTGTT+TGG 0.350182 4_2:-58831407 None:intergenic
GAGACACAACAGAGGAAAAC+AGG 0.352248 4_2:+58833609 Msa0610910:three_prime_UTR
GGCAGTGGTGCTGCTGATTA+CGG 0.358865 4_2:+58830945 Msa0610910:CDS
CTAGTCTACTACATATTACT+TGG 0.360308 4_2:+58833248 Msa0610910:three_prime_UTR
TTGAGATAGGAGGGTAAAGT+TGG 0.360314 4_2:-58829701 None:intergenic
GCCGGATAAAATCCAAATTT+CGG 0.361171 4_2:-58830666 None:intergenic
TGGACTAATTTCACAGCTAA+TGG 0.361197 4_2:+58830024 Msa0610910:CDS
CCGGAAGAGAATTCCGGGTT+TGG 0.361318 4_2:-58830717 None:intergenic
TTTACGTGTAGCTATTGTTC+AGG 0.368472 4_2:+58832590 Msa0610910:CDS
GCCAGCTGCAACAGCGGTGC+AGG 0.368848 4_2:+58830632 Msa0610910:CDS
TCAGAAAATCAAACGCTTCC+CGG 0.368913 4_2:+58830376 Msa0610910:CDS
GACTTGAAGCCCGCTGGCTT+CGG 0.369456 4_2:-58830919 None:intergenic
GTGTACTTTCGTTTCTGTTA+AGG 0.371814 4_2:-58829609 None:intergenic
TGGAGTCGGCCCACGTGAAT+TGG 0.371998 4_2:-58830580 None:intergenic
TGCTATGAACCTATAGTTCA+TGG 0.375035 4_2:-58829956 None:intergenic
CAAACCCGGAATTCTCTTCC+GGG 0.382809 4_2:+58830718 Msa0610910:CDS
AACCTATAGTTCATGGCATA+AGG 0.386855 4_2:-58829949 None:intergenic
GTGTAGCTCCGCCGTTGAGC+TGG 0.387107 4_2:-58831297 None:intergenic
TAGTCCAGTCACAACTTAAC+TGG 0.390784 4_2:+58829639 Msa0610910:five_prime_UTR
ATACTGTCTGATGCTGGTCT+TGG 0.394410 4_2:+58831671 Msa0610910:CDS
AGGGTAAAGTTGGAAGAAAA+AGG 0.397293 4_2:-58829691 None:intergenic
CGCCGGTTTCCGAAGCCAGC+GGG 0.398599 4_2:+58830910 Msa0610910:CDS
TGGAGTACGTGTTTGGGTTA+CGG 0.405705 4_2:-58831400 None:intergenic
TAACTGGTTCAGTTAATTAA+CGG 0.408756 4_2:+58829655 Msa0610910:five_prime_UTR
TCAACCCGGAAGAGAATTCC+GGG 0.410364 4_2:-58830722 None:intergenic
GTCTCATTCTGATCATGGTT+TGG 0.411195 4_2:+58831366 Msa0610910:CDS
AGAATTTGAGCCAAATCAAT+AGG 0.411948 4_2:-58833523 None:intergenic
TGGTTCTTCAGTGTATCATT+TGG 0.415072 4_2:+58830169 Msa0610910:CDS
AAGACCAGCATCAGACAGTA+TGG 0.415534 4_2:-58831669 None:intergenic
TGTAAGCAACGTGTCAATCT+TGG 0.416495 4_2:+58833806 Msa0610910:three_prime_UTR
GTTTCCACATGCAATCATCT+TGG 0.416723 4_2:-58832475 None:intergenic
GAGAATTCCGGGTTTGGAGC+TGG 0.417175 4_2:-58830711 None:intergenic
CCGCTGTTGCAGCTGGCGCA+GGG 0.420973 4_2:-58830626 None:intergenic
TTTCCACATGCAATCATCTT+GGG 0.421858 4_2:-58832474 None:intergenic
GACCCGTCTCATTCTGATCA+TGG 0.423697 4_2:+58831361 Msa0610910:CDS
GCTATGTATGGTGAATATTC+CGG 0.424658 4_2:+58830126 Msa0610910:CDS
TTTATAGCTTGAGTTCTTCC+CGG 0.424860 4_2:+58830448 Msa0610910:CDS
TTGATTATGTCTTTGTAAGT+TGG 0.428805 4_2:-58833297 None:intergenic
TAGAAGATGAGGTAGAGAAA+GGG 0.433169 4_2:+58831243 Msa0610910:CDS
TGAGGCTGGAGTACGTGTTT+GGG 0.435204 4_2:-58831406 None:intergenic
ACCCTTATGCCATGAACTAT+AGG 0.435554 4_2:+58829947 Msa0610910:CDS
TGCCGGAGGCATGTGTTTCA+CGG 0.440799 4_2:-58831330 None:intergenic
CCTAGCTTGTTCAGAGCAGC+TGG 0.440938 4_2:-58831269 None:intergenic
CTCAGTTGCTTCATTTGCCA+TGG 0.441201 4_2:+58832497 Msa0610910:CDS
AACACGTACTCCAGCCTCAT+TGG 0.443272 4_2:+58831410 Msa0610910:CDS
GTAGAAGATGAGGTAGAGAA+AGG 0.444020 4_2:+58831242 Msa0610910:CDS
GAACCACAACTTGAACCATA+AGG 0.450783 4_2:-58830152 None:intergenic
TACCCTTATGGTTCAAGTTG+TGG 0.453299 4_2:+58830149 Msa0610910:CDS
GCTGCAGCTTCCATTGCTGT+TGG 0.453701 4_2:+58832552 Msa0610910:CDS
TACGGATTTCTACTCTATGA+TGG 0.460158 4_2:+58830503 Msa0610910:CDS
GGGTTCTCTTCGAAGTTTGA+CGG 0.460671 4_2:-58830606 None:intergenic
AGAATTCCGGGTTTGGAGCT+GGG 0.465010 4_2:-58830710 None:intergenic
ATGTGTTTCACGGTGGCTGT+TGG 0.465776 4_2:-58831320 None:intergenic
GCCAGCGGGCTTCAAGTCTT+CGG 0.465927 4_2:+58830924 Msa0610910:CDS
GGCGGTGGAGTTGTTGAGAT+AGG 0.466466 4_2:-58829714 None:intergenic
TGGTCTAATTTGGTCTCTTG+TGG 0.467394 4_2:+58831430 Msa0610910:CDS
TTGGTAACAGTACCACCATT+TGG 0.468111 4_2:-58831041 None:intergenic
TGTTCCATTTGTGTTTGCTA+AGG 0.469104 4_2:+58833049 Msa0610910:CDS
TACTCCTTAGCAAACACAAA+TGG 0.469935 4_2:-58833053 None:intergenic
CCACTTCTCATAGCTATGTA+TGG 0.471301 4_2:+58830114 Msa0610910:CDS
AAATTAGACCCTCTCGGCGT+CGG 0.473693 4_2:-58830474 None:intergenic
CAATTACCCTGTACTAAGAA+TGG 0.474245 4_2:-58833090 None:intergenic
TCTTACAGGTCCTGCAGTCA+TGG 0.474564 4_2:+58832530 Msa0610910:CDS
AGAAGATGAGGTAGAGAAAG+GGG 0.475046 4_2:+58831244 Msa0610910:CDS
CATCCAGCCATTCTTAGTAC+AGG 0.476526 4_2:+58833083 Msa0610910:CDS
ATCCACAATGTGACACACTT+TGG 0.478646 4_2:-58833375 None:intergenic
AGACGGGTCATAACACTTGC+CGG 0.480200 4_2:-58831347 None:intergenic
AAAATCATGGCTACGTAAAG+TGG 0.485356 4_2:-58829805 None:intergenic
CCATTGTTAGTAACTGTTTG+TGG 0.486279 4_2:-58830816 None:intergenic
TACCCTGTACTAAGAATGGC+TGG 0.487434 4_2:-58833086 None:intergenic
ACCTATAGTTCATGGCATAA+GGG 0.489456 4_2:-58829948 None:intergenic
TGTGTTTCACGGTGGCTGTT+GGG 0.490533 4_2:-58831319 None:intergenic
TGCCAAGGAGATTAGAATGT+TGG 0.494027 4_2:+58831001 Msa0610910:CDS
GCCGAAGACTTGAAGCCCGC+TGG 0.494057 4_2:-58830925 None:intergenic
AACTGTGTAGAGATCGTGCC+AGG 0.494115 4_2:-58829767 None:intergenic
TACGGAGCGTCTGATCAATC+TGG 0.494664 4_2:+58830963 Msa0610910:CDS
TTCTCACCGGACCAATGCTC+CGG 0.496572 4_2:+58829859 Msa0610910:CDS
GAGTCATCATAAAAGATCTC+CGG 0.496982 4_2:-58830395 None:intergenic
ATTCCCATAACCAAAGTGTT+GGG 0.498180 4_2:-58830090 None:intergenic
AGTTAAGTTGTGACTGGACT+AGG 0.500941 4_2:-58829637 None:intergenic
