AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0728540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0728540 MtrunA17_Chr5g0420861 99.115 791 7 0 1 791 1 791 0.0 1613
Msa0728540 MtrunA17_Chr5g0447581 68.947 731 209 5 60 780 65 787 0.0 1006
Msa0728540 MtrunA17_Chr1g0156731 45.493 710 334 13 79 746 75 773 0.0 596
Msa0728540 MtrunA17_Chr6g0469201 45.655 679 346 10 79 746 2 668 0.0 575
Msa0728540 MtrunA17_Chr5g0446951 46.165 678 343 10 79 746 2 667 0.0 565
Msa0728540 MtrunA17_Chr5g0446941 46.165 678 343 10 79 746 2 667 0.0 565
Msa0728540 MtrunA17_Chr1g0202601 42.504 687 346 11 73 746 1 651 7.49e-174 516
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0728540 AT2G04030.1 80.784 791 136 6 1 788 1 778 0.0 1272
Msa0728540 AT2G04030.2 80.405 791 136 7 1 788 1 775 0.0 1260
Msa0728540 AT3G07770.1 67.486 692 222 2 81 770 94 784 0.0 979
Msa0728540 AT3G07770.3 67.486 692 222 2 81 770 94 784 0.0 979
Msa0728540 AT3G07770.2 67.486 692 222 2 81 770 94 784 0.0 979
Msa0728540 AT4G24190.1 45.198 708 337 14 79 746 74 770 0.0 582
Msa0728540 AT4G24190.2 45.198 708 337 14 79 746 74 770 0.0 582
Msa0728540 AT5G52640.1 44.648 710 368 11 79 775 2 699 0.0 569
Msa0728540 AT5G56030.1 45.870 678 345 9 79 746 2 667 0.0 561
Msa0728540 AT5G56010.1 45.870 678 345 9 79 746 2 667 0.0 560
Msa0728540 AT5G56000.1 45.768 697 349 11 79 765 2 679 0.0 559
Msa0728540 AT5G56030.2 43.989 707 345 10 79 746 2 696 0.0 545

Find 225 sgRNAs with CRISPR-Local

Find 1032 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTATTCCATCATTCTTTA+AGG 0.122199 5_1:+33258631 Msa0728540:three_prime_UTR
TAAGAATTCATATGAAAATT+AGG 0.137008 5_1:-33258483 None:intergenic
CTTCACCAAACTCTGAATTT+TGG 0.185785 5_1:-33253462 None:intergenic
TTTCAGGAAAACAAGGATTT+AGG 0.189513 5_1:+33252844 Msa0728540:intron
GTTTGGTTGGTCTGCAAATA+TGG 0.205127 5_1:+33256710 Msa0728540:CDS
TTCAGGATTACAAGAAATTC+TGG 0.206275 5_1:+33255917 Msa0728540:intron
GGGAGTGAAAGAAGGGTTTA+TGG 0.228605 5_1:-33251060 None:intergenic
GAGTTAGGAAATAAGATTTA+TGG 0.240190 5_1:+33258196 Msa0728540:CDS
ATTATTGTAGGTTCTTTATT+TGG 0.240833 5_1:+33256349 Msa0728540:intron
AGCAAGGAAGATTTGGAATT+AGG 0.252547 5_1:+33256440 Msa0728540:CDS
TTTAAGTTCCTCCTCACTTT+TGG 0.253947 5_1:-33256028 None:intergenic
CATTCTATATATTCCAAGTA+TGG 0.268097 5_1:+33255005 Msa0728540:CDS
TATGAGAGGGAGGAGAATAT+TGG 0.268392 5_1:+33256881 Msa0728540:CDS
CCAACGAGACAAAGCCAATA+TGG 0.275323 5_1:+33254660 Msa0728540:CDS
AATGGATTGATTGGTCAATT+TGG 0.277371 5_1:+33252874 Msa0728540:CDS
TTCGGTTCTTCCCCTTCTTT+AGG 0.285961 5_1:-33254482 None:intergenic
CCTTCATTGCTTGGAGAGTC+TGG 0.287358 5_1:+33252503 Msa0728540:CDS
TGTGTAACAATATGCCTTAA+AGG 0.289891 5_1:+33258534 Msa0728540:three_prime_UTR
ACAATCAATGAGCTCTTCTT+TGG 0.310787 5_1:-33252679 None:intergenic
TACTGCAGTGATTCCGGTAT+TGG 0.320171 5_1:+33252651 Msa0728540:intron
GCCAACCAAAATTCAGAGTT+TGG 0.326105 5_1:+33253457 Msa0728540:CDS
TCTCCGTGTGTGCTTGTATC+TGG 0.326438 5_1:+33256684 Msa0728540:CDS
ACATATTGCTTATCTGATCT+AGG 0.328135 5_1:-33253044 None:intergenic
TGATATCAGCAAGGAAGATT+TGG 0.330709 5_1:+33256433 Msa0728540:CDS
CTTTGGTAGGTTTATTAAGT+TGG 0.332494 5_1:+33255945 Msa0728540:CDS
TCTTGCTGAAGGTGAAAATA+AGG 0.336218 5_1:+33255813 Msa0728540:CDS
AAGAATTCATATGAAAATTA+GGG 0.337233 5_1:-33258482 None:intergenic
CTGTTATACTGCAGTGATTC+CGG 0.337597 5_1:+33252645 Msa0728540:intron
TGGAATGATGGCGTTGGCCT+TGG 0.338594 5_1:+33258216 Msa0728540:CDS
TCTTGGAGACCAGGCAAGTT+TGG 0.340457 5_1:+33256854 Msa0728540:CDS
CTCTTTGCTTCGCTGCTGTC+GGG 0.358211 5_1:-33258018 None:intergenic
CTGCATTTCTTGTTGCTGAC+AGG 0.360508 5_1:+33252911 Msa0728540:CDS
GTGTTCTAAACCAGTGATAC+TGG 0.360915 5_1:-33258596 None:intergenic
TTTGGTAGGTTTATTAAGTT+GGG 0.363374 5_1:+33255946 Msa0728540:CDS
CCTGAGAGCCCTGCTGAGTT+AGG 0.369192 5_1:+33258181 Msa0728540:CDS
AATACAATCTACTTTGTGAT+TGG 0.370024 5_1:+33256601 Msa0728540:CDS
CAGTAATGCTAGTGATGCTT+TGG 0.373583 5_1:+33252451 Msa0728540:intron
TACACTTAAATCTTTGATGA+TGG 0.374941 5_1:-33256922 None:intergenic
TTACAATTCTGCTTTCTTGA+AGG 0.379506 5_1:-33255594 None:intergenic
GGAGCAGATAATGGATTGAT+TGG 0.390050 5_1:+33252865 Msa0728540:CDS
AAGGATTTAGGAGCAGATAA+TGG 0.393908 5_1:+33252856 Msa0728540:CDS
ACCTTCCTCTGAATGTTTCT+CGG 0.399635 5_1:+33255566 Msa0728540:CDS
CGTTGGCCTTGGGAGGAAGA+TGG 0.401195 5_1:+33258227 Msa0728540:CDS
ATCTTATTTCCTAACTCAGC+AGG 0.403298 5_1:-33258190 None:intergenic
CTTTCAACTTCCATTCCAAA+AGG 0.404163 5_1:+33251082 Msa0728540:five_prime_UTR
TAACTAATTCATGCTATTTG+AGG 0.408408 5_1:-33258395 None:intergenic
TCTCTTTGCTTCGCTGCTGT+CGG 0.410444 5_1:-33258019 None:intergenic
GTGCTTGTATCTGGAAAGTT+TGG 0.410530 5_1:+33256693 Msa0728540:CDS
AGACTAAAACTGAGAAGTAT+TGG 0.413237 5_1:+33254624 Msa0728540:CDS
TTCTTTGGTCATTCCAATAC+CGG 0.413238 5_1:-33252664 None:intergenic
GAAGAGCTCATTGATTGTCT+TGG 0.415254 5_1:+33252684 Msa0728540:CDS
TGGTGCATCTCCCTCTTCTT+CGG 0.415528 5_1:-33258257 None:intergenic
GCTGTCGGGAGCATTCTTGC+AGG 0.416007 5_1:-33258004 None:intergenic
GTGACTGAGCCTTCATTGCT+TGG 0.416910 5_1:+33252494 Msa0728540:CDS
GGAATGATGGCGTTGGCCTT+GGG 0.421539 5_1:+33258217 Msa0728540:CDS
CACACTAGTACCTCTGCTTT+CGG 0.423303 5_1:-33254500 None:intergenic
AACTAATTCATGCTATTTGA+GGG 0.424050 5_1:-33258394 None:intergenic
GACTAAAACTGAGAAGTATT+GGG 0.424911 5_1:+33254625 Msa0728540:CDS
TAGCTCAAACTAACCCATAT+TGG 0.425790 5_1:-33254674 None:intergenic
GTTGGCCTTGGGAGGAAGAT+GGG 0.425948 5_1:+33258228 Msa0728540:CDS
CCTAACTCAGCAGGGCTCTC+AGG 0.429345 5_1:-33258181 None:intergenic
GATCAGATAAGCAATATGTA+TGG 0.430427 5_1:+33253048 Msa0728540:CDS
TCTGAGGGTGGAAGAAGGTC+TGG 0.433676 5_1:-33251252 None:intergenic
TTGTTGAGAGGTCCCATACT+TGG 0.434018 5_1:-33255018 None:intergenic
ATAGCAGCTCTTATGTGATA+AGG 0.434828 5_1:+33253084 Msa0728540:CDS
AGAAGGGAGGGAAGTGAGAG+AGG 0.437121 5_1:-33251210 None:intergenic
TTAATGAAGGCACAGGCTCT+TGG 0.438153 5_1:+33256837 Msa0728540:CDS
ATAGTTCCATTGTCCGGATC+GGG 0.438784 5_1:-33252548 None:intergenic
TTCTACTCCTTAAAGAATGA+TGG 0.439138 5_1:-33258638 None:intergenic
AACTCATTGTACTCTTCCCT+TGG 0.439694 5_1:-33254820 None:intergenic
GAGGGAAGTGAGAGAGGCAG+TGG 0.443636 5_1:-33251204 None:intergenic
GTCAGTTGCTAGGTAATAGA+TGG 0.449439 5_1:-33256094 None:intergenic
TGCATTTCTTGTTGCTGACA+GGG 0.450892 5_1:+33252912 Msa0728540:CDS
TGAATGGCAACCTCGTCAAT+AGG 0.452397 5_1:-33256377 None:intergenic
CCATATTGGCTTTGTCTCGT+TGG 0.456120 5_1:-33254660 None:intergenic
CCTTCCTCTGAATGTTTCTC+GGG 0.460656 5_1:+33255567 Msa0728540:CDS
TCTTTGATGATGGGATGATC+TGG 0.461592 5_1:-33256912 None:intergenic
GTTGGTTCAGAAAGATATTG+AGG 0.463056 5_1:+33256155 Msa0728540:CDS
TGATCCTTGGACAACAGATT+AGG 0.464108 5_1:+33258354 Msa0728540:CDS
TAATGAGAAAGAGACTTGTC+AGG 0.465043 5_1:+33255767 Msa0728540:CDS
AGTGAAAAGGATGAGGAAGA+AGG 0.465045 5_1:-33251227 None:intergenic
TAGCAGCTCTTATGTGATAA+GGG 0.466973 5_1:+33253085 Msa0728540:CDS
TATTATTTGCAGATTAATGA+AGG 0.466979 5_1:+33256824 Msa0728540:intron
TTGATTGGTCAATTTGGTGT+TGG 0.468970 5_1:+33252880 Msa0728540:CDS
TGAAAATTGACAGGTGGAAG+AGG 0.469675 5_1:+33254451 Msa0728540:intron
CCAGACTCTCCAAGCAATGA+AGG 0.470969 5_1:-33252503 None:intergenic
AAGAAATTCTGGGAGAACTT+TGG 0.475005 5_1:+33255928 Msa0728540:CDS
TCAGGATTACAAGAAATTCT+GGG 0.479588 5_1:+33255918 Msa0728540:intron
AGAAGGTCTGGAGAGTGAAA+AGG 0.480495 5_1:-33251240 None:intergenic
GTGAAAAGGATGAGGAAGAA+GGG 0.480808 5_1:-33251226 None:intergenic
GCATACTGAGGCAGTAGGTA+AGG 0.482637 5_1:+33258444 Msa0728540:three_prime_UTR
TTGCTTGCACTGAATTCGTC+GGG 0.483950 5_1:+33258705 Msa0728540:three_prime_UTR
ACACTTAAATCTTTGATGAT+GGG 0.484183 5_1:-33256921 None:intergenic
AGTTGAAAGGGAGTGAAAGA+AGG 0.484387 5_1:-33251068 None:intergenic
GTTGCAGGTGAGCCGATTGA+TGG 0.484861 5_1:+33251550 Msa0728540:intron
GTAAAGTGGGTATATGCAAC+TGG 0.486230 5_1:-33254874 None:intergenic
AAGCGATTTCTGCGAGGTTG+CGG 0.486279 5_1:-33251290 None:intergenic
GTTTGGAGTTTATGAGAGGG+AGG 0.489842 5_1:+33256871 Msa0728540:CDS
AAGAAGGGTTTATGGAGATA+TGG 0.490695 5_1:-33251052 None:intergenic
AAGTAGATTGTATTCTTGCT+TGG 0.493811 5_1:-33256592 None:intergenic
TTGCAGATTAATGAAGGCAC+AGG 0.494082 5_1:+33256830 Msa0728540:intron
TGAACACACGCTTTACATAC+AGG 0.495574 5_1:-33255077 None:intergenic
TTTCCTTCCCCATCTATACA+TGG 0.496012 5_1:+33253501 Msa0728540:CDS
GTGATGCTTTGGACAAATTG+AGG 0.496062 5_1:+33252462 Msa0728540:CDS
ATAGTAATAGTTCCATTGTC+CGG 0.498704 5_1:-33252554 None:intergenic
GAGAATTCATACTTATCATC+CGG 0.501257 5_1:-33253431 None:intergenic
CAACGAGACAAAGCCAATAT+GGG 0.502441 5_1:+33254661 Msa0728540:CDS
GAACAATCAAATCCATCAAT+CGG 0.502821 5_1:-33251562 None:intergenic
AACTGAGAAGTATTGGGACT+GGG 0.506667 5_1:+33254631 Msa0728540:CDS
TCATGCTATTTGAGGGCTGA+AGG 0.509151 5_1:-33258387 None:intergenic
TTGTATCTGGAAAGTTTGGT+TGG 0.511487 5_1:+33256697 Msa0728540:CDS
CGATTTCTGCGAGGTTGCGG+TGG 0.513592 5_1:-33251287 None:intergenic
GGCACAGGCTCTTGGAGACC+AGG 0.514084 5_1:+33256845 Msa0728540:CDS
CACCATGACAGAAGACGAAC+CGG 0.514643 5_1:+33251338 Msa0728540:CDS
AACATACCTCAGTAGTAAAG+TGG 0.515214 5_1:-33254888 None:intergenic
GTATGTTTGTAGGTTCTGAA+TGG 0.515785 5_1:-33256393 None:intergenic
GGCCGGTTCGTCTTCTGTCA+TGG 0.516016 5_1:-33251340 None:intergenic
TCATAGCAGAAAATGATCCT+TGG 0.517559 5_1:+33258341 Msa0728540:CDS
ATTGTAGATGCGGAATTCAA+AGG 0.518011 5_1:+33254792 Msa0728540:intron
TCTGGAGAGTGAAAAGGATG+AGG 0.519034 5_1:-33251234 None:intergenic
AGGAAGAAGAACCTAAAGAA+GGG 0.520163 5_1:+33254471 Msa0728540:CDS
GGCTACGCTTCTGCTAAGCA+CGG 0.520245 5_1:-33251180 None:intergenic
GTGGGAGAAAAGCGCTTCTG+AGG 0.523107 5_1:-33251268 None:intergenic
AAATAAGATTTATGGAATGA+TGG 0.523709 5_1:+33258204 Msa0728540:CDS
AAATTGTGATCCAGTATCAC+TGG 0.524468 5_1:+33258586 Msa0728540:three_prime_UTR
CATATTGCTTATCTGATCTA+GGG 0.525906 5_1:-33253043 None:intergenic
GAGGAAGAAGAACCTAAAGA+AGG 0.526241 5_1:+33254470 Msa0728540:CDS
GCTACGCTTCTGCTAAGCAC+GGG 0.527048 5_1:-33251179 None:intergenic
AAAAGGATGAGGAAGAAGGG+AGG 0.529269 5_1:-33251223 None:intergenic
ACGTTACTTGAGCTTTGTGA+AGG 0.529581 5_1:+33255525 Msa0728540:CDS
ATGGTGTTTACACTTCAAAC+CGG 0.532291 5_1:-33251321 None:intergenic
GTTGAAAGGGAGTGAAAGAA+GGG 0.533100 5_1:-33251067 None:intergenic
GATTCGCATCAAGCCCGATC+CGG 0.535202 5_1:+33252535 Msa0728540:CDS
AAAGGATGAGGAAGAAGGGA+GGG 0.536787 5_1:-33251222 None:intergenic
AAACTGAGAAGTATTGGGAC+TGG 0.537001 5_1:+33254630 Msa0728540:CDS
TATGAATTCTTAATGCTGAA+AGG 0.537471 5_1:+33258494 Msa0728540:three_prime_UTR
ACTACTTCTTCATTGTTGAG+AGG 0.538916 5_1:-33255030 None:intergenic
TCATAAACTCCAAACTTGCC+TGG 0.539665 5_1:-33256863 None:intergenic
ATTCTATATATTCCAAGTAT+GGG 0.541983 5_1:+33255006 Msa0728540:CDS
TTTCAACTTCCATTCCAAAA+GGG 0.543056 5_1:+33251083 Msa0728540:five_prime_UTR
TCTCTCAGGTGACGAGGATG+AGG 0.546857 5_1:+33256554 Msa0728540:intron
AATTCTGGGAGAACTTTGGT+AGG 0.548002 5_1:+33255932 Msa0728540:CDS
ATGGGGTAGAACCGAAGAAG+AGG 0.549660 5_1:+33258246 Msa0728540:CDS
TTTATTGGGAAAGGCCCCAC+AGG 0.552989 5_1:-33258565 None:intergenic
CTTGAGCTTTGTGAAGGGTG+TGG 0.553401 5_1:+33255531 Msa0728540:CDS
GTTGGTCTGCAAATATGGAA+AGG 0.554148 5_1:+33256715 Msa0728540:CDS
TTAAAGGAGCAAAATCCTGT+GGG 0.557248 5_1:+33258550 Msa0728540:three_prime_UTR
CAAGTTTGGAGTTTATGAGA+GGG 0.558343 5_1:+33256868 Msa0728540:CDS
TTGAATATTTCAGGAAAACA+AGG 0.558551 5_1:+33252837 Msa0728540:intron
GATTTATGGAATGATGGCGT+TGG 0.559519 5_1:+33258210 Msa0728540:CDS
AATAGTTCCATTGTCCGGAT+CGG 0.561535 5_1:-33252549 None:intergenic
GATACAGCACAAATTTCTAG+TGG 0.562445 5_1:+33258060 Msa0728540:CDS
ATCAGATAAGCAATATGTAT+GGG 0.563498 5_1:+33253049 Msa0728540:CDS
CGTTACTTGAGCTTTGTGAA+GGG 0.565589 5_1:+33255526 Msa0728540:CDS
ATGCTATTTGAGGGCTGAAG+GGG 0.567109 5_1:-33258385 None:intergenic
GTTGCTTGCACTGAATTCGT+CGG 0.567608 5_1:+33258704 Msa0728540:three_prime_UTR
GGAAGTGAGAGAGGCAGTGG+CGG 0.568518 5_1:-33251201 None:intergenic
ATACTCAAACTTCTCACCAC+TGG 0.568963 5_1:-33251408 None:intergenic
GCGCTTCTGAGGGTGGAAGA+AGG 0.570354 5_1:-33251257 None:intergenic
GCAGTAGGTAAGGAGAGGGA+GGG 0.575937 5_1:+33258454 Msa0728540:three_prime_UTR
TCTTATTTCCTAACTCAGCA+GGG 0.577132 5_1:-33258189 None:intergenic
CATGCTATTTGAGGGCTGAA+GGG 0.578476 5_1:-33258386 None:intergenic
CCCGAGAAACATTCAGAGGA+AGG 0.578609 5_1:-33255567 None:intergenic
ATCAAGCCCGATCCGGACAA+TGG 0.579398 5_1:+33252542 Msa0728540:CDS
GCAAGTTTGGAGTTTATGAG+AGG 0.585377 5_1:+33256867 Msa0728540:CDS
TCTACCCCATCTTCCTCCCA+AGG 0.585518 5_1:-33258233 None:intergenic
GATTTCTGCGAGGTTGCGGT+GGG 0.587653 5_1:-33251286 None:intergenic
GGCAGTAGGTAAGGAGAGGG+AGG 0.587910 5_1:+33258453 Msa0728540:three_prime_UTR
CCGACTTTCTGTCCGTTGTG+AGG 0.590029 5_1:+33251361 Msa0728540:CDS
TTGGCCTTGGGAGGAAGATG+GGG 0.591270 5_1:+33258229 Msa0728540:CDS
GAGAAAAGCGCTTCTGAGGG+TGG 0.593555 5_1:-33251264 None:intergenic
TGGGGTAGAACCGAAGAAGA+GGG 0.596304 5_1:+33258247 Msa0728540:CDS
TGAGGCAGTAGGTAAGGAGA+GGG 0.596903 5_1:+33258450 Msa0728540:three_prime_UTR
