Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375340 | KEH21070.1 | 97.552 | 776 | 19 | 0 | 1 | 776 | 1 | 776 | 0.0 | 1551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375340 | sp|F4I3P9|MURE_ARATH | 68.509 | 778 | 200 | 11 | 1 | 749 | 1 | 762 | 0.0 | 1004 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375340 | A0A072U5D4 | 97.552 | 776 | 19 | 0 | 1 | 776 | 1 | 776 | 0.0 | 1551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1375340 | -0.803696 | 3.081888e-49 | -8.615850e-47 |
| Msa0001950 | Msa1375340 | 0.816433 | 5.544570e-52 | -8.615850e-47 |
| Msa0014410 | Msa1375340 | 0.803507 | 3.373015e-49 | -8.615850e-47 |
| Msa0027540 | Msa1375340 | 0.813241 | 2.827158e-51 | -8.615850e-47 |
| Msa0029620 | Msa1375340 | 0.811365 | 7.259550e-51 | -8.615850e-47 |
| Msa0030380 | Msa1375340 | 0.815705 | 8.059940e-52 | -8.615850e-47 |
| Msa0037820 | Msa1375340 | 0.817370 | 3.416680e-52 | -8.615850e-47 |
| Msa0044710 | Msa1375340 | 0.849759 | 2.631255e-60 | -8.615850e-47 |
| Msa0050720 | Msa1375340 | 0.845216 | 4.663542e-59 | -8.615850e-47 |
| Msa0050770 | Msa1375340 | 0.835418 | 1.697477e-56 | -8.615850e-47 |
| Msa0056520 | Msa1375340 | 0.810046 | 1.400209e-50 | -8.615850e-47 |
| Msa0056690 | Msa1375340 | 0.815365 | 9.597366e-52 | -8.615850e-47 |
| Msa0067150 | Msa1375340 | 0.800284 | 1.549202e-48 | -8.615850e-47 |
| Msa0075310 | Msa1375340 | 0.814634 | 1.393930e-51 | -8.615850e-47 |
| Msa0084680 | Msa1375340 | 0.809516 | 1.820980e-50 | -8.615850e-47 |
| Msa0102900 | Msa1375340 | 0.816841 | 4.492772e-52 | -8.615850e-47 |
| Msa0114250 | Msa1375340 | 0.801292 | 9.647853e-49 | -8.615850e-47 |
| Msa1354090 | Msa1375340 | 0.816177 | 6.324864e-52 | -8.615850e-47 |
| Msa1362510 | Msa1375340 | 0.804189 | 2.433779e-49 | -8.615850e-47 |
| Msa1375340 | Msa1378470 | 0.803076 | 4.141957e-49 | -8.615850e-47 |
| Msa1375340 | Msa1382310 | 0.806292 | 8.830974e-50 | -8.615850e-47 |
| Msa1375340 | Msa1387200 | 0.808353 | 3.229207e-50 | -8.615850e-47 |
| Msa1375340 | Msa1391490 | 0.806811 | 6.862852e-50 | -8.615850e-47 |
| Msa1375340 | Msa1398800 | 0.811934 | 5.460459e-51 | -8.615850e-47 |
| Msa1375340 | Msa1421870 | 0.828718 | 7.691845e-55 | -8.615850e-47 |
| Msa1375340 | Msa1427830 | 0.891111 | 5.353710e-74 | -8.615850e-47 |
| Msa1375340 | Msa1432390 | 0.818258 | 2.153155e-52 | -8.615850e-47 |
| Msa1375340 | Msa1440610 | 0.846698 | 1.844530e-59 | -8.615850e-47 |
| Msa1375340 | Msa1447300 | 0.821585 | 3.734202e-53 | -8.615850e-47 |
| Msa1375340 | Msa1449880 | 0.827213 | 1.770964e-54 | -8.615850e-47 |
| Msa1375340 | Msa1453620 | 0.871548 | 6.284548e-67 | -8.615850e-47 |
| Msa1375340 | Msa1454110 | 0.902463 | 9.445216e-79 | -8.615850e-47 |
| Msa1375340 | Msa1460440 | 0.822179 | 2.720393e-53 | -8.615850e-47 |
| Msa0618010 | Msa1375340 | 0.813183 | 2.911337e-51 | -8.615850e-47 |
| Msa0620110 | Msa1375340 | 0.883365 | 4.773541e-71 | -8.615850e-47 |
| Msa0621120 | Msa1375340 | 0.818556 | 1.842729e-52 | -8.615850e-47 |
| Msa0628100 | Msa1375340 | 0.804238 | 2.377544e-49 | -8.615850e-47 |
| Msa0638280 | Msa1375340 | 0.801608 | 8.310391e-49 | -8.615850e-47 |
| Msa0659890 | Msa1375340 | 0.880101 | 7.239609e-70 | -8.615850e-47 |
| Msa0661240 | Msa1375340 | 0.820843 | 5.535987e-53 | -8.615850e-47 |
| Msa0665790 | Msa1375340 | 0.824637 | 7.247487e-54 | -8.615850e-47 |
| Msa0669220 | Msa1375340 | 0.819145 | 1.354605e-52 | -8.615850e-47 |
| Msa0688370 | Msa1375340 | 0.964514 | 2.014695e-123 | -8.615850e-47 |
| Msa0705420 | Msa1375340 | 0.809278 | 2.047443e-50 | -8.615850e-47 |
| Msa0706600 | Msa1375340 | 0.879089 | 1.656095e-69 | -8.615850e-47 |
| Msa0727170 | Msa1375340 | 0.813421 | 2.581765e-51 | -8.615850e-47 |
| Msa0728280 | Msa1375340 | 0.848137 | 7.422339e-60 | -8.615850e-47 |
| Msa0728380 | Msa1375340 | 0.862039 | 6.718789e-64 | -8.615850e-47 |
| Msa0728540 | Msa1375340 | 0.863703 | 2.060262e-64 | -8.615850e-47 |
| Msa0743650 | Msa1375340 | 0.827894 | 1.215606e-54 | -8.615850e-47 |
| Msa0767520 | Msa1375340 | 0.804345 | 2.259001e-49 | -8.615850e-47 |
| Msa0776480 | Msa1375340 | 0.833315 | 5.724313e-56 | -8.615850e-47 |
| Msa0779240 | Msa1375340 | 0.800148 | 1.650859e-48 | -8.615850e-47 |
| Msa0783340 | Msa1375340 | 0.809509 | 1.826861e-50 | -8.615850e-47 |
| Msa0816640 | Msa1375340 | 0.800161 | 1.641147e-48 | -8.615850e-47 |
| Msa0828570 | Msa1375340 | 0.807355 | 5.264369e-50 | -8.615850e-47 |
| Msa0830720 | Msa1375340 | 0.801992 | 6.931673e-49 | -8.615850e-47 |
| Msa0835520 | Msa1375340 | 0.821759 | 3.403333e-53 | -8.615850e-47 |
| Msa0121800 | Msa1375340 | 0.816054 | 6.739459e-52 | -8.615850e-47 |
| Msa0142420 | Msa1375340 | 0.810233 | 1.276458e-50 | -8.615850e-47 |
| Msa0155610 | Msa1375340 | 0.828059 | 1.109308e-54 | -8.615850e-47 |
| Msa0166570 | Msa1375340 | 0.825932 | 3.579803e-54 | -8.615850e-47 |
| Msa0168100 | Msa1375340 | 0.827769 | 1.302660e-54 | -8.615850e-47 |
| Msa0169620 | Msa1375340 | 0.808530 | 2.960088e-50 | -8.615850e-47 |
| Msa0171920 | Msa1375340 | 0.802911 | 4.480759e-49 | -8.615850e-47 |
| Msa0173740 | Msa1375340 | 0.815924 | 7.204536e-52 | -8.615850e-47 |
| Msa0173820 | Msa1375340 | 0.820006 | 8.616359e-53 | -8.615850e-47 |
| Msa0173830 | Msa1375340 | 0.820182 | 7.851695e-53 | -8.615850e-47 |
| Msa0182930 | Msa1375340 | 0.837875 | 4.014487e-57 | -8.615850e-47 |
| Msa0198440 | Msa1375340 | 0.800337 | 1.511085e-48 | -8.615850e-47 |
| Msa0200950 | Msa1375340 | -0.814376 | 1.589863e-51 | -8.615850e-47 |
| Msa0238250 | Msa1375340 | -0.816388 | 5.675645e-52 | -8.615850e-47 |
| Msa1260130 | Msa1375340 | 0.841676 | 4.112239e-58 | -8.615850e-47 |
| Msa1262920 | Msa1375340 | 0.807663 | 4.528993e-50 | -8.615850e-47 |
| Msa1300050 | Msa1375340 | 0.816871 | 4.422129e-52 | -8.615850e-47 |
| Msa1302100 | Msa1375340 | 0.806463 | 8.126882e-50 | -8.615850e-47 |
| Msa1306580 | Msa1375340 | 0.987354 | 5.895401e-170 | -8.615850e-47 |
| Msa1317030 | Msa1375340 | 0.869348 | 3.312883e-66 | -8.615850e-47 |
| Msa0377280 | Msa1375340 | 0.801161 | 1.026118e-48 | -8.615850e-47 |
| Msa0378080 | Msa1375340 | 0.833657 | 4.701666e-56 | -8.615850e-47 |
| Msa0390060 | Msa1375340 | 0.806021 | 1.006970e-49 | -8.615850e-47 |
| Msa0392020 | Msa1375340 | 0.803342 | 3.649176e-49 | -8.615850e-47 |
| Msa0418430 | Msa1375340 | 0.838958 | 2.110698e-57 | -8.615850e-47 |
| Msa0462590 | Msa1375340 | 0.822967 | 1.784185e-53 | -8.615850e-47 |
| Msa0465790 | Msa1375340 | 0.821990 | 3.009134e-53 | -8.615850e-47 |
| Msa0465800 | Msa1375340 | 0.831792 | 1.365506e-55 | -8.615850e-47 |
| Msa0468160 | Msa1375340 | 0.892389 | 1.660962e-74 | -8.615850e-47 |
| Msa0470180 | Msa1375340 | 0.815320 | 9.822763e-52 | -8.615850e-47 |
| Msa0472740 | Msa1375340 | 0.835412 | 1.703930e-56 | -8.615850e-47 |
| Msa1001580 | Msa1375340 | 0.803574 | 3.267108e-49 | -8.615850e-47 |
| Msa1048330 | Msa1375340 | 0.805983 | 1.025877e-49 | -8.615850e-47 |
| Msa1072340 | Msa1375340 | 0.817833 | 2.685902e-52 | -8.615850e-47 |
| Msa0244270 | Msa1375340 | 0.805506 | 1.291612e-49 | -8.615850e-47 |
| Msa0265580 | Msa1375340 | 0.838889 | 2.198989e-57 | -8.615850e-47 |
| Msa0275680 | Msa1375340 | -0.816939 | 4.269374e-52 | -8.615850e-47 |
| Msa0303440 | Msa1375340 | 0.816405 | 5.624312e-52 | -8.615850e-47 |
| Msa0318070 | Msa1375340 | 0.801570 | 8.460016e-49 | -8.615850e-47 |
| Msa0344710 | Msa1375340 | 0.858739 | 6.697393e-63 | -8.615850e-47 |
| Msa0358170 | Msa1375340 | 0.881931 | 1.592099e-70 | -8.615850e-47 |
| Msa0358290 | Msa1375340 | 0.821910 | 3.140595e-53 | -8.615850e-47 |
| Msa1111630 | Msa1375340 | 0.841482 | 4.625984e-58 | -8.615850e-47 |
| Msa1118150 | Msa1375340 | 0.814103 | 1.827045e-51 | -8.615850e-47 |
| Msa1119570 | Msa1375340 | 0.820449 | 6.817977e-53 | -8.615850e-47 |
| Msa1144700 | Msa1375340 | 0.884223 | 2.303322e-71 | -8.615850e-47 |
| Msa1158090 | Msa1375340 | 0.820245 | 7.595353e-53 | -8.615850e-47 |
| Msa1159350 | Msa1375340 | 0.832367 | 9.843802e-56 | -8.615850e-47 |
| Msa1167170 | Msa1375340 | 0.841214 | 5.442567e-58 | -8.615850e-47 |
| Msa1177240 | Msa1375340 | 0.884704 | 1.527120e-71 | -8.615850e-47 |
| Msa1206020 | Msa1375340 | 0.801306 | 9.583830e-49 | -8.615850e-47 |
| Msa1212760 | Msa1375340 | 0.823594 | 1.273369e-53 | -8.615850e-47 |
| Msa0518040 | Msa1375340 | 0.831729 | 1.415230e-55 | -8.615850e-47 |
| Msa0522660 | Msa1375340 | 0.827661 | 1.383167e-54 | -8.615850e-47 |
| Msa0530950 | Msa1375340 | 0.829671 | 4.517952e-55 | -8.615850e-47 |