GATGCTGAGGTTGGTGATGA+TGG 0.502427 4_2:+58830336 Msa0610910:CDS
GGGCTTCAAGTCTTCGGCAG+TGG 0.503519 4_2:+58830930 Msa0610910:CDS
AACGGTTTATGCCGGAGCAT+TGG 0.504476 4_2:-58829870 None:intergenic
AGAATTACTGGTAGAAGATG+AGG 0.507214 4_2:+58831232 Msa0610910:CDS
CTGCGAAAATCGCGACGAAA+CGG 0.508205 4_2:-58829888 None:intergenic
TCCATTGCTGTTGGCCTGCG+TGG 0.508632 4_2:+58832561 Msa0610910:CDS
CCCGGAATCCGACGCCGAGA+GGG 0.510089 4_2:+58830466 Msa0610910:CDS
ATCTCCATACTGTCTGATGC+TGG 0.512641 4_2:+58831665 Msa0610910:CDS
GTGGAGCTCTAGTGCCTCGC+CGG 0.515018 4_2:+58830893 Msa0610910:CDS
CCTTCATCAAAATGATAACC+TGG 0.515680 4_2:+58829749 Msa0610910:exon
TTCAACATTACCCAACACTT+TGG 0.515765 4_2:+58830080 Msa0610910:CDS
ATAAAATTCGTGTTCACCAT+GGG 0.516104 4_2:-58833860 None:intergenic
AACCACAACTTGAACCATAA+GGG 0.517091 4_2:-58830151 None:intergenic
AACCAACATTCTAATCTCCT+TGG 0.518921 4_2:-58831003 None:intergenic
AAGTTTGACGGTCTTGGAGT+CGG 0.519783 4_2:-58830594 None:intergenic
CCAAATTAGACCAATGAGGC+TGG 0.520634 4_2:-58831420 None:intergenic
CCGGTGAGATTCGACGGCCG+TGG 0.521431 4_2:-58830417 None:intergenic
CATAAAATTCGTGTTCACCA+TGG 0.529147 4_2:-58833861 None:intergenic
TTTGGAGCTGGGTAAGCTGC+CGG 0.532074 4_2:-58830699 None:intergenic
TTTATGCCGGAGCATTGGTC+CGG 0.532539 4_2:-58829865 None:intergenic
GTCTGATGCTGGTCTTGGAA+TGG 0.532632 4_2:+58831676 Msa0610910:CDS
TCTGATGACCATCCACCAAA+TGG 0.532819 4_2:+58831026 Msa0610910:CDS
GGTGGAGTTGTTGAGATAGG+AGG 0.533189 4_2:-58829711 None:intergenic
CAATCTGGACGCTCCGAACA+AGG 0.534737 4_2:+58830978 Msa0610910:CDS
CACCGTGAAACACATGCCTC+CGG 0.535122 4_2:+58831328 Msa0610910:CDS
GCCACGCAGGCCAACAGCAA+TGG 0.535491 4_2:-58832562 None:intergenic
AGCTTACCCAGCTCCAAACC+CGG 0.535808 4_2:+58830704 Msa0610910:CDS
CCACCACCGTACGGAGCCAT+AGG 0.539416 4_2:-58829830 None:intergenic
ACTTACAAAGACATAATCAA+TGG 0.541553 4_2:+58833300 Msa0610910:three_prime_UTR
CATGGCATAAGGGTTATTTG+TGG 0.541794 4_2:-58829938 None:intergenic
CTTGAGACAGATGCTGAGGT+TGG 0.542841 4_2:+58830327 Msa0610910:CDS
CCTATGGCTCCGTACGGTGG+TGG 0.543458 4_2:+58829830 Msa0610910:CDS
CGCGACGAAACGGTTTATGC+CGG 0.546741 4_2:-58829878 None:intergenic
CACGTAAAAGGTTGCCACGC+AGG 0.546886 4_2:-58832575 None:intergenic
GAAGCTGCAGCCATGACTGC+AGG 0.547059 4_2:-58832540 None:intergenic
TGAACCAGTTAAGTTGTGAC+TGG 0.547702 4_2:-58829643 None:intergenic
TGTGAAGCTCTTTAGCATCA+TGG 0.550496 4_2:-58830863 None:intergenic
AATTCCCATAACCAAAGTGT+TGG 0.554129 4_2:-58830091 None:intergenic
AACTTGAACCATAAGGGTAC+CGG 0.554608 4_2:-58830145 None:intergenic
AACCATGATCAGAATGAGAC+GGG 0.555654 4_2:-58831363 None:intergenic
GTAACAGTACCACCATTTGG+TGG 0.556831 4_2:-58831038 None:intergenic
CAAGCTATAAATCTCTGCTC+CGG 0.557565 4_2:-58830436 None:intergenic
AAATAGGCTGCACTTCCTCA+AGG 0.557695 4_2:+58833023 Msa0610910:intron
GTGGAGTTGTTGAGATAGGA+GGG 0.559354 4_2:-58829710 None:intergenic
AGACACAACAGAGGAAAACA+GGG 0.563756 4_2:+58833610 Msa0610910:three_prime_UTR
CCAGCTGCTCTGAACAAGCT+AGG 0.564553 4_2:+58831269 Msa0610910:CDS
TCCGTTCAGTCCAATTCACG+TGG 0.565363 4_2:+58830570 Msa0610910:CDS
GCACCAAAATTAGAATGTCT+CGG 0.565935 4_2:-58830534 None:intergenic
ACGGATTTCTACTCTATGAT+GGG 0.566049 4_2:+58830504 Msa0610910:CDS
ATGAAATGAAAGGATAGAAG+AGG 0.566566 4_2:-58829913 None:intergenic
CCATACATAGCTATGAGAAG+TGG 0.569788 4_2:-58830114 None:intergenic
TTATCCGGCACAAAATGTGC+CGG 0.572329 4_2:+58830680 Msa0610910:CDS
CAGCTAATGGTAGCTTAGAG+TGG 0.576924 4_2:+58830037 Msa0610910:CDS
CTGTACTAAGAATGGCTGGA+TGG 0.577954 4_2:-58833082 None:intergenic
ATGCCAGAAACAGAGCTTGG+TGG 0.579731 4_2:+58831176 Msa0610910:CDS
ATTTGTGGAGATGAAATGAA+AGG 0.580978 4_2:-58829923 None:intergenic
TCGCCGGTTTCCGAAGCCAG+CGG 0.582362 4_2:+58830909 Msa0610910:CDS
CAGTACCACCATTTGGTGGA+TGG 0.585057 4_2:-58831034 None:intergenic
GGTGGTACTGTTACCAACAA+AGG 0.585850 4_2:+58831047 Msa0610910:CDS
AGTCATCATAAAAGATCTCC+GGG 0.587281 4_2:-58830394 None:intergenic
CCACAAACAGTTACTAACAA+TGG 0.587706 4_2:+58830816 Msa0610910:CDS
GAAAATTGGGTCAGTGTGCA+TGG 0.589245 4_2:-58833548 None:intergenic
TCCCGGAATCCGACGCCGAG+AGG 0.593159 4_2:+58830465 Msa0610910:CDS
TGTATTTAGTGAGAAAACAA+AGG 0.595779 4_2:+58833758 Msa0610910:three_prime_UTR
CCACGGCCGTCGAATCTCAC+CGG 0.596417 4_2:+58830417 Msa0610910:CDS
GCTATGCCAGAAACAGAGCT+TGG 0.606433 4_2:+58831173 Msa0610910:intron
TGATTAAAATTAGACCCTCT+CGG 0.610851 4_2:-58830480 None:intergenic
CCCACGTGAATTGGACTGAA+CGG 0.612758 4_2:-58830571 None:intergenic
AAGAGCTTCACATGTTTGTG+TGG 0.615015 4_2:+58830874 Msa0610910:CDS
AATAGGCTGCACTTCCTCAA+GGG 0.617237 4_2:+58833024 Msa0610910:intron
AAACCATGATCAGAATGAGA+CGG 0.622385 4_2:-58831364 None:intergenic
ACTTACACTCTTGCTCAACC+CGG 0.624193 4_2:-58830736 None:intergenic
GTTGTGACTGGACTAGGAGA+GGG 0.625409 4_2:-58829631 None:intergenic
GGAGCCATAGGCTAAAATCA+TGG 0.627873 4_2:-58829818 None:intergenic
TGTAAGAAATCGAACAGCCA+TGG 0.628792 4_2:-58832514 None:intergenic
AACCAAAGTGTGTCACATTG+TGG 0.633779 4_2:+58833373 Msa0610910:three_prime_UTR
TAGCCTATGGCTCCGTACGG+TGG 0.633812 4_2:+58829827 Msa0610910:CDS
GTGGTGGAAAATATTCTCAC+CGG 0.633995 4_2:+58829846 Msa0610910:CDS
ACGCTCCGAACAAGGTGCCA+AGG 0.639044 4_2:+58830986 Msa0610910:CDS
AGTTGTGACTGGACTAGGAG+AGG 0.639175 4_2:-58829632 None:intergenic
AGGAGGATCCAGCTCAACGG+CGG 0.640290 4_2:+58831289 Msa0610910:CDS