AGATGAGTATGTTGAAAACA+TGG 0.598251 5_1:+33256056 Msa0728540:CDS
TGGGAGAAAAGCGCTTCTGA+GGG 0.599334 5_1:-33251267 None:intergenic
ACAACAGCTCGGTGATAATG+TGG 0.599525 5_1:+33256629 Msa0728540:CDS
GACACCTAATCTGTTGTCCA+AGG 0.601252 5_1:-33258358 None:intergenic
AGAGGGAGATGCACCAGCAG+AGG 0.602555 5_1:+33258264 Msa0728540:CDS
ATGATGGCGTTGGCCTTGGG+AGG 0.606240 5_1:+33258220 Msa0728540:CDS
TGCTGTTGCTGAGAAAGAAG+AGG 0.608121 5_1:+33251385 Msa0728540:CDS
TTGCCATGTATAGATGGGGA+AGG 0.611163 5_1:-33253504 None:intergenic
GTTTATGGAGATATGGCGGA+TGG 0.611778 5_1:-33251045 None:intergenic
GGAAGAAGAACCTAAAGAAG+GGG 0.614512 5_1:+33254472 Msa0728540:CDS
GTGTTTACACTTCAAACCGG+TGG 0.616034 5_1:-33251318 None:intergenic
CGAGGATGAGGTCAAAGAGA+GGG 0.617954 5_1:+33256566 Msa0728540:CDS
AAGGGTTTATGGAGATATGG+CGG 0.618255 5_1:-33251049 None:intergenic
GAAATTTGTTGATATCAGCA+AGG 0.619686 5_1:+33256424 Msa0728540:CDS
TTACACTTCCAAAAGTGAGG+AGG 0.622795 5_1:+33256020 Msa0728540:CDS
CTGAGGCAGTAGGTAAGGAG+AGG 0.624361 5_1:+33258449 Msa0728540:three_prime_UTR
TTCACAAAGCTCAAGTAACG+TGG 0.625266 5_1:-33255523 None:intergenic
GGAATTCAAAGGATACTCCA+AGG 0.627935 5_1:+33254803 Msa0728540:CDS
TTTCTTGCCATGTATAGATG+GGG 0.628271 5_1:-33253508 None:intergenic
CTTAAAGGAGCAAAATCCTG+TGG 0.630988 5_1:+33258549 Msa0728540:three_prime_UTR
ACATACCTCAGTAGTAAAGT+GGG 0.633434 5_1:-33254887 None:intergenic
ACGAGGATGAGGTCAAAGAG+AGG 0.635134 5_1:+33256565 Msa0728540:CDS
GTGAGGCATACTGAGGCAGT+AGG 0.635700 5_1:+33258439 Msa0728540:three_prime_UTR
AGGGGAAGAACCGAAAGCAG+AGG 0.636366 5_1:+33254490 Msa0728540:CDS
TTTGGTTGATCCTATTGACG+AGG 0.639287 5_1:+33256367 Msa0728540:CDS
TGCTGAAGGTGAAAATAAGG+AGG 0.643210 5_1:+33255816 Msa0728540:CDS
AAAATTTCTCTCAGGTGACG+AGG 0.643353 5_1:+33256548 Msa0728540:intron
CCTCACAACGGACAGAAAGT+CGG 0.647717 5_1:-33251361 None:intergenic
GAATTCAAAGGATACTCCAA+GGG 0.650014 5_1:+33254804 Msa0728540:CDS
GAAGTTTGAGTATCAAGCCG+AGG 0.655046 5_1:+33251418 Msa0728540:CDS
TATTAAGTTGGGATGCATCG+AGG 0.656340 5_1:+33255957 Msa0728540:CDS
ACACCTCACTCACTCAACAA+TGG 0.658740 5_1:+33251154 Msa0728540:exon
GATGAGTATGTTGAAAACAT+GGG 0.659789 5_1:+33256057 Msa0728540:CDS
GAGCCATTGTTGAGTGAGTG+AGG 0.663520 5_1:-33251157 None:intergenic
TTTCCAGATACAAGCACACA+CGG 0.663653 5_1:-33256687 None:intergenic
TTGGGATGCATCGAGGACAG+TGG 0.664024 5_1:+33255964 Msa0728540:CDS
ACAACGGACAGAAAGTCGGC+CGG 0.668753 5_1:-33251357 None:intergenic
CTTGGAACTATTGCTCAGAG+TGG 0.669561 5_1:+33252702 Msa0728540:CDS
ATGATTCAAGATCTTGCTGA+AGG 0.670106 5_1:+33255802 Msa0728540:CDS
ATATACCCACTTTACTACTG+AGG 0.672691 5_1:+33254882 Msa0728540:CDS
ATCTCCCGAGAAACATTCAG+AGG 0.674198 5_1:-33255571 None:intergenic
AAAAGAAAGTGAAAGTACAG+AGG 0.676881 5_1:+33258294 Msa0728540:CDS
GAAGTGTAAAATCTCAACAG+TGG 0.677264 5_1:-33256006 None:intergenic
TCACAGTCTGTATAGTCACA+AGG 0.681780 5_1:+33251583 Msa0728540:CDS
CAGCAACAGCAGCCTCACAA+CGG 0.696980 5_1:-33251373 None:intergenic
GATTGGATAAAACAACAGCT+CGG 0.697478 5_1:+33256618 Msa0728540:CDS
GAAGAAAAGCGATTTCTGCG+AGG 0.704811 5_1:-33251296 None:intergenic
TAAAGGAGCAAAATCCTGTG+GGG 0.727418 5_1:+33258551 Msa0728540:three_prime_UTR
ATAGTGAGTGAGGCATACTG+AGG 0.735350 5_1:+33258432 Msa0728540:three_prime_UTR
GCTGAGAAAGAAGAGGCCAG+TGG 0.774514 5_1:+33251392 Msa0728540:CDS
CCTGAAAAGCTTCTACACCG+TGG 0.783183 5_1:+33253119 Msa0728540:CDS
GAAGTGTAATCTGTGTACCA+CGG 0.784737 5_1:-33253136 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGTTTTATTGTTTTTTT+TGG + chr5_1:33252424-33252443 Msa0728540:intron 10.0%
!!! ATTCTATTTTGTTTTTTTTA+GGG + chr5_1:33252602-33252621 Msa0728540:intron 10.0%
!! ATAGATAAAATAATATATCA+TGG - chr5_1:33255191-33255210 None:intergenic 10.0%
!! AAAACAAAAAATTTATACAA+GGG - chr5_1:33257925-33257944 None:intergenic 10.0%
!! TAAAACAAAAAATTTATACA+AGG - chr5_1:33257926-33257945 None:intergenic 10.0%
!! AAAACAAAAAATTTATACAA+GGG - chr5_1:33257925-33257944 None:intergenic 10.0%
!! AAAAACAAAAAATTTATACA+AGG - chr5_1:33257976-33257995 None:intergenic 10.0%
!!! TTATGTTTTATTGTTTTTTT+TGG + chr5_1:33252424-33252443 Msa0728540:intron 10.0%
!!! ATTCTATTTTGTTTTTTTTA+GGG + chr5_1:33252602-33252621 Msa0728540:intron 10.0%
!! ATAGATAAAATAATATATCA+TGG - chr5_1:33255191-33255210 None:intergenic 10.0%
!! AAAACAAAAAATTTATACAA+GGG - chr5_1:33257925-33257944 None:intergenic 10.0%
!! TAAAACAAAAAATTTATACA+AGG - chr5_1:33257926-33257945 None:intergenic 10.0%
!! AAAACAAAAAATTTATACAA+GGG - chr5_1:33257925-33257944 None:intergenic 10.0%
!! AAAAACAAAAAATTTATACA+AGG - chr5_1:33257976-33257995 None:intergenic 10.0%
!!! ATGTAAAATGATTTTATGTT+TGG + chr5_1:33251766-33251785 Msa0728540:intron 15.0%
!! TGGATTTAACAATAAATTTA+AGG + chr5_1:33251807-33251826 Msa0728540:intron 15.0%
!!! GATTCTATTTTGTTTTTTTT+AGG + chr5_1:33252601-33252620 Msa0728540:intron 15.0%
!! AATTAACTTAATAAATCTTG+AGG - chr5_1:33253359-33253378 None:intergenic 15.0%
!!! TGATTTATTATTGATAATGA+TGG + chr5_1:33253644-33253663 Msa0728540:intron 15.0%
!!! TAATTAATTTGAAAATTGAC+AGG + chr5_1:33254442-33254461 Msa0728540:intron 15.0%
!!! CATGAATTAGTTATTATTTT+TGG + chr5_1:33258405-33258424 Msa0728540:three_prime_UTR 15.0%
!! AAGAATTCATATGAAAATTA+GGG - chr5_1:33258485-33258504 None:intergenic 15.0%
!! TAAGAATTCATATGAAAATT+AGG - chr5_1:33258486-33258505 None:intergenic 15.0%
!!! ATGTAAAATGATTTTATGTT+TGG + chr5_1:33251766-33251785 Msa0728540:intron 15.0%
!! TGGATTTAACAATAAATTTA+AGG + chr5_1:33251807-33251826 Msa0728540:intron 15.0%
!!! GATTCTATTTTGTTTTTTTT+AGG + chr5_1:33252601-33252620 Msa0728540:intron 15.0%
!! AATTAACTTAATAAATCTTG+AGG - chr5_1:33253359-33253378 None:intergenic 15.0%
!!! TGATTTATTATTGATAATGA+TGG + chr5_1:33253644-33253663 Msa0728540:intron 15.0%
!!! TAATTAATTTGAAAATTGAC+AGG + chr5_1:33254442-33254461 Msa0728540:intron 15.0%
!!! CATGAATTAGTTATTATTTT+TGG + chr5_1:33258405-33258424 Msa0728540:three_prime_UTR 15.0%
!! AAGAATTCATATGAAAATTA+GGG - chr5_1:33258485-33258504 None:intergenic 15.0%
!! TAAGAATTCATATGAAAATT+AGG - chr5_1:33258486-33258505 None:intergenic 15.0%
!!! TTTATTTGCATAATTGATTC+TGG + chr5_1:33251728-33251747 Msa0728540:intron 20.0%
!!! GGATTTATTTTTTGTAATTG+TGG + chr5_1:33251787-33251806 Msa0728540:intron 20.0%
!! AGAGTAAAAATTAATTCTAG+AGG - chr5_1:33252106-33252125 None:intergenic 20.0%
!!! TTATTATTAACTCTGTTTTG+TGG + chr5_1:33252339-33252358 Msa0728540:intron 20.0%
!!! GATTTTTCTTTGAATATTTC+AGG + chr5_1:33252828-33252847 Msa0728540:intron 20.0%
!!! TCTGATTTTTTGTAATTGAT+TGG + chr5_1:33252977-33252996 Msa0728540:intron 20.0%
!!! TTAAAGCTAAATTGTACTTT+TGG + chr5_1:33253771-33253790 Msa0728540:intron 20.0%
!! GAAACCTAAAATAAAGATAA+GGG - chr5_1:33253798-33253817 None:intergenic 20.0%
!! TGAAACCTAAAATAAAGATA+AGG - chr5_1:33253799-33253818 None:intergenic 20.0%
!!! CTTTATTTTAGGTTTCAATT+TGG + chr5_1:33253802-33253821 Msa0728540:intron 20.0%
!! AGTATAACTTCAAAAATAAG+TGG - chr5_1:33253839-33253858 None:intergenic 20.0%
!!! TTTTTGAAGTTATACTAATG+CGG + chr5_1:33253843-33253862 Msa0728540:intron 20.0%
!! TTATAACTGCAGTAATATAA+AGG + chr5_1:33253962-33253981 Msa0728540:intron 20.0%
!!! CTTCATTTTAAGTTTCAATT+TGG - chr5_1:33254018-33254037 None:intergenic 20.0%
!! TGAAACTTAAAATGAAGATA+AGG + chr5_1:33254021-33254040 Msa0728540:intron 20.0%
!! GAAACTTAAAATGAAGATAA+GGG + chr5_1:33254022-33254041 Msa0728540:intron 20.0%
!! AAACTTAAAATGAAGATAAG+GGG + chr5_1:33254023-33254042 Msa0728540:intron 20.0%
!! AAAAAGCAGACTAATAATTA+GGG - chr5_1:33254124-33254143 None:intergenic 20.0%
!! TAAAAAGCAGACTAATAATT+AGG - chr5_1:33254125-33254144 None:intergenic 20.0%
!!! TTGATAACACATATGAAAAA+CGG - chr5_1:33254553-33254572 None:intergenic 20.0%
!!! AAAGACTTTTAATGAATTCT+TGG + chr5_1:33254849-33254868 Msa0728540:CDS 20.0%
!! ATTCTATATATTCCAAGTAT+GGG + chr5_1:33255006-33255025 Msa0728540:CDS 20.0%
!!! TCTTGCTCATTTTTTTTATT+TGG - chr5_1:33255391-33255410 None:intergenic 20.0%
!! AATTTGTGCATATTATATTG+AGG + chr5_1:33256216-33256235 Msa0728540:intron 20.0%
!! GTATTCAGTTAGAAATATAT+AGG - chr5_1:33256289-33256308 None:intergenic 20.0%
!! ATTATTGTAGGTTCTTTATT+TGG + chr5_1:33256349-33256368 Msa0728540:intron 20.0%
!!! TTTATCATTCTAGTTGTATA+AGG + chr5_1:33256781-33256800 Msa0728540:intron 20.0%
!! TATTATTTGCAGATTAATGA+AGG + chr5_1:33256824-33256843 Msa0728540:intron 20.0%
!! TTGTCAAATTGTTCTTAAAA+AGG + chr5_1:33257263-33257282 Msa0728540:intron 20.0%
!! TTCTTAAAAAGGTTTAAACT+TGG + chr5_1:33257274-33257293 Msa0728540:intron 20.0%
!!! ATGATTTGTTTTTTTGTCAA+TGG + chr5_1:33257804-33257823 Msa0728540:intron 20.0%
!! AAATAAGATTTATGGAATGA+TGG + chr5_1:33258204-33258223 Msa0728540:CDS 20.0%
!!! TTTATTTGCATAATTGATTC+TGG + chr5_1:33251728-33251747 Msa0728540:intron 20.0%
!!! GGATTTATTTTTTGTAATTG+TGG + chr5_1:33251787-33251806 Msa0728540:intron 20.0%
!! AGAGTAAAAATTAATTCTAG+AGG - chr5_1:33252106-33252125 None:intergenic 20.0%
!!! TTATTATTAACTCTGTTTTG+TGG + chr5_1:33252339-33252358 Msa0728540:intron 20.0%
!!! GATTTTTCTTTGAATATTTC+AGG + chr5_1:33252828-33252847 Msa0728540:intron 20.0%
!!! TCTGATTTTTTGTAATTGAT+TGG + chr5_1:33252977-33252996 Msa0728540:intron 20.0%
!!! TTAAAGCTAAATTGTACTTT+TGG + chr5_1:33253771-33253790 Msa0728540:intron 20.0%
!! GAAACCTAAAATAAAGATAA+GGG - chr5_1:33253798-33253817 None:intergenic 20.0%
!! TGAAACCTAAAATAAAGATA+AGG - chr5_1:33253799-33253818 None:intergenic 20.0%
!!! CTTTATTTTAGGTTTCAATT+TGG + chr5_1:33253802-33253821 Msa0728540:intron 20.0%
!! AGTATAACTTCAAAAATAAG+TGG - chr5_1:33253839-33253858 None:intergenic 20.0%
!!! TTTTTGAAGTTATACTAATG+CGG + chr5_1:33253843-33253862 Msa0728540:intron 20.0%
!! TTATAACTGCAGTAATATAA+AGG + chr5_1:33253962-33253981 Msa0728540:intron 20.0%
!!! CTTCATTTTAAGTTTCAATT+TGG - chr5_1:33254018-33254037 None:intergenic 20.0%
!! TGAAACTTAAAATGAAGATA+AGG + chr5_1:33254021-33254040 Msa0728540:intron 20.0%
!! GAAACTTAAAATGAAGATAA+GGG + chr5_1:33254022-33254041 Msa0728540:intron 20.0%
!! AAACTTAAAATGAAGATAAG+GGG + chr5_1:33254023-33254042 Msa0728540:intron 20.0%
!! AAAAAGCAGACTAATAATTA+GGG - chr5_1:33254124-33254143 None:intergenic 20.0%
!! TAAAAAGCAGACTAATAATT+AGG - chr5_1:33254125-33254144 None:intergenic 20.0%
!!! TTGATAACACATATGAAAAA+CGG - chr5_1:33254553-33254572 None:intergenic 20.0%
!!! AAAGACTTTTAATGAATTCT+TGG + chr5_1:33254849-33254868 Msa0728540:CDS 20.0%
!! ATTCTATATATTCCAAGTAT+GGG + chr5_1:33255006-33255025 Msa0728540:CDS 20.0%
!!! TCTTGCTCATTTTTTTTATT+TGG - chr5_1:33255391-33255410 None:intergenic 20.0%
!! AATTTGTGCATATTATATTG+AGG + chr5_1:33256216-33256235 Msa0728540:intron 20.0%
!! GTATTCAGTTAGAAATATAT+AGG - chr5_1:33256289-33256308 None:intergenic 20.0%
!! ATTATTGTAGGTTCTTTATT+TGG + chr5_1:33256349-33256368 Msa0728540:intron 20.0%
!!! TTTATCATTCTAGTTGTATA+AGG + chr5_1:33256781-33256800 Msa0728540:intron 20.0%
!! TATTATTTGCAGATTAATGA+AGG + chr5_1:33256824-33256843 Msa0728540:intron 20.0%
!! TTGTCAAATTGTTCTTAAAA+AGG + chr5_1:33257263-33257282 Msa0728540:intron 20.0%
!! TTCTTAAAAAGGTTTAAACT+TGG + chr5_1:33257274-33257293 Msa0728540:intron 20.0%
!!! ATGATTTGTTTTTTTGTCAA+TGG + chr5_1:33257804-33257823 Msa0728540:intron 20.0%
!! AAATAAGATTTATGGAATGA+TGG + chr5_1:33258204-33258223 Msa0728540:CDS 20.0%
!! AATGAAATGAAAAACCCTTT+TGG - chr5_1:33251100-33251119 None:intergenic 25.0%
! GATTGTGAATTGAATTGAAA+GGG + chr5_1:33251499-33251518 Msa0728540:intron 25.0%
! AAATCAGTGTAAGCATAAAA+TGG - chr5_1:33251654-33251673 None:intergenic 25.0%
!!! AATGTGTTTGGTTTCAATTT+TGG - chr5_1:33251969-33251988 None:intergenic 25.0%
! TTGAAACCAAACACATTTAA+TGG + chr5_1:33251972-33251991 Msa0728540:intron 25.0%
! GTAAAACCATTAAATGTGTT+TGG - chr5_1:33251981-33252000 None:intergenic 25.0%
!! AGAGTAAAAATTGATTCTAG+AGG - chr5_1:33252266-33252285 None:intergenic 25.0%
!!! TTTGTTTTTTTTAGGGAATG+TGG + chr5_1:33252609-33252628 Msa0728540:intron 25.0%
! TTGAATATTTCAGGAAAACA+AGG + chr5_1:33252837-33252856 Msa0728540:intron 25.0%
! TGATTGGATATATCTGTAAA+TGG + chr5_1:33252993-33253012 Msa0728540:intron 25.0%
! TATATCTGTAAATGGAAAAC+AGG + chr5_1:33253001-33253020 Msa0728540:intron 25.0%
! ATCAGATAAGCAATATGTAT+GGG + chr5_1:33253049-33253068 Msa0728540:CDS 25.0%
! TGACAATAAAAGAACAAATG+GGG - chr5_1:33253687-33253706 None:intergenic 25.0%
! CTGACAATAAAAGAACAAAT+GGG - chr5_1:33253688-33253707 None:intergenic 25.0%
! ACTGACAATAAAAGAACAAA+TGG - chr5_1:33253689-33253708 None:intergenic 25.0%
!! CTCTAACTTTTACAAAATAC+AGG + chr5_1:33253906-33253925 Msa0728540:intron 25.0%
!!! ACCATTTTAGAACAAAAAAG+AGG + chr5_1:33253929-33253948 Msa0728540:intron 25.0%
!!! CCATTTTAGAACAAAAAAGA+GGG + chr5_1:33253930-33253949 Msa0728540:intron 25.0%
!!! CATTTTAGAACAAAAAAGAG+GGG + chr5_1:33253931-33253950 Msa0728540:intron 25.0%
!! AGTAATATAAAGGCTCATTT+TGG + chr5_1:33253972-33253991 Msa0728540:intron 25.0%
! TTTGGTACCAAAAATATAAG+AGG + chr5_1:33253990-33254009 Msa0728540:intron 25.0%
! TTGGTACCAAAAATATAAGA+GGG + chr5_1:33253991-33254010 Msa0728540:intron 25.0%
!! AAAATGAGGGTACAATATTT+AGG - chr5_1:33254049-33254068 None:intergenic 25.0%