| Msa0536650 | Msa1375340 | 0.808399 | 3.157103e-50 | -8.615850e-47 |
| Msa0546840 | Msa1375340 | 0.811811 | 5.809277e-51 | -8.615850e-47 |
| Msa0571610 | Msa1375340 | 0.870272 | 1.653847e-66 | -8.615850e-47 |
| Msa0579290 | Msa1375340 | 0.816242 | 6.118061e-52 | -8.615850e-47 |
| Msa0579390 | Msa1375340 | 0.810556 | 1.086976e-50 | -8.615850e-47 |
| Msa0583740 | Msa1375340 | 0.887831 | 1.009604e-72 | -8.615850e-47 |
| Msa0590680 | Msa1375340 | 0.824755 | 6.798491e-54 | -8.615850e-47 |
| Msa0593810 | Msa1375340 | 0.817230 | 3.672677e-52 | -8.615850e-47 |
| Msa0863770 | Msa1375340 | 0.830471 | 2.882196e-55 | -8.615850e-47 |
| Msa0870150 | Msa1375340 | 0.809797 | 1.584410e-50 | -8.615850e-47 |
| Msa0880220 | Msa1375340 | 0.994996 | 4.603489e-212 | -8.615850e-47 |
| Msa0903400 | Msa1375340 | 0.842997 | 1.836467e-58 | -8.615850e-47 |
| Msa0913090 | Msa1375340 | 0.822969 | 1.782308e-53 | -8.615850e-47 |
| Msa0935850 | Msa1375340 | 0.823782 | 1.150836e-53 | -8.615850e-47 |
| Msa0950320 | Msa1375340 | 0.836209 | 1.070335e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375340 | MtrunA17_Chr8g0386951 | 97.730 | 749 | 17 | 0 | 1 | 749 | 1 | 749 | 0.0 | 1498 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375340 | AT1G63680.1 | 68.509 | 778 | 200 | 11 | 1 | 749 | 1 | 762 | 0.0 | 1004 |
| Msa1375340 | AT1G63680.3 | 68.509 | 778 | 200 | 11 | 1 | 749 | 1 | 762 | 0.0 | 1004 |
| Msa1375340 | AT1G63680.2 | 68.509 | 778 | 200 | 11 | 1 | 749 | 1 | 762 | 0.0 | 1004 |
Find 255 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAATTCAACATGATTCT+AGG | 0.209520 | tig0019653:+50217 | Msa1375340:CDS |
| AATCAGTTGGATTCGTCTTA+TGG | 0.216741 | tig0019653:+50591 | Msa1375340:CDS |
| TGGGGTTCTGGATGCTGTTT+TGG | 0.247514 | tig0019653:+50611 | Msa1375340:CDS |
| TACTTGAGAACAACATATTT+TGG | 0.249300 | tig0019653:+53860 | Msa1375340:three_prime_UTR |
| TTGTTCTCAAGTACACTTCT+AGG | 0.250600 | tig0019653:-53850 | None:intergenic |
| TGATAGGGGCCTTTCTTTGC+AGG | 0.258876 | tig0019653:+53450 | Msa1375340:three_prime_UTR |
| CTTCTATTTGATATGTTTCA+TGG | 0.262320 | tig0019653:-53057 | None:intergenic |
| AACAGCTTCAATTTCGGATT+TGG | 0.263849 | tig0019653:-49920 | None:intergenic |
| CTCTTCAACAGCTTCAATTT+CGG | 0.267858 | tig0019653:-49926 | None:intergenic |
| CATTGCTGTTGGGGCACCCT+TGG | 0.269688 | tig0019653:+51082 | Msa1375340:CDS |
| GATGAGTTTAGCTGAGCTTT+TGG | 0.274198 | tig0019653:+50140 | Msa1375340:CDS |
| GAGTTGGATTTGTTGGTATT+TGG | 0.276747 | tig0019653:-49689 | None:intergenic |
| GAAGAGGTTGATGCAGTTCC+TGG | 0.277253 | tig0019653:+51125 | Msa1375340:CDS |
| CTGTTGCTATCTTTGTCATC+AGG | 0.281451 | tig0019653:-51508 | None:intergenic |
| AATTTGGAAGTTGAAATTAA+TGG | 0.284196 | tig0019653:+50198 | Msa1375340:CDS |
| TGTTTCGGTTTACGGGAATT+TGG | 0.293661 | tig0019653:+50182 | Msa1375340:CDS |
| TCAAATAGAAGGTGAGAAAA+AGG | 0.297061 | tig0019653:+53069 | Msa1375340:CDS |
| TGGCAGTTGGCATTGCTGTT+GGG | 0.297200 | tig0019653:+51072 | Msa1375340:CDS |
| TCGGGTGGGTCGTCGTCAGC+TGG | 0.315585 | tig0019653:-49637 | None:intergenic |
| ATTGATATTGAAGATACTTT+AGG | 0.316478 | tig0019653:+50354 | Msa1375340:CDS |
| ATGCAAGAGTATCTGAAATA+TGG | 0.320054 | tig0019653:+51774 | Msa1375340:CDS |
| TGCGCCTTTGTTCGTTTCAA+TGG | 0.326884 | tig0019653:+50869 | Msa1375340:CDS |
| GTGGTTCCTGTTTCGGTTTA+CGG | 0.327895 | tig0019653:+50174 | Msa1375340:CDS |
| TACTTTAGGTTGTAAGGCTT+TGG | 0.331424 | tig0019653:+50368 | Msa1375340:CDS |
| CGGCTTGGAGTTGGATTTGT+TGG | 0.335195 | tig0019653:-49696 | None:intergenic |
| GATTCTAGGCTTGTTACTTC+TGG | 0.335990 | tig0019653:+50231 | Msa1375340:CDS |
| TAATACACCTGCTGGGATAC+TGG | 0.337449 | tig0019653:+50995 | Msa1375340:CDS |
| TGAAGATACTTTAGGTTGTA+AGG | 0.337482 | tig0019653:+50362 | Msa1375340:CDS |
| ACGGGCCTTTCGGTTATGAT+AGG | 0.338458 | tig0019653:+53434 | Msa1375340:three_prime_UTR |
| TAGAATGGTGAAGGTTGAAT+TGG | 0.341431 | tig0019653:-49506 | None:intergenic |
| GATAATCTAGCCTGCTTGAT+TGG | 0.342565 | tig0019653:-53743 | None:intergenic |
| TGGTTCCTGTTTCGGTTTAC+GGG | 0.342723 | tig0019653:+50175 | Msa1375340:CDS |
| GCGCCTTTGTTCGTTTCAAT+GGG | 0.352036 | tig0019653:+50870 | Msa1375340:CDS |
| AGGTTCGTCGGGAGCGTCTT+GGG | 0.352375 | tig0019653:-49791 | None:intergenic |
| GAGTAAAGTGGTTCCTGTTT+CGG | 0.355296 | tig0019653:+50167 | Msa1375340:CDS |
| ATGGCTCTTATTGGGATAAC+GGG | 0.357306 | tig0019653:+50462 | Msa1375340:CDS |
| ATCAGTTGGATTCGTCTTAT+GGG | 0.358561 | tig0019653:+50592 | Msa1375340:CDS |
| GGATTCGTCTTATGGGGTTC+TGG | 0.360276 | tig0019653:+50599 | Msa1375340:CDS |
| TTCTTCGCGCGGATTGGCTC+AGG | 0.360852 | tig0019653:+50692 | Msa1375340:CDS |
| TTGACGAGGAACAAGCATTT+GGG | 0.363745 | tig0019653:+51162 | Msa1375340:CDS |
| ATTTCGGATTTGGCGGGATT+AGG | 0.364946 | tig0019653:-49910 | None:intergenic |
| ATTGGGATAACGGGGACTTA+TGG | 0.366671 | tig0019653:+50471 | Msa1375340:CDS |
| ATTGACGAGGAACAAGCATT+TGG | 0.368221 | tig0019653:+51161 | Msa1375340:CDS |
| GCTAAACTCATCTTAAACTT+AGG | 0.371166 | tig0019653:-50129 | None:intergenic |
| GGGAGGGCGGAGAGGAAGTA+AGG | 0.374763 | tig0019653:-49578 | None:intergenic |
| CCCTTGGAGGATATTGTTAG+AGG | 0.378411 | tig0019653:+51098 | Msa1375340:CDS |
| GTGGCAGTTGGCATTGCTGT+TGG | 0.380126 | tig0019653:+51071 | Msa1375340:CDS |
| TGAGGCTTCTTCGCGCGGAT+TGG | 0.380295 | tig0019653:+50686 | Msa1375340:CDS |
| AAGCCTCCCTGCACTCTTCT+CGG | 0.384444 | tig0019653:-53105 | None:intergenic |
| ATGGCTAAGATGCTTCATAA+TGG | 0.390726 | tig0019653:+50645 | Msa1375340:CDS |
| ATCTTCACCCTTGGGGTTGT+CGG | 0.392594 | tig0019653:-51558 | None:intergenic |
| GTGCGATGGCGGAGGGAGGG+CGG | 0.392701 | tig0019653:-49591 | None:intergenic |
| GGGTCGTCGTCAGCTGGGTT+TGG | 0.393648 | tig0019653:-49631 | None:intergenic |
| TGCTGTTGGGGCACCCTTGG+AGG | 0.395991 | tig0019653:+51085 | Msa1375340:CDS |
| CCACTGATACCAAAGGTTGC+TGG | 0.396340 | tig0019653:+53350 | Msa1375340:CDS |
| CATGAAACATATCAAATAGA+AGG | 0.403779 | tig0019653:+53058 | Msa1375340:CDS |
| GAATTGGGTTTGATAGTTGT+AGG | 0.404063 | tig0019653:-49490 | None:intergenic |
| GTCAAAAGAAACGGGCCTTT+CGG | 0.405006 | tig0019653:+53424 | Msa1375340:three_prime_UTR |
| TCTACATCGTCGACTTCATC+AGG | 0.406443 | tig0019653:-49955 | None:intergenic |
| CGGAATCAATCTGGTGAAGA+TGG | 0.407873 | tig0019653:+53478 | Msa1375340:three_prime_UTR |
| ATCTAAATCAAAGGAAGATT+CGG | 0.408810 | tig0019653:-50064 | None:intergenic |
| AATGTCACAACAGGAACTTC+AGG | 0.413089 | tig0019653:-50897 | None:intergenic |
| GGAGGTGAGGGGTTTGTATG+GGG | 0.414593 | tig0019653:-49394 | None:intergenic |
| GCGGAATCTTCGCCTACTTC+GGG | 0.414843 | tig0019653:-49655 | None:intergenic |
| AAATTCCCGTAAACCGAAAC+AGG | 0.415050 | tig0019653:-50180 | None:intergenic |
| AGCGGAATCTTCGCCTACTT+CGG | 0.417036 | tig0019653:-49656 | None:intergenic |
| GAAGGCGAGCGCGGTCGGCT+TGG | 0.419138 | tig0019653:-49711 | None:intergenic |
| GGGAGGTGAGGGGTTTGTAT+GGG | 0.420216 | tig0019653:-49395 | None:intergenic |
| ATTTGTGTACTCAGGTGAAC+AGG | 0.423715 | tig0019653:-53394 | None:intergenic |
| TCCGCCGAAGACGATTTATT+CGG | 0.424928 | tig0019653:+49826 | Msa1375340:CDS |
| CTTTGGTATCAGTGGCTCTC+TGG | 0.425305 | tig0019653:-53342 | None:intergenic |
| ATTGTTAGCCCAGCAACCTT+TGG | 0.426686 | tig0019653:-53359 | None:intergenic |
| CAAAGAGAGTTCAAACTTCA+AGG | 0.427492 | tig0019653:-50952 | None:intergenic |
| CAACCTCGCAGGATTATAAC+TGG | 0.428629 | tig0019653:+51251 | Msa1375340:CDS |
| GAAATTTCGTCCGGTTTACT+AGG | 0.429518 | tig0019653:+51017 | Msa1375340:CDS |
| AGTACACTTCTAGGAAAGAT+AGG | 0.429709 | tig0019653:-53841 | None:intergenic |
| AAATCCCTGCATGTGAAAGC+TGG | 0.432388 | tig0019653:-53810 | None:intergenic |
| TATATATTTGCCTAGGAAGC+AGG | 0.435093 | tig0019653:-53686 | None:intergenic |
| GGATGAGGAGGACGAGGAAG+AGG | 0.435631 | tig0019653:+50764 | Msa1375340:CDS |
| TCGATTGCTAGTTATGTTCA+TGG | 0.437145 | tig0019653:+50564 | Msa1375340:CDS |
| ACACGCTAGTCCTGCTTCCT+AGG | 0.437326 | tig0019653:+53676 | Msa1375340:three_prime_UTR |
| AGGGAGGTGAGGGGTTTGTA+TGG | 0.437874 | tig0019653:-49396 | None:intergenic |
| ATACATGGATCTTCACCCTT+GGG | 0.437950 | tig0019653:-51566 | None:intergenic |
| TGTTGCTATCTTTGTCATCA+GGG | 0.440012 | tig0019653:-51507 | None:intergenic |
| TGCATGGTGCAGGTGATTGC+TGG | 0.441426 | tig0019653:+53028 | Msa1375340:intron |
| AGAATGGTGAAGGTTGAATT+GGG | 0.442438 | tig0019653:-49505 | None:intergenic |
| GTGCGAGCTTCAGTTGCAAT+GGG | 0.443311 | tig0019653:+51867 | Msa1375340:CDS |
| AAGGTTCGTCGGGAGCGTCT+TGG | 0.443705 | tig0019653:-49792 | None:intergenic |
| AGGAAGTAAGGGATAACATA+AGG | 0.447398 | tig0019653:-49566 | None:intergenic |
| CACTGATACCAAAGGTTGCT+GGG | 0.448175 | tig0019653:+53351 | Msa1375340:CDS |
| ATTACAGTGGCATGTAAGCC+AGG | 0.448898 | tig0019653:-53631 | None:intergenic |
| AGCTTCAATTTCGGATTTGG+CGG | 0.454097 | tig0019653:-49917 | None:intergenic |
| CATGGCTCTTATTGGGATAA+CGG | 0.454105 | tig0019653:+50461 | Msa1375340:CDS |
| TACTCCCAGCTTTCACATGC+AGG | 0.454876 | tig0019653:+53805 | Msa1375340:three_prime_UTR |
| TTGTAAGGCTTTGGTTATTG+TGG | 0.454945 | tig0019653:+50377 | Msa1375340:CDS |
| GAATTGAAGAAGGAAGTGTT+TGG | 0.456028 | tig0019653:-49533 | None:intergenic |
| CAGAATTCACAGTGAGTTCA+CGG | 0.458201 | tig0019653:-49993 | None:intergenic |
| AATTTGTTTGTGTGTTGTGT+TGG | 0.460206 | tig0019653:+50255 | Msa1375340:CDS |
| AGCGTCTTGGGAGTCGGCGA+TGG | 0.463001 | tig0019653:-49779 | None:intergenic |
| CCGTCGGGTGCGATGGCGGA+GGG | 0.463995 | tig0019653:-49598 | None:intergenic |
| ATTCTTGCTGCTGTGGCAGT+TGG | 0.464613 | tig0019653:+51059 | Msa1375340:CDS |
| TAAAAGTATGTATGAAGCGA+TGG | 0.466444 | tig0019653:+50518 | Msa1375340:CDS |
| ACAACTTTCCTATGCCGCTC+AGG | 0.466784 | tig0019653:-50828 | None:intergenic |
| CACTTCTAGGAAAGATAGGC+TGG | 0.467392 | tig0019653:-53837 | None:intergenic |
| CAGGAGCATCGGAATCAATC+TGG | 0.467992 | tig0019653:+53469 | Msa1375340:three_prime_UTR |
| GAGCGCGGTCGGCTTGGAGT+TGG | 0.470195 | tig0019653:-49705 | None:intergenic |
| AATTGAAGAAGGAAGTGTTT+GGG | 0.472045 | tig0019653:-49532 | None:intergenic |
| TCTTCGCGCGGATTGGCTCA+GGG | 0.472077 | tig0019653:+50693 | Msa1375340:CDS |
| TGAAGAAGAAAGGGAGGTGA+GGG | 0.474410 | tig0019653:-49406 | None:intergenic |
| GAAACGAACAAAGGCGCACT+TGG | 0.476109 | tig0019653:-50864 | None:intergenic |
| GGAGGGCGGAGAGGAAGTAA+GGG | 0.477130 | tig0019653:-49577 | None:intergenic |
| GGCAGTTGGCATTGCTGTTG+GGG | 0.477281 | tig0019653:+51073 | Msa1375340:CDS |
| ATGAAGTAGGTCAAAAGAAA+CGG | 0.477936 | tig0019653:+53415 | Msa1375340:exon |
| TCCGTCGGGTGCGATGGCGG+AGG | 0.478458 | tig0019653:-49599 | None:intergenic |
| TTGCTGTGGTGAGGACGAAA+GGG | 0.479403 | tig0019653:+51475 | Msa1375340:CDS |
| CGGGCCTTTCGGTTATGATA+GGG | 0.479425 | tig0019653:+53435 | Msa1375340:three_prime_UTR |
| CGATTGCTAGTTATGTTCAT+GGG | 0.481862 | tig0019653:+50565 | Msa1375340:CDS |
| TACTATCCTCCTCTTTCAAA+TGG | 0.483577 | tig0019653:+51807 | Msa1375340:CDS |
| GCCTTTCTTTGCAGGAGCAT+CGG | 0.485689 | tig0019653:+53458 | Msa1375340:three_prime_UTR |
| TCCAACGCAAATGTCACAAC+AGG | 0.486132 | tig0019653:-50906 | None:intergenic |
| CATAAAGTTATACATGGCGT+TGG | 0.486715 | tig0019653:-53765 | None:intergenic |
| TCCGATGCTCCTGCAAAGAA+AGG | 0.486942 | tig0019653:-53459 | None:intergenic |
| CGGGTGCGATGGCGGAGGGA+GGG | 0.487167 | tig0019653:-49594 | None:intergenic |
| TGAAGTAGGTCAAAAGAAAC+GGG | 0.487177 | tig0019653:+53416 | Msa1375340:exon |
| GACGGGAAGGGAATTGAAGA+AGG | 0.487522 | tig0019653:-49543 | None:intergenic |
| TCGGGTGCGATGGCGGAGGG+AGG | 0.487907 | tig0019653:-49595 | None:intergenic |
| TCGATGACCGAGAAGAGTGC+AGG | 0.490095 | tig0019653:+53098 | Msa1375340:CDS |
| TTATGTGAACTGAAGAAGAA+AGG | 0.491186 | tig0019653:-49416 | None:intergenic |
| GTCGGGAGCGTCTTGGGAGT+CGG | 0.495128 | tig0019653:-49785 | None:intergenic |
| TGGTGGATCCTGAGCGGCAT+AGG | 0.495152 | tig0019653:+50820 | Msa1375340:CDS |
| CTCCTCTTTCAAATGGTCAC+AGG | 0.497529 | tig0019653:+51814 | Msa1375340:CDS |
| TTCACGAAGGCGAGCGCGGT+CGG | 0.499086 | tig0019653:-49716 | None:intergenic |
| TATGTGAACTGAAGAAGAAA+GGG | 0.499874 | tig0019653:-49415 | None:intergenic |
| GTTGCTGTGGTGAGGACGAA+AGG | 0.503031 | tig0019653:+51474 | Msa1375340:CDS |
| GGCGATGGCGGCGAGGTAAG+TGG | 0.503512 | tig0019653:-49764 | None:intergenic |
| TTGCAATTTATGTTGGACTC+TGG | 0.504247 | tig0019653:-53528 | None:intergenic |
| AAGCGATGGGTTTACGTACC+GGG | 0.504543 | tig0019653:+50532 | Msa1375340:CDS |
| CACATAATATACAGTCTGAA+TGG | 0.506016 | tig0019653:+49432 | Msa1375340:exon |
| TTTGTTTGAGACACAGGTGT+TGG | 0.506074 | tig0019653:+50971 | Msa1375340:CDS |
| AGTAATCTAGACAAGGCATC+AGG | 0.506209 | tig0019653:-51209 | None:intergenic |
| CCCTCTAACAATATCCTCCA+AGG | 0.511090 | tig0019653:-51099 | None:intergenic |
| ATTTCTCATAAAGTTATACA+TGG | 0.511601 | tig0019653:-53771 | None:intergenic |
| CCTACTTCATTTGTGTACTC+AGG | 0.512817 | tig0019653:-53402 | None:intergenic |
| TTTCGTCCGGTTTACTAGGA+AGG | 0.513445 | tig0019653:+51021 | Msa1375340:CDS |
| ATCAGTGGCGGAAGGTTCGT+CGG | 0.513622 | tig0019653:-49803 | None:intergenic |
| CATACATGGATCTTCACCCT+TGG | 0.516195 | tig0019653:-51567 | None:intergenic |
| TGTTCATGGGGATAATCAGT+TGG | 0.516920 | tig0019653:+50578 | Msa1375340:CDS |
| ATTGTGCCTTCCTAGTAAAC+CGG | 0.517946 | tig0019653:-51027 | None:intergenic |
| TTCGCCGAATAAATCGTCTT+CGG | 0.522535 | tig0019653:-49830 | None:intergenic |
| CTGAAGAAGAAAGGGAGGTG+AGG | 0.523446 | tig0019653:-49407 | None:intergenic |
| GTCTTGGGAGTCGGCGATGG+CGG | 0.523882 | tig0019653:-49776 | None:intergenic |
| GTGTTGGTTAATACACCTGC+TGG | 0.525818 | tig0019653:+50987 | Msa1375340:CDS |
| TGTGCGAGCTTCAGTTGCAA+TGG | 0.526133 | tig0019653:+51866 | Msa1375340:CDS |
| TCAGTGGCGGAAGGTTCGTC+GGG | 0.527370 | tig0019653:-49802 | None:intergenic |
| GGGATACTGGAAATTTCGTC+CGG | 0.527829 | tig0019653:+51008 | Msa1375340:CDS |
| ACTCTCTTTGTTTGAGACAC+AGG | 0.527870 | tig0019653:+50965 | Msa1375340:CDS |
| GTTGACGAGCTTCATCAAGC+TGG | 0.530037 | tig0019653:+53136 | Msa1375340:CDS |
| GAATCTTCGCCTACTTCGGG+TGG | 0.530608 | tig0019653:-49652 | None:intergenic |
| ATGGAAGTTGCAATTTATGT+TGG | 0.531347 | tig0019653:-53535 | None:intergenic |
| AAGTGTGGAAGAGTAACAAA+TGG | 0.536759 | tig0019653:-49460 | None:intergenic |
| ATGTCACAACAGGAACTTCA+GGG | 0.545053 | tig0019653:-50896 | None:intergenic |
| ATATGTTGGCTGGGGTAGGA+TGG | 0.546203 | tig0019653:+51748 | Msa1375340:CDS |
| AAGAGGTTGATGCAGTTCCT+GGG | 0.546388 | tig0019653:+51126 | Msa1375340:CDS |
| AATCCCTGCATGTGAAAGCT+GGG | 0.547200 | tig0019653:-53809 | None:intergenic |
| GGATAACATAAGGGACGGGA+AGG | 0.548029 | tig0019653:-49556 | None:intergenic |
| GCTTCAATTTCGGATTTGGC+GGG | 0.551169 | tig0019653:-49916 | None:intergenic |
| GGGTCATAGTGGACTATGCT+CGG | 0.551938 | tig0019653:+51183 | Msa1375340:CDS |
| GGAAGTAAGGGATAACATAA+GGG | 0.552033 | tig0019653:-49565 | None:intergenic |
| CTTCGCGCGGATTGGCTCAG+GGG | 0.552284 | tig0019653:+50694 | Msa1375340:CDS |
| CGGGTGGGTCGTCGTCAGCT+GGG | 0.552775 | tig0019653:-49636 | None:intergenic |
| AAAAGTATGTATGAAGCGAT+GGG | 0.554179 | tig0019653:+50519 | Msa1375340:CDS |
| TACGAATTTGATGGATGAGG+AGG | 0.554797 | tig0019653:+50752 | Msa1375340:CDS |
| GAAGCGATGGGTTTACGTAC+CGG | 0.555215 | tig0019653:+50531 | Msa1375340:CDS |
| TCCTGTTGTGACATTTGCGT+TGG | 0.555371 | tig0019653:+50905 | Msa1375340:CDS |
| GGAATCAATCTGGTGAAGAT+GGG | 0.556201 | tig0019653:+53479 | Msa1375340:three_prime_UTR |
| CCTTGGAGGATATTGTTAGA+GGG | 0.557443 | tig0019653:+51099 | Msa1375340:CDS |
| ACTATCAAAATCTAAATCAA+AGG | 0.561397 | tig0019653:-50073 | None:intergenic |
| TAAGAGAGCTTCAACCTCGC+AGG | 0.561657 | tig0019653:+51240 | Msa1375340:CDS |
| TCAATTAACTCACACCTCCC+AGG | 0.561944 | tig0019653:-51143 | None:intergenic |
| CAGCTACCCTCCTAATGTCA+TGG | 0.562556 | tig0019653:-51845 | None:intergenic |
| ATCGTCTTCGGCGGAATCAG+TGG | 0.564284 | tig0019653:-49818 | None:intergenic |
| ACAAGCATTTGGGGTCATAG+TGG | 0.564472 | tig0019653:+51172 | Msa1375340:CDS |
| TCAGTTGGATTCGTCTTATG+GGG | 0.564527 | tig0019653:+50593 | Msa1375340:CDS |
| ATGGCGGAGGGAGGGCGGAG+AGG | 0.565355 | tig0019653:-49586 | None:intergenic |
| GTGAATTCTGATGAATCTCA+AGG | 0.565712 | tig0019653:+50006 | Msa1375340:CDS |
| TTTGAAGTGATTGGTTGCTG+TGG | 0.568006 | tig0019653:+51461 | Msa1375340:intron |
| GGGCCTTTCGGTTATGATAG+GGG | 0.568070 | tig0019653:+53436 | Msa1375340:three_prime_UTR |
| AAATGCTGTTCTTGCTACGT+TGG | 0.568754 | tig0019653:+50407 | Msa1375340:CDS |
| GTTGTAGGAGAAATGAAGTG+TGG | 0.569223 | tig0019653:-49475 | None:intergenic |
| CGTAAAGAGTTCGTTAAGCA+AGG | 0.569603 | tig0019653:+49877 | Msa1375340:CDS |
| GTGCAGGTGATTGCTGGTAA+AGG | 0.573284 | tig0019653:+53034 | Msa1375340:intron |
| CTTCTTCACGAAGGCGAGCG+CGG | 0.574199 | tig0019653:-49720 | None:intergenic |
| CTGAACTTGTCCAATCAAGC+AGG | 0.575216 | tig0019653:+53733 | Msa1375340:three_prime_UTR |
| GTTGCTATCTTTGTCATCAG+GGG | 0.577328 | tig0019653:-51506 | None:intergenic |
| TTACAACATTCTTGCTGCTG+TGG | 0.577487 | tig0019653:+51052 | Msa1375340:CDS |
| GGAAGAGGATAGAGATGCGA+AGG | 0.577527 | tig0019653:+50779 | Msa1375340:CDS |
| CCCTCCGCCATCGCACCCGA+CGG | 0.579629 | tig0019653:+49598 | Msa1375340:CDS |
| CCTGAGTACACAAATGAAGT+AGG | 0.583539 | tig0019653:+53402 | Msa1375340:CDS |
| TATTGTTAGAGGGATTGAAG+AGG | 0.584456 | tig0019653:+51109 | Msa1375340:CDS |
| CCAGCAACCTTTGGTATCAG+TGG | 0.584490 | tig0019653:-53350 | None:intergenic |
| CGATGACCGAGAAGAGTGCA+GGG | 0.586317 | tig0019653:+53099 | Msa1375340:CDS |
| AAAGAGAGTTCAAACTTCAA+GGG | 0.587138 | tig0019653:-50951 | None:intergenic |
| AATCTTCGCCTACTTCGGGT+GGG | 0.589280 | tig0019653:-49651 | None:intergenic |
| GACGATATGTTGGCTGGGGT+AGG | 0.590280 | tig0019653:+51744 | Msa1375340:CDS |
| TTTGATGGATGAGGAGGACG+AGG | 0.591487 | tig0019653:+50758 | Msa1375340:CDS |
| AGCCTGTGACCATTTGAAAG+AGG | 0.592989 | tig0019653:-51816 | None:intergenic |
| GGGGTTGTCGGATGTCAGCA+TGG | 0.593109 | tig0019653:-51546 | None:intergenic |
| GTAGGCGAAGATTCCGCTCA+CGG | 0.594034 | tig0019653:+49661 | Msa1375340:CDS |
| CGCCTTTGTTCGTTTCAATG+GGG | 0.598646 | tig0019653:+50871 | Msa1375340:CDS |
| TTACAGTGGCATGTAAGCCA+GGG | 0.599521 | tig0019653:-53630 | None:intergenic |
| GCGAGCTTCAGTTGCAATGG+GGG | 0.600223 | tig0019653:+51869 | Msa1375340:CDS |
| TTGAGTGAGGCTGATAAGAG+AGG | 0.600487 | tig0019653:+50303 | Msa1375340:CDS |
| TAAGGGATAACATAAGGGAC+GGG | 0.600743 | tig0019653:-49560 | None:intergenic |
| GAAATTTCCAGTATCCCAGC+AGG | 0.601448 | tig0019653:-51002 | None:intergenic |
| TGAAATCTTCTTCTTCACGA+AGG | 0.601474 | tig0019653:-49729 | None:intergenic |
| TACATGGATCTTCACCCTTG+GGG | 0.602061 | tig0019653:-51565 | None:intergenic |
| GTGAACTGAAGAAGAAAGGG+AGG | 0.602484 | tig0019653:-49412 | None:intergenic |
| TGACGAGGAACAAGCATTTG+GGG | 0.607098 | tig0019653:+51163 | Msa1375340:CDS |
| CTCCCCATTGAAACGAACAA+AGG | 0.607522 | tig0019653:-50873 | None:intergenic |
| TTGGATAAAAGCGTACTGCA+TGG | 0.607669 | tig0019653:-53554 | None:intergenic |
| ACTCCCAGCTTTCACATGCA+GGG | 0.608356 | tig0019653:+53806 | Msa1375340:three_prime_UTR |
| GACGACGACCCACCCGAAGT+AGG | 0.608809 | tig0019653:+49643 | Msa1375340:CDS |
| TTTGGACGATATGTTGGCTG+GGG | 0.620608 | tig0019653:+51740 | Msa1375340:CDS |
| AGCAATCGAGTTAAACATCC+CGG | 0.622878 | tig0019653:-50550 | None:intergenic |
| CTGTGACCATTTGAAAGAGG+AGG | 0.627307 | tig0019653:-51813 | None:intergenic |
| TCGGCGGAATCAGTGGCGGA+AGG | 0.627428 | tig0019653:-49811 | None:intergenic |
| AGTGATTGGTTGCTGTGGTG+AGG | 0.627564 | tig0019653:+51466 | Msa1375340:intron |
| GTAAGGGATAACATAAGGGA+CGG | 0.628474 | tig0019653:-49561 | None:intergenic |
| GATAACATAAGGGACGGGAA+GGG | 0.629765 | tig0019653:-49555 | None:intergenic |
| CCTCTAACAATATCCTCCAA+GGG | 0.631799 | tig0019653:-51098 | None:intergenic |
| TGCGAGCTTCAGTTGCAATG+GGG | 0.637029 | tig0019653:+51868 | Msa1375340:CDS |
| GGGAGTCGGCGATGGCGGCG+AGG | 0.639860 | tig0019653:-49771 | None:intergenic |
| GCTGTGGTGAGGACGAAAGG+GGG | 0.640166 | tig0019653:+51477 | Msa1375340:CDS |
| TCATAATGGAACTGAATCTG+TGG | 0.641742 | tig0019653:+50659 | Msa1375340:CDS |
| GAAGAAGAAAGGGAGGTGAG+GGG | 0.644791 | tig0019653:-49405 | None:intergenic |
| GCCGAATAAATCGTCTTCGG+CGG | 0.645356 | tig0019653:-49827 | None:intergenic |
| GATTGCTAGTTATGTTCATG+GGG | 0.647011 | tig0019653:+50566 | Msa1375340:CDS |
| TGTTGGTTAATACACCTGCT+GGG | 0.653292 | tig0019653:+50988 | Msa1375340:CDS |
| GTATTTGGTGAAGCCGTGAG+CGG | 0.654753 | tig0019653:-49674 | None:intergenic |
| GTCTTCGGCGGAATCAGTGG+CGG | 0.659797 | tig0019653:-49815 | None:intergenic |
| TGCTGTGGTGAGGACGAAAG+GGG | 0.660888 | tig0019653:+51476 | Msa1375340:CDS |
| GGCTCAGGGGAAATATGATG+AGG | 0.665665 | tig0019653:+50707 | Msa1375340:CDS |
| CAAGGATGGTGGATCCTGAG+CGG | 0.668101 | tig0019653:+50814 | Msa1375340:CDS |
| GCTGACATCCGACAACCCCA+AGG | 0.672170 | tig0019653:+51550 | Msa1375340:CDS |
| TACAGTGGCATGTAAGCCAG+GGG | 0.673609 | tig0019653:-53629 | None:intergenic |
| CAGAGAGCCACTGATACCAA+AGG | 0.673622 | tig0019653:+53343 | Msa1375340:CDS |
| AGGCCCCTATCATAACCGAA+AGG | 0.683015 | tig0019653:-53439 | None:intergenic |
| ACACAGAATTACAATTACAG+TGG | 0.694053 | tig0019653:-53644 | None:intergenic |
| CTGACATCCGACAACCCCAA+GGG | 0.697527 | tig0019653:+51551 | Msa1375340:CDS |
| AGAATCAAGTAATCTAGACA+AGG | 0.699983 | tig0019653:-51216 | None:intergenic |
| AGGTTGATGCAGTTCCTGGG+AGG | 0.713356 | tig0019653:+51129 | Msa1375340:CDS |
| TGGCTCTTATTGGGATAACG+GGG | 0.726754 | tig0019653:+50463 | Msa1375340:CDS |
| ATACCAGTTATAATCCTGCG+AGG | 0.748233 | tig0019653:-51254 | None:intergenic |
| TGACCGAGAAGAGTGCAGGG+AGG | 0.749733 | tig0019653:+53102 | Msa1375340:CDS |
| GAGGTGTGAGTTAATTGACG+AGG | 0.756211 | tig0019653:+51148 | Msa1375340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | + | tig0019653:52854-52873 | Msa1375340:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTT+GGG | + | tig0019653:52854-52873 | Msa1375340:intron | 0.0% |
| !!! | ATTTAGATTTTGATAGTTTA+GGG | + | tig0019653:50079-50098 | Msa1375340:CDS | 15.0% |
| !! | TGAAATTCTGAATATTTATA+GGG | - | tig0019653:52066-52085 | None:intergenic | 15.0% |
| !! | ATGAAATTCTGAATATTTAT+AGG | - | tig0019653:52067-52086 | None:intergenic | 15.0% |
| !!! | AAAGTGTAATTTTATTTTGT+AGG | + | tig0019653:52196-52215 | Msa1375340:intron | 15.0% |
| !!! | AAGTGTAATTTTATTTTGTA+GGG | + | tig0019653:52197-52216 | Msa1375340:intron | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | + | tig0019653:52227-52246 | Msa1375340:intron | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | + | tig0019653:52228-52247 | Msa1375340:intron | 15.0% |
| !! | AAAAAAAAAAAAAGATGAGT+TGG | - | tig0019653:52847-52866 | None:intergenic | 15.0% |
| !!! | ATATTTTTATATATTTGCCT+AGG | - | tig0019653:53696-53715 | None:intergenic | 15.0% |
| !! | ACTATCAAAATCTAAATCAA+AGG | - | tig0019653:50076-50095 | None:intergenic | 20.0% |
| !!! | GATTTAGATTTTGATAGTTT+AGG | + | tig0019653:50078-50097 | Msa1375340:CDS | 20.0% |
| !! | AATTTGGAAGTTGAAATTAA+TGG | + | tig0019653:50198-50217 | Msa1375340:CDS | 20.0% |
| !! | ATTGATATTGAAGATACTTT+AGG | + | tig0019653:50354-50373 | Msa1375340:CDS | 20.0% |
| !!! | TTTTTGGGTTACTAATTATA+AGG | + | tig0019653:51342-51361 | Msa1375340:intron | 20.0% |
| !! | GCATAATTAATTATATCGTT+TGG | + | tig0019653:51389-51408 | Msa1375340:intron | 20.0% |
| !!! | GTAAAAAGTATGAAAGAATT+AGG | - | tig0019653:51702-51721 | None:intergenic | 20.0% |
| !!! | ACTTTTTACTTTTTATTCAG+TGG | + | tig0019653:51713-51732 | Msa1375340:intron | 20.0% |
| !!! | TTTTTATTCAGTGGATATTT+TGG | + | tig0019653:51722-51741 | Msa1375340:intron | 20.0% |
| !!! | TTGCTTAATTTAAACCATTT+TGG | + | tig0019653:51986-52005 | Msa1375340:intron | 20.0% |
| !! | AATAGGGTTAATTAAGTAAA+TGG | + | tig0019653:52039-52058 | Msa1375340:intron | 20.0% |
| !!! | TTTTACGTCAACATTTTTTT+TGG | + | tig0019653:52136-52155 | Msa1375340:intron | 20.0% |
| !!! | TATTTTCCTTTAGCATTTTA+GGG | - | tig0019653:52163-52182 | None:intergenic | 20.0% |
| !!! | ATATTTTCCTTTAGCATTTT+AGG | - | tig0019653:52164-52183 | None:intergenic | 20.0% |
| !! | AACAAACATAGAATAACTAT+TGG | + | tig0019653:52517-52536 | Msa1375340:intron | 20.0% |
| !! | ATATGAATAATAATTGTGGA+TGG | - | tig0019653:52543-52562 | None:intergenic | 20.0% |
| !! | GTGAATATGAATAATAATTG+TGG | - | tig0019653:52547-52566 | None:intergenic | 20.0% |
| !! | AATTATTATTCATATTCACG+TGG | + | tig0019653:52548-52567 | Msa1375340:intron | 20.0% |
| !! | ATTAAATCTTACTTAGTGAA+TGG | + | tig0019653:52752-52771 | Msa1375340:intron | 20.0% |
| !!! | CTTCTTGCATATTAATATTT+TGG | - | tig0019653:52958-52977 | None:intergenic | 20.0% |
| !! | CAAAATATTAATATGCAAGA+AGG | + | tig0019653:52956-52975 | Msa1375340:intron | 20.0% |
| !!! | AAGAAGGAATTGTTTATTTT+TGG | + | tig0019653:52972-52991 | Msa1375340:intron | 20.0% |
| !! | TATAGACAAAAATAAAAGGT+TGG | - | tig0019653:53576-53595 | None:intergenic | 20.0% |
| !! | GCTATATAGACAAAAATAAA+AGG | - | tig0019653:53580-53599 | None:intergenic | 20.0% |
| !! | GAAGGAAAAAAAAAAAGAAT+TGG | - | tig0019653:53602-53621 | None:intergenic | 20.0% |
| !! | ATTTCTCATAAAGTTATACA+TGG | - | tig0019653:53774-53793 | None:intergenic | 20.0% |
| ! | ATCTAAATCAAAGGAAGATT+CGG | - | tig0019653:50067-50086 | None:intergenic | 25.0% |
| ! | TGTATTTCTCTTAATTGATG+TGG | + | tig0019653:51280-51299 | Msa1375340:intron | 25.0% |
| ! | AGTTCAAAACAAAATTGAGA+AGG | - | tig0019653:51313-51332 | None:intergenic | 25.0% |
| !!! | TCTCAATTTTGTTTTGAACT+TGG | + | tig0019653:51313-51332 | Msa1375340:intron | 25.0% |
| !!! | TTGAACTTGGAGAAATTTTT+TGG | + | tig0019653:51326-51345 | Msa1375340:intron | 25.0% |
| !!! | TGAACTTGGAGAAATTTTTT+GGG | + | tig0019653:51327-51346 | Msa1375340:intron | 25.0% |
| ! | CTTCAAAAGAAGAAAAAAGA+CGG | - | tig0019653:51448-51467 | None:intergenic | 25.0% |
| !!! | TTTTCTTCTTTTGAAGTGAT+TGG | + | tig0019653:51452-51471 | Msa1375340:intron | 25.0% |
| ! | GTTAAGACATTGTGAAATTT+GGG | - | tig0019653:51662-51681 | None:intergenic | 25.0% |
| ! | AGTTAAGACATTGTGAAATT+TGG | - | tig0019653:51663-51682 | None:intergenic | 25.0% |
| !!! | ATTTAAACCATTTTGGTTCT+TGG | + | tig0019653:51993-52012 | Msa1375340:intron | 25.0% |
| !! | GTTGACGTAAAATTTTTACA+GGG | - | tig0019653:52128-52147 | None:intergenic | 25.0% |
| !! | TGTTGACGTAAAATTTTTAC+AGG | - | tig0019653:52129-52148 | None:intergenic | 25.0% |
| ! | TCAAGGGTTAATTAAGTAAA+TGG | - | tig0019653:52255-52274 | None:intergenic | 25.0% |
| ! | CACATCTTAATATTGTTCAA+GGG | - | tig0019653:52271-52290 | None:intergenic | 25.0% |
| ! | ACACATCTTAATATTGTTCA+AGG | - | tig0019653:52272-52291 | None:intergenic | 25.0% |
| ! | TCAAAGTGATATTTCAACTA+AGG | + | tig0019653:52293-52312 | Msa1375340:intron | 25.0% |
| !!! | TGTTGTTGCAACTTATTTTA+GGG | - | tig0019653:52324-52343 | None:intergenic | 25.0% |
| !!! | TTGTTGTTGCAACTTATTTT+AGG | - | tig0019653:52325-52344 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | tig0019653:52405-52424 | None:intergenic | 25.0% |
| !! | TTCCATTGCTACTTAATTTA+GGG | - | tig0019653:52436-52455 | None:intergenic | 25.0% |
| !! | TTTCCATTGCTACTTAATTT+AGG | - | tig0019653:52437-52456 | None:intergenic | 25.0% |
| ! | GTTTGACGCATTTAAATTTA+AGG | - | tig0019653:52500-52519 | None:intergenic | 25.0% |
| ! | ATTAGGATTCCAACATTTAA+GGG | - | tig0019653:52669-52688 | None:intergenic | 25.0% |
| ! | TCACTAAGTAAGATTTAATG+AGG | - | tig0019653:52751-52770 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGGTATGAACT+TGG | + | tig0019653:52880-52899 | Msa1375340:intron | 25.0% |
| ! | CTTCTATTTGATATGTTTCA+TGG | - | tig0019653:53060-53079 | None:intergenic | 25.0% |
| ! | CATGAAACATATCAAATAGA+AGG | + | tig0019653:53058-53077 | Msa1375340:CDS | 25.0% |
| !!! | TTTTGTTGTCTTTTTATGAC+TGG | + | tig0019653:53207-53226 | Msa1375340:intron | 25.0% |
| !! | TACTTGAGAACAACATATTT+TGG | + | tig0019653:53860-53879 | Msa1375340:three_prime_UTR | 25.0% |
| TATGTGAACTGAAGAAGAAA+GGG | - | tig0019653:49418-49437 | None:intergenic | 30.0% | |
| TTATGTGAACTGAAGAAGAA+AGG | - | tig0019653:49419-49438 | None:intergenic | 30.0% | |
| CACATAATATACAGTCTGAA+TGG | + | tig0019653:49432-49451 | Msa1375340:exon | 30.0% | |
| !! | AATTGAAGAAGGAAGTGTTT+GGG | - | tig0019653:49535-49554 | None:intergenic | 30.0% |
| GCTAAACTCATCTTAAACTT+AGG | - | tig0019653:50132-50151 | None:intergenic | 30.0% | |
| ATGGAATTCAACATGATTCT+AGG | + | tig0019653:50217-50236 | Msa1375340:CDS | 30.0% | |
| ! | AATTTGTTTGTGTGTTGTGT+TGG | + | tig0019653:50255-50274 | Msa1375340:CDS | 30.0% |
| !! | TGAAGATACTTTAGGTTGTA+AGG | + | tig0019653:50362-50381 | Msa1375340:CDS | 30.0% |
| TAAGTATCCTTCGAAAAACA+TGG | + | tig0019653:50443-50462 | Msa1375340:CDS | 30.0% | |
| ! | TAAAAGTATGTATGAAGCGA+TGG | + | tig0019653:50518-50537 | Msa1375340:CDS | 30.0% |
| ! | AAAAGTATGTATGAAGCGAT+GGG | + | tig0019653:50519-50538 | Msa1375340:CDS | 30.0% |
| !!! | TGTTTTGGTTCAGAATTTGA+TGG | + | tig0019653:50626-50645 | Msa1375340:CDS | 30.0% |
| !!! | TGCTGTTTTTACGAATTTGA+TGG | + | tig0019653:50743-50762 | Msa1375340:CDS | 30.0% |
| !! | TTTTACGAATTTGATGGATG+AGG | + | tig0019653:50749-50768 | Msa1375340:CDS | 30.0% |
| AAAGAGAGTTCAAACTTCAA+GGG | - | tig0019653:50954-50973 | None:intergenic | 30.0% | |
| AGAATCAAGTAATCTAGACA+AGG | - | tig0019653:51219-51238 | None:intergenic | 30.0% | |
| TTTCTCTTAATTGATGTGGA+AGG | + | tig0019653:51284-51303 | Msa1375340:intron | 30.0% | |
| AAAAGAAGAAAAAAGACGGT+CGG | - | tig0019653:51444-51463 | None:intergenic | 30.0% | |
| CCAATGTCAAAATACATACA+TGG | - | tig0019653:51584-51603 | None:intergenic | 30.0% | |
| !!! | CCATGTATGTATTTTGACAT+TGG | + | tig0019653:51581-51600 | Msa1375340:intron | 30.0% |
| TTCGTATATTGCTCTTAACA+AGG | - | tig0019653:51621-51640 | None:intergenic | 30.0% | |
| !! | ATGCAAGAGTATCTGAAATA+TGG | + | tig0019653:51774-51793 | Msa1375340:CDS | 30.0% |
| AGAAATACCAAGAACCAAAA+TGG | - | tig0019653:52003-52022 | None:intergenic | 30.0% | |
| ! | TGCTGACGAAAATTTTTACA+GGG | - | tig0019653:52097-52116 | None:intergenic | 30.0% |
| ! | ATGCTGACGAAAATTTTTAC+AGG | - | tig0019653:52098-52117 | None:intergenic | 30.0% |
| ATGCTAAAGGAAAATATCAC+AGG | + | tig0019653:52167-52186 | Msa1375340:intron | 30.0% | |
| TGCTAAAGGAAAATATCACA+GGG | + | tig0019653:52168-52187 | Msa1375340:intron | 30.0% | |
| CTTAATTTAGGGAAATGTGA+TGG | - | tig0019653:52425-52444 | None:intergenic | 30.0% | |
| TTCCCTAAATTAAGTAGCAA+TGG | + | tig0019653:52431-52450 | Msa1375340:intron | 30.0% | |
| !! | TTTGTCAACAGCTTTGAATA+TGG | - | tig0019653:52467-52486 | None:intergenic | 30.0% |
| TTCAAAGCTGTTGACAAATT+TGG | + | tig0019653:52469-52488 | Msa1375340:intron | 30.0% | |
| GATCTTATGAAGTTACAACT+TGG | + | tig0019653:52615-52634 | Msa1375340:intron | 30.0% | |
| TTAGGATTCCAACATTTAAG+GGG | - | tig0019653:52668-52687 | None:intergenic | 30.0% | |
| GATTAGGATTCCAACATTTA+AGG | - | tig0019653:52670-52689 | None:intergenic | 30.0% | |
| !! | AGGATTAGTTAAAGCTTCAT+AGG | - | tig0019653:52717-52736 | None:intergenic | 30.0% |
| TTAATGAGGAAAAAATCGAC+AGG | - | tig0019653:52737-52756 | None:intergenic | 30.0% | |
| ACTAATCCCCTTAATCATTT+CGG | + | tig0019653:52927-52946 | Msa1375340:intron | 30.0% | |
| ! | TGGAATGTGATTTGTCAATA+AGG | + | tig0019653:52992-53011 | Msa1375340:intron | 30.0% |
| ! | GGAATGTGATTTGTCAATAA+GGG | + | tig0019653:52993-53012 | Msa1375340:intron | 30.0% |
| TCAAATAGAAGGTGAGAAAA+AGG | + | tig0019653:53069-53088 | Msa1375340:CDS | 30.0% | |
| TAGATACAAGTGAATTTCCA+TGG | + | tig0019653:53161-53180 | Msa1375340:intron | 30.0% | |
| ATGAAGTAGGTCAAAAGAAA+CGG | + | tig0019653:53415-53434 | Msa1375340:exon | 30.0% | |
| ATGGAAGTTGCAATTTATGT+TGG | - | tig0019653:53538-53557 | None:intergenic | 30.0% | |
| ACACAGAATTACAATTACAG+TGG | - | tig0019653:53647-53666 | None:intergenic | 30.0% | |
| AAGTGTGGAAGAGTAACAAA+TGG | - | tig0019653:49463-49482 | None:intergenic | 35.0% | |
| ! | GAATTGGGTTTGATAGTTGT+AGG | - | tig0019653:49493-49512 | None:intergenic | 35.0% |
| AGAATGGTGAAGGTTGAATT+GGG | - | tig0019653:49508-49527 | None:intergenic | 35.0% | |
| TAGAATGGTGAAGGTTGAAT+TGG | - | tig0019653:49509-49528 | None:intergenic | 35.0% | |
| !!! | TTTGGGTTTTAGAATGGTGA+AGG | - | tig0019653:49518-49537 | None:intergenic | 35.0% |
| !!! | GAAGTGTTTGGGTTTTAGAA+TGG | - | tig0019653:49524-49543 | None:intergenic | 35.0% |
| !! | GAATTGAAGAAGGAAGTGTT+TGG | - | tig0019653:49536-49555 | None:intergenic | 35.0% |
| GGAAGTAAGGGATAACATAA+GGG | - | tig0019653:49568-49587 | None:intergenic | 35.0% | |
| AGGAAGTAAGGGATAACATA+AGG | - | tig0019653:49569-49588 | None:intergenic | 35.0% | |
| ! | TTTGGATAGAATTTTCCGTC+GGG | - | tig0019653:49616-49635 | None:intergenic | 35.0% |
| ! | GTTTGGATAGAATTTTCCGT+CGG | - | tig0019653:49617-49636 | None:intergenic | 35.0% |
| !! | GAGTTGGATTTGTTGGTATT+TGG | - | tig0019653:49692-49711 | None:intergenic | 35.0% |
| TGAAATCTTCTTCTTCACGA+AGG | - | tig0019653:49732-49751 | None:intergenic | 35.0% | |
| AACAGCTTCAATTTCGGATT+TGG | - | tig0019653:49923-49942 | None:intergenic | 35.0% | |
| CTCTTCAACAGCTTCAATTT+CGG | - | tig0019653:49929-49948 | None:intergenic | 35.0% | |
| GTGAATTCTGATGAATCTCA+AGG | + | tig0019653:50006-50025 | Msa1375340:CDS | 35.0% | |
| !! | CAAGGAGATTTTGAAGAAGA+TGG | + | tig0019653:50024-50043 | Msa1375340:CDS | 35.0% |
| TGTGTTGGAAGAAAAAACGA+TGG | + | tig0019653:50270-50289 | Msa1375340:CDS | 35.0% | |
| !!! | TGGACATATGTTTTTGAGTG+AGG | + | tig0019653:50290-50309 | Msa1375340:CDS | 35.0% |
| !! | TACTTTAGGTTGTAAGGCTT+TGG | + | tig0019653:50368-50387 | Msa1375340:CDS | 35.0% |
| ! | TTGTAAGGCTTTGGTTATTG+TGG | + | tig0019653:50377-50396 | Msa1375340:CDS | 35.0% |
| !! | ATAAGAGCCATGTTTTTCGA+AGG | - | tig0019653:50453-50472 | None:intergenic | 35.0% |
| TCGAAAAACATGGCTCTTAT+TGG | + | tig0019653:50453-50472 | Msa1375340:CDS | 35.0% | |
| CGAAAAACATGGCTCTTATT+GGG | + | tig0019653:50454-50473 | Msa1375340:CDS | 35.0% | |
| TCGATTGCTAGTTATGTTCA+TGG | + | tig0019653:50564-50583 | Msa1375340:CDS | 35.0% | |
| CGATTGCTAGTTATGTTCAT+GGG | + | tig0019653:50565-50584 | Msa1375340:CDS | 35.0% | |
| GATTGCTAGTTATGTTCATG+GGG | + | tig0019653:50566-50585 | Msa1375340:CDS | 35.0% | |
| AATCAGTTGGATTCGTCTTA+TGG | + | tig0019653:50591-50610 | Msa1375340:CDS | 35.0% | |
| ATCAGTTGGATTCGTCTTAT+GGG | + | tig0019653:50592-50611 | Msa1375340:CDS | 35.0% | |
| ATGGCTAAGATGCTTCATAA+TGG | + | tig0019653:50645-50664 | Msa1375340:CDS | 35.0% | |
| ! | TCATAATGGAACTGAATCTG+TGG | + | tig0019653:50659-50678 | Msa1375340:CDS | 35.0% |
| ! | AACTGAATCTGTGGTTTTTG+AGG | + | tig0019653:50668-50687 | Msa1375340:CDS | 35.0% |
| CAAAGAGAGTTCAAACTTCA+AGG | - | tig0019653:50955-50974 | None:intergenic | 35.0% | |
| TATTGTTAGAGGGATTGAAG+AGG | + | tig0019653:51109-51128 | Msa1375340:CDS | 35.0% | |
| TGTTGCTATCTTTGTCATCA+GGG | - | tig0019653:51510-51529 | None:intergenic | 35.0% | |
| TTCACAATGTCTTAACTAGC+AGG | + | tig0019653:51666-51685 | Msa1375340:intron | 35.0% | |
| TCACAATGTCTTAACTAGCA+GGG | + | tig0019653:51667-51686 | Msa1375340:intron | 35.0% | |
| !! | GGATATTTTGGACGATATGT+TGG | + | tig0019653:51734-51753 | Msa1375340:CDS | 35.0% |
| TACTATCCTCCTCTTTCAAA+TGG | + | tig0019653:51807-51826 | Msa1375340:CDS | 35.0% | |
| ! | TTTTTCTCCATGACATTAGG+AGG | + | tig0019653:51838-51857 | Msa1375340:CDS | 35.0% |
| ! | TTTTCTCCATGACATTAGGA+GGG | + | tig0019653:51839-51858 | Msa1375340:CDS | 35.0% |
| ! | TTGGTTCTTGGTATTTCTTG+TGG | + | tig0019653:52005-52024 | Msa1375340:intron | 35.0% |
| TTGTGGAAAAGCTGAACAAT+AGG | + | tig0019653:52022-52041 | Msa1375340:intron | 35.0% | |
| TGTGGAAAAGCTGAACAATA+GGG | + | tig0019653:52023-52042 | Msa1375340:intron | 35.0% | |
| TTTGGTCCCTAAAATGCTAA+AGG | + | tig0019653:52154-52173 | Msa1375340:intron | 35.0% | |
| CTACTTAAACGAGACAGATT+AGG | - | tig0019653:52686-52705 | None:intergenic | 35.0% | |
| TTAAAGCTTCATAGGAAGCA+AGG | - | tig0019653:52709-52728 | None:intergenic | 35.0% | |
| GTGATTCCGAAATGATTAAG+GGG | - | tig0019653:52936-52955 | None:intergenic | 35.0% | |
| GGTGATTCCGAAATGATTAA+GGG | - | tig0019653:52937-52956 | None:intergenic | 35.0% | |
| TGGTGATTCCGAAATGATTA+AGG | - | tig0019653:52938-52957 | None:intergenic | 35.0% | |
| ATACAAGTGAATTTCCATGG+CGG | + | tig0019653:53164-53183 | Msa1375340:intron | 35.0% | |
| ! | TTGTCTTTTTATGACTGGCA+TGG | + | tig0019653:53212-53231 | Msa1375340:intron | 35.0% |
| TCTCTTGCATTTATTGTTGC+AGG | + | tig0019653:53316-53335 | Msa1375340:intron | 35.0% | |
| TGAAGTAGGTCAAAAGAAAC+GGG | + | tig0019653:53416-53435 | Msa1375340:exon | 35.0% | |
| TTGCAATTTATGTTGGACTC+TGG | - | tig0019653:53531-53550 | None:intergenic | 35.0% | |
| TATATATTTGCCTAGGAAGC+AGG | - | tig0019653:53689-53708 | None:intergenic | 35.0% | |
| CATAAAGTTATACATGGCGT+TGG | - | tig0019653:53768-53787 | None:intergenic | 35.0% | |
| ! | AGTACACTTCTAGGAAAGAT+AGG | - | tig0019653:53844-53863 | None:intergenic | 35.0% |
| TTGTTCTCAAGTACACTTCT+AGG | - | tig0019653:53853-53872 | None:intergenic | 35.0% | |
| GTTGTAGGAGAAATGAAGTG+TGG | - | tig0019653:49478-49497 | None:intergenic | 40.0% | |
| TAAGGGATAACATAAGGGAC+GGG | - | tig0019653:49563-49582 | None:intergenic | 40.0% | |
| GTAAGGGATAACATAAGGGA+CGG | - | tig0019653:49564-49583 | None:intergenic | 40.0% | |
| TTCGCCGAATAAATCGTCTT+CGG | - | tig0019653:49833-49852 | None:intergenic | 40.0% | |
| CGTAAAGAGTTCGTTAAGCA+AGG | + | tig0019653:49877-49896 | Msa1375340:CDS | 40.0% | |
| AGCTTCAATTTCGGATTTGG+CGG | - | tig0019653:49920-49939 | None:intergenic | 40.0% | |
| CAGAATTCACAGTGAGTTCA+CGG | - | tig0019653:49996-50015 | None:intergenic | 40.0% | |
| ! | GATGAGTTTAGCTGAGCTTT+TGG | + | tig0019653:50140-50159 | Msa1375340:CDS | 40.0% |
| ! | GCTTTTGGATGAGAGTAAAG+TGG | + | tig0019653:50155-50174 | Msa1375340:CDS | 40.0% |
| GAGTAAAGTGGTTCCTGTTT+CGG | + | tig0019653:50167-50186 | Msa1375340:CDS | 40.0% | |
| AAATTCCCGTAAACCGAAAC+AGG | - | tig0019653:50183-50202 | None:intergenic | 40.0% | |
| TGTTTCGGTTTACGGGAATT+TGG | + | tig0019653:50182-50201 | Msa1375340:CDS | 40.0% | |
| !! | GATTCTAGGCTTGTTACTTC+TGG | + | tig0019653:50231-50250 | Msa1375340:CDS | 40.0% |
| AAATGCTGTTCTTGCTACGT+TGG | + | tig0019653:50407-50426 | Msa1375340:CDS | 40.0% | |
| CATGGCTCTTATTGGGATAA+CGG | + | tig0019653:50461-50480 | Msa1375340:CDS | 40.0% | |
| ATGGCTCTTATTGGGATAAC+GGG | + | tig0019653:50462-50481 | Msa1375340:CDS | 40.0% | |
| AGCAATCGAGTTAAACATCC+CGG | - | tig0019653:50553-50572 | None:intergenic | 40.0% | |
| TGTTCATGGGGATAATCAGT+TGG | + | tig0019653:50578-50597 | Msa1375340:CDS | 40.0% | |
| TCAGTTGGATTCGTCTTATG+GGG | + | tig0019653:50593-50612 | Msa1375340:CDS | 40.0% | |
| ! | TACGAATTTGATGGATGAGG+AGG | + | tig0019653:50752-50771 | Msa1375340:CDS | 40.0% |
| !! | TAAGCTGTTTTCAAGGATGG+TGG | + | tig0019653:50803-50822 | Msa1375340:CDS | 40.0% |
| ATGTCACAACAGGAACTTCA+GGG | - | tig0019653:50899-50918 | None:intergenic | 40.0% | |
| AATGTCACAACAGGAACTTC+AGG | - | tig0019653:50900-50919 | None:intergenic | 40.0% | |
| ! | ACTCTCTTTGTTTGAGACAC+AGG | + | tig0019653:50965-50984 | Msa1375340:CDS | 40.0% |
| ! | TTTGTTTGAGACACAGGTGT+TGG | + | tig0019653:50971-50990 | Msa1375340:CDS | 40.0% |
| ! | TGTTGGTTAATACACCTGCT+GGG | + | tig0019653:50988-51007 | Msa1375340:CDS | 40.0% |
| GAAATTTCGTCCGGTTTACT+AGG | + | tig0019653:51017-51036 | Msa1375340:CDS | 40.0% | |
| ATTGTGCCTTCCTAGTAAAC+CGG | - | tig0019653:51030-51049 | None:intergenic | 40.0% | |
| TTACAACATTCTTGCTGCTG+TGG | + | tig0019653:51052-51071 | Msa1375340:CDS | 40.0% | |
| CCTCTAACAATATCCTCCAA+GGG | - | tig0019653:51101-51120 | None:intergenic | 40.0% | |
| CCTTGGAGGATATTGTTAGA+GGG | + | tig0019653:51099-51118 | Msa1375340:CDS | 40.0% | |
| ATTGACGAGGAACAAGCATT+TGG | + | tig0019653:51161-51180 | Msa1375340:CDS | 40.0% | |
| TTGACGAGGAACAAGCATTT+GGG | + | tig0019653:51162-51181 | Msa1375340:CDS | 40.0% | |
| ! | AGTAATCTAGACAAGGCATC+AGG | - | tig0019653:51212-51231 | None:intergenic | 40.0% |
| ATACCAGTTATAATCCTGCG+AGG | - | tig0019653:51257-51276 | None:intergenic | 40.0% | |
| ! | TTTGAAGTGATTGGTTGCTG+TGG | + | tig0019653:51461-51480 | Msa1375340:intron | 40.0% |
| GTTGCTATCTTTGTCATCAG+GGG | - | tig0019653:51509-51528 | None:intergenic | 40.0% | |
| CTGTTGCTATCTTTGTCATC+AGG | - | tig0019653:51511-51530 | None:intergenic | 40.0% | |
| ATACATGGATCTTCACCCTT+GGG | - | tig0019653:51569-51588 | None:intergenic | 40.0% | |
| ! | ATTTTGGACGATATGTTGGC+TGG | + | tig0019653:51738-51757 | Msa1375340:CDS | 40.0% |
| !! | TTTTGGACGATATGTTGGCT+GGG | + | tig0019653:51739-51758 | Msa1375340:CDS | 40.0% |
| !! | GGCTTTTTCTCCATGACATT+AGG | + | tig0019653:51835-51854 | Msa1375340:CDS | 40.0% |
| TCATCCATGAAACTGAACGT+TGG | - | tig0019653:52586-52605 | None:intergenic | 40.0% | |
| ! | TCCAACATTTAAGGGGTACA+GGG | - | tig0019653:52661-52680 | None:intergenic | 40.0% |
| ! | TTCCAACATTTAAGGGGTAC+AGG | - | tig0019653:52662-52681 | None:intergenic | 40.0% |
| TTTGACTGTCAGTCTACACT+TGG | + | tig0019653:52820-52839 | Msa1375340:intron | 40.0% | |
| ! | AGGGTACACTTTTATGTGCA+TGG | + | tig0019653:53012-53031 | Msa1375340:intron | 40.0% |
| AACATTTGACATTACCGCCA+TGG | - | tig0019653:53181-53200 | None:intergenic | 40.0% | |
| ATTTGTGTACTCAGGTGAAC+AGG | - | tig0019653:53397-53416 | None:intergenic | 40.0% | |
| CCTACTTCATTTGTGTACTC+AGG | - | tig0019653:53405-53424 | None:intergenic | 40.0% | |
| CCTGAGTACACAAATGAAGT+AGG | + | tig0019653:53402-53421 | Msa1375340:CDS | 40.0% | |
| GGAATCAATCTGGTGAAGAT+GGG | + | tig0019653:53479-53498 | Msa1375340:three_prime_UTR | 40.0% | |
| ! | TTGGATAAAAGCGTACTGCA+TGG | - | tig0019653:53557-53576 | None:intergenic | 40.0% |
| ! | TTTTCCTTCCTTTTTTCCCC+TGG | + | tig0019653:53613-53632 | Msa1375340:three_prime_UTR | 40.0% |
| GATAATCTAGCCTGCTTGAT+TGG | - | tig0019653:53746-53765 | None:intergenic | 40.0% | |
| TGAAGAAGAAAGGGAGGTGA+GGG | - | tig0019653:49409-49428 | None:intergenic | 45.0% | |
| GTGAACTGAAGAAGAAAGGG+AGG | - | tig0019653:49415-49434 | None:intergenic | 45.0% | |
| GATAACATAAGGGACGGGAA+GGG | - | tig0019653:49558-49577 | None:intergenic | 45.0% | |
| TCCGCCGAAGACGATTTATT+CGG | + | tig0019653:49826-49845 | Msa1375340:CDS | 45.0% | |
| ATTTCGGATTTGGCGGGATT+AGG | - | tig0019653:49913-49932 | None:intergenic | 45.0% | |
| GCTTCAATTTCGGATTTGGC+GGG | - | tig0019653:49919-49938 | None:intergenic | 45.0% | |
| !! | TCTACATCGTCGACTTCATC+AGG | - | tig0019653:49958-49977 | None:intergenic | 45.0% |
| GTGGTTCCTGTTTCGGTTTA+CGG | + | tig0019653:50174-50193 | Msa1375340:CDS | 45.0% | |
| TGGTTCCTGTTTCGGTTTAC+GGG | + | tig0019653:50175-50194 | Msa1375340:CDS | 45.0% | |
| TTGAGTGAGGCTGATAAGAG+AGG | + | tig0019653:50303-50322 | Msa1375340:CDS | 45.0% | |
| TGGCTCTTATTGGGATAACG+GGG | + | tig0019653:50463-50482 | Msa1375340:CDS | 45.0% | |
| !! | ATTGGGATAACGGGGACTTA+TGG | + | tig0019653:50471-50490 | Msa1375340:CDS | 45.0% |
| !! | CGAAGGCTAAGCTGTTTTCA+AGG | + | tig0019653:50796-50815 | Msa1375340:CDS | 45.0% |
| !! | GGCTAAGCTGTTTTCAAGGA+TGG | + | tig0019653:50800-50819 | Msa1375340:CDS | 45.0% |
| TGCGCCTTTGTTCGTTTCAA+TGG | + | tig0019653:50869-50888 | Msa1375340:CDS | 45.0% | |
| GCGCCTTTGTTCGTTTCAAT+GGG | + | tig0019653:50870-50889 | Msa1375340:CDS | 45.0% | |
| CGCCTTTGTTCGTTTCAATG+GGG | + | tig0019653:50871-50890 | Msa1375340:CDS | 45.0% | |
| CTCCCCATTGAAACGAACAA+AGG | - | tig0019653:50876-50895 | None:intergenic | 45.0% | |
| TCCTGTTGTGACATTTGCGT+TGG | + | tig0019653:50905-50924 | Msa1375340:CDS | 45.0% | |
| TCCAACGCAAATGTCACAAC+AGG | - | tig0019653:50909-50928 | None:intergenic | 45.0% | |
| !! | GTGTTGGTTAATACACCTGC+TGG | + | tig0019653:50987-51006 | Msa1375340:CDS | 45.0% |
| TAATACACCTGCTGGGATAC+TGG | + | tig0019653:50995-51014 | Msa1375340:CDS | 45.0% | |
| GAAATTTCCAGTATCCCAGC+AGG | - | tig0019653:51005-51024 | None:intergenic | 45.0% | |
| GGGATACTGGAAATTTCGTC+CGG | + | tig0019653:51008-51027 | Msa1375340:CDS | 45.0% | |
| TTTCGTCCGGTTTACTAGGA+AGG | + | tig0019653:51021-51040 | Msa1375340:CDS | 45.0% | |
| CCCTTGGAGGATATTGTTAG+AGG | + | tig0019653:51098-51117 | Msa1375340:CDS | 45.0% | |
| CCCTCTAACAATATCCTCCA+AGG | - | tig0019653:51102-51121 | None:intergenic | 45.0% | |
| !! | AAGAGGTTGATGCAGTTCCT+GGG | + | tig0019653:51126-51145 | Msa1375340:CDS | 45.0% |
| TCAATTAACTCACACCTCCC+AGG | - | tig0019653:51146-51165 | None:intergenic | 45.0% | |
| GAGGTGTGAGTTAATTGACG+AGG | + | tig0019653:51148-51167 | Msa1375340:CDS | 45.0% | |
| TGACGAGGAACAAGCATTTG+GGG | + | tig0019653:51163-51182 | Msa1375340:CDS | 45.0% | |
| ! | ACAAGCATTTGGGGTCATAG+TGG | + | tig0019653:51172-51191 | Msa1375340:CDS | 45.0% |
| CAACCTCGCAGGATTATAAC+TGG | + | tig0019653:51251-51270 | Msa1375340:CDS | 45.0% | |
| TACATGGATCTTCACCCTTG+GGG | - | tig0019653:51568-51587 | None:intergenic | 45.0% | |
| CATACATGGATCTTCACCCT+TGG | - | tig0019653:51570-51589 | None:intergenic | 45.0% | |
| ! | TTTGGACGATATGTTGGCTG+GGG | + | tig0019653:51740-51759 | Msa1375340:CDS | 45.0% |
| CTGTGACCATTTGAAAGAGG+AGG | - | tig0019653:51816-51835 | None:intergenic | 45.0% | |
| CTCCTCTTTCAAATGGTCAC+AGG | + | tig0019653:51814-51833 | Msa1375340:CDS | 45.0% | |
| AGCCTGTGACCATTTGAAAG+AGG | - | tig0019653:51819-51838 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0019653:52355-52374 | Msa1375340:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0019653:52356-52375 | Msa1375340:intron | 45.0% |
| TCCACCAACGTTCAGTTTCA+TGG | + | tig0019653:52579-52598 | Msa1375340:intron | 45.0% | |
| TCCATGAAACTGAACGTTGG+TGG | - | tig0019653:52583-52602 | None:intergenic | 45.0% | |
| ACAGGGAAGTCAGCTTATCA+TGG | - | tig0019653:52644-52663 | None:intergenic | 45.0% | |
| TCCCTGTACCCCTTAAATGT+TGG | + | tig0019653:52657-52676 | Msa1375340:intron | 45.0% | |
| ! | CACTTTTATGTGCATGGTGC+AGG | + | tig0019653:53018-53037 | Msa1375340:intron | 45.0% |
| CACTGATACCAAAGGTTGCT+GGG | + | tig0019653:53351-53370 | Msa1375340:CDS | 45.0% | |
| ATTGTTAGCCCAGCAACCTT+TGG | - | tig0019653:53362-53381 | None:intergenic | 45.0% | |
| GTCAAAAGAAACGGGCCTTT+CGG | + | tig0019653:53424-53443 | Msa1375340:three_prime_UTR | 45.0% | |
| CGGAATCAATCTGGTGAAGA+TGG | + | tig0019653:53478-53497 | Msa1375340:three_prime_UTR | 45.0% | |
| TAAGCCAGGGGAAAAAAGGA+AGG | - | tig0019653:53620-53639 | None:intergenic | 45.0% | |
| CATGTAAGCCAGGGGAAAAA+AGG | - | tig0019653:53624-53643 | None:intergenic | 45.0% | |
| TTACAGTGGCATGTAAGCCA+GGG | - | tig0019653:53633-53652 | None:intergenic | 45.0% | |
| ATTACAGTGGCATGTAAGCC+AGG | - | tig0019653:53634-53653 | None:intergenic | 45.0% | |
| CTGAACTTGTCCAATCAAGC+AGG | + | tig0019653:53733-53752 | Msa1375340:three_prime_UTR | 45.0% | |
| AATCCCTGCATGTGAAAGCT+GGG | - | tig0019653:53812-53831 | None:intergenic | 45.0% | |
| AAATCCCTGCATGTGAAAGC+TGG | - | tig0019653:53813-53832 | None:intergenic | 45.0% | |
| ! | CACTTCTAGGAAAGATAGGC+TGG | - | tig0019653:53840-53859 | None:intergenic | 45.0% |
| GAAGAAGAAAGGGAGGTGAG+GGG | - | tig0019653:49408-49427 | None:intergenic | 50.0% | |
| CTGAAGAAGAAAGGGAGGTG+AGG | - | tig0019653:49410-49429 | None:intergenic | 50.0% | |
| GACGGGAAGGGAATTGAAGA+AGG | - | tig0019653:49546-49565 | None:intergenic | 50.0% | |
| GGATAACATAAGGGACGGGA+AGG | - | tig0019653:49559-49578 | None:intergenic | 50.0% | |
| AATCTTCGCCTACTTCGGGT+GGG | - | tig0019653:49654-49673 | None:intergenic | 50.0% | |
| AGCGGAATCTTCGCCTACTT+CGG | - | tig0019653:49659-49678 | None:intergenic | 50.0% | |
| ! | GTATTTGGTGAAGCCGTGAG+CGG | - | tig0019653:49677-49696 | None:intergenic | 50.0% |
| ! | CGGCTTGGAGTTGGATTTGT+TGG | - | tig0019653:49699-49718 | None:intergenic | 50.0% |
| GCCGAATAAATCGTCTTCGG+CGG | - | tig0019653:49830-49849 | None:intergenic | 50.0% | |
| ! | GAAGCGATGGGTTTACGTAC+CGG | + | tig0019653:50531-50550 | Msa1375340:CDS | 50.0% |
| ! | AAGCGATGGGTTTACGTACC+GGG | + | tig0019653:50532-50551 | Msa1375340:CDS | 50.0% |
| GGATTCGTCTTATGGGGTTC+TGG | + | tig0019653:50599-50618 | Msa1375340:CDS | 50.0% | |
| !!! | TGGGGTTCTGGATGCTGTTT+TGG | + | tig0019653:50611-50630 | Msa1375340:CDS | 50.0% |
| !!! | GTTTTTGAGGCTTCTTCGCG+CGG | + | tig0019653:50681-50700 | Msa1375340:CDS | 50.0% |
| GGCTCAGGGGAAATATGATG+AGG | + | tig0019653:50707-50726 | Msa1375340:CDS | 50.0% | |
| ! | TTTGATGGATGAGGAGGACG+AGG | + | tig0019653:50758-50777 | Msa1375340:CDS | 50.0% |
| GGAAGAGGATAGAGATGCGA+AGG | + | tig0019653:50779-50798 | Msa1375340:CDS | 50.0% | |
| ACAACTTTCCTATGCCGCTC+AGG | - | tig0019653:50831-50850 | None:intergenic | 50.0% | |
| ! | GAAACGAACAAAGGCGCACT+TGG | - | tig0019653:50867-50886 | None:intergenic | 50.0% |
| ATTCTTGCTGCTGTGGCAGT+TGG | + | tig0019653:51059-51078 | Msa1375340:CDS | 50.0% | |
| ! | TGGCAGTTGGCATTGCTGTT+GGG | + | tig0019653:51072-51091 | Msa1375340:CDS | 50.0% |
| !! | GAAGAGGTTGATGCAGTTCC+TGG | + | tig0019653:51125-51144 | Msa1375340:CDS | 50.0% |
| !! | GGGTCATAGTGGACTATGCT+CGG | + | tig0019653:51183-51202 | Msa1375340:CDS | 50.0% |
| TAAGAGAGCTTCAACCTCGC+AGG | + | tig0019653:51240-51259 | Msa1375340:CDS | 50.0% | |
| ! | AGTGATTGGTTGCTGTGGTG+AGG | + | tig0019653:51466-51485 | Msa1375340:intron | 50.0% |
| TTGCTGTGGTGAGGACGAAA+GGG | + | tig0019653:51475-51494 | Msa1375340:CDS | 50.0% | |
| ATCTTCACCCTTGGGGTTGT+CGG | - | tig0019653:51561-51580 | None:intergenic | 50.0% | |
| ! | ATATGTTGGCTGGGGTAGGA+TGG | + | tig0019653:51748-51767 | Msa1375340:CDS | 50.0% |
| CAGCTACCCTCCTAATGTCA+TGG | - | tig0019653:51848-51867 | None:intergenic | 50.0% | |
| TGTGCGAGCTTCAGTTGCAA+TGG | + | tig0019653:51866-51885 | Msa1375340:CDS | 50.0% | |
| GTGCGAGCTTCAGTTGCAAT+GGG | + | tig0019653:51867-51886 | Msa1375340:CDS | 50.0% | |
| TGCGAGCTTCAGTTGCAATG+GGG | + | tig0019653:51868-51887 | Msa1375340:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0019653:52357-52376 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0019653:52354-52373 | Msa1375340:intron | 50.0% |
| TGACCCCACTTAGTGGGATA+AGG | - | tig0019653:52362-52381 | None:intergenic | 50.0% | |
| TGAAGCTGACCCCACTTAGT+GGG | - | tig0019653:52368-52387 | None:intergenic | 50.0% | |
| ATGAAGCTGACCCCACTTAG+TGG | - | tig0019653:52369-52388 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTTCA+TGG | + | tig0019653:52368-52387 | Msa1375340:intron | 50.0% | |
| GTGCAGGTGATTGCTGGTAA+AGG | + | tig0019653:53034-53053 | Msa1375340:intron | 50.0% | |
| GTTGACGAGCTTCATCAAGC+TGG | + | tig0019653:53136-53155 | Msa1375340:CDS | 50.0% | |
| CTTTGGTATCAGTGGCTCTC+TGG | - | tig0019653:53345-53364 | None:intergenic | 50.0% | |
| CAGAGAGCCACTGATACCAA+AGG | + | tig0019653:53343-53362 | Msa1375340:CDS | 50.0% | |
| CCAGCAACCTTTGGTATCAG+TGG | - | tig0019653:53353-53372 | None:intergenic | 50.0% | |
| CCACTGATACCAAAGGTTGC+TGG | + | tig0019653:53350-53369 | Msa1375340:CDS | 50.0% | |
| ACGGGCCTTTCGGTTATGAT+AGG | + | tig0019653:53434-53453 | Msa1375340:three_prime_UTR | 50.0% | |
| CGGGCCTTTCGGTTATGATA+GGG | + | tig0019653:53435-53454 | Msa1375340:three_prime_UTR | 50.0% | |
| GGGCCTTTCGGTTATGATAG+GGG | + | tig0019653:53436-53455 | Msa1375340:three_prime_UTR | 50.0% | |
| AGGCCCCTATCATAACCGAA+AGG | - | tig0019653:53442-53461 | None:intergenic | 50.0% | |
| TGATAGGGGCCTTTCTTTGC+AGG | + | tig0019653:53450-53469 | Msa1375340:three_prime_UTR | 50.0% | |
| ! | GCCTTTCTTTGCAGGAGCAT+CGG | + | tig0019653:53458-53477 | Msa1375340:three_prime_UTR | 50.0% |
| TCCGATGCTCCTGCAAAGAA+AGG | - | tig0019653:53462-53481 | None:intergenic | 50.0% | |
| !! | CAGGAGCATCGGAATCAATC+TGG | + | tig0019653:53469-53488 | Msa1375340:three_prime_UTR | 50.0% |
| TACAGTGGCATGTAAGCCAG+GGG | - | tig0019653:53632-53651 | None:intergenic | 50.0% | |
| TACTCCCAGCTTTCACATGC+AGG | + | tig0019653:53805-53824 | Msa1375340:three_prime_UTR | 50.0% | |
| ACTCCCAGCTTTCACATGCA+GGG | + | tig0019653:53806-53825 | Msa1375340:three_prime_UTR | 50.0% | |
| GGAGGTGAGGGGTTTGTATG+GGG | - | tig0019653:49397-49416 | None:intergenic | 55.0% | |
| GGGAGGTGAGGGGTTTGTAT+GGG | - | tig0019653:49398-49417 | None:intergenic | 55.0% | |
| AGGGAGGTGAGGGGTTTGTA+TGG | - | tig0019653:49399-49418 | None:intergenic | 55.0% | |
| ! | GAATTTTCCGTCGGGTGCGA+TGG | - | tig0019653:49608-49627 | None:intergenic | 55.0% |
| GAATCTTCGCCTACTTCGGG+TGG | - | tig0019653:49655-49674 | None:intergenic | 55.0% | |
| GCGGAATCTTCGCCTACTTC+GGG | - | tig0019653:49658-49677 | None:intergenic | 55.0% | |
| GTAGGCGAAGATTCCGCTCA+CGG | + | tig0019653:49661-49680 | Msa1375340:CDS | 55.0% | |
| ! | ATCAGTGGCGGAAGGTTCGT+CGG | - | tig0019653:49806-49825 | None:intergenic | 55.0% |
| ATCGTCTTCGGCGGAATCAG+TGG | - | tig0019653:49821-49840 | None:intergenic | 55.0% | |
| !! | CAAGGATGGTGGATCCTGAG+CGG | + | tig0019653:50814-50833 | Msa1375340:CDS | 55.0% |
| GTGGCAGTTGGCATTGCTGT+TGG | + | tig0019653:51071-51090 | Msa1375340:CDS | 55.0% | |
| ! | GGCAGTTGGCATTGCTGTTG+GGG | + | tig0019653:51073-51092 | Msa1375340:CDS | 55.0% |
| !! | AGGTTGATGCAGTTCCTGGG+AGG | + | tig0019653:51129-51148 | Msa1375340:CDS | 55.0% |
| GTTGCTGTGGTGAGGACGAA+AGG | + | tig0019653:51474-51493 | Msa1375340:CDS | 55.0% | |
| TGCTGTGGTGAGGACGAAAG+GGG | + | tig0019653:51476-51495 | Msa1375340:CDS | 55.0% | |
| CTGACATCCGACAACCCCAA+GGG | + | tig0019653:51551-51570 | Msa1375340:CDS | 55.0% | |
| ! | GACGATATGTTGGCTGGGGT+AGG | + | tig0019653:51744-51763 | Msa1375340:CDS | 55.0% |
| GCGAGCTTCAGTTGCAATGG+GGG | + | tig0019653:51869-51888 | Msa1375340:CDS | 55.0% | |
| AGCTTCAGTTGCAATGGGGG+AGG | + | tig0019653:51872-51891 | Msa1375340:CDS | 55.0% | |
| TTCAGTTGCAATGGGGGAGG+AGG | + | tig0019653:51875-51894 | Msa1375340:CDS | 55.0% | |
| TCAGTTGCAATGGGGGAGGA+GGG | + | tig0019653:51876-51895 | Msa1375340:CDS | 55.0% | |
| GTCTCTACAGTTGCGCGCAA+AGG | - | tig0019653:52909-52928 | None:intergenic | 55.0% | |
| TGCATGGTGCAGGTGATTGC+TGG | + | tig0019653:53028-53047 | Msa1375340:intron | 55.0% | |
| ! | TCGATGACCGAGAAGAGTGC+AGG | + | tig0019653:53098-53117 | Msa1375340:CDS | 55.0% |
| ! | CGATGACCGAGAAGAGTGCA+GGG | + | tig0019653:53099-53118 | Msa1375340:CDS | 55.0% |
| AAGCCTCCCTGCACTCTTCT+CGG | - | tig0019653:53108-53127 | None:intergenic | 55.0% | |
| ACACGCTAGTCCTGCTTCCT+AGG | + | tig0019653:53676-53695 | Msa1375340:three_prime_UTR | 55.0% | |
| GGAGGGCGGAGAGGAAGTAA+GGG | - | tig0019653:49580-49599 | None:intergenic | 60.0% | |
| ! | TTTTCCGTCGGGTGCGATGG+CGG | - | tig0019653:49605-49624 | None:intergenic | 60.0% |
| CTTCTTCACGAAGGCGAGCG+CGG | - | tig0019653:49723-49742 | None:intergenic | 60.0% | |
| !! | AGGTTCGTCGGGAGCGTCTT+GGG | - | tig0019653:49794-49813 | None:intergenic | 60.0% |
| !! | AAGGTTCGTCGGGAGCGTCT+TGG | - | tig0019653:49795-49814 | None:intergenic | 60.0% |
| ! | TCAGTGGCGGAAGGTTCGTC+GGG | - | tig0019653:49805-49824 | None:intergenic | 60.0% |
| GTCTTCGGCGGAATCAGTGG+CGG | - | tig0019653:49818-49837 | None:intergenic | 60.0% | |
| TGAGGCTTCTTCGCGCGGAT+TGG | + | tig0019653:50686-50705 | Msa1375340:CDS | 60.0% | |
| !! | TTCTTCGCGCGGATTGGCTC+AGG | + | tig0019653:50692-50711 | Msa1375340:CDS | 60.0% |
| !! | TCTTCGCGCGGATTGGCTCA+GGG | + | tig0019653:50693-50712 | Msa1375340:CDS | 60.0% |
| GGATGAGGAGGACGAGGAAG+AGG | + | tig0019653:50764-50783 | Msa1375340:CDS | 60.0% | |
| ! | TGGTGGATCCTGAGCGGCAT+AGG | + | tig0019653:50820-50839 | Msa1375340:CDS | 60.0% |
| ! | CATTGCTGTTGGGGCACCCT+TGG | + | tig0019653:51082-51101 | Msa1375340:CDS | 60.0% |
| GCTGTGGTGAGGACGAAAGG+GGG | + | tig0019653:51477-51496 | Msa1375340:CDS | 60.0% | |
| GGGGTTGTCGGATGTCAGCA+TGG | - | tig0019653:51549-51568 | None:intergenic | 60.0% | |
| GCTGACATCCGACAACCCCA+AGG | + | tig0019653:51550-51569 | Msa1375340:CDS | 60.0% | |
| ! | TGACCGAGAAGAGTGCAGGG+AGG | + | tig0019653:53102-53121 | Msa1375340:CDS | 60.0% |
| GGGAGGGCGGAGAGGAAGTA+AGG | - | tig0019653:49581-49600 | None:intergenic | 65.0% | |
| GGGTCGTCGTCAGCTGGGTT+TGG | - | tig0019653:49634-49653 | None:intergenic | 65.0% | |
| GACGACGACCCACCCGAAGT+AGG | + | tig0019653:49643-49662 | Msa1375340:CDS | 65.0% | |
| TTCACGAAGGCGAGCGCGGT+CGG | - | tig0019653:49719-49738 | None:intergenic | 65.0% | |
| GTCTTGGGAGTCGGCGATGG+CGG | - | tig0019653:49779-49798 | None:intergenic | 65.0% | |
| AGCGTCTTGGGAGTCGGCGA+TGG | - | tig0019653:49782-49801 | None:intergenic | 65.0% | |
| !! | GTCGGGAGCGTCTTGGGAGT+CGG | - | tig0019653:49788-49807 | None:intergenic | 65.0% |
| ! | TCGGCGGAATCAGTGGCGGA+AGG | - | tig0019653:49814-49833 | None:intergenic | 65.0% |
| !! | CTTCGCGCGGATTGGCTCAG+GGG | + | tig0019653:50694-50713 | Msa1375340:CDS | 65.0% |
| ! | TGCTGTTGGGGCACCCTTGG+AGG | + | tig0019653:51085-51104 | Msa1375340:CDS | 65.0% |
| CGGGTGGGTCGTCGTCAGCT+GGG | - | tig0019653:49639-49658 | None:intergenic | 70.0% | |
| TCGGGTGGGTCGTCGTCAGC+TGG | - | tig0019653:49640-49659 | None:intergenic | 70.0% | |
| !! | GAGCGCGGTCGGCTTGGAGT+TGG | - | tig0019653:49708-49727 | None:intergenic | 70.0% |
| ! | GGCGATGGCGGCGAGGTAAG+TGG | - | tig0019653:49767-49786 | None:intergenic | 70.0% |
| ! | ATGGCGGAGGGAGGGCGGAG+AGG | - | tig0019653:49589-49608 | None:intergenic | 75.0% |
| !! | GTGCGATGGCGGAGGGAGGG+CGG | - | tig0019653:49594-49613 | None:intergenic | 75.0% |
| !! | CGGGTGCGATGGCGGAGGGA+GGG | - | tig0019653:49597-49616 | None:intergenic | 75.0% |
| !! | TCGGGTGCGATGGCGGAGGG+AGG | - | tig0019653:49598-49617 | None:intergenic | 75.0% |
| !! | CCGTCGGGTGCGATGGCGGA+GGG | - | tig0019653:49601-49620 | None:intergenic | 75.0% |
| CCCTCCGCCATCGCACCCGA+CGG | + | tig0019653:49598-49617 | Msa1375340:CDS | 75.0% | |
| ! | TCCGTCGGGTGCGATGGCGG+AGG | - | tig0019653:49602-49621 | None:intergenic | 75.0% |
| GAAGGCGAGCGCGGTCGGCT+TGG | - | tig0019653:49714-49733 | None:intergenic | 75.0% | |
| !! | GGGAGTCGGCGATGGCGGCG+AGG | - | tig0019653:49774-49793 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019653 | gene | 49383 | 53892 | 49383 | ID=Msa1375340;Name=Msa1375340 |
| tig0019653 | mRNA | 49383 | 53892 | 49383 | ID=Msa1375340-mRNA-1;Parent=Msa1375340;Name=Msa1375340-mRNA-1;_AED=0.01;_eAED=0.01;_QI=68|0.75|0.8|1|1|1|5|469|776 |
| tig0019653 | exon | 49383 | 51272 | 49383 | ID=Msa1375340-mRNA-1:exon:4417;Parent=Msa1375340-mRNA-1 |
| tig0019653 | exon | 51468 | 51584 | 51468 | ID=Msa1375340-mRNA-1:exon:4418;Parent=Msa1375340-mRNA-1 |
| tig0019653 | exon | 51733 | 51908 | 51733 | ID=Msa1375340-mRNA-1:exon:4419;Parent=Msa1375340-mRNA-1 |
| tig0019653 | exon | 53040 | 53169 | 53040 | ID=Msa1375340-mRNA-1:exon:4420;Parent=Msa1375340-mRNA-1 |
| tig0019653 | exon | 53338 | 53892 | 53338 | ID=Msa1375340-mRNA-1:exon:4421;Parent=Msa1375340-mRNA-1 |
| tig0019653 | five_prime_UTR | 49383 | 49450 | 49383 | ID=Msa1375340-mRNA-1:five_prime_utr;Parent=Msa1375340-mRNA-1 |
| tig0019653 | CDS | 49451 | 51272 | 49451 | ID=Msa1375340-mRNA-1:cds;Parent=Msa1375340-mRNA-1 |
| tig0019653 | CDS | 51468 | 51584 | 51468 | ID=Msa1375340-mRNA-1:cds;Parent=Msa1375340-mRNA-1 |
| tig0019653 | CDS | 51733 | 51908 | 51733 | ID=Msa1375340-mRNA-1:cds;Parent=Msa1375340-mRNA-1 |
| tig0019653 | CDS | 53040 | 53169 | 53040 | ID=Msa1375340-mRNA-1:cds;Parent=Msa1375340-mRNA-1 |
| tig0019653 | CDS | 53338 | 53423 | 53338 | ID=Msa1375340-mRNA-1:cds;Parent=Msa1375340-mRNA-1 |
| tig0019653 | three_prime_UTR | 53424 | 53892 | 53424 | ID=Msa1375340-mRNA-1:three_prime_utr;Parent=Msa1375340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