AATAGATAAACAATAAACAA+TGG 0.641411 4_2:-58833689 None:intergenic
CAACCCAAGATGATTGCATG+TGG 0.649541 4_2:+58832471 Msa0610910:CDS
TCTGCTCCGGTGAGATTCGA+CGG 0.650821 4_2:-58830423 None:intergenic
GACGGAGAGAGAATTTACAA+AGG 0.651237 4_2:-58829484 None:intergenic
TGTGGATTGTGCTATTAGCA+AGG 0.651881 4_2:+58833391 Msa0610910:three_prime_UTR
GCTGGCTTCGGAAACCGGCG+AGG 0.657777 4_2:-58830907 None:intergenic
ATCCAGCCATTCTTAGTACA+GGG 0.657871 4_2:+58833084 Msa0610910:CDS
GCTAGGAGGATCCAGCTCAA+CGG 0.658037 4_2:+58831286 Msa0610910:CDS
GTGTGAGAGAGAGACAGAGA+CGG 0.670555 4_2:-58829502 None:intergenic
GATGACCATCCACCAAATGG+TGG 0.673987 4_2:+58831029 Msa0610910:CDS
GACACAACAGAGGAAAACAG+GGG 0.675597 4_2:+58833611 Msa0610910:three_prime_UTR
GCTGCTCTGAACAAGCTAGG+AGG 0.688577 4_2:+58831272 Msa0610910:CDS
ACAAATGGAACAATCCCTTG+AGG 0.689122 4_2:-58833038 None:intergenic
CCGTTCAGTCCAATTCACGT+GGG 0.693338 4_2:+58830571 Msa0610910:CDS
GAGACCAAATTAGACCAATG+AGG 0.693897 4_2:-58831424 None:intergenic
TACGTAAAGTGGAACTACTG+CGG 0.698065 4_2:-58829794 None:intergenic
CGGGTCATAACACTTGCCGG+AGG 0.723150 4_2:-58831344 None:intergenic
GCATATGAGAGACACAACAG+AGG 0.730420 4_2:+58833601 Msa0610910:three_prime_UTR
CGGAGGCATGTGTTTCACGG+TGG 0.739555 4_2:-58831327 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAATTATTAAATTTTTCA+TGG - chr4_2:58831953-58831972 None:intergenic 10.0%
!!! TAATTTTGTTTAAACTAAAA+TGG + chr4_2:58832771-58832790 Msa0610910:intron 10.0%
!! ATAATCATTACAAAATTTAT+GGG - chr4_2:58832913-58832932 None:intergenic 10.0%
!! AATAATCATTACAAAATTTA+TGG - chr4_2:58832914-58832933 None:intergenic 10.0%
!!! GAGTTTTTTTTATATAAGTT+TGG + chr4_2:58831578-58831597 Msa0610910:intron 15.0%
!!! TGATTATTAATTTTGATTGT+AGG + chr4_2:58831606-58831625 Msa0610910:intron 15.0%
!!! ATTGATTTCTCTATTATTTT+AGG - chr4_2:58831647-58831666 None:intergenic 15.0%
!!! TTAGAAAATATAATGGAAAT+GGG - chr4_2:58831826-58831845 None:intergenic 15.0%
!!! ATTAGAAAATATAATGGAAA+TGG - chr4_2:58831827-58831846 None:intergenic 15.0%
!!! AATAATTTCCCATAATTTTT+GGG + chr4_2:58832851-58832870 Msa0610910:intron 15.0%
!!! TTTTTCCATTTATGAAAAAA+GGG - chr4_2:58833180-58833199 None:intergenic 15.0%
!!! ATTTTTCCATTTATGAAAAA+AGG - chr4_2:58833181-58833200 None:intergenic 15.0%
!!! TTTTGAATCTTTTATACTTT+GGG + chr4_2:58833330-58833349 Msa0610910:three_prime_UTR 15.0%
!! AATAGATAAACAATAAACAA+TGG - chr4_2:58833692-58833711 None:intergenic 15.0%
!!! ACTTAAATTAATCGATTTTG+CGG - chr4_2:58831496-58831515 None:intergenic 20.0%
!!! TTATTAATTTTGATTGTAGG+TGG + chr4_2:58831609-58831628 Msa0610910:intron 20.0%
!! AAGAATGAAATTATTGTAGA+AGG - chr4_2:58831747-58831766 None:intergenic 20.0%
!!! GAATAATTTCCCATAATTTT+TGG + chr4_2:58832850-58832869 Msa0610910:intron 20.0%
!!! ATTATTATGTGACAAGTTTT+AGG + chr4_2:58832928-58832947 Msa0610910:intron 20.0%
!!! TTATTATGTGACAAGTTTTA+GGG + chr4_2:58832929-58832948 Msa0610910:intron 20.0%
!! AAATGGAAAAATTTCATTTC+AGG + chr4_2:58833189-58833208 Msa0610910:three_prime_UTR 20.0%
!! AATGGAAAAATTTCATTTCA+GGG + chr4_2:58833190-58833209 Msa0610910:three_prime_UTR 20.0%
!!! CTTTTGAATCTTTTATACTT+TGG + chr4_2:58833329-58833348 Msa0610910:three_prime_UTR 20.0%
!!! TTAAATTTGACCTATTGATT+TGG + chr4_2:58833513-58833532 Msa0610910:three_prime_UTR 20.0%
!! TAACTGGTTCAGTTAATTAA+CGG + chr4_2:58829655-58829674 Msa0610910:five_prime_UTR 25.0%
!!! AGGGTCTAATTTTAATCATA+CGG + chr4_2:58830485-58830504 Msa0610910:CDS 25.0%
! AAAAAACTACATACCTTTGT+TGG - chr4_2:58831063-58831082 None:intergenic 25.0%
! AGTAATTCTTCTTCTTTAAC+TGG - chr4_2:58831221-58831240 None:intergenic 25.0%
! AGTTAAAGAAGAAGAATTAC+TGG + chr4_2:58831220-58831239 Msa0610910:CDS 25.0%
! AATGAAATTATTGTAGAAGG+AGG - chr4_2:58831744-58831763 None:intergenic 25.0%
! TGTTTAATGTAAAAGAGGAA+AGG - chr4_2:58831786-58831805 None:intergenic 25.0%
! AATGGTGTTTAATGTAAAAG+AGG - chr4_2:58831791-58831810 None:intergenic 25.0%
!!! AAACACATGTCAATTTGTTT+TGG - chr4_2:58831856-58831875 None:intergenic 25.0%
! TATAGATTTGAGGAAAAGAA+AGG + chr4_2:58832073-58832092 Msa0610910:intron 25.0%
! AGTAACAAACTCCAAAATAA+TGG - chr4_2:58832118-58832137 None:intergenic 25.0%
!! ACTATTTTGCAACCAAAATT+TGG + chr4_2:58832265-58832284 Msa0610910:intron 25.0%
!! ATTAGACATTTGCCAAATTT+TGG - chr4_2:58832280-58832299 None:intergenic 25.0%
! AATGTCTAATTTCACTAATC+AGG + chr4_2:58832290-58832309 Msa0610910:intron 25.0%
! AATCAGGAAAAACTTCAAAA+CGG + chr4_2:58832306-58832325 Msa0610910:intron 25.0%
! TCTATGAAATGTACAATATG+AGG + chr4_2:58832659-58832678 Msa0610910:intron 25.0%
! ATGAAAATGTTGCTGAAAAT+AGG + chr4_2:58833007-58833026 Msa0610910:intron 25.0%
!!! ATTGACCCTTTTTTCATAAA+TGG + chr4_2:58833172-58833191 Msa0610910:three_prime_UTR 25.0%
!!! TTTCATTTCAGGGTTATTTT+TGG + chr4_2:58833200-58833219 Msa0610910:three_prime_UTR 25.0%
! TTGATTATGTCTTTGTAAGT+TGG - chr4_2:58833300-58833319 None:intergenic 25.0%
! ACTTACAAAGACATAATCAA+TGG + chr4_2:58833300-58833319 Msa0610910:three_prime_UTR 25.0%
!! TAATGAAGTTCCCAAATTTT+GGG - chr4_2:58833496-58833515 None:intergenic 25.0%
!! TTAATGAAGTTCCCAAATTT+TGG - chr4_2:58833497-58833516 None:intergenic 25.0%
! TGTATTTAGTGAGAAAACAA+AGG + chr4_2:58833758-58833777 Msa0610910:three_prime_UTR 25.0%