!!! ATTGTACCCTCATTTTAATT+AGG + chr5_1:33254053-33254072 Msa0728540:intron 25.0%
! GTAGAACCTAATTAAAATGA+GGG - chr5_1:33254062-33254081 None:intergenic 25.0%
! TGTAGAACCTAATTAAAATG+AGG - chr5_1:33254063-33254082 None:intergenic 25.0%
!!! TAGTCTGCTTTTTAATGATT+TGG + chr5_1:33254131-33254150 Msa0728540:intron 25.0%
!! AAATTTGTTTCCATCTTGAA+AGG + chr5_1:33254221-33254240 Msa0728540:intron 25.0%
!! AATTTGTTTCCATCTTGAAA+GGG + chr5_1:33254222-33254241 Msa0728540:intron 25.0%
!! TTAATTTGAAAATTGACAGG+TGG + chr5_1:33254445-33254464 Msa0728540:intron 25.0%
! TTTCAACTTAATTGTAGATG+CGG + chr5_1:33254782-33254801 Msa0728540:intron 25.0%
! CATTCTATATATTCCAAGTA+TGG + chr5_1:33255005-33255024 Msa0728540:CDS 25.0%
!! TCTATTTAAAACATTCTTCG+CGG + chr5_1:33255206-33255225 Msa0728540:intron 25.0%
! ATCAATTATACATTTACGAG+AGG - chr5_1:33255270-33255289 None:intergenic 25.0%
! ACATTAGCACAAAACATTAT+GGG - chr5_1:33255729-33255748 None:intergenic 25.0%
! AACATTAGCACAAAACATTA+TGG - chr5_1:33255730-33255749 None:intergenic 25.0%
!! TAATGTTGTAATTTCAGGTA+AGG + chr5_1:33255743-33255762 Msa0728540:intron 25.0%
! TTTGGTAGGTTTATTAAGTT+GGG + chr5_1:33255946-33255965 Msa0728540:CDS 25.0%
!! TCTTTTCTTTGTATGTTTGT+AGG - chr5_1:33256406-33256425 None:intergenic 25.0%
! AATACAATCTACTTTGTGAT+TGG + chr5_1:33256601-33256620 Msa0728540:CDS 25.0%
!! ACACTTAAATCTTTGATGAT+GGG - chr5_1:33256924-33256943 None:intergenic 25.0%
! TACACTTAAATCTTTGATGA+TGG - chr5_1:33256925-33256944 None:intergenic 25.0%
! GTAAGTTCACATTATTAGTT+TGG + chr5_1:33256942-33256961 Msa0728540:intron 25.0%
! TTAAACTTGGATGATATTTG+TGG + chr5_1:33257287-33257306 Msa0728540:intron 25.0%
! GGGTAAATTAATAAGAGTAA+TGG - chr5_1:33257558-33257577 None:intergenic 25.0%
! AATTTACCCTATACAATAGT+TGG + chr5_1:33257569-33257588 Msa0728540:intron 25.0%
!! CCTCTATTGTACAATTTTAA+AGG - chr5_1:33257851-33257870 None:intergenic 25.0%
!!! CCTTTAAAATTGTACAATAG+AGG + chr5_1:33257848-33257867 Msa0728540:intron 25.0%
! GAGTTAGGAAATAAGATTTA+TGG + chr5_1:33258196-33258215 Msa0728540:CDS 25.0%
!! AACTAATTCATGCTATTTGA+GGG - chr5_1:33258397-33258416 None:intergenic 25.0%
!! TAACTAATTCATGCTATTTG+AGG - chr5_1:33258398-33258417 None:intergenic 25.0%
! TATGAATTCTTAATGCTGAA+AGG + chr5_1:33258494-33258513 Msa0728540:three_prime_UTR 25.0%
!! TACTGGATCACAATTTTATT+GGG - chr5_1:33258582-33258601 None:intergenic 25.0%
!! ATACTGGATCACAATTTTAT+TGG - chr5_1:33258583-33258602 None:intergenic 25.0%
! ATGTATTCCATCATTCTTTA+AGG + chr5_1:33258631-33258650 Msa0728540:three_prime_UTR 25.0%
!! AATGAAATGAAAAACCCTTT+TGG - chr5_1:33251100-33251119 None:intergenic 25.0%
! GATTGTGAATTGAATTGAAA+GGG + chr5_1:33251499-33251518 Msa0728540:intron 25.0%
! AAATCAGTGTAAGCATAAAA+TGG - chr5_1:33251654-33251673 None:intergenic 25.0%
!!! AATGTGTTTGGTTTCAATTT+TGG - chr5_1:33251969-33251988 None:intergenic 25.0%
! TTGAAACCAAACACATTTAA+TGG + chr5_1:33251972-33251991 Msa0728540:intron 25.0%
! GTAAAACCATTAAATGTGTT+TGG - chr5_1:33251981-33252000 None:intergenic 25.0%
!! AGAGTAAAAATTGATTCTAG+AGG - chr5_1:33252266-33252285 None:intergenic 25.0%
!!! TTTGTTTTTTTTAGGGAATG+TGG + chr5_1:33252609-33252628 Msa0728540:intron 25.0%
! TTGAATATTTCAGGAAAACA+AGG + chr5_1:33252837-33252856 Msa0728540:intron 25.0%
! TGATTGGATATATCTGTAAA+TGG + chr5_1:33252993-33253012 Msa0728540:intron 25.0%
! TATATCTGTAAATGGAAAAC+AGG + chr5_1:33253001-33253020 Msa0728540:intron 25.0%
! ATCAGATAAGCAATATGTAT+GGG + chr5_1:33253049-33253068 Msa0728540:CDS 25.0%
! TGACAATAAAAGAACAAATG+GGG - chr5_1:33253687-33253706 None:intergenic 25.0%
! CTGACAATAAAAGAACAAAT+GGG - chr5_1:33253688-33253707 None:intergenic 25.0%
! ACTGACAATAAAAGAACAAA+TGG - chr5_1:33253689-33253708 None:intergenic 25.0%
!! CTCTAACTTTTACAAAATAC+AGG + chr5_1:33253906-33253925 Msa0728540:intron 25.0%
!!! ACCATTTTAGAACAAAAAAG+AGG + chr5_1:33253929-33253948 Msa0728540:intron 25.0%
!!! CCATTTTAGAACAAAAAAGA+GGG + chr5_1:33253930-33253949 Msa0728540:intron 25.0%
!!! CATTTTAGAACAAAAAAGAG+GGG + chr5_1:33253931-33253950 Msa0728540:intron 25.0%
!! AGTAATATAAAGGCTCATTT+TGG + chr5_1:33253972-33253991 Msa0728540:intron 25.0%
! TTTGGTACCAAAAATATAAG+AGG + chr5_1:33253990-33254009 Msa0728540:intron 25.0%
! TTGGTACCAAAAATATAAGA+GGG + chr5_1:33253991-33254010 Msa0728540:intron 25.0%
!! AAAATGAGGGTACAATATTT+AGG - chr5_1:33254049-33254068 None:intergenic 25.0%
!!! ATTGTACCCTCATTTTAATT+AGG + chr5_1:33254053-33254072 Msa0728540:intron 25.0%
! GTAGAACCTAATTAAAATGA+GGG - chr5_1:33254062-33254081 None:intergenic 25.0%
! TGTAGAACCTAATTAAAATG+AGG - chr5_1:33254063-33254082 None:intergenic 25.0%
!!! TAGTCTGCTTTTTAATGATT+TGG + chr5_1:33254131-33254150 Msa0728540:intron 25.0%
!! AAATTTGTTTCCATCTTGAA+AGG + chr5_1:33254221-33254240 Msa0728540:intron 25.0%
!! AATTTGTTTCCATCTTGAAA+GGG + chr5_1:33254222-33254241 Msa0728540:intron 25.0%
!! TTAATTTGAAAATTGACAGG+TGG + chr5_1:33254445-33254464 Msa0728540:intron 25.0%
! TTTCAACTTAATTGTAGATG+CGG + chr5_1:33254782-33254801 Msa0728540:intron 25.0%
! CATTCTATATATTCCAAGTA+TGG + chr5_1:33255005-33255024 Msa0728540:CDS 25.0%
!! TCTATTTAAAACATTCTTCG+CGG + chr5_1:33255206-33255225 Msa0728540:intron 25.0%
! ATCAATTATACATTTACGAG+AGG - chr5_1:33255270-33255289 None:intergenic 25.0%
! ACATTAGCACAAAACATTAT+GGG - chr5_1:33255729-33255748 None:intergenic 25.0%
! AACATTAGCACAAAACATTA+TGG - chr5_1:33255730-33255749 None:intergenic 25.0%
!! TAATGTTGTAATTTCAGGTA+AGG + chr5_1:33255743-33255762 Msa0728540:intron 25.0%
! TTTGGTAGGTTTATTAAGTT+GGG + chr5_1:33255946-33255965 Msa0728540:CDS 25.0%
!! TCTTTTCTTTGTATGTTTGT+AGG - chr5_1:33256406-33256425 None:intergenic 25.0%
! AATACAATCTACTTTGTGAT+TGG + chr5_1:33256601-33256620 Msa0728540:CDS 25.0%
!! ACACTTAAATCTTTGATGAT+GGG - chr5_1:33256924-33256943 None:intergenic 25.0%
! TACACTTAAATCTTTGATGA+TGG - chr5_1:33256925-33256944 None:intergenic 25.0%
! GTAAGTTCACATTATTAGTT+TGG + chr5_1:33256942-33256961 Msa0728540:intron 25.0%
! TTAAACTTGGATGATATTTG+TGG + chr5_1:33257287-33257306 Msa0728540:intron 25.0%
! GGGTAAATTAATAAGAGTAA+TGG - chr5_1:33257558-33257577 None:intergenic 25.0%
! AATTTACCCTATACAATAGT+TGG + chr5_1:33257569-33257588 Msa0728540:intron 25.0%
!! CCTCTATTGTACAATTTTAA+AGG - chr5_1:33257851-33257870 None:intergenic 25.0%
!!! CCTTTAAAATTGTACAATAG+AGG + chr5_1:33257848-33257867 Msa0728540:intron 25.0%
! GAGTTAGGAAATAAGATTTA+TGG + chr5_1:33258196-33258215 Msa0728540:CDS 25.0%
!! AACTAATTCATGCTATTTGA+GGG - chr5_1:33258397-33258416 None:intergenic 25.0%
!! TAACTAATTCATGCTATTTG+AGG - chr5_1:33258398-33258417 None:intergenic 25.0%
! TATGAATTCTTAATGCTGAA+AGG + chr5_1:33258494-33258513 Msa0728540:three_prime_UTR 25.0%
!! TACTGGATCACAATTTTATT+GGG - chr5_1:33258582-33258601 None:intergenic 25.0%
!! ATACTGGATCACAATTTTAT+TGG - chr5_1:33258583-33258602 None:intergenic 25.0%
! ATGTATTCCATCATTCTTTA+AGG + chr5_1:33258631-33258650 Msa0728540:three_prime_UTR 25.0%
!!! TTTTGGAATGGAAGTTGAAA+GGG - chr5_1:33251083-33251102 None:intergenic 30.0%
TTTCAACTTCCATTCCAAAA+GGG + chr5_1:33251083-33251102 Msa0728540:five_prime_UTR 30.0%
!! AATGAAAAACCCTTTTGGAA+TGG - chr5_1:33251095-33251114 None:intergenic 30.0%
ACAAATTCAAAAACCTACCT+CGG - chr5_1:33251438-33251457 None:intergenic 30.0%
GGATTGTGAATTGAATTGAA+AGG + chr5_1:33251498-33251517 Msa0728540:intron 30.0%
GAACAATCAAATCCATCAAT+CGG - chr5_1:33251565-33251584 None:intergenic 30.0%
! CAATTGACTTAATGTGCATT+AGG + chr5_1:33251685-33251704 Msa0728540:intron 30.0%
!! AGTGTGTTTGGTTTCAATTT+TGG - chr5_1:33252129-33252148 None:intergenic 30.0%
TTGAAACCAAACACACTTAA+TGG + chr5_1:33252132-33252151 Msa0728540:intron 30.0%
GTAAAACCATTAAGTGTGTT+TGG - chr5_1:33252141-33252160 None:intergenic 30.0%
!! AGTGTGTTTGGTTTCAATTT+TGG - chr5_1:33252129-33252148 None:intergenic 30.0%
TTGAAACCAAACACACTTAA+TGG + chr5_1:33252132-33252151 Msa0728540:intron 30.0%
GTAAAACCATTAAGTGTGTT+TGG - chr5_1:33252141-33252160 None:intergenic 30.0%
ATAGTAATAGTTCCATTGTC+CGG - chr5_1:33252557-33252576 None:intergenic 30.0%
CGTATGTTTGTTTATAGTTG+TGG + chr5_1:33252579-33252598 Msa0728540:intron 30.0%
!!! AAAGTTTTTGAAGGCACTTA+AGG + chr5_1:33252731-33252750 Msa0728540:CDS 30.0%
TTTCAGGAAAACAAGGATTT+AGG + chr5_1:33252844-33252863 Msa0728540:intron 30.0%
!! AATGGATTGATTGGTCAATT+TGG + chr5_1:33252874-33252893 Msa0728540:CDS 30.0%
CATATTGCTTATCTGATCTA+GGG - chr5_1:33253046-33253065 None:intergenic 30.0%
ACATATTGCTTATCTGATCT+AGG - chr5_1:33253047-33253066 None:intergenic 30.0%
GATCAGATAAGCAATATGTA+TGG + chr5_1:33253048-33253067 Msa0728540:CDS 30.0%
CTGAAAACATGTGTATGTAT+TGG - chr5_1:33253317-33253336 None:intergenic 30.0%
GAGAATTCATACTTATCATC+CGG - chr5_1:33253434-33253453 None:intergenic 30.0%
! TTTTCTTGCCATGTATAGAT+GGG - chr5_1:33253512-33253531 None:intergenic 30.0%
! TTTTTCTTGCCATGTATAGA+TGG - chr5_1:33253513-33253532 None:intergenic 30.0%
AATCTGTAATGAGAAGATCT+TGG - chr5_1:33253554-33253573 None:intergenic 30.0%
ATTCATGTCATACTGTTTGT+TGG + chr5_1:33253571-33253590 Msa0728540:intron 30.0%
TTCATGTCATACTGTTTGTT+GGG + chr5_1:33253572-33253591 Msa0728540:intron 30.0%
!! ATTGATAATGATGGATAGAC+TGG + chr5_1:33253653-33253672 Msa0728540:intron 30.0%
TCTTTGGATTCTCATATGTA+AGG + chr5_1:33253717-33253736 Msa0728540:intron 30.0%
!!! TGGTCCCTTATCTTTATTTT+AGG + chr5_1:33253791-33253810 Msa0728540:intron 30.0%
! GTTTCAATTTGGTTTCGAAA+TGG + chr5_1:33253813-33253832 Msa0728540:intron 30.0%
GGATCACAATTTAAACGAAA+AGG - chr5_1:33253870-33253889 None:intergenic 30.0%
TTGTAAAAGTTAGAGCAAAG+AGG - chr5_1:33253901-33253920 None:intergenic 30.0%
!!! CCCTCTTTTTTGTTCTAAAA+TGG - chr5_1:33253933-33253952 None:intergenic 30.0%
! TTTGGTCCCTCTTATATTTT+TGG - chr5_1:33254000-33254019 None:intergenic 30.0%
ATTAGGTTCTACAGTAGTTA+TGG + chr5_1:33254070-33254089 Msa0728540:intron 30.0%
TATTCAGTTGAGAGGAAATA+TGG - chr5_1:33254266-33254285 None:intergenic 30.0%
AGATTATATTGCACCAATCA+AGG + chr5_1:33254298-33254317 Msa0728540:intron 30.0%
TAACTTGAAATCACCTTGAT+TGG - chr5_1:33254314-33254333 None:intergenic 30.0%
TCAGTGGTAATAATGAGAAT+AGG - chr5_1:33254362-33254381 None:intergenic 30.0%
! GTGCTTTTACTATCTTATCA+GGG + chr5_1:33254581-33254600 Msa0728540:intron 30.0%
! AGACTAAAACTGAGAAGTAT+TGG + chr5_1:33254624-33254643 Msa0728540:CDS 30.0%
!! GACTAAAACTGAGAAGTATT+GGG + chr5_1:33254625-33254644 Msa0728540:CDS 30.0%
ATCAATTAGAGGCAAAATAC+AGG - chr5_1:33254735-33254754 None:intergenic 30.0%
! TTCATCTCAGATGATTTTGA+TGG + chr5_1:33255096-33255115 Msa0728540:CDS 30.0%
TTCTGATTCTGTTCATTGTT+CGG + chr5_1:33255462-33255481 Msa0728540:intron 30.0%
AACAGCAAAGTTATAGCAAA+AGG - chr5_1:33255491-33255510 None:intergenic 30.0%
TTACAATTCTGCTTTCTTGA+AGG - chr5_1:33255597-33255616 None:intergenic 30.0%
AACATCTTATCTTGCAAACA+TGG + chr5_1:33255623-33255642 Msa0728540:intron 30.0%
TTATGGGAAGTGAAAGAAAA+AGG - chr5_1:33255713-33255732 None:intergenic 30.0%
TGTGCTAATGTTGTAATTTC+AGG + chr5_1:33255738-33255757 Msa0728540:intron 30.0%
! AGAATATGATCTGTGTTTTC+AGG + chr5_1:33255900-33255919 Msa0728540:intron 30.0%
TTCAGGATTACAAGAAATTC+TGG + chr5_1:33255917-33255936 Msa0728540:intron 30.0%
TCAGGATTACAAGAAATTCT+GGG + chr5_1:33255918-33255937 Msa0728540:intron 30.0%
CTTTGGTAGGTTTATTAAGT+TGG + chr5_1:33255945-33255964 Msa0728540:CDS 30.0%
! TGTTTTCAACATACTCATCT+AGG - chr5_1:33256056-33256075 None:intergenic 30.0%
AGATGAGTATGTTGAAAACA+TGG + chr5_1:33256056-33256075 Msa0728540:CDS 30.0%
GATGAGTATGTTGAAAACAT+GGG + chr5_1:33256057-33256076 Msa0728540:CDS 30.0%
! TGAACCAACTTCTCTAAAAA+TGG - chr5_1:33256144-33256163 None:intergenic 30.0%
!! GAAATTTGTTGATATCAGCA+AGG + chr5_1:33256424-33256443 Msa0728540:CDS 30.0%
! TATTTTGCTTCTAGCAAAGT+GGG + chr5_1:33256504-33256523 Msa0728540:intron 30.0%
TATCGCAAAAAATTTCTCTC+AGG + chr5_1:33256540-33256559 Msa0728540:intron 30.0%
AAGTAGATTGTATTCTTGCT+TGG - chr5_1:33256595-33256614 None:intergenic 30.0%
CTTCTAGTCATTTAGAAACA+TGG - chr5_1:33256761-33256780 None:intergenic 30.0%
AACTGTGACAACTATGTATA+GGG + chr5_1:33257030-33257049 Msa0728540:intron 30.0%
ACTTCAAGATCAAATAACAG+AGG + chr5_1:33257317-33257336 Msa0728540:intron 30.0%
CTTCAAGATCAAATAACAGA+GGG + chr5_1:33257318-33257337 Msa0728540:intron 30.0%
! GGTATATGAACATCAGTTTT+GGG - chr5_1:33257537-33257556 None:intergenic 30.0%
! TGGTATATGAACATCAGTTT+TGG - chr5_1:33257538-33257557 None:intergenic 30.0%
CTACAACCAACTATTGTATA+GGG - chr5_1:33257578-33257597 None:intergenic 30.0%
ACTACAACCAACTATTGTAT+AGG - chr5_1:33257579-33257598 None:intergenic 30.0%
GTCTTCAACATATTACTACT+TGG - chr5_1:33257634-33257653 None:intergenic 30.0%
AATAGTAAGCTCAGGATAAA+TGG + chr5_1:33257671-33257690 Msa0728540:intron 30.0%
!! TGTAGACTATTGGTTGATTT+TGG + chr5_1:33257702-33257721 Msa0728540:intron 30.0%
TCAGGATTTAACTCTCTTAT+AGG + chr5_1:33257729-33257748 Msa0728540:intron 30.0%
AGTTACTTGAAATGAGTCAT+TGG - chr5_1:33257882-33257901 None:intergenic 30.0%
! AAAAGAAAGTGAAAGTACAG+AGG + chr5_1:33258294-33258313 Msa0728540:CDS 30.0%