!! TCATTTTGATGAAGGCTTTT+TGG - chr4_2:58829744-58829763 None:intergenic 30.0%
ATGAAATGAAAGGATAGAAG+AGG - chr4_2:58829916-58829935 None:intergenic 30.0%
ATTTGTGGAGATGAAATGAA+AGG - chr4_2:58829926-58829945 None:intergenic 30.0%
!!! TTGTTTTTGTTTGAGTATCG+TGG + chr4_2:58830204-58830223 Msa0610910:CDS 30.0%
TGCTTCAATTGTTTCCTTTA+AGG + chr4_2:58830266-58830285 Msa0610910:CDS 30.0%
AACATCAGAATCAACCTTAA+AGG - chr4_2:58830283-58830302 None:intergenic 30.0%
TGATTAAAATTAGACCCTCT+CGG - chr4_2:58830483-58830502 None:intergenic 30.0%
! TCCGAAATTTGGATTTTATC+CGG + chr4_2:58830665-58830684 Msa0610910:CDS 30.0%
TTATTGTAGAAGGAGGAATT+TGG - chr4_2:58831737-58831756 None:intergenic 30.0%
! AAATATAATGGAAATGGGAG+TGG - chr4_2:58831821-58831840 None:intergenic 30.0%
ACAATCACAAAACAATGAAG+AGG + chr4_2:58831983-58832002 Msa0610910:intron 30.0%
CAATCACAAAACAATGAAGA+GGG + chr4_2:58831984-58832003 Msa0610910:intron 30.0%
CAATGGGAATTATAGATTTG+AGG + chr4_2:58832063-58832082 Msa0610910:intron 30.0%
!! AAACTCCAAAATAATGGACA+CGG - chr4_2:58832112-58832131 None:intergenic 30.0%
!!! TTTTTTATCTTGTACCCTCT+TGG + chr4_2:58832388-58832407 Msa0610910:intron 30.0%
!! GTTTTTGTTTGTATATGCAC+AGG + chr4_2:58832432-58832451 Msa0610910:intron 30.0%
! TATATGCACAGGTTTGTTTA+TGG + chr4_2:58832443-58832462 Msa0610910:intron 30.0%
!!! GCTTATTTTTTAAACCATCG+CGG - chr4_2:58832750-58832769 None:intergenic 30.0%
CTAGTGTTCCCAAAAATTAT+GGG - chr4_2:58832862-58832881 None:intergenic 30.0%
ACTAGTGTTCCCAAAAATTA+TGG - chr4_2:58832863-58832882 None:intergenic 30.0%
ATGTAGTAGACTAGAGTAAT+TGG - chr4_2:58833242-58833261 None:intergenic 30.0%
CTAGTCTACTACATATTACT+TGG + chr4_2:58833248-58833267 Msa0610910:three_prime_UTR 30.0%
!!! GGATCTTCACTGTTTTTTTA+AGG - chr4_2:58833463-58833482 None:intergenic 30.0%
TTCCAAGTTTCCCAAAATTT+GGG + chr4_2:58833483-58833502 Msa0610910:three_prime_UTR 30.0%
AGAATTTGAGCCAAATCAAT+AGG - chr4_2:58833526-58833545 None:intergenic 30.0%
TTTCTCAGCTCTTGAAAATT+GGG - chr4_2:58833564-58833583 None:intergenic 30.0%
! TTTTCTCAGCTCTTGAAAAT+TGG - chr4_2:58833565-58833584 None:intergenic 30.0%
!! ATTTTCAAGAGCTGAGAAAA+AGG + chr4_2:58833565-58833584 Msa0610910:three_prime_UTR 30.0%
ATAAAATTCGTGTTCACCAT+GGG - chr4_2:58833863-58833882 None:intergenic 30.0%
GTGTACTTTCGTTTCTGTTA+AGG - chr4_2:58829612-58829631 None:intergenic 35.0%
AGGGTAAAGTTGGAAGAAAA+AGG - chr4_2:58829694-58829713 None:intergenic 35.0%
!! TGATGAAGGCTTTTTGGTAA+TGG - chr4_2:58829738-58829757 None:intergenic 35.0%
!! CCAGGTTATCATTTTGATGA+AGG - chr4_2:58829752-58829771 None:intergenic 35.0%
CCTTCATCAAAATGATAACC+TGG + chr4_2:58829749-58829768 Msa0610910:exon 35.0%
AAAATCATGGCTACGTAAAG+TGG - chr4_2:58829808-58829827 None:intergenic 35.0%
ACCTATAGTTCATGGCATAA+GGG - chr4_2:58829951-58829970 None:intergenic 35.0%
AACCTATAGTTCATGGCATA+AGG - chr4_2:58829952-58829971 None:intergenic 35.0%
TGCTATGAACCTATAGTTCA+TGG - chr4_2:58829959-58829978 None:intergenic 35.0%
TGCTCTTTGCACTTACAATT+TGG + chr4_2:58830004-58830023 Msa0610910:CDS 35.0%
TGGACTAATTTCACAGCTAA+TGG + chr4_2:58830024-58830043 Msa0610910:CDS 35.0%
TTCAACATTACCCAACACTT+TGG + chr4_2:58830080-58830099 Msa0610910:CDS 35.0%
ATTACCCAACACTTTGGTTA+TGG + chr4_2:58830086-58830105 Msa0610910:CDS 35.0%
TTACCCAACACTTTGGTTAT+GGG + chr4_2:58830087-58830106 Msa0610910:CDS 35.0%
! ATTCCCATAACCAAAGTGTT+GGG - chr4_2:58830093-58830112 None:intergenic 35.0%
AATTCCCATAACCAAAGTGT+TGG - chr4_2:58830094-58830113 None:intergenic 35.0%
GCTATGTATGGTGAATATTC+CGG + chr4_2:58830126-58830145 Msa0610910:CDS 35.0%
AACCACAACTTGAACCATAA+GGG - chr4_2:58830154-58830173 None:intergenic 35.0%
TGGTTCTTCAGTGTATCATT+TGG + chr4_2:58830169-58830188 Msa0610910:CDS 35.0%
!! TGGTGCTAAGCTTTTGATTA+TGG + chr4_2:58830224-58830243 Msa0610910:CDS 35.0%
AGTCATCATAAAAGATCTCC+GGG - chr4_2:58830397-58830416 None:intergenic 35.0%
GAGTCATCATAAAAGATCTC+CGG - chr4_2:58830398-58830417 None:intergenic 35.0%
! GATCTTTTATGATGACTCCA+CGG + chr4_2:58830400-58830419 Msa0610910:CDS 35.0%
TTTATAGCTTGAGTTCTTCC+CGG + chr4_2:58830448-58830467 Msa0610910:CDS 35.0%
TACGGATTTCTACTCTATGA+TGG + chr4_2:58830503-58830522 Msa0610910:CDS 35.0%
ACGGATTTCTACTCTATGAT+GGG + chr4_2:58830504-58830523 Msa0610910:CDS 35.0%
GCACCAAAATTAGAATGTCT+CGG - chr4_2:58830537-58830556 None:intergenic 35.0%
GCCGGATAAAATCCAAATTT+CGG - chr4_2:58830669-58830688 None:intergenic 35.0%
CCATTGTTAGTAACTGTTTG+TGG - chr4_2:58830819-58830838 None:intergenic 35.0%
CCACAAACAGTTACTAACAA+TGG + chr4_2:58830816-58830835 Msa0610910:CDS 35.0%
AACCAACATTCTAATCTCCT+TGG - chr4_2:58831006-58831025 None:intergenic 35.0%
AGAATTACTGGTAGAAGATG+AGG + chr4_2:58831232-58831251 Msa0610910:CDS 35.0%
TAGAAGATGAGGTAGAGAAA+GGG + chr4_2:58831243-58831262 Msa0610910:CDS 35.0%
AAACCATGATCAGAATGAGA+CGG - chr4_2:58831367-58831386 None:intergenic 35.0%
AGGAAAGGAATTGCAAAGAA+AGG - chr4_2:58831771-58831790 None:intergenic 35.0%
! AAACAATGAAGAGGGTACAA+TGG + chr4_2:58831992-58832011 Msa0610910:intron 35.0%
GAATGAATGTGATGGTAACA+TGG + chr4_2:58832020-58832039 Msa0610910:intron 35.0%
TGGTATGATGAGTCTATCTA+TGG + chr4_2:58832040-58832059 Msa0610910:intron 35.0%
ATGAGTCTATCTATGGCAAT+GGG + chr4_2:58832047-58832066 Msa0610910:intron 35.0%
! AAAGACCGTGTCCATTATTT+TGG + chr4_2:58832104-58832123 Msa0610910:intron 35.0%
ACGTTATTGTTCAGCAAACA+TGG - chr4_2:58832163-58832182 None:intergenic 35.0%
! ATGTTTGCTGAACAATAACG+TGG + chr4_2:58832162-58832181 Msa0610910:intron 35.0%
! TGTTTGCTGAACAATAACGT+GGG + chr4_2:58832163-58832182 Msa0610910:intron 35.0%
GATAACGTGAATGTAAAGTG+TGG + chr4_2:58832348-58832367 Msa0610910:intron 35.0%
TGTACCCTCTTGGATAAAAA+TGG + chr4_2:58832398-58832417 Msa0610910:intron 35.0%
TTTCCACATGCAATCATCTT+GGG - chr4_2:58832477-58832496 None:intergenic 35.0%
GAACAATAGCTACACGTAAA+AGG - chr4_2:58832590-58832609 None:intergenic 35.0%
TTTACGTGTAGCTATTGTTC+AGG + chr4_2:58832590-58832609 Msa0610910:CDS 35.0%
ACATGATAGAGTGGAAATCA+AGG - chr4_2:58832627-58832646 None:intergenic 35.0%
GATTTCCACTCTATCATGTT+AGG + chr4_2:58832628-58832647 Msa0610910:intron 35.0%
!!! TATGTGACAAGTTTTAGGGA+TGG + chr4_2:58832933-58832952 Msa0610910:intron 35.0%
! TGTTCCATTTGTGTTTGCTA+AGG + chr4_2:58833049-58833068 Msa0610910:CDS 35.0%
TACTCCTTAGCAAACACAAA+TGG - chr4_2:58833056-58833075 None:intergenic 35.0%
CAATTACCCTGTACTAAGAA+TGG - chr4_2:58833093-58833112 None:intergenic 35.0%
! AGCAAGGATGATGATTTTTC+TGG + chr4_2:58833407-58833426 Msa0610910:three_prime_UTR 35.0%
!!! GTTTTTTTAAGGATCCTAGC+TGG - chr4_2:58833452-58833471 None:intergenic 35.0%
!! CAAATTTTGGGAAACTTGGA+AGG - chr4_2:58833484-58833503 None:intergenic 35.0%
CTTCCAAGTTTCCCAAAATT+TGG + chr4_2:58833482-58833501 Msa0610910:three_prime_UTR 35.0%
!! TTCCCAAATTTTGGGAAACT+TGG - chr4_2:58833488-58833507 None:intergenic 35.0%
CATAAAATTCGTGTTCACCA+TGG - chr4_2:58833864-58833883 None:intergenic 35.0%
GACGGAGAGAGAATTTACAA+AGG - chr4_2:58829487-58829506 None:intergenic 40.0%
! AGTTAAGTTGTGACTGGACT+AGG - chr4_2:58829640-58829659 None:intergenic 40.0%
TAGTCCAGTCACAACTTAAC+TGG + chr4_2:58829639-58829658 Msa0610910:five_prime_UTR 40.0%
! TGAACCAGTTAAGTTGTGAC+TGG - chr4_2:58829646-58829665 None:intergenic 40.0%
TTGAGATAGGAGGGTAAAGT+TGG - chr4_2:58829704-58829723 None:intergenic 40.0%
!!! TGAAGGCTTTTTGGTAATGG+CGG - chr4_2:58829735-58829754 None:intergenic 40.0%
TACGTAAAGTGGAACTACTG+CGG - chr4_2:58829797-58829816 None:intergenic 40.0%
!! GTAGCCATGATTTTAGCCTA+TGG + chr4_2:58829814-58829833 Msa0610910:CDS 40.0%
! GAATATTTTCCACCACCGTA+CGG - chr4_2:58829842-58829861 None:intergenic 40.0%
! GTGGTGGAAAATATTCTCAC+CGG + chr4_2:58829846-58829865 Msa0610910:CDS 40.0%
CATGGCATAAGGGTTATTTG+TGG - chr4_2:58829941-58829960 None:intergenic 40.0%
ACCCTTATGCCATGAACTAT+AGG + chr4_2:58829947-58829966 Msa0610910:CDS 40.0%
CCATACATAGCTATGAGAAG+TGG - chr4_2:58830117-58830136 None:intergenic 40.0%
CCACTTCTCATAGCTATGTA+TGG + chr4_2:58830114-58830133 Msa0610910:CDS 40.0%
TGAATATTCCGGTACCCTTA+TGG + chr4_2:58830137-58830156 Msa0610910:CDS 40.0%
! AACTTGAACCATAAGGGTAC+CGG - chr4_2:58830148-58830167 None:intergenic 40.0%
!! TACCCTTATGGTTCAAGTTG+TGG + chr4_2:58830149-58830168 Msa0610910:CDS 40.0%
GAACCACAACTTGAACCATA+AGG - chr4_2:58830155-58830174 None:intergenic 40.0%
ACAATTGAAGCAGCAGTTTC+AGG - chr4_2:58830258-58830277 None:intergenic 40.0%
!! TCTGATGTTGTTTCGCTTGA+TGG + chr4_2:58830294-58830313 Msa0610910:CDS 40.0%
! TTTTCTTGAGACAGATGCTG+AGG + chr4_2:58830323-58830342 Msa0610910:CDS 40.0%
TCAGAAAATCAAACGCTTCC+CGG + chr4_2:58830376-58830395 Msa0610910:CDS 40.0%
CAAGCTATAAATCTCTGCTC+CGG - chr4_2:58830439-58830458 None:intergenic 40.0%
! GCTCCGAGACATTCTAATTT+TGG + chr4_2:58830531-58830550 Msa0610910:CDS 40.0%
TGTGAAGCTCTTTAGCATCA+TGG - chr4_2:58830866-58830885 None:intergenic 40.0%
AAGAGCTTCACATGTTTGTG+TGG + chr4_2:58830874-58830893 Msa0610910:CDS 40.0%
TGCCAAGGAGATTAGAATGT+TGG + chr4_2:58831001-58831020 Msa0610910:CDS 40.0%
! TTGGTAACAGTACCACCATT+TGG - chr4_2:58831044-58831063 None:intergenic 40.0%
GTAGAAGATGAGGTAGAGAA+AGG + chr4_2:58831242-58831261 Msa0610910:CDS 40.0%
AGAAGATGAGGTAGAGAAAG+GGG + chr4_2:58831244-58831263 Msa0610910:CDS 40.0%
AACCATGATCAGAATGAGAC+GGG - chr4_2:58831366-58831385 None:intergenic 40.0%
GTCTCATTCTGATCATGGTT+TGG + chr4_2:58831366-58831385 Msa0610910:CDS 40.0%
GAGACCAAATTAGACCAATG+AGG - chr4_2:58831427-58831446 None:intergenic 40.0%
TGGTCTAATTTGGTCTCTTG+TGG + chr4_2:58831430-58831449 Msa0610910:CDS 40.0%
TTTGGTCTCTTGTGGCATTT+AGG + chr4_2:58831438-58831457 Msa0610910:CDS 40.0%
GGAATGGCTATGTTCAGTTT+AGG + chr4_2:58831692-58831711 Msa0610910:CDS 40.0%
AATGGGAGTGGAAGCAATAA+TGG - chr4_2:58831809-58831828 None:intergenic 40.0%
GATGAGTCTATCTATGGCAA+TGG + chr4_2:58832046-58832065 Msa0610910:intron 40.0%
! GTTTGCTGAACAATAACGTG+GGG + chr4_2:58832164-58832183 Msa0610910:intron 40.0%
AAATATCAGACCCCACATGT+CGG - chr4_2:58832215-58832234 None:intergenic 40.0%
!! TGTGGGGTCTGATATTTTAG+CGG + chr4_2:58832218-58832237 Msa0610910:intron 40.0%
ACCCTCTTGGATAAAAATGG+AGG + chr4_2:58832401-58832420 Msa0610910:intron 40.0%
!! CCCTCCATTTTTATCCAAGA+GGG - chr4_2:58832405-58832424 None:intergenic 40.0%
CCCTCTTGGATAAAAATGGA+GGG + chr4_2:58832402-58832421 Msa0610910:intron 40.0%
!! ACCCTCCATTTTTATCCAAG+AGG - chr4_2:58832406-58832425 None:intergenic 40.0%
GTTTCCACATGCAATCATCT+TGG - chr4_2:58832478-58832497 None:intergenic 40.0%
TGTAAGAAATCGAACAGCCA+TGG - chr4_2:58832517-58832536 None:intergenic 40.0%
ATGGCTGTTCGATTTCTTAC+AGG + chr4_2:58832516-58832535 Msa0610910:CDS 40.0%