TGTGTAACAATATGCCTTAA+AGG + chr5_1:33258534-33258553 Msa0728540:three_prime_UTR 30.0%
! GATCACAATTTTATTGGGAA+AGG - chr5_1:33258577-33258596 None:intergenic 30.0%
TTCTACTCCTTAAAGAATGA+TGG - chr5_1:33258641-33258660 None:intergenic 30.0%
!!! TTTTGGAATGGAAGTTGAAA+GGG - chr5_1:33251083-33251102 None:intergenic 30.0%
TTTCAACTTCCATTCCAAAA+GGG + chr5_1:33251083-33251102 Msa0728540:five_prime_UTR 30.0%
!! AATGAAAAACCCTTTTGGAA+TGG - chr5_1:33251095-33251114 None:intergenic 30.0%
ACAAATTCAAAAACCTACCT+CGG - chr5_1:33251438-33251457 None:intergenic 30.0%
GGATTGTGAATTGAATTGAA+AGG + chr5_1:33251498-33251517 Msa0728540:intron 30.0%
GAACAATCAAATCCATCAAT+CGG - chr5_1:33251565-33251584 None:intergenic 30.0%
! CAATTGACTTAATGTGCATT+AGG + chr5_1:33251685-33251704 Msa0728540:intron 30.0%
!! AGTGTGTTTGGTTTCAATTT+TGG - chr5_1:33252129-33252148 None:intergenic 30.0%
TTGAAACCAAACACACTTAA+TGG + chr5_1:33252132-33252151 Msa0728540:intron 30.0%
GTAAAACCATTAAGTGTGTT+TGG - chr5_1:33252141-33252160 None:intergenic 30.0%
!! AGTGTGTTTGGTTTCAATTT+TGG - chr5_1:33252129-33252148 None:intergenic 30.0%
TTGAAACCAAACACACTTAA+TGG + chr5_1:33252132-33252151 Msa0728540:intron 30.0%
GTAAAACCATTAAGTGTGTT+TGG - chr5_1:33252141-33252160 None:intergenic 30.0%
ATAGTAATAGTTCCATTGTC+CGG - chr5_1:33252557-33252576 None:intergenic 30.0%
CGTATGTTTGTTTATAGTTG+TGG + chr5_1:33252579-33252598 Msa0728540:intron 30.0%
!!! AAAGTTTTTGAAGGCACTTA+AGG + chr5_1:33252731-33252750 Msa0728540:CDS 30.0%
TTTCAGGAAAACAAGGATTT+AGG + chr5_1:33252844-33252863 Msa0728540:intron 30.0%
!! AATGGATTGATTGGTCAATT+TGG + chr5_1:33252874-33252893 Msa0728540:CDS 30.0%
CATATTGCTTATCTGATCTA+GGG - chr5_1:33253046-33253065 None:intergenic 30.0%
ACATATTGCTTATCTGATCT+AGG - chr5_1:33253047-33253066 None:intergenic 30.0%
GATCAGATAAGCAATATGTA+TGG + chr5_1:33253048-33253067 Msa0728540:CDS 30.0%
CTGAAAACATGTGTATGTAT+TGG - chr5_1:33253317-33253336 None:intergenic 30.0%
GAGAATTCATACTTATCATC+CGG - chr5_1:33253434-33253453 None:intergenic 30.0%
! TTTTCTTGCCATGTATAGAT+GGG - chr5_1:33253512-33253531 None:intergenic 30.0%
! TTTTTCTTGCCATGTATAGA+TGG - chr5_1:33253513-33253532 None:intergenic 30.0%
AATCTGTAATGAGAAGATCT+TGG - chr5_1:33253554-33253573 None:intergenic 30.0%
ATTCATGTCATACTGTTTGT+TGG + chr5_1:33253571-33253590 Msa0728540:intron 30.0%
TTCATGTCATACTGTTTGTT+GGG + chr5_1:33253572-33253591 Msa0728540:intron 30.0%
!! ATTGATAATGATGGATAGAC+TGG + chr5_1:33253653-33253672 Msa0728540:intron 30.0%
TCTTTGGATTCTCATATGTA+AGG + chr5_1:33253717-33253736 Msa0728540:intron 30.0%
!!! TGGTCCCTTATCTTTATTTT+AGG + chr5_1:33253791-33253810 Msa0728540:intron 30.0%
! GTTTCAATTTGGTTTCGAAA+TGG + chr5_1:33253813-33253832 Msa0728540:intron 30.0%
GGATCACAATTTAAACGAAA+AGG - chr5_1:33253870-33253889 None:intergenic 30.0%
TTGTAAAAGTTAGAGCAAAG+AGG - chr5_1:33253901-33253920 None:intergenic 30.0%
!!! CCCTCTTTTTTGTTCTAAAA+TGG - chr5_1:33253933-33253952 None:intergenic 30.0%
! TTTGGTCCCTCTTATATTTT+TGG - chr5_1:33254000-33254019 None:intergenic 30.0%
ATTAGGTTCTACAGTAGTTA+TGG + chr5_1:33254070-33254089 Msa0728540:intron 30.0%
TATTCAGTTGAGAGGAAATA+TGG - chr5_1:33254266-33254285 None:intergenic 30.0%
AGATTATATTGCACCAATCA+AGG + chr5_1:33254298-33254317 Msa0728540:intron 30.0%
TAACTTGAAATCACCTTGAT+TGG - chr5_1:33254314-33254333 None:intergenic 30.0%
TCAGTGGTAATAATGAGAAT+AGG - chr5_1:33254362-33254381 None:intergenic 30.0%
! GTGCTTTTACTATCTTATCA+GGG + chr5_1:33254581-33254600 Msa0728540:intron 30.0%
! AGACTAAAACTGAGAAGTAT+TGG + chr5_1:33254624-33254643 Msa0728540:CDS 30.0%
!! GACTAAAACTGAGAAGTATT+GGG + chr5_1:33254625-33254644 Msa0728540:CDS 30.0%
ATCAATTAGAGGCAAAATAC+AGG - chr5_1:33254735-33254754 None:intergenic 30.0%
! TTCATCTCAGATGATTTTGA+TGG + chr5_1:33255096-33255115 Msa0728540:CDS 30.0%
TTCTGATTCTGTTCATTGTT+CGG + chr5_1:33255462-33255481 Msa0728540:intron 30.0%
AACAGCAAAGTTATAGCAAA+AGG - chr5_1:33255491-33255510 None:intergenic 30.0%
TTACAATTCTGCTTTCTTGA+AGG - chr5_1:33255597-33255616 None:intergenic 30.0%
AACATCTTATCTTGCAAACA+TGG + chr5_1:33255623-33255642 Msa0728540:intron 30.0%
TTATGGGAAGTGAAAGAAAA+AGG - chr5_1:33255713-33255732 None:intergenic 30.0%
TGTGCTAATGTTGTAATTTC+AGG + chr5_1:33255738-33255757 Msa0728540:intron 30.0%
! AGAATATGATCTGTGTTTTC+AGG + chr5_1:33255900-33255919 Msa0728540:intron 30.0%
TTCAGGATTACAAGAAATTC+TGG + chr5_1:33255917-33255936 Msa0728540:intron 30.0%
TCAGGATTACAAGAAATTCT+GGG + chr5_1:33255918-33255937 Msa0728540:intron 30.0%
CTTTGGTAGGTTTATTAAGT+TGG + chr5_1:33255945-33255964 Msa0728540:CDS 30.0%
! TGTTTTCAACATACTCATCT+AGG - chr5_1:33256056-33256075 None:intergenic 30.0%
AGATGAGTATGTTGAAAACA+TGG + chr5_1:33256056-33256075 Msa0728540:CDS 30.0%
GATGAGTATGTTGAAAACAT+GGG + chr5_1:33256057-33256076 Msa0728540:CDS 30.0%
! TGAACCAACTTCTCTAAAAA+TGG - chr5_1:33256144-33256163 None:intergenic 30.0%
!! GAAATTTGTTGATATCAGCA+AGG + chr5_1:33256424-33256443 Msa0728540:CDS 30.0%
! TATTTTGCTTCTAGCAAAGT+GGG + chr5_1:33256504-33256523 Msa0728540:intron 30.0%
TATCGCAAAAAATTTCTCTC+AGG + chr5_1:33256540-33256559 Msa0728540:intron 30.0%
AAGTAGATTGTATTCTTGCT+TGG - chr5_1:33256595-33256614 None:intergenic 30.0%
CTTCTAGTCATTTAGAAACA+TGG - chr5_1:33256761-33256780 None:intergenic 30.0%
AACTGTGACAACTATGTATA+GGG + chr5_1:33257030-33257049 Msa0728540:intron 30.0%
ACTTCAAGATCAAATAACAG+AGG + chr5_1:33257317-33257336 Msa0728540:intron 30.0%
CTTCAAGATCAAATAACAGA+GGG + chr5_1:33257318-33257337 Msa0728540:intron 30.0%
! GGTATATGAACATCAGTTTT+GGG - chr5_1:33257537-33257556 None:intergenic 30.0%
! TGGTATATGAACATCAGTTT+TGG - chr5_1:33257538-33257557 None:intergenic 30.0%
CTACAACCAACTATTGTATA+GGG - chr5_1:33257578-33257597 None:intergenic 30.0%
ACTACAACCAACTATTGTAT+AGG - chr5_1:33257579-33257598 None:intergenic 30.0%
GTCTTCAACATATTACTACT+TGG - chr5_1:33257634-33257653 None:intergenic 30.0%
AATAGTAAGCTCAGGATAAA+TGG + chr5_1:33257671-33257690 Msa0728540:intron 30.0%
!! TGTAGACTATTGGTTGATTT+TGG + chr5_1:33257702-33257721 Msa0728540:intron 30.0%
TCAGGATTTAACTCTCTTAT+AGG + chr5_1:33257729-33257748 Msa0728540:intron 30.0%
AGTTACTTGAAATGAGTCAT+TGG - chr5_1:33257882-33257901 None:intergenic 30.0%
! AAAAGAAAGTGAAAGTACAG+AGG + chr5_1:33258294-33258313 Msa0728540:CDS 30.0%
TGTGTAACAATATGCCTTAA+AGG + chr5_1:33258534-33258553 Msa0728540:three_prime_UTR 30.0%
! GATCACAATTTTATTGGGAA+AGG - chr5_1:33258577-33258596 None:intergenic 30.0%
TTCTACTCCTTAAAGAATGA+TGG - chr5_1:33258641-33258660 None:intergenic 30.0%
AAGAAGGGTTTATGGAGATA+TGG - chr5_1:33251055-33251074 None:intergenic 35.0%
!!! CTTTTGGAATGGAAGTTGAA+AGG - chr5_1:33251084-33251103 None:intergenic 35.0%
CTTTCAACTTCCATTCCAAA+AGG + chr5_1:33251082-33251101 Msa0728540:five_prime_UTR 35.0%
!! CGTTATCTTTTTAGAGAGAG+TGG - chr5_1:33251130-33251149 None:intergenic 35.0%
ATGGTGTTTACACTTCAAAC+CGG - chr5_1:33251324-33251343 None:intergenic 35.0%
! TATTTACCTTTTTGCCCTTC+TGG + chr5_1:33251463-33251482 Msa0728540:intron 35.0%
! ATTTACCTTTTTGCCCTTCT+GGG + chr5_1:33251464-33251483 Msa0728540:intron 35.0%
! TTTTTCTCAGAGAACTTGTG+AGG + chr5_1:33251609-33251628 Msa0728540:CDS 35.0%
! AAGCTACTAGTTGTAGCTTT+TGG - chr5_1:33251852-33251871 None:intergenic 35.0%
!! AGTGTCAAAATTGATTCGAG+AGG - chr5_1:33251946-33251965 None:intergenic 35.0%
TTCTTTAAATCATTCGAGCG+TGG + chr5_1:33252063-33252082 Msa0728540:intron 35.0%
TTCTTTAAATCATTCGAGCG+TGG + chr5_1:33252063-33252082 Msa0728540:intron 35.0%
TTCTTTGGTCATTCCAATAC+CGG - chr5_1:33252667-33252686 None:intergenic 35.0%
ACAATCAATGAGCTCTTCTT+TGG - chr5_1:33252682-33252701 None:intergenic 35.0%
! TGGTACCTCAAAGTTTTTGA+AGG + chr5_1:33252722-33252741 Msa0728540:CDS 35.0%
AAGTGCCTTCAAAAACTTTG+AGG - chr5_1:33252730-33252749 None:intergenic 35.0%
! AAGGCACTTAAGGTAATATG+TGG + chr5_1:33252741-33252760 Msa0728540:intron 35.0%
AAGGATTTAGGAGCAGATAA+TGG + chr5_1:33252856-33252875 Msa0728540:CDS 35.0%
!! TTGATTGGTCAATTTGGTGT+TGG + chr5_1:33252880-33252899 Msa0728540:CDS 35.0%
GTATGGTGTGGATTTCATAA+GGG + chr5_1:33252934-33252953 Msa0728540:intron 35.0%
!! TTTCATAAGGGTGTTCTCTA+TGG + chr5_1:33252946-33252965 Msa0728540:intron 35.0%
ATAGCAGCTCTTATGTGATA+AGG + chr5_1:33253084-33253103 Msa0728540:CDS 35.0%
TAGCAGCTCTTATGTGATAA+GGG + chr5_1:33253085-33253104 Msa0728540:CDS 35.0%
!! ATTGGCTTGACCAAGAATTT+GGG - chr5_1:33253299-33253318 None:intergenic 35.0%
!! TATTGGCTTGACCAAGAATT+TGG - chr5_1:33253300-33253319 None:intergenic 35.0%
CTGGACAGCAACAAAAAAAA+AGG - chr5_1:33253411-33253430 None:intergenic 35.0%
!! ACCAAACTCTGAATTTTGGT+TGG - chr5_1:33253461-33253480 None:intergenic 35.0%
! CTTCACCAAACTCTGAATTT+TGG - chr5_1:33253465-33253484 None:intergenic 35.0%
TTTCTTGCCATGTATAGATG+GGG - chr5_1:33253511-33253530 None:intergenic 35.0%
! GCAAGAAAAATCTAGAACTG+TGG + chr5_1:33253523-33253542 Msa0728540:CDS 35.0%
! AGAAAAATCTAGAACTGTGG+AGG + chr5_1:33253526-33253545 Msa0728540:CDS 35.0%
TTGTCAGTGATATGTCTCTT+TGG + chr5_1:33253701-33253720 Msa0728540:intron 35.0%
! ATTCTCATATGTAAGGTGCT+TGG + chr5_1:33253724-33253743 Msa0728540:intron 35.0%
CAAACTCCTAAGTAAGTTCA+GGG - chr5_1:33254162-33254181 None:intergenic 35.0%
TCAAACTCCTAAGTAAGTTC+AGG - chr5_1:33254163-33254182 None:intergenic 35.0%
AGTTGAGAGGAAATATGGAA+AGG - chr5_1:33254261-33254280 None:intergenic 35.0%
! ACGTTTTCTATTCAGTTGAG+AGG - chr5_1:33254274-33254293 None:intergenic 35.0%
!! CAAGGTGATTTCAAGTTATC+TGG + chr5_1:33254316-33254335 Msa0728540:intron 35.0%
ACATGATACTACTACTTCAG+TGG - chr5_1:33254378-33254397 None:intergenic 35.0%
AGTAGTATCATGTACCATGA+AGG + chr5_1:33254385-33254404 Msa0728540:intron 35.0%
ATTCATTTGTCACTCCTTCA+TGG - chr5_1:33254402-33254421 None:intergenic 35.0%
AGGAAGAAGAACCTAAAGAA+GGG + chr5_1:33254471-33254490 Msa0728540:CDS 35.0%
! CGTGCTTTTACTATCTTATC+AGG + chr5_1:33254580-33254599 Msa0728540:intron 35.0%
TAGCTCAAACTAACCCATAT+TGG - chr5_1:33254677-33254696 None:intergenic 35.0%
AGAGGCAAAATACAGGATAT+TGG - chr5_1:33254728-33254747 None:intergenic 35.0%
AGGCAATGCTAATCAATTAG+AGG - chr5_1:33254746-33254765 None:intergenic 35.0%
! GAAAAGCGTGTCAAATAAAG+AGG - chr5_1:33254766-33254785 None:intergenic 35.0%
ATTGTAGATGCGGAATTCAA+AGG + chr5_1:33254792-33254811 Msa0728540:intron 35.0%
GAATTCAAAGGATACTCCAA+GGG + chr5_1:33254804-33254823 Msa0728540:CDS 35.0%
ATATACCCACTTTACTACTG+AGG + chr5_1:33254882-33254901 Msa0728540:CDS 35.0%
ACATACCTCAGTAGTAAAGT+GGG - chr5_1:33254890-33254909 None:intergenic 35.0%
AACATACCTCAGTAGTAAAG+TGG - chr5_1:33254891-33254910 None:intergenic 35.0%
!! CTGAGGTATGTTGATAACAT+TGG + chr5_1:33254899-33254918 Msa0728540:intron 35.0%
TCAAATTGTTGAATGCCCAA+GGG - chr5_1:33254945-33254964 None:intergenic 35.0%
ACTACTTCTTCATTGTTGAG+AGG - chr5_1:33255033-33255052 None:intergenic 35.0%
!!! GGCGTATGTTCTTTGTTTTA+GGG - chr5_1:33255059-33255078 None:intergenic 35.0%
!!! AGGCGTATGTTCTTTGTTTT+AGG - chr5_1:33255060-33255079 None:intergenic 35.0%
!!! AGATGATTTTGATGGTGAAC+TGG + chr5_1:33255104-33255123 Msa0728540:CDS 35.0%
AAAATGAGCAAGAACCATTG+AGG + chr5_1:33255398-33255417 Msa0728540:intron 35.0%
TCTGATTCTGTTCATTGTTC+GGG + chr5_1:33255463-33255482 Msa0728540:intron 35.0%
TAATGAGAAAGAGACTTGTC+AGG + chr5_1:33255767-33255786 Msa0728540:CDS 35.0%
ATGATTCAAGATCTTGCTGA+AGG + chr5_1:33255802-33255821 Msa0728540:CDS 35.0%
TCTTGCTGAAGGTGAAAATA+AGG + chr5_1:33255813-33255832 Msa0728540:CDS 35.0%
ACCTGAATTGAGTGTCTTTA+TGG + chr5_1:33255873-33255892 Msa0728540:intron 35.0%
TCCATAAAGACACTCAATTC+AGG - chr5_1:33255877-33255896 None:intergenic 35.0%
! AAGAAATTCTGGGAGAACTT+TGG + chr5_1:33255928-33255947 Msa0728540:CDS 35.0%
GAAGTGTAAAATCTCAACAG+TGG - chr5_1:33256009-33256028 None:intergenic 35.0%
!! TGCTCCATTTTTAGAGAAGT+TGG + chr5_1:33256137-33256156 Msa0728540:CDS 35.0%
! GTTGGTTCAGAAAGATATTG+AGG + chr5_1:33256155-33256174 Msa0728540:CDS 35.0%
GCTTACACGTCTATTATTGT+AGG + chr5_1:33256337-33256356 Msa0728540:intron 35.0%
!! GTATGTTTGTAGGTTCTGAA+TGG - chr5_1:33256396-33256415 None:intergenic 35.0%
TGATATCAGCAAGGAAGATT+TGG + chr5_1:33256433-33256452 Msa0728540:CDS 35.0%
! AGCAAGGAAGATTTGGAATT+AGG + chr5_1:33256440-33256459 Msa0728540:CDS 35.0%
! CTATTTTGCTTCTAGCAAAG+TGG + chr5_1:33256503-33256522 Msa0728540:intron 35.0%
GATTGGATAAAACAACAGCT+CGG + chr5_1:33256618-33256637 Msa0728540:CDS 35.0%
TTGTATCTGGAAAGTTTGGT+TGG + chr5_1:33256697-33256716 Msa0728540:CDS 35.0%
! CAAGTTTGGAGTTTATGAGA+GGG + chr5_1:33256868-33256887 Msa0728540:CDS 35.0%
CAACTGTGACAACTATGTAT+AGG + chr5_1:33257029-33257048 Msa0728540:intron 35.0%
ACTGTGACAACTATGTATAG+GGG + chr5_1:33257031-33257050 Msa0728540:intron 35.0%
ATAGTTGGTTGTAGTAGAAG+TGG + chr5_1:33257584-33257603 Msa0728540:intron 35.0%
AGAAGTCTAATAGTAAGCTC+AGG + chr5_1:33257663-33257682 Msa0728540:intron 35.0%
GGCAACAATTTGTAGACTAT+TGG + chr5_1:33257692-33257711 Msa0728540:intron 35.0%
! CTGATGTTTTCACCCTTAAA+GGG - chr5_1:33257762-33257781 None:intergenic 35.0%
!!! TGTTTTTTTGTCAATGGCTG+AGG + chr5_1:33257810-33257829 Msa0728540:intron 35.0%