GTTTGCCTAACATGATAGAG+TGG - chr4_2:58832636-58832655 None:intergenic 40.0%
CCTAACTGTGTAAATACGTG+TGG - chr4_2:58832723-58832742 None:intergenic 40.0%
CCACACGTATTTACACAGTT+AGG + chr4_2:58832720-58832739 Msa0610910:intron 40.0%
AATGGTCGAGCTTGAGATAT+CGG + chr4_2:58832789-58832808 Msa0610910:intron 40.0%
ACAAATGGAACAATCCCTTG+AGG - chr4_2:58833041-58833060 None:intergenic 40.0%
ATCCAGCCATTCTTAGTACA+GGG + chr4_2:58833084-58833103 Msa0610910:CDS 40.0%
AACCAAAGTGTGTCACATTG+TGG + chr4_2:58833373-58833392 Msa0610910:three_prime_UTR 40.0%
ATCCACAATGTGACACACTT+TGG - chr4_2:58833378-58833397 None:intergenic 40.0%
! TGTGGATTGTGCTATTAGCA+AGG + chr4_2:58833391-58833410 Msa0610910:three_prime_UTR 40.0%
GAGAACAAAAATCACCAGCT+AGG + chr4_2:58833435-58833454 Msa0610910:three_prime_UTR 40.0%
AGACACAACAGAGGAAAACA+GGG + chr4_2:58833610-58833629 Msa0610910:three_prime_UTR 40.0%
TGTAAGCAACGTGTCAATCT+TGG + chr4_2:58833806-58833825 Msa0610910:three_prime_UTR 40.0%
! TCACCATGGGTTGCATTAAA+AGG - chr4_2:58833850-58833869 None:intergenic 40.0%
GTGGAGTTGTTGAGATAGGA+GGG - chr4_2:58829713-58829732 None:intergenic 45.0%
GGAGCCATAGGCTAAAATCA+TGG - chr4_2:58829821-58829840 None:intergenic 45.0%
! TTTTAGCCTATGGCTCCGTA+CGG + chr4_2:58829824-58829843 Msa0610910:CDS 45.0%
CAGCTAATGGTAGCTTAGAG+TGG + chr4_2:58830037-58830056 Msa0610910:CDS 45.0%
AAGTTTGACGGTCTTGGAGT+CGG - chr4_2:58830597-58830616 None:intergenic 45.0%
TCTTCGAAGTTTGACGGTCT+TGG - chr4_2:58830603-58830622 None:intergenic 45.0%
GGGTTCTCTTCGAAGTTTGA+CGG - chr4_2:58830609-58830628 None:intergenic 45.0%
GCTGTGAACTCTCCGAAATT+TGG + chr4_2:58830654-58830673 Msa0610910:CDS 45.0%
TTATCCGGCACAAAATGTGC+CGG + chr4_2:58830680-58830699 Msa0610910:CDS 45.0%
ACTTACACTCTTGCTCAACC+CGG - chr4_2:58830739-58830758 None:intergenic 45.0%
AATCTCCTTGGCACCTTGTT+CGG - chr4_2:58830994-58831013 None:intergenic 45.0%
TCTGATGACCATCCACCAAA+TGG + chr4_2:58831026-58831045 Msa0610910:CDS 45.0%
GTAACAGTACCACCATTTGG+TGG - chr4_2:58831041-58831060 None:intergenic 45.0%
GGTGGTACTGTTACCAACAA+AGG + chr4_2:58831047-58831066 Msa0610910:CDS 45.0%
! TGGAGTACGTGTTTGGGTTA+CGG - chr4_2:58831403-58831422 None:intergenic 45.0%
CCAAATTAGACCAATGAGGC+TGG - chr4_2:58831423-58831442 None:intergenic 45.0%
! CCAGCCTCATTGGTCTAATT+TGG + chr4_2:58831420-58831439 Msa0610910:CDS 45.0%
ATCTCCATACTGTCTGATGC+TGG + chr4_2:58831665-58831684 Msa0610910:CDS 45.0%
AAGACCAGCATCAGACAGTA+TGG - chr4_2:58831672-58831691 None:intergenic 45.0%
! ATACTGTCTGATGCTGGTCT+TGG + chr4_2:58831671-58831690 Msa0610910:CDS 45.0%
TGGCAGTGGAATGAATGTGA+TGG + chr4_2:58832012-58832031 Msa0610910:intron 45.0%
GTTCAGCAAACATGGTCACT+TGG - chr4_2:58832155-58832174 None:intergenic 45.0%
AATATCAGACCCCACATGTC+GGG - chr4_2:58832214-58832233 None:intergenic 45.0%
!! ATTTTAGCGGTCCACGACTA+TGG + chr4_2:58832231-58832250 Msa0610910:intron 45.0%
CAACCCAAGATGATTGCATG+TGG + chr4_2:58832471-58832490 Msa0610910:CDS 45.0%
CTCAGTTGCTTCATTTGCCA+TGG + chr4_2:58832497-58832516 Msa0610910:CDS 45.0%
! GTAAGAGACTTCTGGGAATG+TGG - chr4_2:58832701-58832720 None:intergenic 45.0%
ACGTGTGGTAAGAGACTTCT+GGG - chr4_2:58832708-58832727 None:intergenic 45.0%
TACGTGTGGTAAGAGACTTC+TGG - chr4_2:58832709-58832728 None:intergenic 45.0%
CTTGAGATATCGGATTGTCG+CGG + chr4_2:58832799-58832818 Msa0610910:intron 45.0%
GCACGTATTCATGCAGTTAG+TGG - chr4_2:58832827-58832846 None:intergenic 45.0%
AAATAGGCTGCACTTCCTCA+AGG + chr4_2:58833023-58833042 Msa0610910:intron 45.0%
AATAGGCTGCACTTCCTCAA+GGG + chr4_2:58833024-58833043 Msa0610910:intron 45.0%
CTGTACTAAGAATGGCTGGA+TGG - chr4_2:58833085-58833104 None:intergenic 45.0%
CATCCAGCCATTCTTAGTAC+AGG + chr4_2:58833083-58833102 Msa0610910:CDS 45.0%
TACCCTGTACTAAGAATGGC+TGG - chr4_2:58833089-58833108 None:intergenic 45.0%
! TGGGAGTATGCAAGCATTCT+TGG + chr4_2:58833349-58833368 Msa0610910:three_prime_UTR 45.0%
GAAAATTGGGTCAGTGTGCA+TGG - chr4_2:58833551-58833570 None:intergenic 45.0%
GCATATGAGAGACACAACAG+AGG + chr4_2:58833601-58833620 Msa0610910:three_prime_UTR 45.0%
GAGACACAACAGAGGAAAAC+AGG + chr4_2:58833609-58833628 Msa0610910:three_prime_UTR 45.0%
GACACAACAGAGGAAAACAG+GGG + chr4_2:58833611-58833630 Msa0610910:three_prime_UTR 45.0%
! GCTCCTTTTAATGCAACCCA+TGG + chr4_2:58833844-58833863 Msa0610910:three_prime_UTR 45.0%
!!! TTTTATATTAGAAAATATAA+TGG - chr4_2:58831833-58831852 None:intergenic 5.0%
GTGTGAGAGAGAGACAGAGA+CGG - chr4_2:58829505-58829524 None:intergenic 50.0%
! GTTGTGACTGGACTAGGAGA+GGG - chr4_2:58829634-58829653 None:intergenic 50.0%
! AGTTGTGACTGGACTAGGAG+AGG - chr4_2:58829635-58829654 None:intergenic 50.0%
GGTGGAGTTGTTGAGATAGG+AGG - chr4_2:58829714-58829733 None:intergenic 50.0%
!!! AGGCTTTTTGGTAATGGCGG+TGG - chr4_2:58829732-58829751 None:intergenic 50.0%
AACTGTGTAGAGATCGTGCC+AGG - chr4_2:58829770-58829789 None:intergenic 50.0%
!! TTTATGCCGGAGCATTGGTC+CGG - chr4_2:58829868-58829887 None:intergenic 50.0%
AACGGTTTATGCCGGAGCAT+TGG - chr4_2:58829873-58829892 None:intergenic 50.0%
CTGCGAAAATCGCGACGAAA+CGG - chr4_2:58829891-58829910 None:intergenic 50.0%
CTTGAGACAGATGCTGAGGT+TGG + chr4_2:58830327-58830346 Msa0610910:CDS 50.0%
!! GATGCTGAGGTTGGTGATGA+TGG + chr4_2:58830336-58830355 Msa0610910:CDS 50.0%
AAATTAGACCCTCTCGGCGT+CGG - chr4_2:58830477-58830496 None:intergenic 50.0%
TCCGTTCAGTCCAATTCACG+TGG + chr4_2:58830570-58830589 Msa0610910:CDS 50.0%
CCCACGTGAATTGGACTGAA+CGG - chr4_2:58830574-58830593 None:intergenic 50.0%
CCGTTCAGTCCAATTCACGT+GGG + chr4_2:58830571-58830590 Msa0610910:CDS 50.0%
! AGAATTCCGGGTTTGGAGCT+GGG - chr4_2:58830713-58830732 None:intergenic 50.0%
CCAAACCCGGAATTCTCTTC+CGG + chr4_2:58830717-58830736 Msa0610910:CDS 50.0%
CAAACCCGGAATTCTCTTCC+GGG + chr4_2:58830718-58830737 Msa0610910:CDS 50.0%
TCAACCCGGAAGAGAATTCC+GGG - chr4_2:58830725-58830744 None:intergenic 50.0%
CTCAACCCGGAAGAGAATTC+CGG - chr4_2:58830726-58830745 None:intergenic 50.0%
! TACGGAGCGTCTGATCAATC+TGG + chr4_2:58830963-58830982 Msa0610910:CDS 50.0%
GATGACCATCCACCAAATGG+TGG + chr4_2:58831029-58831048 Msa0610910:CDS 50.0%
! CAGTACCACCATTTGGTGGA+TGG - chr4_2:58831037-58831056 None:intergenic 50.0%
GCTATGCCAGAAACAGAGCT+TGG + chr4_2:58831173-58831192 Msa0610910:intron 50.0%
ATGCCAGAAACAGAGCTTGG+TGG + chr4_2:58831176-58831195 Msa0610910:CDS 50.0%
ACTCCACCAAGCTCTGTTTC+TGG - chr4_2:58831182-58831201 None:intergenic 50.0%
TGTGTTTCACGGTGGCTGTT+GGG - chr4_2:58831322-58831341 None:intergenic 50.0%
ATGTGTTTCACGGTGGCTGT+TGG - chr4_2:58831323-58831342 None:intergenic 50.0%
AGACGGGTCATAACACTTGC+CGG - chr4_2:58831350-58831369 None:intergenic 50.0%
GACCCGTCTCATTCTGATCA+TGG + chr4_2:58831361-58831380 Msa0610910:CDS 50.0%
TGAGGCTGGAGTACGTGTTT+GGG - chr4_2:58831409-58831428 None:intergenic 50.0%
ATGAGGCTGGAGTACGTGTT+TGG - chr4_2:58831410-58831429 None:intergenic 50.0%
AACACGTACTCCAGCCTCAT+TGG + chr4_2:58831410-58831429 Msa0610910:CDS 50.0%
!! GTCTGATGCTGGTCTTGGAA+TGG + chr4_2:58831676-58831695 Msa0610910:CDS 50.0%
! TGAAGAGGGTACAATGGCAG+TGG + chr4_2:58831998-58832017 Msa0610910:intron 50.0%
ATATCAGACCCCACATGTCG+GGG - chr4_2:58832213-58832232 None:intergenic 50.0%
ACATGTCCCTACCATAGTCG+TGG - chr4_2:58832245-58832264 None:intergenic 50.0%
TCTTACAGGTCCTGCAGTCA+TGG + chr4_2:58832530-58832549 Msa0610910:CDS 50.0%
GGCGGTGGAGTTGTTGAGAT+AGG - chr4_2:58829717-58829736 None:intergenic 55.0%
TTCTCACCGGACCAATGCTC+CGG + chr4_2:58829859-58829878 Msa0610910:CDS 55.0%
CGCGACGAAACGGTTTATGC+CGG - chr4_2:58829881-58829900 None:intergenic 55.0%
TCTGCTCCGGTGAGATTCGA+CGG - chr4_2:58830426-58830445 None:intergenic 55.0%
! TTTGGAGCTGGGTAAGCTGC+CGG - chr4_2:58830702-58830721 None:intergenic 55.0%
AGCTTACCCAGCTCCAAACC+CGG + chr4_2:58830704-58830723 Msa0610910:CDS 55.0%
! GAGAATTCCGGGTTTGGAGC+TGG - chr4_2:58830714-58830733 None:intergenic 55.0%
CCGGAAGAGAATTCCGGGTT+TGG - chr4_2:58830720-58830739 None:intergenic 55.0%
!! GGCAGTGGTGCTGCTGATTA+CGG + chr4_2:58830945-58830964 Msa0610910:CDS 55.0%
CAATCTGGACGCTCCGAACA+AGG + chr4_2:58830978-58830997 Msa0610910:CDS 55.0%
!! CCTAGCTTGTTCAGAGCAGC+TGG - chr4_2:58831272-58831291 None:intergenic 55.0%
! CCAGCTGCTCTGAACAAGCT+AGG + chr4_2:58831269-58831288 Msa0610910:CDS 55.0%
! GCTGCTCTGAACAAGCTAGG+AGG + chr4_2:58831272-58831291 Msa0610910:CDS 55.0%
GCTAGGAGGATCCAGCTCAA+CGG + chr4_2:58831286-58831305 Msa0610910:CDS 55.0%
CACCGTGAAACACATGCCTC+CGG + chr4_2:58831328-58831347 Msa0610910:CDS 55.0%
! TGCCGGAGGCATGTGTTTCA+CGG - chr4_2:58831333-58831352 None:intergenic 55.0%
AGTGCAATGTCCCCGACATG+TGG + chr4_2:58832200-58832219 Msa0610910:intron 55.0%
GTGCAATGTCCCCGACATGT+GGG + chr4_2:58832201-58832220 Msa0610910:intron 55.0%
TGCAATGTCCCCGACATGTG+GGG + chr4_2:58832202-58832221 Msa0610910:intron 55.0%
TAGCGGTCCACGACTATGGT+AGG + chr4_2:58832235-58832254 Msa0610910:intron 55.0%
AGCGGTCCACGACTATGGTA+GGG + chr4_2:58832236-58832255 Msa0610910:intron 55.0%
GCTGCAGCTTCCATTGCTGT+TGG + chr4_2:58832552-58832571 Msa0610910:CDS 55.0%
CACGTAAAAGGTTGCCACGC+AGG - chr4_2:58832578-58832597 None:intergenic 55.0%
CACAGTTAGGAGATCCGCGA+TGG + chr4_2:58832733-58832752 Msa0610910:intron 55.0%
TAGCCTATGGCTCCGTACGG+TGG + chr4_2:58829827-58829846 Msa0610910:CDS 60.0%
TGGAGTCGGCCCACGTGAAT+TGG - chr4_2:58830583-58830602 None:intergenic 60.0%
! GCTGCCGGCACATTTTGTGC+CGG - chr4_2:58830687-58830706 None:intergenic 60.0%
!! GACTTGAAGCCCGCTGGCTT+CGG - chr4_2:58830922-58830941 None:intergenic 60.0%
! GCCAGCGGGCTTCAAGTCTT+CGG + chr4_2:58830924-58830943 Msa0610910:CDS 60.0%
GGGCTTCAAGTCTTCGGCAG+TGG + chr4_2:58830930-58830949 Msa0610910:CDS 60.0%
! ACGCTCCGAACAAGGTGCCA+AGG + chr4_2:58830986-58831005 Msa0610910:CDS 60.0%
AGGAGGATCCAGCTCAACGG+CGG + chr4_2:58831289-58831308 Msa0610910:CDS 60.0%
! CGGAGGCATGTGTTTCACGG+TGG - chr4_2:58831330-58831349 None:intergenic 60.0%
CGGGTCATAACACTTGCCGG+AGG - chr4_2:58831347-58831366 None:intergenic 60.0%
GAAGCTGCAGCCATGACTGC+AGG - chr4_2:58832543-58832562 None:intergenic 60.0%
! TCCATTGCTGTTGGCCTGCG+TGG + chr4_2:58832561-58832580 Msa0610910:CDS 60.0%
CCACCACCGTACGGAGCCAT+AGG - chr4_2:58829833-58829852 None:intergenic 65.0%
CCTATGGCTCCGTACGGTGG+TGG + chr4_2:58829830-58829849 Msa0610910:CDS 65.0%
CCACGGCCGTCGAATCTCAC+CGG + chr4_2:58830417-58830436 Msa0610910:CDS 65.0%
! ACCCTCTCGGCGTCGGATTC+CGG - chr4_2:58830470-58830489 None:intergenic 65.0%
! GTGGAGCTCTAGTGCCTCGC+CGG + chr4_2:58830893-58830912 Msa0610910:CDS 65.0%
!! TCGCCGGTTTCCGAAGCCAG+CGG + chr4_2:58830909-58830928 Msa0610910:CDS 65.0%
!! AGCCCGCTGGCTTCGGAAAC+CGG - chr4_2:58830915-58830934 None:intergenic 65.0%