! GATACAGCACAAATTTCTAG+TGG + chr5_1:33258060-33258079 Msa0728540:CDS 35.0%
! TCTTATTTCCTAACTCAGCA+GGG - chr5_1:33258192-33258211 None:intergenic 35.0%
! ATCTTATTTCCTAACTCAGC+AGG - chr5_1:33258193-33258212 None:intergenic 35.0%
! TTTTCTGCTATGACTTCAGA+AGG - chr5_1:33258334-33258353 None:intergenic 35.0%
TCATAGCAGAAAATGATCCT+TGG + chr5_1:33258341-33258360 Msa0728540:CDS 35.0%
! TTTTGGCAATATAGTGAGTG+AGG + chr5_1:33258422-33258441 Msa0728540:three_prime_UTR 35.0%
TTAAAGGAGCAAAATCCTGT+GGG + chr5_1:33258550-33258569 Msa0728540:three_prime_UTR 35.0%
AAATTGTGATCCAGTATCAC+TGG + chr5_1:33258586-33258605 Msa0728540:three_prime_UTR 35.0%
AAGAAGGGTTTATGGAGATA+TGG - chr5_1:33251055-33251074 None:intergenic 35.0%
!!! CTTTTGGAATGGAAGTTGAA+AGG - chr5_1:33251084-33251103 None:intergenic 35.0%
CTTTCAACTTCCATTCCAAA+AGG + chr5_1:33251082-33251101 Msa0728540:five_prime_UTR 35.0%
!! CGTTATCTTTTTAGAGAGAG+TGG - chr5_1:33251130-33251149 None:intergenic 35.0%
ATGGTGTTTACACTTCAAAC+CGG - chr5_1:33251324-33251343 None:intergenic 35.0%
! TATTTACCTTTTTGCCCTTC+TGG + chr5_1:33251463-33251482 Msa0728540:intron 35.0%
! ATTTACCTTTTTGCCCTTCT+GGG + chr5_1:33251464-33251483 Msa0728540:intron 35.0%
! TTTTTCTCAGAGAACTTGTG+AGG + chr5_1:33251609-33251628 Msa0728540:CDS 35.0%
! AAGCTACTAGTTGTAGCTTT+TGG - chr5_1:33251852-33251871 None:intergenic 35.0%
!! AGTGTCAAAATTGATTCGAG+AGG - chr5_1:33251946-33251965 None:intergenic 35.0%
TTCTTTAAATCATTCGAGCG+TGG + chr5_1:33252063-33252082 Msa0728540:intron 35.0%
TTCTTTAAATCATTCGAGCG+TGG + chr5_1:33252063-33252082 Msa0728540:intron 35.0%
TTCTTTGGTCATTCCAATAC+CGG - chr5_1:33252667-33252686 None:intergenic 35.0%
ACAATCAATGAGCTCTTCTT+TGG - chr5_1:33252682-33252701 None:intergenic 35.0%
! TGGTACCTCAAAGTTTTTGA+AGG + chr5_1:33252722-33252741 Msa0728540:CDS 35.0%
AAGTGCCTTCAAAAACTTTG+AGG - chr5_1:33252730-33252749 None:intergenic 35.0%
! AAGGCACTTAAGGTAATATG+TGG + chr5_1:33252741-33252760 Msa0728540:intron 35.0%
AAGGATTTAGGAGCAGATAA+TGG + chr5_1:33252856-33252875 Msa0728540:CDS 35.0%
!! TTGATTGGTCAATTTGGTGT+TGG + chr5_1:33252880-33252899 Msa0728540:CDS 35.0%
GTATGGTGTGGATTTCATAA+GGG + chr5_1:33252934-33252953 Msa0728540:intron 35.0%
!! TTTCATAAGGGTGTTCTCTA+TGG + chr5_1:33252946-33252965 Msa0728540:intron 35.0%
ATAGCAGCTCTTATGTGATA+AGG + chr5_1:33253084-33253103 Msa0728540:CDS 35.0%
TAGCAGCTCTTATGTGATAA+GGG + chr5_1:33253085-33253104 Msa0728540:CDS 35.0%
!! ATTGGCTTGACCAAGAATTT+GGG - chr5_1:33253299-33253318 None:intergenic 35.0%
!! TATTGGCTTGACCAAGAATT+TGG - chr5_1:33253300-33253319 None:intergenic 35.0%
CTGGACAGCAACAAAAAAAA+AGG - chr5_1:33253411-33253430 None:intergenic 35.0%
!! ACCAAACTCTGAATTTTGGT+TGG - chr5_1:33253461-33253480 None:intergenic 35.0%
! CTTCACCAAACTCTGAATTT+TGG - chr5_1:33253465-33253484 None:intergenic 35.0%
TTTCTTGCCATGTATAGATG+GGG - chr5_1:33253511-33253530 None:intergenic 35.0%
! GCAAGAAAAATCTAGAACTG+TGG + chr5_1:33253523-33253542 Msa0728540:CDS 35.0%
! AGAAAAATCTAGAACTGTGG+AGG + chr5_1:33253526-33253545 Msa0728540:CDS 35.0%
TTGTCAGTGATATGTCTCTT+TGG + chr5_1:33253701-33253720 Msa0728540:intron 35.0%
! ATTCTCATATGTAAGGTGCT+TGG + chr5_1:33253724-33253743 Msa0728540:intron 35.0%
CAAACTCCTAAGTAAGTTCA+GGG - chr5_1:33254162-33254181 None:intergenic 35.0%
TCAAACTCCTAAGTAAGTTC+AGG - chr5_1:33254163-33254182 None:intergenic 35.0%
AGTTGAGAGGAAATATGGAA+AGG - chr5_1:33254261-33254280 None:intergenic 35.0%
! ACGTTTTCTATTCAGTTGAG+AGG - chr5_1:33254274-33254293 None:intergenic 35.0%
!! CAAGGTGATTTCAAGTTATC+TGG + chr5_1:33254316-33254335 Msa0728540:intron 35.0%
ACATGATACTACTACTTCAG+TGG - chr5_1:33254378-33254397 None:intergenic 35.0%
AGTAGTATCATGTACCATGA+AGG + chr5_1:33254385-33254404 Msa0728540:intron 35.0%
ATTCATTTGTCACTCCTTCA+TGG - chr5_1:33254402-33254421 None:intergenic 35.0%
AGGAAGAAGAACCTAAAGAA+GGG + chr5_1:33254471-33254490 Msa0728540:CDS 35.0%
! CGTGCTTTTACTATCTTATC+AGG + chr5_1:33254580-33254599 Msa0728540:intron 35.0%
TAGCTCAAACTAACCCATAT+TGG - chr5_1:33254677-33254696 None:intergenic 35.0%
AGAGGCAAAATACAGGATAT+TGG - chr5_1:33254728-33254747 None:intergenic 35.0%
AGGCAATGCTAATCAATTAG+AGG - chr5_1:33254746-33254765 None:intergenic 35.0%
! GAAAAGCGTGTCAAATAAAG+AGG - chr5_1:33254766-33254785 None:intergenic 35.0%
ATTGTAGATGCGGAATTCAA+AGG + chr5_1:33254792-33254811 Msa0728540:intron 35.0%
GAATTCAAAGGATACTCCAA+GGG + chr5_1:33254804-33254823 Msa0728540:CDS 35.0%
ATATACCCACTTTACTACTG+AGG + chr5_1:33254882-33254901 Msa0728540:CDS 35.0%
ACATACCTCAGTAGTAAAGT+GGG - chr5_1:33254890-33254909 None:intergenic 35.0%
AACATACCTCAGTAGTAAAG+TGG - chr5_1:33254891-33254910 None:intergenic 35.0%
!! CTGAGGTATGTTGATAACAT+TGG + chr5_1:33254899-33254918 Msa0728540:intron 35.0%
TCAAATTGTTGAATGCCCAA+GGG - chr5_1:33254945-33254964 None:intergenic 35.0%
ACTACTTCTTCATTGTTGAG+AGG - chr5_1:33255033-33255052 None:intergenic 35.0%
!!! GGCGTATGTTCTTTGTTTTA+GGG - chr5_1:33255059-33255078 None:intergenic 35.0%
!!! AGGCGTATGTTCTTTGTTTT+AGG - chr5_1:33255060-33255079 None:intergenic 35.0%
!!! AGATGATTTTGATGGTGAAC+TGG + chr5_1:33255104-33255123 Msa0728540:CDS 35.0%
AAAATGAGCAAGAACCATTG+AGG + chr5_1:33255398-33255417 Msa0728540:intron 35.0%
TCTGATTCTGTTCATTGTTC+GGG + chr5_1:33255463-33255482 Msa0728540:intron 35.0%
TAATGAGAAAGAGACTTGTC+AGG + chr5_1:33255767-33255786 Msa0728540:CDS 35.0%
ATGATTCAAGATCTTGCTGA+AGG + chr5_1:33255802-33255821 Msa0728540:CDS 35.0%
TCTTGCTGAAGGTGAAAATA+AGG + chr5_1:33255813-33255832 Msa0728540:CDS 35.0%
ACCTGAATTGAGTGTCTTTA+TGG + chr5_1:33255873-33255892 Msa0728540:intron 35.0%
TCCATAAAGACACTCAATTC+AGG - chr5_1:33255877-33255896 None:intergenic 35.0%
! AAGAAATTCTGGGAGAACTT+TGG + chr5_1:33255928-33255947 Msa0728540:CDS 35.0%
GAAGTGTAAAATCTCAACAG+TGG - chr5_1:33256009-33256028 None:intergenic 35.0%
!! TGCTCCATTTTTAGAGAAGT+TGG + chr5_1:33256137-33256156 Msa0728540:CDS 35.0%
! GTTGGTTCAGAAAGATATTG+AGG + chr5_1:33256155-33256174 Msa0728540:CDS 35.0%
GCTTACACGTCTATTATTGT+AGG + chr5_1:33256337-33256356 Msa0728540:intron 35.0%
!! GTATGTTTGTAGGTTCTGAA+TGG - chr5_1:33256396-33256415 None:intergenic 35.0%
TGATATCAGCAAGGAAGATT+TGG + chr5_1:33256433-33256452 Msa0728540:CDS 35.0%
! AGCAAGGAAGATTTGGAATT+AGG + chr5_1:33256440-33256459 Msa0728540:CDS 35.0%
! CTATTTTGCTTCTAGCAAAG+TGG + chr5_1:33256503-33256522 Msa0728540:intron 35.0%
GATTGGATAAAACAACAGCT+CGG + chr5_1:33256618-33256637 Msa0728540:CDS 35.0%
TTGTATCTGGAAAGTTTGGT+TGG + chr5_1:33256697-33256716 Msa0728540:CDS 35.0%
! CAAGTTTGGAGTTTATGAGA+GGG + chr5_1:33256868-33256887 Msa0728540:CDS 35.0%
CAACTGTGACAACTATGTAT+AGG + chr5_1:33257029-33257048 Msa0728540:intron 35.0%
ACTGTGACAACTATGTATAG+GGG + chr5_1:33257031-33257050 Msa0728540:intron 35.0%
ATAGTTGGTTGTAGTAGAAG+TGG + chr5_1:33257584-33257603 Msa0728540:intron 35.0%
AGAAGTCTAATAGTAAGCTC+AGG + chr5_1:33257663-33257682 Msa0728540:intron 35.0%
GGCAACAATTTGTAGACTAT+TGG + chr5_1:33257692-33257711 Msa0728540:intron 35.0%
! CTGATGTTTTCACCCTTAAA+GGG - chr5_1:33257762-33257781 None:intergenic 35.0%
!!! TGTTTTTTTGTCAATGGCTG+AGG + chr5_1:33257810-33257829 Msa0728540:intron 35.0%
! GATACAGCACAAATTTCTAG+TGG + chr5_1:33258060-33258079 Msa0728540:CDS 35.0%
! TCTTATTTCCTAACTCAGCA+GGG - chr5_1:33258192-33258211 None:intergenic 35.0%
! ATCTTATTTCCTAACTCAGC+AGG - chr5_1:33258193-33258212 None:intergenic 35.0%
! TTTTCTGCTATGACTTCAGA+AGG - chr5_1:33258334-33258353 None:intergenic 35.0%
TCATAGCAGAAAATGATCCT+TGG + chr5_1:33258341-33258360 Msa0728540:CDS 35.0%
! TTTTGGCAATATAGTGAGTG+AGG + chr5_1:33258422-33258441 Msa0728540:three_prime_UTR 35.0%
TTAAAGGAGCAAAATCCTGT+GGG + chr5_1:33258550-33258569 Msa0728540:three_prime_UTR 35.0%
AAATTGTGATCCAGTATCAC+TGG + chr5_1:33258586-33258605 Msa0728540:three_prime_UTR 35.0%
AAGGGTTTATGGAGATATGG+CGG - chr5_1:33251052-33251071 None:intergenic 40.0%
GTTGAAAGGGAGTGAAAGAA+GGG - chr5_1:33251070-33251089 None:intergenic 40.0%
AGTTGAAAGGGAGTGAAAGA+AGG - chr5_1:33251071-33251090 None:intergenic 40.0%
GTGAAAAGGATGAGGAAGAA+GGG - chr5_1:33251229-33251248 None:intergenic 40.0%
AGTGAAAAGGATGAGGAAGA+AGG - chr5_1:33251230-33251249 None:intergenic 40.0%
!! AGAAATCGCTTTTCTTCCAC+CGG + chr5_1:33251302-33251321 Msa0728540:CDS 40.0%
ATACTCAAACTTCTCACCAC+TGG - chr5_1:33251411-33251430 None:intergenic 40.0%
!!! TGACTTGTTTTTGTCGTTGC+AGG + chr5_1:33251535-33251554 Msa0728540:intron 40.0%
TCACAGTCTGTATAGTCACA+AGG + chr5_1:33251583-33251602 Msa0728540:CDS 40.0%
AGAACAGATTTGATCACGCT+CGG - chr5_1:33251919-33251938 None:intergenic 40.0%
CAGTAATGCTAGTGATGCTT+TGG + chr5_1:33252451-33252470 Msa0728540:intron 40.0%
! GTGATGCTTTGGACAAATTG+AGG + chr5_1:33252462-33252481 Msa0728540:CDS 40.0%
AATAGTTCCATTGTCCGGAT+CGG - chr5_1:33252552-33252571 None:intergenic 40.0%
CTGTTATACTGCAGTGATTC+CGG + chr5_1:33252645-33252664 Msa0728540:intron 40.0%
! GAAGAGCTCATTGATTGTCT+TGG + chr5_1:33252684-33252703 Msa0728540:CDS 40.0%
!! GGAGCAGATAATGGATTGAT+TGG + chr5_1:33252865-33252884 Msa0728540:CDS 40.0%
TGCATTTCTTGTTGCTGACA+GGG + chr5_1:33252912-33252931 Msa0728540:CDS 40.0%
GGTATGGTGTGGATTTCATA+AGG + chr5_1:33252933-33252952 Msa0728540:intron 40.0%
GAAGTGTAATCTGTGTACCA+CGG - chr5_1:33253139-33253158 None:intergenic 40.0%
TCGCACGCATGAATATGATA+TGG - chr5_1:33253244-33253263 None:intergenic 40.0%
ATATCATATTCATGCGTGCG+AGG + chr5_1:33253243-33253262 Msa0728540:intron 40.0%
AGTTAGATCCCCCAAATTCT+TGG + chr5_1:33253286-33253305 Msa0728540:intron 40.0%
! TTGGCTTGACCAAGAATTTG+GGG - chr5_1:33253298-33253317 None:intergenic 40.0%
!!! TTTTTTTGTTGCTGTCCAGC+CGG + chr5_1:33253412-33253431 Msa0728540:intron 40.0%
ATTCATACTTATCATCCGGC+TGG - chr5_1:33253430-33253449 None:intergenic 40.0%
GCCAACCAAAATTCAGAGTT+TGG + chr5_1:33253457-33253476 Msa0728540:CDS 40.0%
TTTCCTTCCCCATCTATACA+TGG + chr5_1:33253501-33253520 Msa0728540:CDS 40.0%
CATGTGTGAAATCAGAGAAG+TGG - chr5_1:33253626-33253645 None:intergenic 40.0%
TAGAGCAAAGAGGATCTCTA+AGG - chr5_1:33253891-33253910 None:intergenic 40.0%
!! TTCAATCACCTTTAGCTTGC+TGG + chr5_1:33254094-33254113 Msa0728540:intron 40.0%
!! TCAATCACCTTTAGCTTGCT+GGG + chr5_1:33254095-33254114 Msa0728540:intron 40.0%
TGAAAATTGACAGGTGGAAG+AGG + chr5_1:33254451-33254470 Msa0728540:intron 40.0%
GAGGAAGAAGAACCTAAAGA+AGG + chr5_1:33254470-33254489 Msa0728540:CDS 40.0%
GGAAGAAGAACCTAAAGAAG+GGG + chr5_1:33254472-33254491 Msa0728540:CDS 40.0%
!! AAACTGAGAAGTATTGGGAC+TGG + chr5_1:33254630-33254649 Msa0728540:CDS 40.0%
!! AACTGAGAAGTATTGGGACT+GGG + chr5_1:33254631-33254650 Msa0728540:CDS 40.0%
CAACGAGACAAAGCCAATAT+GGG + chr5_1:33254661-33254680 Msa0728540:CDS 40.0%
AGCTATTACACCTGCTTTGA+TGG + chr5_1:33254692-33254711 Msa0728540:intron 40.0%
GGAATTCAAAGGATACTCCA+AGG + chr5_1:33254803-33254822 Msa0728540:CDS 40.0%
AACTCATTGTACTCTTCCCT+TGG - chr5_1:33254823-33254842 None:intergenic 40.0%
GTAAAGTGGGTATATGCAAC+TGG - chr5_1:33254877-33254896 None:intergenic 40.0%
TAGCAGAAGAACATTTCCCT+TGG + chr5_1:33254926-33254945 Msa0728540:intron 40.0%
AGCAGAAGAACATTTCCCTT+GGG + chr5_1:33254927-33254946 Msa0728540:intron 40.0%
GTCAAATTGTTGAATGCCCA+AGG - chr5_1:33254946-33254965 None:intergenic 40.0%
ACTGAGTTTCAAACTGTGCA+GGG + chr5_1:33254964-33254983 Msa0728540:intron 40.0%
TGAACACACGCTTTACATAC+AGG - chr5_1:33255080-33255099 None:intergenic 40.0%
AAAACATTCTTCGCGGAAGA+AGG + chr5_1:33255213-33255232 Msa0728540:intron 40.0%
AAACATTCTTCGCGGAAGAA+GGG + chr5_1:33255214-33255233 Msa0728540:intron 40.0%
ATTTACGAGAGGTAAGAGTG+TGG - chr5_1:33255259-33255278 None:intergenic 40.0%
TTCACAAAGCTCAAGTAACG+TGG - chr5_1:33255526-33255545 None:intergenic 40.0%
! ACGTTACTTGAGCTTTGTGA+AGG + chr5_1:33255525-33255544 Msa0728540:CDS 40.0%
! CGTTACTTGAGCTTTGTGAA+GGG + chr5_1:33255526-33255545 Msa0728540:CDS 40.0%
ACCTTCCTCTGAATGTTTCT+CGG + chr5_1:33255566-33255585 Msa0728540:CDS 40.0%
TGCTGAAGGTGAAAATAAGG+AGG + chr5_1:33255816-33255835 Msa0728540:CDS 40.0%
GAAGGTGAAAATAAGGAGGT+TGG + chr5_1:33255820-33255839 Msa0728540:intron 40.0%
! AATTCTGGGAGAACTTTGGT+AGG + chr5_1:33255932-33255951 Msa0728540:CDS 40.0%
!! TATTAAGTTGGGATGCATCG+AGG + chr5_1:33255957-33255976 Msa0728540:CDS 40.0%
GTCAGTTGCTAGGTAATAGA+TGG - chr5_1:33256097-33256116 None:intergenic 40.0%
!! TTTTCAAGCTGTCAGTTGCT+AGG - chr5_1:33256107-33256126 None:intergenic 40.0%
TTTGGTTGATCCTATTGACG+AGG + chr5_1:33256367-33256386 Msa0728540:CDS 40.0%
AGCAAAGTGGGATTTGAATG+TGG + chr5_1:33256516-33256535 Msa0728540:intron 40.0%
AAAATTTCTCTCAGGTGACG+AGG + chr5_1:33256548-33256567 Msa0728540:intron 40.0%
TTTCCAGATACAAGCACACA+CGG - chr5_1:33256690-33256709 None:intergenic 40.0%
GTGCTTGTATCTGGAAAGTT+TGG + chr5_1:33256693-33256712 Msa0728540:CDS 40.0%
!! GTTTGGTTGGTCTGCAAATA+TGG + chr5_1:33256710-33256729 Msa0728540:CDS 40.0%
! GTTGGTCTGCAAATATGGAA+AGG + chr5_1:33256715-33256734 Msa0728540:CDS 40.0%
! TTGCAGATTAATGAAGGCAC+AGG + chr5_1:33256830-33256849 Msa0728540:intron 40.0%
TCATAAACTCCAAACTTGCC+TGG - chr5_1:33256866-33256885 None:intergenic 40.0%
! GCAAGTTTGGAGTTTATGAG+AGG + chr5_1:33256867-33256886 Msa0728540:CDS 40.0%
TATGAGAGGGAGGAGAATAT+TGG + chr5_1:33256881-33256900 Msa0728540:CDS 40.0%
!! TCTTTGATGATGGGATGATC+TGG - chr5_1:33256915-33256934 None:intergenic 40.0%
ACATGTGTTGTGAACCAATC+CGG + chr5_1:33257208-33257227 Msa0728540:intron 40.0%
! TTGTTTCTCCTTTCTCATGG+AGG - chr5_1:33257403-33257422 None:intergenic 40.0%
! AGCTTGTTTCTCCTTTCTCA+TGG - chr5_1:33257406-33257425 None:intergenic 40.0%
!!! AACATCAGTTTTGGGACAAC+CGG - chr5_1:33257529-33257548 None:intergenic 40.0%
TATAGGAAGCTCTCCCTTTA+AGG + chr5_1:33257746-33257765 Msa0728540:intron 40.0%
ATAGGAAGCTCTCCCTTTAA+GGG + chr5_1:33257747-33257766 Msa0728540:intron 40.0%
! GCTGATGTTTTCACCCTTAA+AGG - chr5_1:33257763-33257782 None:intergenic 40.0%
! GATTTATGGAATGATGGCGT+TGG + chr5_1:33258210-33258229 Msa0728540:CDS 40.0%
TGATCCTTGGACAACAGATT+AGG + chr5_1:33258354-33258373 Msa0728540:CDS 40.0%
! CACAGGATTTTGCTCCTTTA+AGG - chr5_1:33258551-33258570 None:intergenic 40.0%
CTTAAAGGAGCAAAATCCTG+TGG + chr5_1:33258549-33258568 Msa0728540:three_prime_UTR 40.0%
TAAAGGAGCAAAATCCTGTG+GGG + chr5_1:33258551-33258570 Msa0728540:three_prime_UTR 40.0%
! GTGTTCTAAACCAGTGATAC+TGG - chr5_1:33258599-33258618 None:intergenic 40.0%
AAGGGTTTATGGAGATATGG+CGG - chr5_1:33251052-33251071 None:intergenic 40.0%
GTTGAAAGGGAGTGAAAGAA+GGG - chr5_1:33251070-33251089 None:intergenic 40.0%
AGTTGAAAGGGAGTGAAAGA+AGG - chr5_1:33251071-33251090 None:intergenic 40.0%
GTGAAAAGGATGAGGAAGAA+GGG - chr5_1:33251229-33251248 None:intergenic 40.0%
AGTGAAAAGGATGAGGAAGA+AGG - chr5_1:33251230-33251249 None:intergenic 40.0%
!! AGAAATCGCTTTTCTTCCAC+CGG + chr5_1:33251302-33251321 Msa0728540:CDS 40.0%
ATACTCAAACTTCTCACCAC+TGG - chr5_1:33251411-33251430 None:intergenic 40.0%
!!! TGACTTGTTTTTGTCGTTGC+AGG + chr5_1:33251535-33251554 Msa0728540:intron 40.0%
TCACAGTCTGTATAGTCACA+AGG + chr5_1:33251583-33251602 Msa0728540:CDS 40.0%
AGAACAGATTTGATCACGCT+CGG - chr5_1:33251919-33251938 None:intergenic 40.0%
CAGTAATGCTAGTGATGCTT+TGG + chr5_1:33252451-33252470 Msa0728540:intron 40.0%
! GTGATGCTTTGGACAAATTG+AGG + chr5_1:33252462-33252481 Msa0728540:CDS 40.0%
AATAGTTCCATTGTCCGGAT+CGG - chr5_1:33252552-33252571 None:intergenic 40.0%
CTGTTATACTGCAGTGATTC+CGG + chr5_1:33252645-33252664 Msa0728540:intron 40.0%
! GAAGAGCTCATTGATTGTCT+TGG + chr5_1:33252684-33252703 Msa0728540:CDS 40.0%
!! GGAGCAGATAATGGATTGAT+TGG + chr5_1:33252865-33252884 Msa0728540:CDS 40.0%
TGCATTTCTTGTTGCTGACA+GGG + chr5_1:33252912-33252931 Msa0728540:CDS 40.0%
GGTATGGTGTGGATTTCATA+AGG + chr5_1:33252933-33252952 Msa0728540:intron 40.0%
GAAGTGTAATCTGTGTACCA+CGG - chr5_1:33253139-33253158 None:intergenic 40.0%
TCGCACGCATGAATATGATA+TGG - chr5_1:33253244-33253263 None:intergenic 40.0%
ATATCATATTCATGCGTGCG+AGG + chr5_1:33253243-33253262 Msa0728540:intron 40.0%
AGTTAGATCCCCCAAATTCT+TGG + chr5_1:33253286-33253305 Msa0728540:intron 40.0%
! TTGGCTTGACCAAGAATTTG+GGG - chr5_1:33253298-33253317 None:intergenic 40.0%
!!! TTTTTTTGTTGCTGTCCAGC+CGG + chr5_1:33253412-33253431 Msa0728540:intron 40.0%
ATTCATACTTATCATCCGGC+TGG - chr5_1:33253430-33253449 None:intergenic 40.0%
GCCAACCAAAATTCAGAGTT+TGG + chr5_1:33253457-33253476 Msa0728540:CDS 40.0%
TTTCCTTCCCCATCTATACA+TGG + chr5_1:33253501-33253520 Msa0728540:CDS 40.0%
CATGTGTGAAATCAGAGAAG+TGG - chr5_1:33253626-33253645 None:intergenic 40.0%
TAGAGCAAAGAGGATCTCTA+AGG - chr5_1:33253891-33253910 None:intergenic 40.0%
!! TTCAATCACCTTTAGCTTGC+TGG + chr5_1:33254094-33254113 Msa0728540:intron 40.0%
!! TCAATCACCTTTAGCTTGCT+GGG + chr5_1:33254095-33254114 Msa0728540:intron 40.0%
TGAAAATTGACAGGTGGAAG+AGG + chr5_1:33254451-33254470 Msa0728540:intron 40.0%
GAGGAAGAAGAACCTAAAGA+AGG + chr5_1:33254470-33254489 Msa0728540:CDS 40.0%
GGAAGAAGAACCTAAAGAAG+GGG + chr5_1:33254472-33254491 Msa0728540:CDS 40.0%
!! AAACTGAGAAGTATTGGGAC+TGG + chr5_1:33254630-33254649 Msa0728540:CDS 40.0%
!! AACTGAGAAGTATTGGGACT+GGG + chr5_1:33254631-33254650 Msa0728540:CDS 40.0%
CAACGAGACAAAGCCAATAT+GGG + chr5_1:33254661-33254680 Msa0728540:CDS 40.0%
AGCTATTACACCTGCTTTGA+TGG + chr5_1:33254692-33254711 Msa0728540:intron 40.0%
GGAATTCAAAGGATACTCCA+AGG + chr5_1:33254803-33254822 Msa0728540:CDS 40.0%
AACTCATTGTACTCTTCCCT+TGG - chr5_1:33254823-33254842 None:intergenic 40.0%
GTAAAGTGGGTATATGCAAC+TGG - chr5_1:33254877-33254896 None:intergenic 40.0%
TAGCAGAAGAACATTTCCCT+TGG + chr5_1:33254926-33254945 Msa0728540:intron 40.0%
AGCAGAAGAACATTTCCCTT+GGG + chr5_1:33254927-33254946 Msa0728540:intron 40.0%
GTCAAATTGTTGAATGCCCA+AGG - chr5_1:33254946-33254965 None:intergenic 40.0%
ACTGAGTTTCAAACTGTGCA+GGG + chr5_1:33254964-33254983 Msa0728540:intron 40.0%
TGAACACACGCTTTACATAC+AGG - chr5_1:33255080-33255099 None:intergenic 40.0%
AAAACATTCTTCGCGGAAGA+AGG + chr5_1:33255213-33255232 Msa0728540:intron 40.0%
AAACATTCTTCGCGGAAGAA+GGG + chr5_1:33255214-33255233 Msa0728540:intron 40.0%
ATTTACGAGAGGTAAGAGTG+TGG - chr5_1:33255259-33255278 None:intergenic 40.0%
TTCACAAAGCTCAAGTAACG+TGG - chr5_1:33255526-33255545 None:intergenic 40.0%
! ACGTTACTTGAGCTTTGTGA+AGG + chr5_1:33255525-33255544 Msa0728540:CDS 40.0%
! CGTTACTTGAGCTTTGTGAA+GGG + chr5_1:33255526-33255545 Msa0728540:CDS 40.0%
ACCTTCCTCTGAATGTTTCT+CGG + chr5_1:33255566-33255585 Msa0728540:CDS 40.0%
TGCTGAAGGTGAAAATAAGG+AGG + chr5_1:33255816-33255835 Msa0728540:CDS 40.0%
GAAGGTGAAAATAAGGAGGT+TGG + chr5_1:33255820-33255839 Msa0728540:intron 40.0%
! AATTCTGGGAGAACTTTGGT+AGG + chr5_1:33255932-33255951 Msa0728540:CDS 40.0%
!! TATTAAGTTGGGATGCATCG+AGG + chr5_1:33255957-33255976 Msa0728540:CDS 40.0%
GTCAGTTGCTAGGTAATAGA+TGG - chr5_1:33256097-33256116 None:intergenic 40.0%
!! TTTTCAAGCTGTCAGTTGCT+AGG - chr5_1:33256107-33256126 None:intergenic 40.0%
TTTGGTTGATCCTATTGACG+AGG + chr5_1:33256367-33256386 Msa0728540:CDS 40.0%
AGCAAAGTGGGATTTGAATG+TGG + chr5_1:33256516-33256535 Msa0728540:intron 40.0%
AAAATTTCTCTCAGGTGACG+AGG + chr5_1:33256548-33256567 Msa0728540:intron 40.0%
TTTCCAGATACAAGCACACA+CGG - chr5_1:33256690-33256709 None:intergenic 40.0%
GTGCTTGTATCTGGAAAGTT+TGG + chr5_1:33256693-33256712 Msa0728540:CDS 40.0%
!! GTTTGGTTGGTCTGCAAATA+TGG + chr5_1:33256710-33256729 Msa0728540:CDS 40.0%
! GTTGGTCTGCAAATATGGAA+AGG + chr5_1:33256715-33256734 Msa0728540:CDS 40.0%
! TTGCAGATTAATGAAGGCAC+AGG + chr5_1:33256830-33256849 Msa0728540:intron 40.0%
TCATAAACTCCAAACTTGCC+TGG - chr5_1:33256866-33256885 None:intergenic 40.0%
! GCAAGTTTGGAGTTTATGAG+AGG + chr5_1:33256867-33256886 Msa0728540:CDS 40.0%
TATGAGAGGGAGGAGAATAT+TGG + chr5_1:33256881-33256900 Msa0728540:CDS 40.0%
!! TCTTTGATGATGGGATGATC+TGG - chr5_1:33256915-33256934 None:intergenic 40.0%
ACATGTGTTGTGAACCAATC+CGG + chr5_1:33257208-33257227 Msa0728540:intron 40.0%
! TTGTTTCTCCTTTCTCATGG+AGG - chr5_1:33257403-33257422 None:intergenic 40.0%
! AGCTTGTTTCTCCTTTCTCA+TGG - chr5_1:33257406-33257425 None:intergenic 40.0%
!!! AACATCAGTTTTGGGACAAC+CGG - chr5_1:33257529-33257548 None:intergenic 40.0%
TATAGGAAGCTCTCCCTTTA+AGG + chr5_1:33257746-33257765 Msa0728540:intron 40.0%
ATAGGAAGCTCTCCCTTTAA+GGG + chr5_1:33257747-33257766 Msa0728540:intron 40.0%
! GCTGATGTTTTCACCCTTAA+AGG - chr5_1:33257763-33257782 None:intergenic 40.0%
! GATTTATGGAATGATGGCGT+TGG + chr5_1:33258210-33258229 Msa0728540:CDS 40.0%
TGATCCTTGGACAACAGATT+AGG + chr5_1:33258354-33258373 Msa0728540:CDS 40.0%
! CACAGGATTTTGCTCCTTTA+AGG - chr5_1:33258551-33258570 None:intergenic 40.0%
CTTAAAGGAGCAAAATCCTG+TGG + chr5_1:33258549-33258568 Msa0728540:three_prime_UTR 40.0%
TAAAGGAGCAAAATCCTGTG+GGG + chr5_1:33258551-33258570 Msa0728540:three_prime_UTR 40.0%
! GTGTTCTAAACCAGTGATAC+TGG - chr5_1:33258599-33258618 None:intergenic 40.0%
! GTTTATGGAGATATGGCGGA+TGG - chr5_1:33251048-33251067 None:intergenic 45.0%
GGGAGTGAAAGAAGGGTTTA+TGG - chr5_1:33251063-33251082 None:intergenic 45.0%
ACACCTCACTCACTCAACAA+TGG + chr5_1:33251154-33251173 Msa0728540:exon 45.0%
AAAGGATGAGGAAGAAGGGA+GGG - chr5_1:33251225-33251244 None:intergenic 45.0%
AAAAGGATGAGGAAGAAGGG+AGG - chr5_1:33251226-33251245 None:intergenic 45.0%
TCTGGAGAGTGAAAAGGATG+AGG - chr5_1:33251237-33251256 None:intergenic 45.0%
AGAAGGTCTGGAGAGTGAAA+AGG - chr5_1:33251243-33251262 None:intergenic 45.0%
GAAGAAAAGCGATTTCTGCG+AGG - chr5_1:33251299-33251318 None:intergenic 45.0%
GTGTTTACACTTCAAACCGG+TGG - chr5_1:33251321-33251340 None:intergenic 45.0%
TGCTGTTGCTGAGAAAGAAG+AGG + chr5_1:33251385-33251404 Msa0728540:CDS 45.0%
GAAGTTTGAGTATCAAGCCG+AGG + chr5_1:33251418-33251437 Msa0728540:CDS 45.0%
TTTGAGTATCAAGCCGAGGT+AGG + chr5_1:33251422-33251441 Msa0728540:intron 45.0%
ATAGTTCCATTGTCCGGATC+GGG - chr5_1:33252551-33252570 None:intergenic 45.0%
TACTGCAGTGATTCCGGTAT+TGG + chr5_1:33252651-33252670 Msa0728540:intron 45.0%
CTTGGAACTATTGCTCAGAG+TGG + chr5_1:33252702-33252721 Msa0728540:CDS 45.0%
CTGCATTTCTTGTTGCTGAC+AGG + chr5_1:33252911-33252930 Msa0728540:CDS 45.0%
TTCTTGTTGCTGACAGGGTA+TGG + chr5_1:33252917-33252936 Msa0728540:intron 45.0%
TGGCTTGACCAAGAATTTGG+GGG - chr5_1:33253297-33253316 None:intergenic 45.0%
TTGCCATGTATAGATGGGGA+AGG - chr5_1:33253507-33253526 None:intergenic 45.0%
AGAGTTGCTCCCTTTCAAGA+TGG - chr5_1:33254234-33254253 None:intergenic 45.0%
TTCGGTTCTTCCCCTTCTTT+AGG - chr5_1:33254485-33254504 None:intergenic 45.0%
CACACTAGTACCTCTGCTTT+CGG - chr5_1:33254503-33254522 None:intergenic 45.0%
AGGTACTAGTGTGGTCTTTC+TGG + chr5_1:33254510-33254529 Msa0728540:intron 45.0%
!! CCATATTGGCTTTGTCTCGT+TGG - chr5_1:33254663-33254682 None:intergenic 45.0%
CCAACGAGACAAAGCCAATA+TGG + chr5_1:33254660-33254679 Msa0728540:CDS 45.0%
!! TACACCTGCTTTGATGGTGT+CGG + chr5_1:33254698-33254717 Msa0728540:intron 45.0%
GACTGAGTTTCAAACTGTGC+AGG + chr5_1:33254963-33254982 Msa0728540:intron 45.0%
TTGTTGAGAGGTCCCATACT+TGG - chr5_1:33255021-33255040 None:intergenic 45.0%
GTTTACTGTGAGCGTCAAAG+CGG + chr5_1:33255130-33255149 Msa0728540:intron 45.0%
! ACCATTGAGGAGCACAAACA+AGG + chr5_1:33255411-33255430 Msa0728540:intron 45.0%
CCTTCCTCTGAATGTTTCTC+GGG + chr5_1:33255567-33255586 Msa0728540:CDS 45.0%
ATCTCCCGAGAAACATTCAG+AGG - chr5_1:33255574-33255593 None:intergenic 45.0%
TGAATGGCAACCTCGTCAAT+AGG - chr5_1:33256380-33256399 None:intergenic 45.0%
! ACAACAGCTCGGTGATAATG+TGG + chr5_1:33256629-33256648 Msa0728540:CDS 45.0%
! TTAATGAAGGCACAGGCTCT+TGG + chr5_1:33256837-33256856 Msa0728540:CDS 45.0%
! GTTTGGAGTTTATGAGAGGG+AGG + chr5_1:33256871-33256890 Msa0728540:CDS 45.0%
TGAGGACTCAATACTGTGCA+CGG - chr5_1:33257115-33257134 None:intergenic 45.0%
TGGTTCACAACACATGTCTG+TGG - chr5_1:33257205-33257224 None:intergenic 45.0%
TCAATCTGCCACAGATCTTG+CGG + chr5_1:33257233-33257252 Msa0728540:intron 45.0%
GAGAAGAAACCTCCATGAGA+CGG + chr5_1:33257340-33257359 Msa0728540:intron 45.0%
AGAAGAAACCTCCATGAGAC+GGG + chr5_1:33257341-33257360 Msa0728540:intron 45.0%
! TTTCTTTTCCCGTCTCATGG+AGG - chr5_1:33257352-33257371 None:intergenic 45.0%
TCCATGAGACGGGAAAAGAA+AGG + chr5_1:33257351-33257370 Msa0728540:intron 45.0%
CCATGAGACGGGAAAAGAAA+GGG + chr5_1:33257352-33257371 Msa0728540:intron 45.0%
CATGAGACGGGAAAAGAAAG+GGG + chr5_1:33257353-33257372 Msa0728540:intron 45.0%
ATGAGACGGGAAAAGAAAGG+GGG + chr5_1:33257354-33257373 Msa0728540:intron 45.0%
GTTACTGTGCATACATTGCC+AGG + chr5_1:33257503-33257522 Msa0728540:intron 45.0%
!! TTGGTTGATTTTGGCGACTC+AGG + chr5_1:33257711-33257730 Msa0728540:intron 45.0%
! TCTTTTGAATCAGCCTCTGC+TGG - chr5_1:33258280-33258299 None:intergenic 45.0%
GACACCTAATCTGTTGTCCA+AGG - chr5_1:33258361-33258380 None:intergenic 45.0%
! ATGCTATTTGAGGGCTGAAG+GGG - chr5_1:33258388-33258407 None:intergenic 45.0%
! CATGCTATTTGAGGGCTGAA+GGG - chr5_1:33258389-33258408 None:intergenic 45.0%
! TCATGCTATTTGAGGGCTGA+AGG - chr5_1:33258390-33258409 None:intergenic 45.0%
ATAGTGAGTGAGGCATACTG+AGG + chr5_1:33258432-33258451 Msa0728540:three_prime_UTR 45.0%
! GTTTATGGAGATATGGCGGA+TGG - chr5_1:33251048-33251067 None:intergenic 45.0%
GGGAGTGAAAGAAGGGTTTA+TGG - chr5_1:33251063-33251082 None:intergenic 45.0%
ACACCTCACTCACTCAACAA+TGG + chr5_1:33251154-33251173 Msa0728540:exon 45.0%
AAAGGATGAGGAAGAAGGGA+GGG - chr5_1:33251225-33251244 None:intergenic 45.0%
AAAAGGATGAGGAAGAAGGG+AGG - chr5_1:33251226-33251245 None:intergenic 45.0%
TCTGGAGAGTGAAAAGGATG+AGG - chr5_1:33251237-33251256 None:intergenic 45.0%
AGAAGGTCTGGAGAGTGAAA+AGG - chr5_1:33251243-33251262 None:intergenic 45.0%
GAAGAAAAGCGATTTCTGCG+AGG - chr5_1:33251299-33251318 None:intergenic 45.0%
GTGTTTACACTTCAAACCGG+TGG - chr5_1:33251321-33251340 None:intergenic 45.0%
TGCTGTTGCTGAGAAAGAAG+AGG + chr5_1:33251385-33251404 Msa0728540:CDS 45.0%
GAAGTTTGAGTATCAAGCCG+AGG + chr5_1:33251418-33251437 Msa0728540:CDS 45.0%
TTTGAGTATCAAGCCGAGGT+AGG + chr5_1:33251422-33251441 Msa0728540:intron 45.0%
ATAGTTCCATTGTCCGGATC+GGG - chr5_1:33252551-33252570 None:intergenic 45.0%
TACTGCAGTGATTCCGGTAT+TGG + chr5_1:33252651-33252670 Msa0728540:intron 45.0%
CTTGGAACTATTGCTCAGAG+TGG + chr5_1:33252702-33252721 Msa0728540:CDS 45.0%
CTGCATTTCTTGTTGCTGAC+AGG + chr5_1:33252911-33252930 Msa0728540:CDS 45.0%
TTCTTGTTGCTGACAGGGTA+TGG + chr5_1:33252917-33252936 Msa0728540:intron 45.0%
TGGCTTGACCAAGAATTTGG+GGG - chr5_1:33253297-33253316 None:intergenic 45.0%
TTGCCATGTATAGATGGGGA+AGG - chr5_1:33253507-33253526 None:intergenic 45.0%
AGAGTTGCTCCCTTTCAAGA+TGG - chr5_1:33254234-33254253 None:intergenic 45.0%
TTCGGTTCTTCCCCTTCTTT+AGG - chr5_1:33254485-33254504 None:intergenic 45.0%
CACACTAGTACCTCTGCTTT+CGG - chr5_1:33254503-33254522 None:intergenic 45.0%
AGGTACTAGTGTGGTCTTTC+TGG + chr5_1:33254510-33254529 Msa0728540:intron 45.0%
!! CCATATTGGCTTTGTCTCGT+TGG - chr5_1:33254663-33254682 None:intergenic 45.0%
CCAACGAGACAAAGCCAATA+TGG + chr5_1:33254660-33254679 Msa0728540:CDS 45.0%
!! TACACCTGCTTTGATGGTGT+CGG + chr5_1:33254698-33254717 Msa0728540:intron 45.0%
GACTGAGTTTCAAACTGTGC+AGG + chr5_1:33254963-33254982 Msa0728540:intron 45.0%
TTGTTGAGAGGTCCCATACT+TGG - chr5_1:33255021-33255040 None:intergenic 45.0%
GTTTACTGTGAGCGTCAAAG+CGG + chr5_1:33255130-33255149 Msa0728540:intron 45.0%
! ACCATTGAGGAGCACAAACA+AGG + chr5_1:33255411-33255430 Msa0728540:intron 45.0%
CCTTCCTCTGAATGTTTCTC+GGG + chr5_1:33255567-33255586 Msa0728540:CDS 45.0%
ATCTCCCGAGAAACATTCAG+AGG - chr5_1:33255574-33255593 None:intergenic 45.0%
TGAATGGCAACCTCGTCAAT+AGG - chr5_1:33256380-33256399 None:intergenic 45.0%
! ACAACAGCTCGGTGATAATG+TGG + chr5_1:33256629-33256648 Msa0728540:CDS 45.0%
! TTAATGAAGGCACAGGCTCT+TGG + chr5_1:33256837-33256856 Msa0728540:CDS 45.0%
! GTTTGGAGTTTATGAGAGGG+AGG + chr5_1:33256871-33256890 Msa0728540:CDS 45.0%
TGAGGACTCAATACTGTGCA+CGG - chr5_1:33257115-33257134 None:intergenic 45.0%
TGGTTCACAACACATGTCTG+TGG - chr5_1:33257205-33257224 None:intergenic 45.0%
TCAATCTGCCACAGATCTTG+CGG + chr5_1:33257233-33257252 Msa0728540:intron 45.0%
GAGAAGAAACCTCCATGAGA+CGG + chr5_1:33257340-33257359 Msa0728540:intron 45.0%
AGAAGAAACCTCCATGAGAC+GGG + chr5_1:33257341-33257360 Msa0728540:intron 45.0%
! TTTCTTTTCCCGTCTCATGG+AGG - chr5_1:33257352-33257371 None:intergenic 45.0%
TCCATGAGACGGGAAAAGAA+AGG + chr5_1:33257351-33257370 Msa0728540:intron 45.0%
CCATGAGACGGGAAAAGAAA+GGG + chr5_1:33257352-33257371 Msa0728540:intron 45.0%
CATGAGACGGGAAAAGAAAG+GGG + chr5_1:33257353-33257372 Msa0728540:intron 45.0%
ATGAGACGGGAAAAGAAAGG+GGG + chr5_1:33257354-33257373 Msa0728540:intron 45.0%
GTTACTGTGCATACATTGCC+AGG + chr5_1:33257503-33257522 Msa0728540:intron 45.0%
!! TTGGTTGATTTTGGCGACTC+AGG + chr5_1:33257711-33257730 Msa0728540:intron 45.0%
! TCTTTTGAATCAGCCTCTGC+TGG - chr5_1:33258280-33258299 None:intergenic 45.0%
GACACCTAATCTGTTGTCCA+AGG - chr5_1:33258361-33258380 None:intergenic 45.0%
! ATGCTATTTGAGGGCTGAAG+GGG - chr5_1:33258388-33258407 None:intergenic 45.0%
! CATGCTATTTGAGGGCTGAA+GGG - chr5_1:33258389-33258408 None:intergenic 45.0%
! TCATGCTATTTGAGGGCTGA+AGG - chr5_1:33258390-33258409 None:intergenic 45.0%
ATAGTGAGTGAGGCATACTG+AGG + chr5_1:33258432-33258451 Msa0728540:three_prime_UTR 45.0%
!!! TTATTATTTTTTTAATTATC+AGG + chr5_1:33257481-33257500 Msa0728540:intron 5.0%
!!! TATAAATTTTTTGTTTTTTT+AGG + chr5_1:33257978-33257997 Msa0728540:intron 5.0%
!!! TTATTATTTTTTTAATTATC+AGG + chr5_1:33257481-33257500 Msa0728540:intron 5.0%
!!! TATAAATTTTTTGTTTTTTT+AGG + chr5_1:33257978-33257997 Msa0728540:intron 5.0%
GAGCCATTGTTGAGTGAGTG+AGG - chr5_1:33251160-33251179 None:intergenic 50.0%
!! TGGGAGAAAAGCGCTTCTGA+GGG - chr5_1:33251270-33251289 None:intergenic 50.0%
AAGCGATTTCTGCGAGGTTG+CGG - chr5_1:33251293-33251312 None:intergenic 50.0%
CACCATGACAGAAGACGAAC+CGG + chr5_1:33251338-33251357 Msa0728540:CDS 50.0%
CCTCACAACGGACAGAAAGT+CGG - chr5_1:33251364-33251383 None:intergenic 50.0%
CCAAAAACCACGACCCAGAA+GGG - chr5_1:33251480-33251499 None:intergenic 50.0%
TCCAAAAACCACGACCCAGA+AGG - chr5_1:33251481-33251500 None:intergenic 50.0%
GTGACTGAGCCTTCATTGCT+TGG + chr5_1:33252494-33252513 Msa0728540:CDS 50.0%
CCAGACTCTCCAAGCAATGA+AGG - chr5_1:33252506-33252525 None:intergenic 50.0%
CCTTCATTGCTTGGAGAGTC+TGG + chr5_1:33252503-33252522 Msa0728540:CDS 50.0%
! CCACGGTGTAGAAGCTTTTC+AGG - chr5_1:33253122-33253141 None:intergenic 50.0%
CCTGAAAAGCTTCTACACCG+TGG + chr5_1:33253119-33253138 Msa0728540:CDS 50.0%
AGGGTTACCCAGCAAGCTAA+AGG - chr5_1:33254105-33254124 None:intergenic 50.0%
GTGCTGCCCTGAACTTACTT+AGG + chr5_1:33254153-33254172 Msa0728540:intron 50.0%
!! CGAAAGCAGAGGTACTAGTG+TGG + chr5_1:33254501-33254520 Msa0728540:intron 50.0%
!! ACACCTGCTTTGATGGTGTC+GGG + chr5_1:33254699-33254718 Msa0728540:intron 50.0%
GTTTCAAACTGTGCAGGGTG+AGG + chr5_1:33254969-33254988 Msa0728540:intron 50.0%
!! GCCTTGTTTGTGCTCCTCAA+TGG - chr5_1:33255415-33255434 None:intergenic 50.0%
! CTTGAGCTTTGTGAAGGGTG+TGG + chr5_1:33255531-33255550 Msa0728540:CDS 50.0%
CCCGAGAAACATTCAGAGGA+AGG - chr5_1:33255570-33255589 None:intergenic 50.0%
ACGAGGATGAGGTCAAAGAG+AGG + chr5_1:33256565-33256584 Msa0728540:CDS 50.0%
CGAGGATGAGGTCAAAGAGA+GGG + chr5_1:33256566-33256585 Msa0728540:CDS 50.0%
TCTCCGTGTGTGCTTGTATC+TGG + chr5_1:33256684-33256703 Msa0728540:CDS 50.0%
TCTTGGAGACCAGGCAAGTT+TGG + chr5_1:33256854-33256873 Msa0728540:CDS 50.0%
ATGTCTGTGGCAGCTCAGAA+CGG - chr5_1:33257192-33257211 None:intergenic 50.0%
GATCTGTGGCAGATTGACAC+CGG - chr5_1:33257230-33257249 None:intergenic 50.0%
AACCAAAGCCGCAAGATCTG+TGG - chr5_1:33257244-33257263 None:intergenic 50.0%
! CCCTTTCTTTTCCCGTCTCA+TGG - chr5_1:33257355-33257374 None:intergenic 50.0%
!! AGGGGGCGTCAAAATAACAG+AGG + chr5_1:33257371-33257390 Msa0728540:intron 50.0%
!! GGGGGCGTCAAAATAACAGA+GGG + chr5_1:33257372-33257391 Msa0728540:intron 50.0%
GGGAGAAACCTCCATGAGAA+AGG + chr5_1:33257392-33257411 Msa0728540:intron 50.0%
TCTCTTTGCTTCGCTGCTGT+CGG - chr5_1:33258022-33258041 None:intergenic 50.0%
ATGGGGTAGAACCGAAGAAG+AGG + chr5_1:33258246-33258265 Msa0728540:CDS 50.0%
TGGGGTAGAACCGAAGAAGA+GGG + chr5_1:33258247-33258266 Msa0728540:CDS 50.0%
TGGTGCATCTCCCTCTTCTT+CGG - chr5_1:33258260-33258279 None:intergenic 50.0%
GCATACTGAGGCAGTAGGTA+AGG + chr5_1:33258444-33258463 Msa0728540:three_prime_UTR 50.0%
TGAGGCAGTAGGTAAGGAGA+GGG + chr5_1:33258450-33258469 Msa0728540:three_prime_UTR 50.0%
TTTATTGGGAAAGGCCCCAC+AGG - chr5_1:33258568-33258587 None:intergenic 50.0%
GAGCCATTGTTGAGTGAGTG+AGG - chr5_1:33251160-33251179 None:intergenic 50.0%
!! TGGGAGAAAAGCGCTTCTGA+GGG - chr5_1:33251270-33251289 None:intergenic 50.0%
AAGCGATTTCTGCGAGGTTG+CGG - chr5_1:33251293-33251312 None:intergenic 50.0%
CACCATGACAGAAGACGAAC+CGG + chr5_1:33251338-33251357 Msa0728540:CDS 50.0%
CCTCACAACGGACAGAAAGT+CGG - chr5_1:33251364-33251383 None:intergenic 50.0%
CCAAAAACCACGACCCAGAA+GGG - chr5_1:33251480-33251499 None:intergenic 50.0%
TCCAAAAACCACGACCCAGA+AGG - chr5_1:33251481-33251500 None:intergenic 50.0%
GTGACTGAGCCTTCATTGCT+TGG + chr5_1:33252494-33252513 Msa0728540:CDS 50.0%
CCAGACTCTCCAAGCAATGA+AGG - chr5_1:33252506-33252525 None:intergenic 50.0%
CCTTCATTGCTTGGAGAGTC+TGG + chr5_1:33252503-33252522 Msa0728540:CDS 50.0%
! CCACGGTGTAGAAGCTTTTC+AGG - chr5_1:33253122-33253141 None:intergenic 50.0%
CCTGAAAAGCTTCTACACCG+TGG + chr5_1:33253119-33253138 Msa0728540:CDS 50.0%
AGGGTTACCCAGCAAGCTAA+AGG - chr5_1:33254105-33254124 None:intergenic 50.0%
GTGCTGCCCTGAACTTACTT+AGG + chr5_1:33254153-33254172 Msa0728540:intron 50.0%
!! CGAAAGCAGAGGTACTAGTG+TGG + chr5_1:33254501-33254520 Msa0728540:intron 50.0%
!! ACACCTGCTTTGATGGTGTC+GGG + chr5_1:33254699-33254718 Msa0728540:intron 50.0%
GTTTCAAACTGTGCAGGGTG+AGG + chr5_1:33254969-33254988 Msa0728540:intron 50.0%
!! GCCTTGTTTGTGCTCCTCAA+TGG - chr5_1:33255415-33255434 None:intergenic 50.0%
! CTTGAGCTTTGTGAAGGGTG+TGG + chr5_1:33255531-33255550 Msa0728540:CDS 50.0%
CCCGAGAAACATTCAGAGGA+AGG - chr5_1:33255570-33255589 None:intergenic 50.0%
ACGAGGATGAGGTCAAAGAG+AGG + chr5_1:33256565-33256584 Msa0728540:CDS 50.0%
CGAGGATGAGGTCAAAGAGA+GGG + chr5_1:33256566-33256585 Msa0728540:CDS 50.0%
TCTCCGTGTGTGCTTGTATC+TGG + chr5_1:33256684-33256703 Msa0728540:CDS 50.0%
TCTTGGAGACCAGGCAAGTT+TGG + chr5_1:33256854-33256873 Msa0728540:CDS 50.0%
ATGTCTGTGGCAGCTCAGAA+CGG - chr5_1:33257192-33257211 None:intergenic 50.0%
GATCTGTGGCAGATTGACAC+CGG - chr5_1:33257230-33257249 None:intergenic 50.0%
AACCAAAGCCGCAAGATCTG+TGG - chr5_1:33257244-33257263 None:intergenic 50.0%
! CCCTTTCTTTTCCCGTCTCA+TGG - chr5_1:33257355-33257374 None:intergenic 50.0%
!! AGGGGGCGTCAAAATAACAG+AGG + chr5_1:33257371-33257390 Msa0728540:intron 50.0%
!! GGGGGCGTCAAAATAACAGA+GGG + chr5_1:33257372-33257391 Msa0728540:intron 50.0%
GGGAGAAACCTCCATGAGAA+AGG + chr5_1:33257392-33257411 Msa0728540:intron 50.0%
TCTCTTTGCTTCGCTGCTGT+CGG - chr5_1:33258022-33258041 None:intergenic 50.0%
ATGGGGTAGAACCGAAGAAG+AGG + chr5_1:33258246-33258265 Msa0728540:CDS 50.0%
TGGGGTAGAACCGAAGAAGA+GGG + chr5_1:33258247-33258266 Msa0728540:CDS 50.0%
TGGTGCATCTCCCTCTTCTT+CGG - chr5_1:33258260-33258279 None:intergenic 50.0%
GCATACTGAGGCAGTAGGTA+AGG + chr5_1:33258444-33258463 Msa0728540:three_prime_UTR 50.0%
TGAGGCAGTAGGTAAGGAGA+GGG + chr5_1:33258450-33258469 Msa0728540:three_prime_UTR 50.0%
TTTATTGGGAAAGGCCCCAC+AGG - chr5_1:33258568-33258587 None:intergenic 50.0%
GCTACGCTTCTGCTAAGCAC+GGG - chr5_1:33251182-33251201 None:intergenic 55.0%
GGCTACGCTTCTGCTAAGCA+CGG - chr5_1:33251183-33251202 None:intergenic 55.0%
AGAAGGGAGGGAAGTGAGAG+AGG - chr5_1:33251213-33251232 None:intergenic 55.0%
TCTGAGGGTGGAAGAAGGTC+TGG - chr5_1:33251255-33251274 None:intergenic 55.0%
!! GAGAAAAGCGCTTCTGAGGG+TGG - chr5_1:33251267-33251286 None:intergenic 55.0%
!! GTGGGAGAAAAGCGCTTCTG+AGG - chr5_1:33251271-33251290 None:intergenic 55.0%
GATTTCTGCGAGGTTGCGGT+GGG - chr5_1:33251289-33251308 None:intergenic 55.0%
ACAACGGACAGAAAGTCGGC+CGG - chr5_1:33251360-33251379 None:intergenic 55.0%
CCGACTTTCTGTCCGTTGTG+AGG + chr5_1:33251361-33251380 Msa0728540:CDS 55.0%
CAGCAACAGCAGCCTCACAA+CGG - chr5_1:33251376-33251395 None:intergenic 55.0%
GCTGAGAAAGAAGAGGCCAG+TGG + chr5_1:33251392-33251411 Msa0728540:CDS 55.0%
CACGACCCAGAAGGGCAAAA+AGG - chr5_1:33251472-33251491 None:intergenic 55.0%
! CTTTTTGCCCTTCTGGGTCG+TGG + chr5_1:33251470-33251489 Msa0728540:intron 55.0%
! CCCTTCTGGGTCGTGGTTTT+TGG + chr5_1:33251477-33251496 Msa0728540:intron 55.0%
GTTGCAGGTGAGCCGATTGA+TGG + chr5_1:33251550-33251569 Msa0728540:intron 55.0%
GATTCGCATCAAGCCCGATC+CGG + chr5_1:33252535-33252554 Msa0728540:CDS 55.0%
ATCAAGCCCGATCCGGACAA+TGG + chr5_1:33252542-33252561 Msa0728540:CDS 55.0%
GTTGCTGACAGGGTATGGTG+TGG + chr5_1:33252922-33252941 Msa0728540:intron 55.0%
AGGGGAAGAACCGAAAGCAG+AGG + chr5_1:33254490-33254509 Msa0728540:CDS 55.0%
CATCCCGACACCATCAAAGC+AGG - chr5_1:33254705-33254724 None:intergenic 55.0%
TTGGGATGCATCGAGGACAG+TGG + chr5_1:33255964-33255983 Msa0728540:CDS 55.0%
TCTCTCAGGTGACGAGGATG+AGG + chr5_1:33256554-33256573 Msa0728540:intron 55.0%
CATGGTTGCCTTGAGGACAG+TGG - chr5_1:33257154-33257173 None:intergenic 55.0%
GGTTGTGCATGGTTGCCTTG+AGG - chr5_1:33257161-33257180 None:intergenic 55.0%
GTGGCAGATTGACACCGGAT+TGG - chr5_1:33257225-33257244 None:intergenic 55.0%
TGCCACAGATCTTGCGGCTT+TGG + chr5_1:33257239-33257258 Msa0728540:intron 55.0%
CTGTGCATACATTGCCAGGC+CGG + chr5_1:33257507-33257526 Msa0728540:intron 55.0%
CTCTTTGCTTCGCTGCTGTC+GGG - chr5_1:33258021-33258040 None:intergenic 55.0%
!! TGGAATGATGGCGTTGGCCT+TGG + chr5_1:33258216-33258235 Msa0728540:CDS 55.0%
!! GGAATGATGGCGTTGGCCTT+GGG + chr5_1:33258217-33258236 Msa0728540:CDS 55.0%
!! GTTGGCCTTGGGAGGAAGAT+GGG + chr5_1:33258228-33258247 Msa0728540:CDS 55.0%
!! TTGGCCTTGGGAGGAAGATG+GGG + chr5_1:33258229-33258248 Msa0728540:CDS 55.0%
TCTACCCCATCTTCCTCCCA+AGG - chr5_1:33258236-33258255 None:intergenic 55.0%
GTGAGGCATACTGAGGCAGT+AGG + chr5_1:33258439-33258458 Msa0728540:three_prime_UTR 55.0%
CTGAGGCAGTAGGTAAGGAG+AGG + chr5_1:33258449-33258468 Msa0728540:three_prime_UTR 55.0%
GCAGTAGGTAAGGAGAGGGA+GGG + chr5_1:33258454-33258473 Msa0728540:three_prime_UTR 55.0%
GCTACGCTTCTGCTAAGCAC+GGG - chr5_1:33251182-33251201 None:intergenic 55.0%
GGCTACGCTTCTGCTAAGCA+CGG - chr5_1:33251183-33251202 None:intergenic 55.0%
AGAAGGGAGGGAAGTGAGAG+AGG - chr5_1:33251213-33251232 None:intergenic 55.0%
TCTGAGGGTGGAAGAAGGTC+TGG - chr5_1:33251255-33251274 None:intergenic 55.0%
!! GAGAAAAGCGCTTCTGAGGG+TGG - chr5_1:33251267-33251286 None:intergenic 55.0%
!! GTGGGAGAAAAGCGCTTCTG+AGG - chr5_1:33251271-33251290 None:intergenic 55.0%
GATTTCTGCGAGGTTGCGGT+GGG - chr5_1:33251289-33251308 None:intergenic 55.0%
ACAACGGACAGAAAGTCGGC+CGG - chr5_1:33251360-33251379 None:intergenic 55.0%
CCGACTTTCTGTCCGTTGTG+AGG + chr5_1:33251361-33251380 Msa0728540:CDS 55.0%
CAGCAACAGCAGCCTCACAA+CGG - chr5_1:33251376-33251395 None:intergenic 55.0%
GCTGAGAAAGAAGAGGCCAG+TGG + chr5_1:33251392-33251411 Msa0728540:CDS 55.0%
CACGACCCAGAAGGGCAAAA+AGG - chr5_1:33251472-33251491 None:intergenic 55.0%
! CTTTTTGCCCTTCTGGGTCG+TGG + chr5_1:33251470-33251489 Msa0728540:intron 55.0%
! CCCTTCTGGGTCGTGGTTTT+TGG + chr5_1:33251477-33251496 Msa0728540:intron 55.0%
GTTGCAGGTGAGCCGATTGA+TGG + chr5_1:33251550-33251569 Msa0728540:intron 55.0%
GATTCGCATCAAGCCCGATC+CGG + chr5_1:33252535-33252554 Msa0728540:CDS 55.0%
ATCAAGCCCGATCCGGACAA+TGG + chr5_1:33252542-33252561 Msa0728540:CDS 55.0%
GTTGCTGACAGGGTATGGTG+TGG + chr5_1:33252922-33252941 Msa0728540:intron 55.0%
AGGGGAAGAACCGAAAGCAG+AGG + chr5_1:33254490-33254509 Msa0728540:CDS 55.0%
CATCCCGACACCATCAAAGC+AGG - chr5_1:33254705-33254724 None:intergenic 55.0%
TTGGGATGCATCGAGGACAG+TGG + chr5_1:33255964-33255983 Msa0728540:CDS 55.0%
TCTCTCAGGTGACGAGGATG+AGG + chr5_1:33256554-33256573 Msa0728540:intron 55.0%
CATGGTTGCCTTGAGGACAG+TGG - chr5_1:33257154-33257173 None:intergenic 55.0%
GGTTGTGCATGGTTGCCTTG+AGG - chr5_1:33257161-33257180 None:intergenic 55.0%
GTGGCAGATTGACACCGGAT+TGG - chr5_1:33257225-33257244 None:intergenic 55.0%
TGCCACAGATCTTGCGGCTT+TGG + chr5_1:33257239-33257258 Msa0728540:intron 55.0%
CTGTGCATACATTGCCAGGC+CGG + chr5_1:33257507-33257526 Msa0728540:intron 55.0%
CTCTTTGCTTCGCTGCTGTC+GGG - chr5_1:33258021-33258040 None:intergenic 55.0%
!! TGGAATGATGGCGTTGGCCT+TGG + chr5_1:33258216-33258235 Msa0728540:CDS 55.0%
!! GGAATGATGGCGTTGGCCTT+GGG + chr5_1:33258217-33258236 Msa0728540:CDS 55.0%
!! GTTGGCCTTGGGAGGAAGAT+GGG + chr5_1:33258228-33258247 Msa0728540:CDS 55.0%
!! TTGGCCTTGGGAGGAAGATG+GGG + chr5_1:33258229-33258248 Msa0728540:CDS 55.0%
TCTACCCCATCTTCCTCCCA+AGG - chr5_1:33258236-33258255 None:intergenic 55.0%
GTGAGGCATACTGAGGCAGT+AGG + chr5_1:33258439-33258458 Msa0728540:three_prime_UTR 55.0%
CTGAGGCAGTAGGTAAGGAG+AGG + chr5_1:33258449-33258468 Msa0728540:three_prime_UTR 55.0%
GCAGTAGGTAAGGAGAGGGA+GGG + chr5_1:33258454-33258473 Msa0728540:three_prime_UTR 55.0%
GGAAGTGAGAGAGGCAGTGG+CGG - chr5_1:33251204-33251223 None:intergenic 60.0%
GAGGGAAGTGAGAGAGGCAG+TGG - chr5_1:33251207-33251226 None:intergenic 60.0%
! GCGCTTCTGAGGGTGGAAGA+AGG - chr5_1:33251260-33251279 None:intergenic 60.0%
CGATTTCTGCGAGGTTGCGG+TGG - chr5_1:33251290-33251309 None:intergenic 60.0%
!! GGCCGGTTCGTCTTCTGTCA+TGG - chr5_1:33251343-33251362 None:intergenic 60.0%
! AGGACAGTGGAGAGTGCGAG+GGG - chr5_1:33257141-33257160 None:intergenic 60.0%
! GAGGACAGTGGAGAGTGCGA+GGG - chr5_1:33257142-33257161 None:intergenic 60.0%
! TGAGGACAGTGGAGAGTGCG+AGG - chr5_1:33257143-33257162 None:intergenic 60.0%
CGCACTCTCCACTGTCCTCA+AGG + chr5_1:33257143-33257162 Msa0728540:intron 60.0%
TGGCAGCTCAGAACGGAGGA+GGG - chr5_1:33257185-33257204 None:intergenic 60.0%
TCTGTGGCAGCTCAGAACGG+AGG - chr5_1:33257189-33257208 None:intergenic 60.0%
!!! CAGTTTTGGGACAACCGGCC+TGG - chr5_1:33257524-33257543 None:intergenic 60.0%
!! GCTGTCGGGAGCATTCTTGC+AGG - chr5_1:33258007-33258026 None:intergenic 60.0%
CCTAACTCAGCAGGGCTCTC+AGG - chr5_1:33258184-33258203 None:intergenic 60.0%
CCTGAGAGCCCTGCTGAGTT+AGG + chr5_1:33258181-33258200 Msa0728540:CDS 60.0%
!! ATGATGGCGTTGGCCTTGGG+AGG + chr5_1:33258220-33258239 Msa0728540:CDS 60.0%
!! CGTTGGCCTTGGGAGGAAGA+TGG + chr5_1:33258227-33258246 Msa0728540:CDS 60.0%
AGAGGGAGATGCACCAGCAG+AGG + chr5_1:33258264-33258283 Msa0728540:CDS 60.0%
GGCAGTAGGTAAGGAGAGGG+AGG + chr5_1:33258453-33258472 Msa0728540:three_prime_UTR 60.0%
GGAAGTGAGAGAGGCAGTGG+CGG - chr5_1:33251204-33251223 None:intergenic 60.0%
GAGGGAAGTGAGAGAGGCAG+TGG - chr5_1:33251207-33251226 None:intergenic 60.0%
! GCGCTTCTGAGGGTGGAAGA+AGG - chr5_1:33251260-33251279 None:intergenic 60.0%
CGATTTCTGCGAGGTTGCGG+TGG - chr5_1:33251290-33251309 None:intergenic 60.0%
!! GGCCGGTTCGTCTTCTGTCA+TGG - chr5_1:33251343-33251362 None:intergenic 60.0%
! AGGACAGTGGAGAGTGCGAG+GGG - chr5_1:33257141-33257160 None:intergenic 60.0%
! GAGGACAGTGGAGAGTGCGA+GGG - chr5_1:33257142-33257161 None:intergenic 60.0%
! TGAGGACAGTGGAGAGTGCG+AGG - chr5_1:33257143-33257162 None:intergenic 60.0%
CGCACTCTCCACTGTCCTCA+AGG + chr5_1:33257143-33257162 Msa0728540:intron 60.0%
TGGCAGCTCAGAACGGAGGA+GGG - chr5_1:33257185-33257204 None:intergenic 60.0%
TCTGTGGCAGCTCAGAACGG+AGG - chr5_1:33257189-33257208 None:intergenic 60.0%
!!! CAGTTTTGGGACAACCGGCC+TGG - chr5_1:33257524-33257543 None:intergenic 60.0%
!! GCTGTCGGGAGCATTCTTGC+AGG - chr5_1:33258007-33258026 None:intergenic 60.0%
CCTAACTCAGCAGGGCTCTC+AGG - chr5_1:33258184-33258203 None:intergenic 60.0%
CCTGAGAGCCCTGCTGAGTT+AGG + chr5_1:33258181-33258200 Msa0728540:CDS 60.0%
!! ATGATGGCGTTGGCCTTGGG+AGG + chr5_1:33258220-33258239 Msa0728540:CDS 60.0%
!! CGTTGGCCTTGGGAGGAAGA+TGG + chr5_1:33258227-33258246 Msa0728540:CDS 60.0%
AGAGGGAGATGCACCAGCAG+AGG + chr5_1:33258264-33258283 Msa0728540:CDS 60.0%
GGCAGTAGGTAAGGAGAGGG+AGG + chr5_1:33258453-33258472 Msa0728540:three_prime_UTR 60.0%
GGCACAGGCTCTTGGAGACC+AGG + chr5_1:33256845-33256864 Msa0728540:CDS 65.0%
! GACAGTGGAGAGTGCGAGGG+GGG - chr5_1:33257139-33257158 None:intergenic 65.0%
! GGACAGTGGAGAGTGCGAGG+GGG - chr5_1:33257140-33257159 None:intergenic 65.0%
CGGAGGAGGGTGGTTGTGCA+TGG - chr5_1:33257172-33257191 None:intergenic 65.0%
CAGCTCAGAACGGAGGAGGG+TGG - chr5_1:33257182-33257201 None:intergenic 65.0%
GTGGCAGCTCAGAACGGAGG+AGG - chr5_1:33257186-33257205 None:intergenic 65.0%
GGCACAGGCTCTTGGAGACC+AGG + chr5_1:33256845-33256864 Msa0728540:CDS 65.0%
! GACAGTGGAGAGTGCGAGGG+GGG - chr5_1:33257139-33257158 None:intergenic 65.0%
! GGACAGTGGAGAGTGCGAGG+GGG - chr5_1:33257140-33257159 None:intergenic 65.0%
CGGAGGAGGGTGGTTGTGCA+TGG - chr5_1:33257172-33257191 None:intergenic 65.0%
CAGCTCAGAACGGAGGAGGG+TGG - chr5_1:33257182-33257201 None:intergenic 65.0%
GTGGCAGCTCAGAACGGAGG+AGG - chr5_1:33257186-33257205 None:intergenic 65.0%
! GGAGAGTGCGAGGGGGGATG+AGG - chr5_1:33257133-33257152 None:intergenic 70.0%
! GGAGAGTGCGAGGGGGGATG+AGG - chr5_1:33257133-33257152 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 33251033 33258726 33251033 ID=Msa0728540;Name=Msa0728540
chr5_1 mRNA 33251033 33258726 33251033 ID=Msa0728540-mRNA-1;Parent=Msa0728540;Name=Msa0728540-mRNA-1;_AED=0.06;_eAED=0.06;_QI=140|1|1|1|1|1|19|351|791
chr5_1 exon 33251033 33251439 33251033 ID=Msa0728540-mRNA-1:exon:10647;Parent=Msa0728540-mRNA-1
chr5_1 exon 33251557 33251630 33251557 ID=Msa0728540-mRNA-1:exon:10648;Parent=Msa0728540-mRNA-1
chr5_1 exon 33252454 33252579 33252454 ID=Msa0728540-mRNA-1:exon:10649;Parent=Msa0728540-mRNA-1
chr5_1 exon 33252659 33252752 33252659 ID=Msa0728540-mRNA-1:exon:10650;Parent=Msa0728540-mRNA-1
chr5_1 exon 33252850 33252933 33252850 ID=Msa0728540-mRNA-1:exon:10651;Parent=Msa0728540-mRNA-1
chr5_1 exon 33253023 33253166 33253023 ID=Msa0728540-mRNA-1:exon:10652;Parent=Msa0728540-mRNA-1
chr5_1 exon 33253431 33253547 33253431 ID=Msa0728540-mRNA-1:exon:10653;Parent=Msa0728540-mRNA-1
chr5_1 exon 33254464 33254511 33254464 ID=Msa0728540-mRNA-1:exon:10654;Parent=Msa0728540-mRNA-1
chr5_1 exon 33254602 33254682 33254602 ID=Msa0728540-mRNA-1:exon:10655;Parent=Msa0728540-mRNA-1
chr5_1 exon 33254799 33254903 33254799 ID=Msa0728540-mRNA-1:exon:10656;Parent=Msa0728540-mRNA-1
chr5_1 exon 33254985 33255125 33254985 ID=Msa0728540-mRNA-1:exon:10657;Parent=Msa0728540-mRNA-1
chr5_1 exon 33255520 33255612 33255520 ID=Msa0728540-mRNA-1:exon:10658;Parent=Msa0728540-mRNA-1
chr5_1 exon 33255760 33255837 33255760 ID=Msa0728540-mRNA-1:exon:10659;Parent=Msa0728540-mRNA-1
chr5_1 exon 33255922 33256176 33255922 ID=Msa0728540-mRNA-1:exon:10660;Parent=Msa0728540-mRNA-1
chr5_1 exon 33256359 33256461 33256359 ID=Msa0728540-mRNA-1:exon:10661;Parent=Msa0728540-mRNA-1
chr5_1 exon 33256562 33256736 33256562 ID=Msa0728540-mRNA-1:exon:10662;Parent=Msa0728540-mRNA-1
chr5_1 exon 33256836 33256941 33256836 ID=Msa0728540-mRNA-1:exon:10663;Parent=Msa0728540-mRNA-1
chr5_1 exon 33258000 33258089 33258000 ID=Msa0728540-mRNA-1:exon:10664;Parent=Msa0728540-mRNA-1
chr5_1 exon 33258181 33258726 33258181 ID=Msa0728540-mRNA-1:exon:10665;Parent=Msa0728540-mRNA-1
chr5_1 five_prime_UTR 33251033 33251172 33251033 ID=Msa0728540-mRNA-1:five_prime_utr;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33251173 33251439 33251173 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33251557 33251630 33251557 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33252454 33252579 33252454 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33252659 33252752 33252659 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33252850 33252933 33252850 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33253023 33253166 33253023 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33253431 33253547 33253431 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33254464 33254511 33254464 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33254602 33254682 33254602 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33254799 33254903 33254799 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33254985 33255125 33254985 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33255520 33255612 33255520 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33255760 33255837 33255760 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33255922 33256176 33255922 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33256359 33256461 33256359 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33256562 33256736 33256562 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33256836 33256941 33256836 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33258000 33258089 33258000 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 CDS 33258181 33258375 33258181 ID=Msa0728540-mRNA-1:cds;Parent=Msa0728540-mRNA-1
chr5_1 three_prime_UTR 33258376 33258726 33258376 ID=Msa0728540-mRNA-1:three_prime_utr;Parent=Msa0728540-mRNA-1
Gene Sequence

>Msa0728540

ATGGCTCCCGTGCTTAGCAGAAGCGTAGCCGCCACTGCCTCTCTCACTTCCCTCCCTTCTTCCTCATCCTTTTCACTCTCCAGACCTTCTTCCACCCTCAGAAGCGCTTTTCTCCCACCGCAACCTCGCAGAAATCGCTTTTCTTCCACCGGTTTGAAGTGTAAACACCATGACAGAAGACGAACCGGCCGACTTTCTGTCCGTTGTGAGGCTGCTGTTGCTGAGAAAGAAGAGGCCAGTGGTGAGAAGTTTGAGTATCAAGCCGAGGTGAGCCGATTGATGGATTTGATTGTTCACAGTCTGTATAGTCACAAGGAAGTTTTTCTCAGAGAACTTGTGAGTAATGCTAGTGATGCTTTGGACAAATTGAGGTTTTTAAGTGTGACTGAGCCTTCATTGCTTGGAGAGTCTGGAGAATTAGCGATTCGCATCAAGCCCGATCCGGACAATGGAACTATTACTATAACTGATTCCGGTATTGGAATGACCAAAGAAGAGCTCATTGATTGTCTTGGAACTATTGCTCAGAGTGGTACCTCAAAGTTTTTGAAGGCACTTAAGGAAAACAAGGATTTAGGAGCAGATAATGGATTGATTGGTCAATTTGGTGTTGGATTCTACTCTGCATTTCTTGTTGCTGACAGGGTTGTTGTCTCTACAAAGAGCCCTAGATCAGATAAGCAATATGTATGGGAAGCTGTAGCTGATAGCAGCTCTTATGTGATAAGGGAAGAAACTGATCCTGAAAAGCTTCTACACCGTGGTACACAGATTACACTTCACTTGAGACCGGATGATAAGTATGAATTCTCAGAGCCAACCAAAATTCAGAGTTTGGTGAAGAACTACTCGCAGTTTGTTTCCTTCCCCATCTATACATGGCAAGAAAAATCTAGAACTGTGGAGGTGGAAGAGGAAGAAGAACCTAAAGAAGGGGAAGAACCGAAAGCAGAGGGTGATACAAACAAGACAAAAAAGACTAAAACTGAGAAGTATTGGGACTGGGAATTAGCCAACGAGACAAAGCCAATATGGATGCGGAATTCAAAGGATACTCCAAGGGAAGAGTACAATGAGTTTTACAAAAAGACTTTTAATGAATTCTTGGAACCAGTTGCATATACCCACTTTACTACTGAGGGTGAGGTTGAGTTCAGAAGCATTCTATATATTCCAAGTATGGGACCTCTCAACAATGAAGAAGTAGTGAACCCTAAAACAAAGAACATACGCCTGTATGTAAAGCGTGTGTTCATCTCAGATGATTTTGATGGTGAACTGTTTCCACGTTACTTGAGCTTTGTGAAGGGTGTGGTCGATTCAAATGACCTTCCTCTGAATGTTTCTCGGGAGATCCTTCAAGAAAGCAGAATTGTAAGGATAATGAGAAAGAGACTTGTCAGGAAGACATTTGATATGATTCAAGATCTTGCTGAAGGTGAAAATAAGGAGGATTACAAGAAATTCTGGGAGAACTTTGGTAGGTTTATTAAGTTGGGATGCATCGAGGACAGTGGAAATCATAAGCGCATAACACCACTGTTGAGATTTTACACTTCCAAAAGTGAGGAGGAACTTAAAAGCCTAGATGAGTATGTTGAAAACATGGGTGAAAATCAAAATGCCATCTATTACCTAGCAACTGACAGCTTGAAAAGTGCAAAGACTGCTCCATTTTTAGAGAAGTTGGTTCAGAAAGATATTGAGGTTCTTTATTTGGTTGATCCTATTGACGAGGTTGCCATTCAGAACCTACAAACATACAAAGAAAAGAAATTTGTTGATATCAGCAAGGAAGATTTGGAATTAGGTGACGAGGATGAGGTCAAAGAGAGGGAAACCAAGCAAGAATACAATCTACTTTGTGATTGGATAAAACAACAGCTCGGTGATAATGTGGCTAAAGTTCAAGTCTCTAAGCGTTTGAGCTCATCTCCGTGTGTGCTTGTATCTGGAAAGTTTGGTTGGTCTGCAAATATGGAAAGATTAATGAAGGCACAGGCTCTTGGAGACCAGGCAAGTTTGGAGTTTATGAGAGGGAGGAGAATATTGGAGATTAATCCAGATCATCCCATCATCAAAGATTTAAGTGCTGCCTGCAAGAATGCTCCCGACAGCAGCGAAGCAAAGAGAGCTGTTGAGCTCTTATATGATACAGCACAAATTTCTAGTGGATTTTCTCCTGAGAGCCCTGCTGAGTTAGGAAATAAGATTTATGGAATGATGGCGTTGGCCTTGGGAGGAAGATGGGGTAGAACCGAAGAAGAGGGAGATGCACCAGCAGAGGCTGATTCAAAAGAAAGTGAAAGTACAGAGGCTGAAGTTTTTGAACCTTCTGAAGTCATAGCAGAAAATGATCCTTGGACAACAGATTAG
Protein sequence

>Msa0728540

MAPVLSRSVAATASLTSLPSSSSFSLSRPSSTLRSAFLPPQPRRNRFSSTGLKCKHHDRRRTGRLSVRCEAAVAEKEEASGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGESGELAIRIKPDPDNGTITITDSGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVADRVVVSTKSPRSDKQYVWEAVADSSSYVIREETDPEKLLHRGTQITLHLRPDDKYEFSEPTKIQSLVKNYSQFVSFPIYTWQEKSRTVEVEEEEEPKEGEEPKAEGDTNKTKKTKTEKYWDWELANETKPIWMRNSKDTPREEYNEFYKKTFNEFLEPVAYTHFTTEGEVEFRSILYIPSMGPLNNEEVVNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDLAEGENKEDYKKFWENFGRFIKLGCIEDSGNHKRITPLLRFYTSKSEEELKSLDEYVENMGENQNAIYYLATDSLKSAKTAPFLEKLVQKDIEVLYLVDPIDEVAIQNLQTYKEKKFVDISKEDLELGDEDEVKERETKQEYNLLCDWIKQQLGDNVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDQASLEFMRGRRILEINPDHPIIKDLSAACKNAPDSSEAKRAVELLYDTAQISSGFSPESPAELGNKIYGMMALALGGRWGRTEEEGDAPAEADSKESESTEAEVFEPSEVIAENDPWTTD*