GCCGAAGACTTGAAGCCCGC+TGG - chr4_2:58830928-58830947 None:intergenic 65.0%
GTGTAGCTCCGCCGTTGAGC+TGG - chr4_2:58831300-58831319 None:intergenic 65.0%
GCCACGCAGGCCAACAGCAA+TGG - chr4_2:58832565-58832584 None:intergenic 65.0%
CCGGTGAGATTCGACGGCCG+TGG - chr4_2:58830420-58830439 None:intergenic 70.0%
TCCCGGAATCCGACGCCGAG+AGG + chr4_2:58830465-58830484 Msa0610910:CDS 70.0%
! CCCTCTCGGCGTCGGATTCC+GGG - chr4_2:58830469-58830488 None:intergenic 70.0%
CCCGGAATCCGACGCCGAGA+GGG + chr4_2:58830466-58830485 Msa0610910:CDS 70.0%
CCGCTGTTGCAGCTGGCGCA+GGG - chr4_2:58830629-58830648 None:intergenic 70.0%
CCCTGCGCCAGCTGCAACAG+CGG + chr4_2:58830626-58830645 Msa0610910:CDS 70.0%
ACCGCTGTTGCAGCTGGCGC+AGG - chr4_2:58830630-58830649 None:intergenic 70.0%
GCCAGCTGCAACAGCGGTGC+AGG + chr4_2:58830632-58830651 Msa0610910:CDS 70.0%
GCCTGCACCGCTGTTGCAGC+TGG - chr4_2:58830636-58830655 None:intergenic 70.0%
! GCTGGCTTCGGAAACCGGCG+AGG - chr4_2:58830910-58830929 None:intergenic 70.0%
!! CGCCGGTTTCCGAAGCCAGC+GGG + chr4_2:58830910-58830929 Msa0610910:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 58829455 58833924 58829455 ID=Msa0610910;Name=Msa0610910
chr4_2 mRNA 58829455 58833924 58829455 ID=Msa0610910-mRNA-1;Parent=Msa0610910;Name=Msa0610910-mRNA-1;_AED=0.09;_eAED=0.09;_QI=305|1|1|1|1|1|5|815|639
chr4_2 exon 58829455 58831068 58829455 ID=Msa0610910-mRNA-1:exon:15519;Parent=Msa0610910-mRNA-1
chr4_2 exon 58831174 58831459 58831174 ID=Msa0610910-mRNA-1:exon:15520;Parent=Msa0610910-mRNA-1
chr4_2 exon 58831628 58831713 58831628 ID=Msa0610910-mRNA-1:exon:15521;Parent=Msa0610910-mRNA-1
chr4_2 exon 58832454 58832611 58832454 ID=Msa0610910-mRNA-1:exon:15522;Parent=Msa0610910-mRNA-1
chr4_2 exon 58833029 58833924 58833029 ID=Msa0610910-mRNA-1:exon:15523;Parent=Msa0610910-mRNA-1
chr4_2 five_prime_UTR 58829455 58829759 58829455 ID=Msa0610910-mRNA-1:five_prime_utr;Parent=Msa0610910-mRNA-1
chr4_2 CDS 58829760 58831068 58829760 ID=Msa0610910-mRNA-1:cds;Parent=Msa0610910-mRNA-1
chr4_2 CDS 58831174 58831459 58831174 ID=Msa0610910-mRNA-1:cds;Parent=Msa0610910-mRNA-1
chr4_2 CDS 58831628 58831713 58831628 ID=Msa0610910-mRNA-1:cds;Parent=Msa0610910-mRNA-1
chr4_2 CDS 58832454 58832611 58832454 ID=Msa0610910-mRNA-1:cds;Parent=Msa0610910-mRNA-1
chr4_2 CDS 58833029 58833109 58833029 ID=Msa0610910-mRNA-1:cds;Parent=Msa0610910-mRNA-1
chr4_2 three_prime_UTR 58833110 58833924 58833110 ID=Msa0610910-mRNA-1:three_prime_utr;Parent=Msa0610910-mRNA-1
Gene Sequence

>Msa0610910

ATGATAACCTGGCACGATCTCTACACAGTTTTAACCGCAGTAGTTCCACTTTACGTAGCCATGATTTTAGCCTATGGCTCCGTACGGTGGTGGAAAATATTCTCACCGGACCAATGCTCCGGCATAAACCGTTTCGTCGCGATTTTCGCAGTTCCTCTTCTATCCTTTCATTTCATCTCCACAAATAACCCTTATGCCATGAACTATAGGTTCATAGCAGCTGATACACTTCAAAAAATCATCATGCTCTTTGCACTTACAATTTGGACTAATTTCACAGCTAATGGTAGCTTAGAGTGGATGATCACAATCTTCTCTCTTTCAACATTACCCAACACTTTGGTTATGGGAATTCCACTTCTCATAGCTATGTATGGTGAATATTCCGGTACCCTTATGGTTCAAGTTGTGGTTCTTCAGTGTATCATTTGGTACACTTTGCTTTTGTTTTTGTTTGAGTATCGTGGTGCTAAGCTTTTGATTATGGAACAGTTTCCTGAAACTGCTGCTTCAATTGTTTCCTTTAAGGTTGATTCTGATGTTGTTTCGCTTGATGGAAGAGATTTTCTTGAGACAGATGCTGAGGTTGGTGATGATGGTAAGCTTCATGTTCATGTCAGAAAATCAAACGCTTCCCGGAGATCTTTTATGATGACTCCACGGCCGTCGAATCTCACCGGAGCAGAGATTTATAGCTTGAGTTCTTCCCGGAATCCGACGCCGAGAGGGTCTAATTTTAATCATACGGATTTCTACTCTATGATGGGCTATGCTCCGAGACATTCTAATTTTGGTGCTAATGATGTGTATTCCGTTCAGTCCAATTCACGTGGGCCGACTCCAAGACCGTCAAACTTCGAAGAGAACCCTGCGCCAGCTGCAACAGCGGTGCAGGCTGTGAACTCTCCGAAATTTGGATTTTATCCGGCACAAAATGTGCCGGCAGCTTACCCAGCTCCAAACCCGGAATTCTCTTCCGGGTTGAGCAAGAGTGTAAGTAAAAACTCTCAGCAACAGTTATCACAGCAACAGATTCAGCAAACAGTTCAAGTACAACCACAAACAGTTACTAACAATGGCTCTGCTGCTGCTGCTAAAACTAGCCATGATGCTAAAGAGCTTCACATGTTTGTGTGGAGCTCTAGTGCCTCGCCGGTTTCCGAAGCCAGCGGGCTTCAAGTCTTCGGCAGTGGTGCTGCTGATTACGGAGCGTCTGATCAATCTGGACGCTCCGAACAAGGTGCCAAGGAGATTAGAATGTTGGTTTCTGATGACCATCCACCAAATGGTGGTACTGTTACCAACAAAGCTATGCCAGAAACAGAGCTTGGTGGAGTAGAAGAGTTGAAATTTCCAGTTAAAGAAGAAGAATTACTGGTAGAAGATGAGGTAGAGAAAGGGGAACCAGCTGCTCTGAACAAGCTAGGAGGATCCAGCTCAACGGCGGAGCTACACCCAACAGCCACCGTGAAACACATGCCTCCGGCAAGTGTTATGACCCGTCTCATTCTGATCATGGTTTGGCGTAAGCTTATCCGTAACCCAAACACGTACTCCAGCCTCATTGGTCTAATTTGGTCTCTTGTGGCATTTAGGTGGCATGTGCATATGCCTAAAATAATAGAGAAATCAATCTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTCAGTTTAGGTTTGTTTATGGCTCTACAACCCAAGATGATTGCATGTGGAAACTCAGTTGCTTCATTTGCCATGGCTGTTCGATTTCTTACAGGTCCTGCAGTCATGGCTGCAGCTTCCATTGCTGTTGGCCTGCGTGGCAACCTTTTACGTGTAGCTATTGTTCAGGCTGCACTTCCTCAAGGGATTGTTCCATTTGTGTTTGCTAAGGAGTACAATGTCCATCCAGCCATTCTTAGTACAGGGTAA
Protein sequence

>Msa0610910

MITWHDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNYRFIAADTLQKIIMLFALTIWTNFTANGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGTLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVHVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHTDFYSMMGYAPRHSNFGANDVYSVQSNSRGPTPRPSNFEENPAPAATAVQAVNSPKFGFYPAQNVPAAYPAPNPEFSSGLSKSVSKNSQQQLSQQQIQQTVQVQPQTVTNNGSAAAAKTSHDAKELHMFVWSSSASPVSEASGLQVFGSGAADYGASDQSGRSEQGAKEIRMLVSDDHPPNGGTVTNKAMPETELGGVEELKFPVKEEELLVEDEVEKGEPAALNKLGGSSSTAELHPTATVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVAFRWHVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKMIACGNSVASFAMAVRFLTGPAVMAAASIAVGLRGNLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTG*