Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0102900 | XP_013466196.1 | 92.269 | 789 | 50 | 4 | 1 | 779 | 1 | 788 | 0.0 | 1488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0102900 | sp|Q9XIL5|PP154_ARATH | 53.741 | 802 | 330 | 8 | 14 | 778 | 39 | 836 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0102900 | A0A072VEK1 | 92.269 | 789 | 50 | 4 | 1 | 779 | 1 | 788 | 0.0 | 1488 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0102900 | 0.815349 | 9.677325e-52 | -8.615850e-47 |
| Msa0003470 | Msa0102900 | 0.821156 | 4.689176e-53 | -8.615850e-47 |
| Msa0008850 | Msa0102900 | 0.832629 | 8.478069e-56 | -8.615850e-47 |
| Msa0017120 | Msa0102900 | 0.808704 | 2.717684e-50 | -8.615850e-47 |
| Msa0017940 | Msa0102900 | 0.806381 | 8.458257e-50 | -8.615850e-47 |
| Msa0020630 | Msa0102900 | 0.801460 | 8.912468e-49 | -8.615850e-47 |
| Msa0024680 | Msa0102900 | 0.812222 | 4.726334e-51 | -8.615850e-47 |
| Msa0027540 | Msa0102900 | 0.852671 | 3.962572e-61 | -8.615850e-47 |
| Msa0029620 | Msa0102900 | 0.816910 | 4.333192e-52 | -8.615850e-47 |
| Msa0030000 | Msa0102900 | 0.803214 | 3.879207e-49 | -8.615850e-47 |
| Msa0030380 | Msa0102900 | 0.807475 | 4.963656e-50 | -8.615850e-47 |
| Msa0037820 | Msa0102900 | 0.819144 | 1.354729e-52 | -8.615850e-47 |
| Msa0044710 | Msa0102900 | 0.832364 | 9.860928e-56 | -8.615850e-47 |
| Msa0049400 | Msa0102900 | -0.824324 | 8.584201e-54 | -8.615850e-47 |
| Msa0050720 | Msa0102900 | 0.811097 | 8.299720e-51 | -8.615850e-47 |
| Msa0057260 | Msa0102900 | 0.806673 | 7.339703e-50 | -8.615850e-47 |
| Msa0057690 | Msa0102900 | 0.814770 | 1.300661e-51 | -8.615850e-47 |
| Msa0067150 | Msa0102900 | 0.821711 | 3.491167e-53 | -8.615850e-47 |
| Msa0068410 | Msa0102900 | 0.830735 | 2.484271e-55 | -8.615850e-47 |
| Msa0075310 | Msa0102900 | 0.856355 | 3.403858e-62 | -8.615850e-47 |
| Msa0084680 | Msa0102900 | 0.847971 | 8.250057e-60 | -8.615850e-47 |
| Msa0094420 | Msa0102900 | 0.801087 | 1.062336e-48 | -8.615850e-47 |
| Msa0102900 | Msa0114250 | 0.804630 | 1.969910e-49 | -8.615850e-47 |
| Msa0102900 | Msa0120330 | 0.800128 | 1.666296e-48 | -8.615850e-47 |
| Msa0102900 | Msa0123170 | 0.801015 | 1.098979e-48 | -8.615850e-47 |
| Msa0102900 | Msa0125230 | 0.805891 | 1.072151e-49 | -8.615850e-47 |
| Msa0102900 | Msa0135980 | 0.802935 | 4.429580e-49 | -8.615850e-47 |
| Msa0102900 | Msa0141830 | 0.836995 | 6.749405e-57 | -8.615850e-47 |
| Msa0102900 | Msa0146470 | 0.807748 | 4.344312e-50 | -8.615850e-47 |
| Msa0102900 | Msa0149500 | 0.801232 | 9.922612e-49 | -8.615850e-47 |
| Msa0102900 | Msa0157020 | 0.805711 | 1.170110e-49 | -8.615850e-47 |
| Msa0102900 | Msa0158610 | 0.819179 | 1.330466e-52 | -8.615850e-47 |
| Msa0102900 | Msa0159750 | 0.804396 | 2.204111e-49 | -8.615850e-47 |
| Msa0102900 | Msa0168100 | 0.844437 | 7.562770e-59 | -8.615850e-47 |
| Msa0102900 | Msa0169620 | 0.815732 | 7.949111e-52 | -8.615850e-47 |
| Msa0102900 | Msa0173740 | 0.810317 | 1.224184e-50 | -8.615850e-47 |
| Msa0102900 | Msa0173820 | 0.811906 | 5.538702e-51 | -8.615850e-47 |
| Msa0102900 | Msa0173830 | 0.813510 | 2.468393e-51 | -8.615850e-47 |
| Msa0102900 | Msa0182930 | 0.846080 | 2.719143e-59 | -8.615850e-47 |
| Msa0102900 | Msa0183620 | 0.801899 | 7.242794e-49 | -8.615850e-47 |
| Msa0102900 | Msa0185390 | 0.842925 | 1.919678e-58 | -8.615850e-47 |
| Msa0102900 | Msa0198440 | 0.800147 | 1.651913e-48 | -8.615850e-47 |
| Msa0102900 | Msa0222070 | 0.804876 | 1.750184e-49 | -8.615850e-47 |
| Msa0102900 | Msa0222120 | 0.805967 | 1.033653e-49 | -8.615850e-47 |
| Msa0102900 | Msa0244270 | 0.819739 | 9.914078e-53 | -8.615850e-47 |
| Msa0102900 | Msa0248560 | 0.804780 | 1.832564e-49 | -8.615850e-47 |
| Msa0102900 | Msa0252180 | 0.802127 | 6.500000e-49 | -8.615850e-47 |
| Msa0102900 | Msa0259330 | 0.804644 | 1.956856e-49 | -8.615850e-47 |
| Msa0102900 | Msa0263620 | 0.805389 | 1.366601e-49 | -8.615850e-47 |
| Msa0102900 | Msa0265210 | 0.811060 | 8.456192e-51 | -8.615850e-47 |
| Msa0102900 | Msa0265580 | 0.818824 | 1.602037e-52 | -8.615850e-47 |
| Msa0102900 | Msa0282170 | 0.818287 | 2.120571e-52 | -8.615850e-47 |
| Msa0102900 | Msa0284780 | 0.835684 | 1.453907e-56 | -8.615850e-47 |
| Msa0102900 | Msa0288240 | 0.824809 | 6.599730e-54 | -8.615850e-47 |
| Msa0102900 | Msa0294780 | 0.801820 | 7.518821e-49 | -8.615850e-47 |
| Msa0102900 | Msa0297920 | 0.810864 | 9.324803e-51 | -8.615850e-47 |
| Msa0102900 | Msa0298970 | 0.828260 | 9.927106e-55 | -8.615850e-47 |
| Msa0102900 | Msa0301180 | 0.821903 | 3.151832e-53 | -8.615850e-47 |
| Msa0102900 | Msa0303440 | 0.800634 | 1.314770e-48 | -8.615850e-47 |
| Msa0102900 | Msa0314790 | 0.809649 | 1.704949e-50 | -8.615850e-47 |
| Msa0102900 | Msa0320540 | 0.807655 | 4.546127e-50 | -8.615850e-47 |
| Msa0102900 | Msa0376510 | 0.812913 | 3.336661e-51 | -8.615850e-47 |
| Msa0102900 | Msa0382500 | 0.808420 | 3.125056e-50 | -8.615850e-47 |
| Msa0102900 | Msa0388720 | 0.802999 | 4.297379e-49 | -8.615850e-47 |
| Msa0102900 | Msa0417630 | 0.809294 | 2.031278e-50 | -8.615850e-47 |
| Msa0102900 | Msa0421800 | 0.826081 | 3.298570e-54 | -8.615850e-47 |
| Msa0102900 | Msa0425050 | 0.812373 | 4.380401e-51 | -8.615850e-47 |
| Msa0102900 | Msa0432680 | 0.803444 | 3.476811e-49 | -8.615850e-47 |
| Msa0102900 | Msa0467800 | 0.832188 | 1.090043e-55 | -8.615850e-47 |
| Msa0102900 | Msa0467880 | 0.828165 | 1.046354e-54 | -8.615850e-47 |
| Msa0102900 | Msa0468160 | 0.805603 | 1.232680e-49 | -8.615850e-47 |
| Msa0102900 | Msa0469910 | -0.811053 | 8.487129e-51 | -8.615850e-47 |
| Msa0102900 | Msa0472740 | 0.816041 | 6.782628e-52 | -8.615850e-47 |
| Msa0102900 | Msa0482680 | 0.824659 | 7.161637e-54 | -8.615850e-47 |
| Msa0102900 | Msa0511720 | -0.803203 | 3.899434e-49 | -8.615850e-47 |
| Msa0102900 | Msa0514260 | 0.825137 | 5.523605e-54 | -8.615850e-47 |
| Msa0102900 | Msa0524090 | 0.823417 | 1.400966e-53 | -8.615850e-47 |
| Msa0102900 | Msa0524120 | 0.835386 | 1.729330e-56 | -8.615850e-47 |
| Msa0102900 | Msa0535450 | 0.804860 | 1.763845e-49 | -8.615850e-47 |
| Msa0102900 | Msa0546740 | 0.824604 | 7.378506e-54 | -8.615850e-47 |
| Msa0102900 | Msa0546840 | 0.810468 | 1.135465e-50 | -8.615850e-47 |
| Msa0102900 | Msa0576420 | 0.830032 | 3.689060e-55 | -8.615850e-47 |
| Msa0102900 | Msa0576600 | 0.803910 | 2.782777e-49 | -8.615850e-47 |
| Msa0102900 | Msa0577230 | 0.800591 | 1.341076e-48 | -8.615850e-47 |
| Msa0102900 | Msa0579340 | 0.807234 | 5.584598e-50 | -8.615850e-47 |
| Msa0102900 | Msa0581460 | 0.805486 | 1.304456e-49 | -8.615850e-47 |
| Msa0102900 | Msa0583740 | 0.852543 | 4.308921e-61 | -8.615850e-47 |
| Msa0102900 | Msa0590680 | 0.834014 | 3.829493e-56 | -8.615850e-47 |
| Msa0102900 | Msa0605620 | 0.807163 | 5.779712e-50 | -8.615850e-47 |
| Msa0102900 | Msa0614230 | 0.830339 | 3.105220e-55 | -8.615850e-47 |
| Msa0102900 | Msa0617830 | 0.806947 | 6.423492e-50 | -8.615850e-47 |
| Msa0102900 | Msa0618010 | 0.830184 | 3.387490e-55 | -8.615850e-47 |
| Msa0102900 | Msa0620110 | 0.801533 | 8.609306e-49 | -8.615850e-47 |
| Msa0102900 | Msa0620750 | 0.808005 | 3.831105e-50 | -8.615850e-47 |
| Msa0102900 | Msa0621120 | 0.815010 | 1.150467e-51 | -8.615850e-47 |
| Msa0102900 | Msa0638690 | 0.807705 | 4.436308e-50 | -8.615850e-47 |
| Msa0102900 | Msa0639370 | 0.811750 | 5.989461e-51 | -8.615850e-47 |
| Msa0102900 | Msa0642650 | 0.817623 | 2.995692e-52 | -8.615850e-47 |
| Msa0102900 | Msa0650650 | 0.802926 | 4.449029e-49 | -8.615850e-47 |
| Msa0102900 | Msa0669220 | 0.868340 | 7.021975e-66 | -8.615850e-47 |
| Msa0102900 | Msa0681890 | 0.816360 | 5.756260e-52 | -8.615850e-47 |
| Msa0102900 | Msa0688370 | 0.827522 | 1.493447e-54 | -8.615850e-47 |
| Msa0102900 | Msa0706600 | 0.807985 | 3.867057e-50 | -8.615850e-47 |
| Msa0102900 | Msa0707780 | 0.811181 | 7.959505e-51 | -8.615850e-47 |
| Msa0102900 | Msa0714600 | 0.804377 | 2.223869e-49 | -8.615850e-47 |
| Msa0102900 | Msa0717090 | 0.810913 | 9.100009e-51 | -8.615850e-47 |
| Msa0102900 | Msa0724050 | 0.816633 | 5.001688e-52 | -8.615850e-47 |
| Msa0102900 | Msa0728280 | 0.831556 | 1.561637e-55 | -8.615850e-47 |
| Msa0102900 | Msa0728380 | 0.845221 | 4.647906e-59 | -8.615850e-47 |
| Msa0102900 | Msa0728540 | 0.840413 | 8.828324e-58 | -8.615850e-47 |
| Msa0102900 | Msa0730180 | 0.804231 | 2.385669e-49 | -8.615850e-47 |
| Msa0102900 | Msa0743650 | 0.828087 | 1.092477e-54 | -8.615850e-47 |
| Msa0102900 | Msa0763880 | 0.814129 | 1.802408e-51 | -8.615850e-47 |
| Msa0102900 | Msa0763910 | 0.808042 | 3.760473e-50 | -8.615850e-47 |
| Msa0102900 | Msa0776480 | 0.826405 | 2.762436e-54 | -8.615850e-47 |
| Msa0102900 | Msa0792790 | -0.827232 | 1.753012e-54 | -8.615850e-47 |
| Msa0102900 | Msa0803130 | 0.805310 | 1.419950e-49 | -8.615850e-47 |
| Msa0102900 | Msa0830720 | 0.806231 | 9.095120e-50 | -8.615850e-47 |
| Msa0102900 | Msa0841490 | 0.801926 | 7.149859e-49 | -8.615850e-47 |
| Msa0102900 | Msa0843690 | 0.804213 | 2.406263e-49 | -8.615850e-47 |
| Msa0102900 | Msa0851740 | 0.800563 | 1.359054e-48 | -8.615850e-47 |
| Msa0102900 | Msa0852730 | 0.803275 | 3.768242e-49 | -8.615850e-47 |
| Msa0102900 | Msa0863770 | 0.825555 | 4.397380e-54 | -8.615850e-47 |
| Msa0102900 | Msa0877420 | 0.806892 | 6.595931e-50 | -8.615850e-47 |
| Msa0102900 | Msa0880220 | 0.816706 | 4.816616e-52 | -8.615850e-47 |
| Msa0102900 | Msa0907700 | 0.804896 | 1.733334e-49 | -8.615850e-47 |
| Msa0102900 | Msa0925160 | 0.816877 | 4.409233e-52 | -8.615850e-47 |
| Msa0102900 | Msa0931610 | 0.800994 | 1.109801e-48 | -8.615850e-47 |
| Msa0102900 | Msa0950320 | 0.807970 | 3.897039e-50 | -8.615850e-47 |
| Msa0102900 | Msa0955260 | 0.809410 | 1.918257e-50 | -8.615850e-47 |
| Msa0102900 | Msa0958020 | 0.816362 | 5.752129e-52 | -8.615850e-47 |
| Msa0102900 | Msa0990520 | 0.809811 | 1.573407e-50 | -8.615850e-47 |
| Msa0102900 | Msa1002040 | 0.825992 | 3.463093e-54 | -8.615850e-47 |
| Msa0102900 | Msa1004500 | 0.803033 | 4.228547e-49 | -8.615850e-47 |
| Msa0102900 | Msa1037060 | -0.820932 | 5.281690e-53 | -8.615850e-47 |
| Msa0102900 | Msa1038320 | 0.818531 | 1.867482e-52 | -8.615850e-47 |
| Msa0102900 | Msa1044340 | 0.811075 | 8.391911e-51 | -8.615850e-47 |
| Msa0102900 | Msa1072340 | 0.801941 | 7.099798e-49 | -8.615850e-47 |
| Msa0102900 | Msa1118150 | 0.848367 | 6.412921e-60 | -8.615850e-47 |
| Msa0102900 | Msa1130210 | -0.807418 | 5.104765e-50 | -8.615850e-47 |
| Msa0102900 | Msa1159100 | 0.801864 | 7.362629e-49 | -8.615850e-47 |
| Msa0102900 | Msa1159350 | 0.836705 | 8.000591e-57 | -8.615850e-47 |
| Msa0102900 | Msa1160570 | 0.808042 | 3.761634e-50 | -8.615850e-47 |
| Msa0102900 | Msa1164800 | -0.823285 | 1.503765e-53 | -8.615850e-47 |
| Msa0102900 | Msa1171340 | 0.801442 | 8.986042e-49 | -8.615850e-47 |
| Msa0102900 | Msa1177240 | 0.864277 | 1.365545e-64 | -8.615850e-47 |
| Msa0102900 | Msa1210770 | 0.810143 | 1.334363e-50 | -8.615850e-47 |
| Msa0102900 | Msa1220450 | -0.819045 | 1.427493e-52 | -8.615850e-47 |
| Msa0102900 | Msa1220460 | -0.812978 | 3.228969e-51 | -8.615850e-47 |
| Msa0102900 | Msa1220480 | -0.812214 | 4.743749e-51 | -8.615850e-47 |
| Msa0102900 | Msa1263590 | 0.807123 | 5.895269e-50 | -8.615850e-47 |
| Msa0102900 | Msa1263670 | 0.811579 | 6.524686e-51 | -8.615850e-47 |
| Msa0102900 | Msa1282920 | 0.803690 | 3.090715e-49 | -8.615850e-47 |
| Msa0102900 | Msa1284520 | 0.800436 | 1.442241e-48 | -8.615850e-47 |
| Msa0102900 | Msa1306580 | 0.822985 | 1.767139e-53 | -8.615850e-47 |
| Msa0102900 | Msa1315980 | 0.800299 | 1.538025e-48 | -8.615850e-47 |
| Msa0102900 | Msa1317030 | 0.846108 | 2.671366e-59 | -8.615850e-47 |
| Msa0102900 | Msa1352290 | 0.843652 | 1.228351e-58 | -8.615850e-47 |
| Msa0102900 | Msa1354040 | 0.800120 | 1.672812e-48 | -8.615850e-47 |
| Msa0102900 | Msa1365870 | 0.813925 | 1.999861e-51 | -8.615850e-47 |
| Msa0102900 | Msa1375340 | 0.816841 | 4.492772e-52 | -8.615850e-47 |
| Msa0102900 | Msa1376640 | 0.806444 | 8.201070e-50 | -8.615850e-47 |
| Msa0102900 | Msa1381130 | 0.841798 | 3.818118e-58 | -8.615850e-47 |
| Msa0102900 | Msa1382310 | 0.810120 | 1.349880e-50 | -8.615850e-47 |
| Msa0102900 | Msa1427830 | 0.839279 | 1.742339e-57 | -8.615850e-47 |
| Msa0102900 | Msa1428420 | 0.826418 | 2.742977e-54 | -8.615850e-47 |
| Msa0102900 | Msa1430600 | 0.803780 | 2.960745e-49 | -8.615850e-47 |
| Msa0102900 | Msa1431730 | 0.816285 | 5.983296e-52 | -8.615850e-47 |
| Msa0102900 | Msa1440610 | 0.808921 | 2.442011e-50 | -8.615850e-47 |
| Msa0102900 | Msa1449880 | 0.860684 | 1.739958e-63 | -8.615850e-47 |
| Msa0102900 | Msa1453620 | 0.813942 | 1.982040e-51 | -8.615850e-47 |
| Msa0102900 | Msa1454110 | 0.860384 | 2.144519e-63 | -8.615850e-47 |
| Msa0102900 | Msa1454790 | 0.968901 | 2.432573e-129 | -8.615850e-47 |
| Msa0102900 | Msa1456650 | 0.822669 | 2.093591e-53 | -8.615850e-47 |
| Msa0102900 | Msa1458920 | 0.813019 | 3.163941e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0102900 | MtrunA17_Chr1g0157081 | 92.269 | 789 | 50 | 4 | 1 | 779 | 1 | 788 | 0.0 | 1488 |
| Msa0102900 | MtrunA17_Chr1g0210801 | 24.703 | 421 | 293 | 12 | 119 | 534 | 77 | 478 | 3.05e-23 | 104 |
| Msa0102900 | MtrunA17_Chr1g0210801 | 23.588 | 301 | 218 | 5 | 251 | 549 | 133 | 423 | 3.14e-14 | 76.3 |
| Msa0102900 | MtrunA17_Chr2g0292711 | 24.353 | 464 | 272 | 17 | 130 | 526 | 170 | 621 | 4.06e-17 | 85.9 |
| Msa0102900 | MtrunA17_Chr3g0136851 | 22.636 | 349 | 254 | 6 | 191 | 537 | 280 | 614 | 4.23e-16 | 83.2 |
| Msa0102900 | MtrunA17_Chr3g0143411 | 23.701 | 308 | 213 | 8 | 187 | 489 | 149 | 439 | 1.38e-15 | 80.5 |
| Msa0102900 | MtrunA17_Chr3g0126821 | 26.333 | 300 | 203 | 7 | 214 | 506 | 204 | 492 | 4.87e-15 | 79.0 |
| Msa0102900 | MtrunA17_Chr7g0257471 | 24.062 | 320 | 223 | 8 | 202 | 517 | 439 | 742 | 2.03e-14 | 77.4 |
| Msa0102900 | MtrunA17_Chr2g0285331 | 22.478 | 347 | 240 | 10 | 151 | 487 | 166 | 493 | 2.59e-14 | 77.0 |
| Msa0102900 | MtrunA17_Chr4g0038401 | 22.157 | 343 | 249 | 7 | 203 | 542 | 310 | 637 | 2.75e-14 | 77.0 |
| Msa0102900 | MtrunA17_Chr4g0038401 | 22.090 | 335 | 243 | 9 | 203 | 534 | 450 | 769 | 1.38e-11 | 68.2 |
| Msa0102900 | MtrunA17_Chr4g0038401 | 21.053 | 380 | 243 | 8 | 162 | 537 | 480 | 806 | 8.31e-11 | 65.9 |
| Msa0102900 | MtrunA17_Chr1g0211881 | 27.273 | 198 | 131 | 5 | 172 | 369 | 306 | 490 | 3.95e-14 | 75.9 |
| Msa0102900 | MtrunA17_Chr2g0304071 | 23.529 | 391 | 264 | 13 | 157 | 536 | 484 | 850 | 7.89e-14 | 75.5 |
| Msa0102900 | MtrunA17_Chr6g0482571 | 22.112 | 303 | 215 | 6 | 235 | 522 | 58 | 354 | 2.00e-13 | 73.2 |
| Msa0102900 | MtrunA17_Chr8g0375231 | 25.220 | 341 | 215 | 10 | 190 | 498 | 263 | 595 | 2.09e-13 | 73.9 |
| Msa0102900 | MtrunA17_Chr8g0375231 | 21.245 | 273 | 204 | 5 | 305 | 571 | 226 | 493 | 1.19e-11 | 68.6 |
| Msa0102900 | MtrunA17_Chr3g0091741 | 21.429 | 350 | 220 | 7 | 197 | 498 | 139 | 481 | 2.30e-13 | 73.6 |
| Msa0102900 | MtrunA17_Chr6g0473331 | 23.939 | 330 | 229 | 8 | 210 | 534 | 124 | 436 | 2.51e-13 | 73.6 |
| Msa0102900 | MtrunA17_Chr6g0473351 | 23.636 | 330 | 227 | 8 | 210 | 534 | 86 | 395 | 2.52e-13 | 73.6 |
| Msa0102900 | MtrunA17_Chr1g0147171 | 24.159 | 327 | 231 | 9 | 211 | 534 | 174 | 486 | 2.61e-13 | 73.6 |
| Msa0102900 | MtrunA17_Chr7g0218641 | 22.857 | 350 | 252 | 7 | 235 | 582 | 215 | 548 | 2.95e-13 | 73.2 |
| Msa0102900 | MtrunA17_Chr1g0160881 | 22.086 | 326 | 240 | 7 | 193 | 517 | 289 | 601 | 3.30e-13 | 73.6 |
| Msa0102900 | MtrunA17_Chr8g0369641 | 23.662 | 355 | 246 | 10 | 187 | 534 | 321 | 657 | 3.34e-13 | 73.6 |
| Msa0102900 | MtrunA17_Chr7g0257371 | 22.727 | 418 | 293 | 10 | 136 | 543 | 140 | 537 | 3.41e-13 | 73.6 |
| Msa0102900 | MtrunA17_Chr3g0085871 | 21.975 | 314 | 226 | 7 | 151 | 461 | 123 | 420 | 3.88e-13 | 73.2 |
| Msa0102900 | MtrunA17_Chr6g0473431 | 22.796 | 329 | 231 | 8 | 210 | 534 | 89 | 398 | 5.30e-13 | 72.4 |
| Msa0102900 | MtrunA17_Chr1g0211431 | 25.938 | 320 | 218 | 8 | 195 | 506 | 182 | 490 | 5.45e-13 | 72.4 |
| Msa0102900 | MtrunA17_Chr2g0297991 | 21.016 | 433 | 255 | 14 | 86 | 494 | 98 | 467 | 7.15e-13 | 72.4 |
| Msa0102900 | MtrunA17_Chr6g0482541 | 21.379 | 290 | 215 | 6 | 235 | 522 | 58 | 336 | 7.77e-13 | 71.2 |
| Msa0102900 | MtrunA17_Chr6g0473491 | 23.810 | 294 | 203 | 7 | 210 | 498 | 86 | 363 | 9.57e-13 | 71.6 |
| Msa0102900 | MtrunA17_Chr5g0396041 | 22.222 | 306 | 223 | 5 | 197 | 499 | 280 | 573 | 1.23e-12 | 72.0 |
| Msa0102900 | MtrunA17_Chr6g0478551 | 20.755 | 318 | 222 | 9 | 225 | 532 | 29 | 326 | 1.39e-12 | 70.9 |
| Msa0102900 | MtrunA17_Chr6g0473251 | 20.724 | 304 | 226 | 6 | 235 | 534 | 36 | 328 | 1.87e-12 | 70.5 |
| Msa0102900 | MtrunA17_Chr6g0473251 | 23.630 | 292 | 206 | 7 | 210 | 498 | 86 | 363 | 7.44e-12 | 68.6 |
| Msa0102900 | MtrunA17_Chr1g0182521 | 24.485 | 388 | 259 | 11 | 152 | 534 | 115 | 473 | 2.59e-12 | 70.5 |
| Msa0102900 | MtrunA17_Chr4g0033981 | 23.496 | 349 | 243 | 11 | 115 | 459 | 292 | 620 | 3.04e-12 | 70.1 |
| Msa0102900 | MtrunA17_Chr4g0033981 | 21.299 | 385 | 271 | 8 | 132 | 498 | 223 | 593 | 1.60e-11 | 67.8 |
| Msa0102900 | MtrunA17_Chr5g0395201 | 21.277 | 376 | 266 | 9 | 141 | 498 | 454 | 817 | 3.50e-12 | 70.5 |
| Msa0102900 | MtrunA17_Chr4g0037841 | 23.602 | 322 | 182 | 10 | 187 | 499 | 279 | 545 | 3.71e-12 | 69.7 |
| Msa0102900 | MtrunA17_Chr8g0390501 | 22.084 | 403 | 275 | 11 | 181 | 578 | 123 | 491 | 4.57e-12 | 69.7 |
| Msa0102900 | MtrunA17_Chr1g0148281 | 24.399 | 291 | 174 | 7 | 250 | 537 | 160 | 407 | 6.12e-12 | 68.9 |
| Msa0102900 | MtrunA17_Chr7g0241721 | 22.687 | 335 | 237 | 10 | 214 | 543 | 20 | 337 | 6.73e-12 | 68.9 |
| Msa0102900 | MtrunA17_Chr1g0200211 | 21.466 | 382 | 285 | 8 | 162 | 542 | 228 | 595 | 8.00e-12 | 68.9 |
| Msa0102900 | MtrunA17_Chr8g0391651 | 24.554 | 224 | 161 | 4 | 315 | 534 | 294 | 513 | 9.47e-12 | 68.6 |
| Msa0102900 | MtrunA17_Chr6g0473441 | 23.154 | 298 | 200 | 8 | 210 | 498 | 86 | 363 | 1.02e-11 | 68.2 |
| Msa0102900 | MtrunA17_Chr6g0473481 | 22.789 | 294 | 206 | 7 | 210 | 498 | 86 | 363 | 1.05e-11 | 68.2 |
| Msa0102900 | MtrunA17_Chr6g0473511 | 22.789 | 294 | 206 | 7 | 210 | 498 | 86 | 363 | 1.05e-11 | 68.2 |
| Msa0102900 | MtrunA17_Chr8g0392911 | 21.287 | 404 | 248 | 10 | 203 | 542 | 77 | 474 | 1.09e-11 | 68.6 |
| Msa0102900 | MtrunA17_Chr7g0215561 | 23.667 | 300 | 213 | 8 | 202 | 498 | 296 | 582 | 1.22e-11 | 68.2 |
| Msa0102900 | MtrunA17_Chr6g0473261 | 22.789 | 294 | 206 | 7 | 210 | 498 | 134 | 411 | 1.28e-11 | 68.2 |
| Msa0102900 | MtrunA17_Chr5g0446031 | 23.729 | 354 | 248 | 8 | 152 | 500 | 384 | 720 | 1.30e-11 | 68.6 |
| Msa0102900 | MtrunA17_Chr1g0193151 | 22.963 | 270 | 191 | 7 | 249 | 515 | 158 | 413 | 1.40e-11 | 68.2 |
| Msa0102900 | MtrunA17_Chr6g0478691 | 23.684 | 342 | 237 | 13 | 208 | 543 | 95 | 418 | 2.25e-11 | 67.4 |
| Msa0102900 | MtrunA17_Chr6g0482971 | 24.161 | 298 | 198 | 9 | 210 | 498 | 82 | 360 | 2.26e-11 | 67.0 |
| Msa0102900 | MtrunA17_Chr7g0214351 | 22.742 | 299 | 217 | 6 | 202 | 498 | 297 | 583 | 2.30e-11 | 67.4 |
| Msa0102900 | MtrunA17_Chr4g0048611 | 22.792 | 351 | 241 | 11 | 203 | 543 | 138 | 468 | 3.13e-11 | 67.0 |
| Msa0102900 | MtrunA17_Chr4g0060341 | 23.125 | 320 | 186 | 9 | 187 | 499 | 279 | 545 | 3.30e-11 | 66.6 |
| Msa0102900 | MtrunA17_Chr8g0381361 | 20.513 | 351 | 252 | 9 | 191 | 534 | 125 | 455 | 3.43e-11 | 66.6 |
| Msa0102900 | MtrunA17_Chr6g0482771 | 22.491 | 289 | 214 | 5 | 235 | 522 | 107 | 386 | 3.52e-11 | 66.6 |
| Msa0102900 | MtrunA17_Chr4g0039041 | 21.250 | 320 | 227 | 8 | 187 | 499 | 435 | 736 | 3.67e-11 | 67.0 |
| Msa0102900 | MtrunA17_Chr3g0102961 | 24.545 | 220 | 156 | 5 | 322 | 536 | 128 | 342 | 3.95e-11 | 66.2 |
| Msa0102900 | MtrunA17_Chr6g0472611 | 22.727 | 330 | 233 | 7 | 210 | 534 | 92 | 404 | 4.76e-11 | 66.2 |
| Msa0102900 | MtrunA17_Chr6g0471531 | 23.077 | 325 | 237 | 6 | 235 | 558 | 235 | 547 | 5.00e-11 | 66.2 |
| Msa0102900 | MtrunA17_Chr7g0246931 | 23.948 | 309 | 225 | 6 | 232 | 539 | 223 | 522 | 5.49e-11 | 65.9 |
| Msa0102900 | MtrunA17_Chr6g0482751 | 22.018 | 327 | 241 | 6 | 210 | 535 | 91 | 404 | 6.47e-11 | 65.9 |
| Msa0102900 | MtrunA17_Chr4g0052491 | 20.391 | 358 | 265 | 7 | 147 | 498 | 145 | 488 | 7.19e-11 | 65.9 |
| Msa0102900 | MtrunA17_Chr1g0168761 | 23.292 | 322 | 225 | 9 | 218 | 534 | 86 | 390 | 7.20e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0102900 | AT2G15820.1 | 53.741 | 802 | 330 | 8 | 14 | 778 | 39 | 836 | 0.0 | 858 |
| Msa0102900 | AT2G35130.3 | 21.585 | 366 | 274 | 6 | 167 | 531 | 141 | 494 | 5.49e-16 | 82.4 |
| Msa0102900 | AT2G31400.1 | 23.118 | 372 | 272 | 8 | 135 | 504 | 186 | 545 | 8.10e-16 | 82.4 |
| Msa0102900 | AT2G31400.2 | 23.118 | 372 | 272 | 8 | 135 | 504 | 186 | 545 | 9.25e-16 | 82.4 |
| Msa0102900 | AT2G35130.2 | 21.409 | 369 | 274 | 7 | 167 | 531 | 163 | 519 | 9.70e-15 | 78.6 |
| Msa0102900 | AT5G61990.1 | 23.262 | 374 | 265 | 9 | 185 | 549 | 596 | 956 | 9.87e-15 | 79.0 |
| Msa0102900 | AT2G35130.1 | 21.409 | 369 | 274 | 7 | 167 | 531 | 141 | 497 | 1.32e-14 | 78.2 |
| Msa0102900 | AT1G09680.1 | 23.906 | 297 | 212 | 6 | 149 | 445 | 280 | 562 | 1.78e-14 | 77.8 |
| Msa0102900 | AT1G09680.1 | 21.765 | 340 | 242 | 9 | 193 | 526 | 252 | 573 | 7.27e-13 | 72.4 |
| Msa0102900 | AT1G09680.1 | 20.672 | 387 | 263 | 7 | 163 | 542 | 100 | 449 | 1.10e-11 | 68.9 |
| Msa0102900 | AT1G63400.1 | 22.581 | 372 | 259 | 11 | 172 | 536 | 181 | 530 | 4.24e-14 | 76.3 |
| Msa0102900 | AT5G64320.1 | 22.857 | 315 | 224 | 8 | 210 | 522 | 316 | 613 | 4.26e-14 | 76.6 |
| Msa0102900 | AT5G04810.1 | 21.448 | 359 | 263 | 8 | 178 | 534 | 309 | 650 | 1.24e-13 | 75.5 |
| Msa0102900 | AT5G04810.2 | 21.448 | 359 | 263 | 8 | 178 | 534 | 309 | 650 | 1.48e-13 | 75.1 |
| Msa0102900 | AT5G01110.1 | 22.302 | 417 | 299 | 11 | 117 | 527 | 242 | 639 | 1.51e-13 | 75.1 |
| Msa0102900 | AT5G01110.2 | 22.302 | 417 | 299 | 11 | 117 | 527 | 270 | 667 | 1.82e-13 | 74.7 |
| Msa0102900 | AT4G20090.2 | 22.156 | 334 | 243 | 7 | 187 | 516 | 263 | 583 | 2.98e-13 | 73.9 |
| Msa0102900 | AT4G20090.1 | 22.156 | 334 | 243 | 7 | 187 | 516 | 263 | 583 | 2.98e-13 | 73.9 |
| Msa0102900 | AT1G63130.1 | 23.460 | 341 | 232 | 11 | 203 | 536 | 208 | 526 | 3.14e-13 | 73.9 |
| Msa0102900 | AT1G63130.2 | 23.460 | 341 | 232 | 11 | 203 | 536 | 208 | 526 | 3.14e-13 | 73.9 |
| Msa0102900 | AT3G16710.1 | 22.006 | 309 | 215 | 9 | 235 | 536 | 169 | 458 | 4.52e-13 | 72.8 |
| Msa0102900 | AT5G55840.2 | 23.256 | 430 | 293 | 15 | 119 | 536 | 277 | 681 | 5.46e-13 | 73.6 |
| Msa0102900 | AT5G55840.1 | 23.256 | 430 | 293 | 15 | 119 | 536 | 277 | 681 | 5.46e-13 | 73.6 |
| Msa0102900 | AT5G55840.3 | 23.256 | 430 | 293 | 15 | 119 | 536 | 237 | 641 | 5.49e-13 | 73.6 |
| Msa0102900 | AT3G48810.1 | 26.493 | 268 | 169 | 10 | 278 | 534 | 128 | 378 | 5.73e-13 | 73.2 |
| Msa0102900 | AT3G54980.1 | 22.667 | 375 | 255 | 11 | 167 | 537 | 270 | 613 | 7.14e-13 | 72.8 |
| Msa0102900 | AT3G54980.2 | 22.667 | 375 | 255 | 11 | 167 | 537 | 270 | 613 | 7.14e-13 | 72.8 |
| Msa0102900 | AT1G20300.1 | 22.753 | 356 | 254 | 9 | 187 | 538 | 157 | 495 | 9.85e-13 | 72.0 |
| Msa0102900 | AT1G31840.1 | 22.741 | 321 | 229 | 8 | 235 | 550 | 512 | 818 | 1.14e-12 | 72.4 |
| Msa0102900 | AT3G16010.1 | 20.270 | 444 | 303 | 11 | 138 | 542 | 117 | 548 | 1.26e-12 | 72.0 |
| Msa0102900 | AT2G17140.1 | 22.841 | 359 | 253 | 9 | 193 | 543 | 124 | 466 | 1.66e-12 | 71.6 |
| Msa0102900 | AT2G17140.1 | 22.255 | 337 | 248 | 7 | 201 | 534 | 167 | 492 | 3.94e-12 | 70.5 |
| Msa0102900 | AT2G17140.2 | 22.841 | 359 | 253 | 9 | 193 | 543 | 124 | 466 | 1.66e-12 | 71.6 |
| Msa0102900 | AT2G17140.2 | 22.255 | 337 | 248 | 7 | 201 | 534 | 167 | 492 | 3.94e-12 | 70.5 |
| Msa0102900 | AT1G09900.1 | 21.875 | 352 | 241 | 8 | 191 | 534 | 150 | 475 | 1.67e-12 | 71.2 |
| Msa0102900 | AT3G18110.1 | 23.301 | 309 | 225 | 5 | 196 | 502 | 240 | 538 | 1.95e-12 | 71.6 |
| Msa0102900 | AT5G02860.1 | 24.695 | 328 | 193 | 9 | 203 | 491 | 476 | 788 | 2.34e-12 | 71.2 |
| Msa0102900 | AT5G02860.4 | 24.695 | 328 | 193 | 9 | 203 | 491 | 476 | 788 | 2.34e-12 | 71.2 |
| Msa0102900 | AT5G02860.2 | 24.695 | 328 | 193 | 9 | 203 | 491 | 476 | 788 | 2.34e-12 | 71.2 |
| Msa0102900 | AT5G02860.5 | 24.695 | 328 | 193 | 9 | 203 | 491 | 476 | 788 | 2.34e-12 | 71.2 |
| Msa0102900 | AT5G02860.3 | 24.695 | 328 | 193 | 9 | 203 | 491 | 476 | 788 | 2.34e-12 | 71.2 |
| Msa0102900 | AT1G62590.2 | 22.581 | 372 | 259 | 11 | 172 | 536 | 181 | 530 | 6.31e-12 | 69.7 |
| Msa0102900 | AT1G62590.1 | 22.581 | 372 | 259 | 11 | 172 | 536 | 181 | 530 | 6.31e-12 | 69.7 |
| Msa0102900 | AT1G13040.2 | 22.414 | 348 | 255 | 8 | 189 | 534 | 122 | 456 | 8.07e-12 | 68.9 |
| Msa0102900 | AT1G13040.1 | 22.414 | 348 | 255 | 8 | 189 | 534 | 122 | 456 | 8.07e-12 | 68.9 |
| Msa0102900 | AT1G12775.1 | 21.587 | 315 | 228 | 6 | 233 | 542 | 277 | 577 | 8.94e-12 | 69.3 |
| Msa0102900 | AT2G39230.1 | 20.824 | 437 | 295 | 10 | 117 | 534 | 387 | 791 | 1.08e-11 | 68.9 |
| Msa0102900 | AT2G39230.1 | 20.403 | 397 | 291 | 11 | 148 | 537 | 241 | 619 | 5.67e-11 | 66.6 |
| Msa0102900 | AT1G06710.7 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.1 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.9 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.4 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.13 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.3 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.8 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.2 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.19 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.5 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.6 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G06710.12 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.21e-11 | 68.9 |
| Msa0102900 | AT1G66345.1 | 20.207 | 386 | 292 | 8 | 151 | 534 | 169 | 540 | 1.24e-11 | 68.6 |
| Msa0102900 | AT5G41170.2 | 21.726 | 336 | 244 | 8 | 211 | 542 | 137 | 457 | 1.36e-11 | 68.2 |
| Msa0102900 | AT1G06710.15 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.41e-11 | 68.9 |
| Msa0102900 | AT1G06710.18 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.41e-11 | 68.9 |
| Msa0102900 | AT1G06710.17 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.41e-11 | 68.9 |
| Msa0102900 | AT1G06710.14 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.41e-11 | 68.9 |
| Msa0102900 | AT1G06710.16 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.41e-11 | 68.9 |
| Msa0102900 | AT1G06710.10 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.41e-11 | 68.9 |
| Msa0102900 | AT1G06710.11 | 22.287 | 341 | 233 | 10 | 196 | 518 | 463 | 789 | 1.41e-11 | 68.9 |
| Msa0102900 | AT5G41170.1 | 21.726 | 336 | 244 | 8 | 211 | 542 | 137 | 457 | 1.48e-11 | 68.2 |
| Msa0102900 | AT3G61520.1 | 19.718 | 426 | 319 | 7 | 111 | 527 | 260 | 671 | 1.51e-11 | 68.6 |
| Msa0102900 | AT1G63330.3 | 22.312 | 372 | 260 | 11 | 172 | 536 | 106 | 455 | 1.57e-11 | 68.2 |
| Msa0102900 | AT1G63330.1 | 22.312 | 372 | 260 | 11 | 172 | 536 | 106 | 455 | 1.57e-11 | 68.2 |
| Msa0102900 | AT1G63330.2 | 22.312 | 372 | 260 | 11 | 172 | 536 | 106 | 455 | 1.57e-11 | 68.2 |
| Msa0102900 | AT1G12620.1 | 20.130 | 308 | 227 | 6 | 232 | 534 | 260 | 553 | 1.67e-11 | 68.2 |
| Msa0102900 | AT5G41170.3 | 21.726 | 336 | 244 | 8 | 211 | 542 | 37 | 357 | 1.70e-11 | 67.8 |
| Msa0102900 | AT2G15630.1 | 21.287 | 404 | 285 | 9 | 120 | 514 | 235 | 614 | 1.84e-11 | 68.2 |
| Msa0102900 | AT5G28370.1 | 21.212 | 231 | 175 | 2 | 298 | 527 | 447 | 671 | 2.07e-11 | 68.2 |
| Msa0102900 | AT5G28460.1 | 19.718 | 426 | 319 | 7 | 111 | 527 | 260 | 671 | 2.34e-11 | 67.8 |
| Msa0102900 | AT3G16710.2 | 20.833 | 288 | 209 | 6 | 235 | 517 | 169 | 442 | 2.51e-11 | 67.0 |
| Msa0102900 | AT4G39620.2 | 22.581 | 279 | 205 | 6 | 259 | 531 | 133 | 406 | 2.64e-11 | 67.4 |
| Msa0102900 | AT4G19440.4 | 21.569 | 459 | 339 | 9 | 77 | 532 | 382 | 822 | 2.68e-11 | 67.8 |
| Msa0102900 | AT4G19440.2 | 21.569 | 459 | 339 | 9 | 77 | 532 | 382 | 822 | 2.68e-11 | 67.8 |
| Msa0102900 | AT4G19440.3 | 21.569 | 459 | 339 | 9 | 77 | 532 | 382 | 822 | 2.68e-11 | 67.8 |
| Msa0102900 | AT4G19440.1 | 21.569 | 459 | 339 | 9 | 77 | 532 | 382 | 822 | 2.68e-11 | 67.8 |
| Msa0102900 | AT3G53700.1 | 21.471 | 340 | 240 | 7 | 203 | 534 | 211 | 531 | 2.95e-11 | 67.8 |
| Msa0102900 | AT3G53700.1 | 19.023 | 389 | 293 | 8 | 160 | 542 | 62 | 434 | 9.48e-11 | 65.9 |
| Msa0102900 | AT4G39620.1 | 22.581 | 279 | 205 | 6 | 259 | 531 | 133 | 406 | 4.16e-11 | 67.0 |
| Msa0102900 | AT3G22470.2 | 22.292 | 480 | 320 | 17 | 73 | 536 | 48 | 490 | 4.87e-11 | 66.6 |
| Msa0102900 | AT1G09820.1 | 22.222 | 378 | 260 | 11 | 158 | 522 | 199 | 555 | 5.40e-11 | 66.6 |
| Msa0102900 | AT1G62720.1 | 22.591 | 301 | 210 | 9 | 237 | 533 | 157 | 438 | 5.78e-11 | 66.2 |
| Msa0102900 | AT1G62670.2 | 20.789 | 380 | 242 | 13 | 196 | 534 | 201 | 562 | 6.55e-11 | 66.2 |
| Msa0102900 | AT1G62670.1 | 20.789 | 380 | 242 | 13 | 196 | 534 | 201 | 562 | 6.55e-11 | 66.2 |
| Msa0102900 | AT4G30825.1 | 23.404 | 235 | 169 | 4 | 293 | 522 | 624 | 852 | 9.90e-11 | 65.9 |
Find 219 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAGAGGTTAGGGTTTA+AGG | 0.082041 | 1_3:+9804740 | None:intergenic |
| CATCAATTTCATACTTATTT+TGG | 0.134963 | 1_3:+9802461 | None:intergenic |
| GGTATTCTGGATTGGTATTC+TGG | 0.195897 | 1_3:-9801894 | Msa0102900:CDS |
| ATATTTATGGTGGCCTAATT+TGG | 0.196709 | 1_3:-9803176 | Msa0102900:CDS |
| TACAACTTGGTTCTGGAAAT+TGG | 0.196797 | 1_3:-9801864 | Msa0102900:CDS |
| ACCATTGCAAGCTCTCATTT+TGG | 0.235787 | 1_3:-9802142 | Msa0102900:CDS |
| TGAAATTGATGCCCCATTAA+TGG | 0.248077 | 1_3:-9802449 | Msa0102900:CDS |
| TTCTATTCTTTCTTTGTCTA+TGG | 0.251309 | 1_3:+9803134 | None:intergenic |
| TATGGAATCACATGATAAAT+TGG | 0.256096 | 1_3:-9802716 | Msa0102900:CDS |
| CAAAATTGAAATGGATAATA+TGG | 0.269995 | 1_3:+9802284 | None:intergenic |
| CATGATTGATTCTGCAAATT+CGG | 0.273446 | 1_3:+9802810 | None:intergenic |
| ACTAAACATGTACTTCAATA+TGG | 0.284965 | 1_3:-9802734 | Msa0102900:CDS |
| CACCTTGTGTTCTTGCATAC+TGG | 0.289141 | 1_3:-9802051 | Msa0102900:CDS |
| GATAGCTATGCAGCCAAATT+AGG | 0.290210 | 1_3:+9803163 | None:intergenic |
| TAGTATATATTTAGATTCTT+TGG | 0.296485 | 1_3:-9802641 | Msa0102900:CDS |
| GAAAGCGGCGGAGGTGGAGG+AGG | 0.302585 | 1_3:+9804646 | None:intergenic |
| GCTTTCAAACTGCAAAAGTT+TGG | 0.303946 | 1_3:+9802996 | None:intergenic |
| TTCTTCTGTTCAAGGTTGTT+TGG | 0.305268 | 1_3:-9803382 | Msa0102900:CDS |
| AACCACCTATGAACAAGTTT+TGG | 0.306684 | 1_3:+9802076 | None:intergenic |
| CTTACATCTTCAAGAATATA+TGG | 0.308293 | 1_3:+9801836 | None:intergenic |
| ATACTATATATAACACTATT+AGG | 0.314376 | 1_3:+9802658 | None:intergenic |
| AAGGGAGGGTGCGAGGTAGG+TGG | 0.317009 | 1_3:+9804670 | None:intergenic |
| AATTTGGCTGCATAGCTATC+AGG | 0.319175 | 1_3:-9803160 | Msa0102900:CDS |
| TACCTTAGTTCTTCTGTTCA+AGG | 0.335736 | 1_3:-9803390 | Msa0102900:CDS |
| TCCCTTGACTTTACAATCAA+TGG | 0.337999 | 1_3:+9801925 | None:intergenic |
| TCTGTTCTTTATTTAACTTC+AGG | 0.342578 | 1_3:+9802371 | None:intergenic |
| GCGAGAACGAAACCGCGTTT+AGG | 0.343042 | 1_3:-9804320 | Msa0102900:CDS |
| AGGGAAAGGGAAAGGTATTC+TGG | 0.343457 | 1_3:-9801907 | Msa0102900:CDS |
| CAGAGTTGCTTGGCTTTGTA+AGG | 0.349174 | 1_3:-9804451 | Msa0102900:CDS |
| ATATTCAGGAAATCACTTAA+AGG | 0.349756 | 1_3:-9802509 | Msa0102900:CDS |
| GGTAAGCCACAATCAATATA+TGG | 0.352346 | 1_3:+9803409 | None:intergenic |
| AGGAGGGAAGGGAGGGTGCG+AGG | 0.357265 | 1_3:+9804663 | None:intergenic |
| GGGAAGGGAGGGTGCGAGGT+AGG | 0.358497 | 1_3:+9804667 | None:intergenic |
| TTAAGTGATTTCCTGAATAT+AGG | 0.360058 | 1_3:+9802512 | None:intergenic |
| GCAATGGTGCAAAACTTATC+TGG | 0.373004 | 1_3:+9802157 | None:intergenic |
| CAATTCCAAAACTTGTTCAT+AGG | 0.373747 | 1_3:-9802081 | Msa0102900:CDS |
| ATAAGGCGGGGACTTTGATT+AGG | 0.373927 | 1_3:-9804416 | Msa0102900:CDS |
| GGGGAAAGCGGCGGAGGTGG+AGG | 0.383548 | 1_3:+9804643 | None:intergenic |
| TTATTTAACTTCAGGCTCAT+TGG | 0.384361 | 1_3:+9802379 | None:intergenic |
| CTGCGCAAGGGAGGGTGAGG+TGG | 0.385546 | 1_3:-9803040 | Msa0102900:CDS |
| GGAATTGTAGGTTGACCATT+TGG | 0.387144 | 1_3:+9802097 | None:intergenic |
| TTGGCTTTGTAAGGAGTTAC+CGG | 0.390410 | 1_3:-9804442 | Msa0102900:CDS |
| TTACATGGATACCTATATTC+AGG | 0.393280 | 1_3:-9802523 | Msa0102900:CDS |
| CGAGAACGAAACCGCGTTTA+GGG | 0.394042 | 1_3:-9804319 | Msa0102900:intron |
| TTAGATTCTTTGGTGAAAGT+TGG | 0.397946 | 1_3:-9802631 | Msa0102900:CDS |
| GAAGCAATACAACTTGGTTC+TGG | 0.398600 | 1_3:-9801871 | Msa0102900:CDS |
| AATAAACATATGATGGTGTA+AGG | 0.401918 | 1_3:+9802758 | None:intergenic |
| ATTCCACCGAATGATTCAAT+TGG | 0.404834 | 1_3:-9803343 | Msa0102900:CDS |
| ACCATTTGGCCAAAACTGAT+TGG | 0.407953 | 1_3:+9802111 | None:intergenic |
| TGAGGGGAAAGCGGCGGAGG+TGG | 0.408758 | 1_3:+9804640 | None:intergenic |
| GAACGCATTGAAGAGAGGTT+AGG | 0.409774 | 1_3:+9804732 | None:intergenic |
| TAAGGAGTTACCGGCGCATA+AGG | 0.411126 | 1_3:-9804433 | Msa0102900:CDS |
| TGAGTTTATATATCATCGTT+TGG | 0.412181 | 1_3:-9803226 | Msa0102900:CDS |
| CGGCGGAGGTGGAGGAGGGA+AGG | 0.412326 | 1_3:+9804651 | None:intergenic |
| AATTGCCATCAAAATTGAAA+TGG | 0.413559 | 1_3:+9802275 | None:intergenic |
| TGTTGTCAGGAAGGTCTTGA+TGG | 0.413959 | 1_3:+9804586 | None:intergenic |
| GAACAGAGAGAAATACTGAT+TGG | 0.415232 | 1_3:-9802355 | Msa0102900:CDS |
| CAAAATGGAAGTCCACTCTA+AGG | 0.416614 | 1_3:-9802947 | Msa0102900:CDS |
| ATATAAACTCAGCTTGCTTA+AGG | 0.416737 | 1_3:+9803238 | None:intergenic |
| AATATCTCCAAGGACTTCAT+AGG | 0.423483 | 1_3:+9802916 | None:intergenic |
| AAACAAGCGGCTGCCGCGTC+CGG | 0.426245 | 1_3:-9804523 | Msa0102900:CDS |
| GGAGGTGGAGGAGGGAAGGG+AGG | 0.427269 | 1_3:+9804655 | None:intergenic |
| CGCAAGGGAGGGTGAGGTGG+AGG | 0.427987 | 1_3:-9803037 | Msa0102900:CDS |
| GTTATGACTGAAGTTGAAAC+AGG | 0.434447 | 1_3:+9804768 | None:intergenic |
| CTTACAAAGCCAAGCAACTC+TGG | 0.435872 | 1_3:+9804452 | None:intergenic |
| CGCTTTCCCCTCAACTGCGT+TGG | 0.436892 | 1_3:-9804630 | Msa0102900:CDS |
| TAAGGGAAGTCGTGAGGGTG+TGG | 0.438002 | 1_3:-9801978 | Msa0102900:CDS |
| CCGTTTCGCAGGGGTGGAGG+AGG | 0.438291 | 1_3:-9804553 | Msa0102900:CDS |
| TTTGATGATATTATCAATCA+AGG | 0.443335 | 1_3:-9803456 | Msa0102900:CDS |
| TATATGGAACGTGGACTCGC+TGG | 0.444107 | 1_3:+9803425 | None:intergenic |
| TATCATCGTTTGGTTACAAA+TGG | 0.445733 | 1_3:-9803216 | Msa0102900:CDS |
| CACCTCACCCTCCCTTGCGC+AGG | 0.446373 | 1_3:+9803041 | None:intergenic |
| GTATTCTGGATTGGTATTCT+GGG | 0.446524 | 1_3:-9801893 | Msa0102900:CDS |
| TAAGATGATGTTACATGATC+GGG | 0.446858 | 1_3:+9802543 | None:intergenic |
| GGTGCGAGGTAGGTGGAGAG+TGG | 0.452022 | 1_3:+9804677 | None:intergenic |
| GGCCTGCGCAAGGGAGGGTG+AGG | 0.455036 | 1_3:-9803043 | Msa0102900:CDS |
| TTCTGAATGGGCAGAGGAAG+TGG | 0.455423 | 1_3:-9804392 | Msa0102900:CDS |
| GATGTAGCCACTCATAAAAC+TGG | 0.455806 | 1_3:+9802215 | None:intergenic |
| CTTGAGGGCCTGCGCAAGGG+AGG | 0.458248 | 1_3:-9803049 | Msa0102900:CDS |
| GGCGGAGGTGGAGGAGGGAA+GGG | 0.460362 | 1_3:+9804652 | None:intergenic |
| TGGAGGAAGCAGAGAAAACT+TGG | 0.461017 | 1_3:-9803020 | Msa0102900:CDS |
| GCTTAGTAGTATGCCGGACT+AGG | 0.464778 | 1_3:-9801673 | Msa0102900:three_prime_UTR |
| CCTGCTTAAAGGTATACAAA+TGG | 0.464867 | 1_3:-9803578 | Msa0102900:intron |
| AACGCATTGAAGAGAGGTTA+GGG | 0.465533 | 1_3:+9804733 | None:intergenic |
| GATGTGCATAAAGATATTTA+TGG | 0.465782 | 1_3:-9803189 | Msa0102900:CDS |
| TACTTGCATCACGAAACATT+TGG | 0.467025 | 1_3:+9802578 | None:intergenic |
| CGGAAAATATCGTTGTTGTC+AGG | 0.473397 | 1_3:+9804573 | None:intergenic |
| TGAGTGAGGTGCCGGAGCTA+TGG | 0.474011 | 1_3:-9804482 | Msa0102900:CDS |
| AAGTTGAAACTAGGTAAGAT+AGG | 0.481244 | 1_3:-9802883 | Msa0102900:CDS |
| AGTTGAGGGGAAAGCGGCGG+AGG | 0.482626 | 1_3:+9804637 | None:intergenic |
| TTTCCGTTTCGCAGGGGTGG+AGG | 0.485521 | 1_3:-9804556 | Msa0102900:CDS |
| AGGTAGGTGGAGAGTGGAGA+GGG | 0.485808 | 1_3:+9804683 | None:intergenic |
| GGAGGGCATCGAAATTCATC+GGG | 0.486854 | 1_3:-9802019 | Msa0102900:CDS |
| TGTACACAAAAGCCTGTGAT+GGG | 0.487794 | 1_3:+9802968 | None:intergenic |
| GAGTTACCGGCGCATAAGGC+GGG | 0.488242 | 1_3:-9804429 | Msa0102900:CDS |
| GGCGGAGGTCCAGAGTTGCT+TGG | 0.489260 | 1_3:-9804461 | Msa0102900:CDS |
| AACAGAGAGAAATACTGATT+GGG | 0.489307 | 1_3:-9802354 | Msa0102900:CDS |
| ATCCACCCAATTGAATCATT+CGG | 0.490712 | 1_3:+9803337 | None:intergenic |
| GTTGGTAAAATTGACAAGGC+TGG | 0.491220 | 1_3:-9802613 | Msa0102900:CDS |
| CCTCCTCCACCCCTGCGAAA+CGG | 0.494210 | 1_3:+9804553 | None:intergenic |
| CTGATTGGGATGCTTCTAGC+TGG | 0.494346 | 1_3:-9802340 | Msa0102900:CDS |
| CGACGTTGCCAACGCAGTTG+AGG | 0.494450 | 1_3:+9804622 | None:intergenic |
| TTCCACCGAATGATTCAATT+GGG | 0.494453 | 1_3:-9803342 | Msa0102900:CDS |
| TGTAAAAGCATAACCTAGTC+CGG | 0.496618 | 1_3:+9801660 | None:intergenic |
| TACTGCTTTGAAAAGTTCCC+TGG | 0.496818 | 1_3:+9803261 | None:intergenic |
| AACTCCTTCACATCAACCTC+CGG | 0.497765 | 1_3:+9804504 | None:intergenic |
| TTTAGTAAATAAACATATGA+TGG | 0.501648 | 1_3:+9802751 | None:intergenic |
| GTCCATTGATTGTAAAGTCA+AGG | 0.503337 | 1_3:-9801927 | Msa0102900:CDS |
| TACTAGGCTAGCAGATTACA+TGG | 0.508890 | 1_3:-9803514 | Msa0102900:CDS |
| GACGTTGCCAACGCAGTTGA+GGG | 0.508945 | 1_3:+9804623 | None:intergenic |
| CGATCTTGAGGGCCTGCGCA+AGG | 0.509240 | 1_3:-9803053 | Msa0102900:CDS |
| ACTTTGATTAGGATTCTGAA+TGG | 0.510245 | 1_3:-9804405 | Msa0102900:CDS |
| AGATCGATACTAGCACCTCT+TGG | 0.514257 | 1_3:+9803070 | None:intergenic |
| CTTGCATACTGGTACATGTA+TGG | 0.514271 | 1_3:-9802040 | Msa0102900:CDS |
| AACCTTGAACAGAAGAACTA+AGG | 0.520036 | 1_3:+9803388 | None:intergenic |
| GATTGTAAAGTCAAGGGAAA+GGG | 0.520477 | 1_3:-9801920 | Msa0102900:CDS |
| CACGTTCCATATATTGATTG+TGG | 0.521967 | 1_3:-9803415 | Msa0102900:CDS |
| TTGTACACAAAAGCCTGTGA+TGG | 0.523890 | 1_3:+9802967 | None:intergenic |
| AGGTGTGAATATAATGAGAC+AGG | 0.525973 | 1_3:-9801798 | Msa0102900:CDS |
| AAAGCGGCGGAGGTGGAGGA+GGG | 0.527007 | 1_3:+9804647 | None:intergenic |
| TGATGCAACGGAGTTGGTAT+CGG | 0.527693 | 1_3:-9803554 | Msa0102900:CDS |
| GATCTTGAGGGCCTGCGCAA+GGG | 0.528756 | 1_3:-9803052 | Msa0102900:CDS |
| GTAAGATGATGTTACATGAT+CGG | 0.529110 | 1_3:+9802542 | None:intergenic |
| GAGTGGAGAGGGTAAGATTG+CGG | 0.530705 | 1_3:+9804694 | None:intergenic |
| ACTGCAATGATGATCATAGT+TGG | 0.532948 | 1_3:-9801712 | Msa0102900:three_prime_UTR |
| ATGTTCTCACTGTCACCACT+TGG | 0.533528 | 1_3:+9802181 | None:intergenic |
| TCATGTAACATCATCTTACA+TGG | 0.535360 | 1_3:-9802538 | Msa0102900:CDS |
| GCAGAGGAAGTGGTTGAGGC+AGG | 0.535779 | 1_3:-9804382 | Msa0102900:CDS |
| TGGAGGGCATCGAAATTCAT+CGG | 0.541168 | 1_3:-9802020 | Msa0102900:CDS |
| AAATATCTTTATGCACATCA+AGG | 0.541678 | 1_3:+9803193 | None:intergenic |
| AAGGGAAAGGTATTCTGGAT+TGG | 0.541846 | 1_3:-9801902 | Msa0102900:CDS |
| GTAAGAGATTTCACTAAGGC+AGG | 0.542553 | 1_3:-9801818 | Msa0102900:CDS |
| TGGTATGCCTATGAAGTCCT+TGG | 0.542710 | 1_3:-9802923 | Msa0102900:CDS |
| CGCTTATAAGAGCTTTGAAG+AGG | 0.543004 | 1_3:+9803286 | None:intergenic |
| ATGGGCAGAGGAAGTGGTTG+AGG | 0.545504 | 1_3:-9804386 | Msa0102900:CDS |
| TCACCACTTGGCTTAGAAGT+AGG | 0.546193 | 1_3:+9802193 | None:intergenic |
| AGAGAAATGAAGTTGAAACT+AGG | 0.546888 | 1_3:-9802892 | Msa0102900:CDS |
| GCGTCCGGAGGTTGATGTGA+AGG | 0.547281 | 1_3:-9804508 | Msa0102900:CDS |
| AGGTGCTAGTATCGATCTTG+AGG | 0.547318 | 1_3:-9803065 | Msa0102900:CDS |
| CTGGACCTCCGCCATAGCTC+CGG | 0.547816 | 1_3:+9804471 | None:intergenic |
| AATGGATGATGCAACGGAGT+TGG | 0.551069 | 1_3:-9803560 | Msa0102900:CDS |
| GACTTTACAATCAATGGACA+TGG | 0.551655 | 1_3:+9801931 | None:intergenic |
| AGTGATCAAAATATTCAAGA+AGG | 0.552152 | 1_3:+9801547 | None:intergenic |
| ATCACATGATAAATTGGAAG+AGG | 0.554760 | 1_3:-9802710 | Msa0102900:CDS |
| GGTGCTAGTATCGATCTTGA+GGG | 0.554891 | 1_3:-9803064 | Msa0102900:CDS |
| ATATGGAACGTGGACTCGCT+GGG | 0.555396 | 1_3:+9803426 | None:intergenic |
| CACCGAATGATTCAATTGGG+TGG | 0.555489 | 1_3:-9803339 | Msa0102900:CDS |
| TTCTGGGAAGCAATACAACT+TGG | 0.555919 | 1_3:-9801877 | Msa0102900:CDS |
| TTCCAAAACTTGTTCATAGG+TGG | 0.558137 | 1_3:-9802078 | Msa0102900:CDS |
| TCCATTGATTGTAAAGTCAA+GGG | 0.563781 | 1_3:-9801926 | Msa0102900:CDS |
| TAAACATATGATGGTGTAAG+GGG | 0.566401 | 1_3:+9802760 | None:intergenic |
| CTTTGATTAGGATTCTGAAT+GGG | 0.569163 | 1_3:-9804404 | Msa0102900:CDS |
| GAGGTGGAGGAGGGAAGGGA+GGG | 0.570271 | 1_3:+9804656 | None:intergenic |
| TACACAAAAGCCTGTGATGG+GGG | 0.572867 | 1_3:+9802970 | None:intergenic |
| TAAAGTCAAGGGAAAGGGAA+AGG | 0.573314 | 1_3:-9801915 | Msa0102900:CDS |
| ATGGAAGTCCACTCTAAGGT+TGG | 0.573408 | 1_3:-9802943 | Msa0102900:CDS |
| ACGTGGACTCGCTGGGAACA+CGG | 0.577330 | 1_3:+9803433 | None:intergenic |
| CAAGCGGCTGCCGCGTCCGG+AGG | 0.577693 | 1_3:-9804520 | Msa0102900:CDS |
| GTGAGGTGCCGGAGCTATGG+CGG | 0.580371 | 1_3:-9804479 | Msa0102900:CDS |
| ATAAACATATGATGGTGTAA+GGG | 0.580524 | 1_3:+9802759 | None:intergenic |
| ATATCATTATGCATTGCTTG+CGG | 0.581518 | 1_3:-9804347 | Msa0102900:CDS |
| AAAGTCCCCGCCTTATGCGC+CGG | 0.582323 | 1_3:+9804423 | None:intergenic |
| TTGAGGGCCTGCGCAAGGGA+GGG | 0.586695 | 1_3:-9803048 | Msa0102900:CDS |
| AAAGCTCTTATAAGCGAACC+AGG | 0.587841 | 1_3:-9803279 | Msa0102900:CDS |
| GCCAAAATGAGAGCTTGCAA+TGG | 0.588265 | 1_3:+9802141 | None:intergenic |
| ATGTTTCGTGATGCAAGTAT+TGG | 0.589456 | 1_3:-9802574 | Msa0102900:CDS |
| AGTTACCGGCGCATAAGGCG+GGG | 0.590910 | 1_3:-9804428 | Msa0102900:CDS |
| TATATATAACACTATTAGGA+TGG | 0.591675 | 1_3:+9802662 | None:intergenic |
| TGATTGTAAAGTCAAGGGAA+AGG | 0.594051 | 1_3:-9801921 | Msa0102900:CDS |
| TTCACATCAACCTCCGGACG+CGG | 0.594497 | 1_3:+9804510 | None:intergenic |
| TTAGGATTCTGAATGGGCAG+AGG | 0.597519 | 1_3:-9804398 | Msa0102900:CDS |
| AGGTGCCGGAGCTATGGCGG+AGG | 0.598308 | 1_3:-9804476 | Msa0102900:CDS |
| TATGCAAGCTAAGACGCGGC+TGG | 0.601478 | 1_3:+9803313 | None:intergenic |
| GAGGTAGGTGGAGAGTGGAG+AGG | 0.602979 | 1_3:+9804682 | None:intergenic |
| GCATACTGGTACATGTATGG+AGG | 0.605806 | 1_3:-9802037 | Msa0102900:CDS |
| GAAGGAGTTGAGTGAGGTGC+CGG | 0.609700 | 1_3:-9804490 | Msa0102900:CDS |
| AAGAAAGAATAGAAGCATTG+AGG | 0.611980 | 1_3:-9803125 | Msa0102900:CDS |
| CATTTCTCTAAATATCTCCA+AGG | 0.612521 | 1_3:+9802906 | None:intergenic |
| GTTGAAACAGGAAGAAGAAG+TGG | 0.613773 | 1_3:+9804780 | None:intergenic |
| AAGATTAAGGGAAGTCGTGA+GGG | 0.613821 | 1_3:-9801983 | Msa0102900:CDS |
| TTGGGCTTAAGTAACTTCCA+CGG | 0.614679 | 1_3:-9801585 | Msa0102900:three_prime_UTR |
| GGAGTTACCGGCGCATAAGG+CGG | 0.615516 | 1_3:-9804430 | Msa0102900:CDS |
| AAATATCGTTGTTGTCAGGA+AGG | 0.616522 | 1_3:+9804577 | None:intergenic |
| CAACGCAGTTGAGGGGAAAG+CGG | 0.616959 | 1_3:+9804631 | None:intergenic |
| AATACATCCAGAGTTTGAGA+AGG | 0.618189 | 1_3:-9802417 | Msa0102900:CDS |
| TATACAAATGGATGATGCAA+CGG | 0.619265 | 1_3:-9803566 | Msa0102900:CDS |
| GTACACAAAAGCCTGTGATG+GGG | 0.621853 | 1_3:+9802969 | None:intergenic |
| CACCCAATTGAATCATTCGG+TGG | 0.622335 | 1_3:+9803340 | None:intergenic |
| GAAGATTAAGGGAAGTCGTG+AGG | 0.622880 | 1_3:-9801984 | Msa0102900:CDS |
| TATTAGGATGGCATTTCTCG+AGG | 0.625254 | 1_3:+9802674 | None:intergenic |
| GCGTTGGCAACGTCGAACAA+TGG | 0.625359 | 1_3:-9804614 | Msa0102900:CDS |
| GCTTATAAGAGCTTTGAAGA+GGG | 0.626136 | 1_3:+9803287 | None:intergenic |
| AGGCAAGAGATGCTACGCGC+TGG | 0.626231 | 1_3:-9803105 | Msa0102900:CDS |
| CATACTGGTACATGTATGGA+GGG | 0.627303 | 1_3:-9802036 | Msa0102900:CDS |
| TAATATCATCAAATACCTCA+CGG | 0.632598 | 1_3:+9803466 | None:intergenic |
| TAGGCATACCAACCTTAGAG+TGG | 0.638621 | 1_3:+9802935 | None:intergenic |
| ACGTTGCCAACGCAGTTGAG+GGG | 0.639242 | 1_3:+9804624 | None:intergenic |
| TGATGTGAAGGAGTTGAGTG+AGG | 0.642505 | 1_3:-9804496 | Msa0102900:CDS |
| CGCAGTTGAGGGGAAAGCGG+CGG | 0.643012 | 1_3:+9804634 | None:intergenic |
| AGATGTAAGAGATTTCACTA+AGG | 0.650087 | 1_3:-9801822 | Msa0102900:CDS |
| TACCAGTATGCAAGAACACA+AGG | 0.651343 | 1_3:+9802049 | None:intergenic |
| AAGATTGCGGAAAAGTGTGA+AGG | 0.663910 | 1_3:+9804707 | None:intergenic |
| CACAATCAATATATGGAACG+TGG | 0.669238 | 1_3:+9803416 | None:intergenic |
| AGGTAGAACGCATTGAAGAG+AGG | 0.675671 | 1_3:+9804727 | None:intergenic |
| CATCCTACTTCTAAGCCAAG+TGG | 0.677886 | 1_3:-9802196 | Msa0102900:CDS |
| TGATGATCATAGTTGGACTG+AGG | 0.691050 | 1_3:-9801705 | Msa0102900:three_prime_UTR |
| AGGAGGCTGAAGAAAACAAG+CGG | 0.696169 | 1_3:-9804536 | Msa0102900:CDS |
| GTGCATAAAGATATTTATGG+TGG | 0.703198 | 1_3:-9803186 | Msa0102900:CDS |
| GAATTATGCAAGCTAAGACG+CGG | 0.705558 | 1_3:+9803309 | None:intergenic |
| ACTAGGCTAGCAGATTACAT+GGG | 0.706145 | 1_3:-9803513 | Msa0102900:CDS |
| CAAGTTTACAAAGTGCCGTG+AGG | 0.713955 | 1_3:-9803481 | Msa0102900:CDS |
| TGGTATTGATGAAAACCAAG+AGG | 0.717050 | 1_3:-9803085 | Msa0102900:CDS |
| GAGGGCATCGAAATTCATCG+GGG | 0.720882 | 1_3:-9802018 | Msa0102900:CDS |
| ATTGTTGTTGATACATAACA+TGG | 0.723106 | 1_3:-9804814 | None:intergenic |
| AAGCTCTTATAAGCGAACCA+GGG | 0.725063 | 1_3:-9803278 | Msa0102900:CDS |
| ATACTGACTGACCCTAAACG+CGG | 0.751990 | 1_3:+9804308 | None:intergenic |
| AGGGCATCGAAATTCATCGG+GGG | 0.752383 | 1_3:-9802017 | Msa0102900:CDS |
| GAAAGTTGGTAAAATTGACA+AGG | 0.752517 | 1_3:-9802617 | Msa0102900:CDS |
| ACACAAAAGCCTGTGATGGG+GGG | 0.758936 | 1_3:+9802971 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACTAAATCTATGTT+TGG | + | chr1_3:9802255-9802274 | None:intergenic | 15.0% |
| !! | TTTAGTAAATAAACATATGA+TGG | + | chr1_3:9803602-9803621 | None:intergenic | 15.0% |
| !! | ATACTATATATAACACTATT+AGG | + | chr1_3:9803695-9803714 | None:intergenic | 15.0% |
| !! | TAGTATATATTTAGATTCTT+TGG | - | chr1_3:9803709-9803728 | Msa0102900:intron | 15.0% |
| !!! | TCTTCAATTCAATTTGTTTT+AGG | - | chr1_3:9802302-9802321 | Msa0102900:CDS | 20.0% |
| !!! | CTTCAATTCAATTTGTTTTA+GGG | - | chr1_3:9802303-9802322 | Msa0102900:CDS | 20.0% |
| !! | AATTTCTTTCTTGAATATCT+AGG | + | chr1_3:9802346-9802365 | None:intergenic | 20.0% |
| !! | TAGATATTCAAGAAAGAAAT+TGG | - | chr1_3:9802345-9802364 | Msa0102900:CDS | 20.0% |
| !!! | AAGGTTTTAGTTACTAATAT+CGG | - | chr1_3:9802459-9802478 | Msa0102900:CDS | 20.0% |
| !! | CTGATTTCATAATAAATTCA+AGG | + | chr1_3:9802588-9802607 | None:intergenic | 20.0% |
| !! | CAGGGAAAATAATTAAATTT+GGG | + | chr1_3:9802756-9802775 | None:intergenic | 20.0% |
| !!! | TTTGATGATATTATCAATCA+AGG | - | chr1_3:9802894-9802913 | Msa0102900:CDS | 20.0% |
| !! | TATATATAACACTATTAGGA+TGG | + | chr1_3:9803691-9803710 | None:intergenic | 20.0% |
| !!! | CATCAATTTCATACTTATTT+TGG | + | chr1_3:9803892-9803911 | None:intergenic | 20.0% |
| !!! | ATTCAAGTTTTTCCATTAAT+GGG | + | chr1_3:9803916-9803935 | None:intergenic | 20.0% |
| !!! | TATTCAAGTTTTTCCATTAA+TGG | + | chr1_3:9803917-9803936 | None:intergenic | 20.0% |
| !! | CAAAATTGAAATGGATAATA+TGG | + | chr1_3:9804069-9804088 | None:intergenic | 20.0% |
| !!! | ATTATCCATTTCAATTTTGA+TGG | - | chr1_3:9804070-9804089 | Msa0102900:intron | 20.0% |
| !!! | TTGTACTTAATGGTTTTTTT+TGG | - | chr1_3:9804746-9804765 | Msa0102900:CDS | 20.0% |
| !!! | TGTACTTAATGGTTTTTTTT+GGG | - | chr1_3:9804747-9804766 | Msa0102900:CDS | 20.0% |
| !! | ACTTTCATTTCTCTACATTT+TGG | - | chr1_3:9802079-9802098 | Msa0102900:CDS | 25.0% |
| !!! | TACATTTTGGTATGTATGTT+TGG | - | chr1_3:9802092-9802111 | Msa0102900:CDS | 25.0% |
| !!! | AGATTTAGTTTTTTTGCTTG+TGG | - | chr1_3:9802260-9802279 | Msa0102900:CDS | 25.0% |
| !!! | GATTTAGTTTTTTTGCTTGT+GGG | - | chr1_3:9802261-9802280 | Msa0102900:CDS | 25.0% |
| !! | TACCAATTCTGAAAAAAGAA+AGG | + | chr1_3:9802504-9802523 | None:intergenic | 25.0% |
| !! | TACTGATTGGAATTAGTATA+TGG | - | chr1_3:9802658-9802677 | Msa0102900:CDS | 25.0% |
| ! | GCAGGGAAAATAATTAAATT+TGG | + | chr1_3:9802757-9802776 | None:intergenic | 25.0% |
| !! | TAATTATTTTCCCTGCTTAA+AGG | - | chr1_3:9802761-9802780 | Msa0102900:CDS | 25.0% |
| ! | TAATATCATCAAATACCTCA+CGG | + | chr1_3:9802887-9802906 | None:intergenic | 25.0% |
| ! | TGAGTTTATATATCATCGTT+TGG | - | chr1_3:9803124-9803143 | Msa0102900:CDS | 25.0% |
| ! | AAATATCTTTATGCACATCA+AGG | + | chr1_3:9803160-9803179 | None:intergenic | 25.0% |
| ! | GATGTGCATAAAGATATTTA+TGG | - | chr1_3:9803161-9803180 | Msa0102900:CDS | 25.0% |
| ! | TTCTATTCTTTCTTTGTCTA+TGG | + | chr1_3:9803219-9803238 | None:intergenic | 25.0% |
| !! | ATAAACATATGATGGTGTAA+GGG | + | chr1_3:9803594-9803613 | None:intergenic | 25.0% |
| !! | AATAAACATATGATGGTGTA+AGG | + | chr1_3:9803595-9803614 | None:intergenic | 25.0% |
| ! | ACTAAACATGTACTTCAATA+TGG | - | chr1_3:9803616-9803635 | Msa0102900:intron | 25.0% |
| ! | TATGGAATCACATGATAAAT+TGG | - | chr1_3:9803634-9803653 | Msa0102900:intron | 25.0% |
| ! | TTAAGTGATTTCCTGAATAT+AGG | + | chr1_3:9803841-9803860 | None:intergenic | 25.0% |
| ! | ATATTCAGGAAATCACTTAA+AGG | - | chr1_3:9803841-9803860 | Msa0102900:intron | 25.0% |
| !!! | TTCAAGTTTTTCCATTAATG+GGG | + | chr1_3:9803915-9803934 | None:intergenic | 25.0% |
| !! | TCTGTTCTTTATTTAACTTC+AGG | + | chr1_3:9803982-9804001 | None:intergenic | 25.0% |
| ! | AATTGCCATCAAAATTGAAA+TGG | + | chr1_3:9804078-9804097 | None:intergenic | 25.0% |
| ! | CTTACATCTTCAAGAATATA+TGG | + | chr1_3:9804517-9804536 | None:intergenic | 25.0% |
| ! | AATCAGACGAATGAAAAAAA+AGG | - | chr1_3:9804611-9804630 | Msa0102900:CDS | 25.0% |
| !!! | TGTTTGACTTTTGTACTTAA+TGG | - | chr1_3:9804736-9804755 | Msa0102900:CDS | 25.0% |
| ! | AGTGATCAAAATATTCAAGA+AGG | + | chr1_3:9804806-9804825 | None:intergenic | 25.0% |
| ACTTTGATTAGGATTCTGAA+TGG | - | chr1_3:9801945-9801964 | Msa0102900:CDS | 30.0% | |
| CTTTGATTAGGATTCTGAAT+GGG | - | chr1_3:9801946-9801965 | Msa0102900:CDS | 30.0% | |
| ATATCATTATGCATTGCTTG+CGG | - | chr1_3:9802003-9802022 | Msa0102900:CDS | 30.0% | |
| TGTAGAGAAATGAAAGTGAA+AGG | + | chr1_3:9802076-9802095 | None:intergenic | 30.0% | |
| AAGAACTATAAACCAAGACT+TGG | + | chr1_3:9802400-9802419 | None:intergenic | 30.0% | |
| TTCTTTATGCTACAAAGCTT+AGG | - | chr1_3:9802415-9802434 | Msa0102900:CDS | 30.0% | |
| TCTTTATGCTACAAAGCTTA+GGG | - | chr1_3:9802416-9802435 | Msa0102900:CDS | 30.0% | |
| !! | TAGGGAGGAATTTAAGTTTT+AGG | - | chr1_3:9802434-9802453 | Msa0102900:CDS | 30.0% |
| !! | AGGGAGGAATTTAAGTTTTA+GGG | - | chr1_3:9802435-9802454 | Msa0102900:CDS | 30.0% |
| !!! | GGAATTTAAGTTTTAGGGAA+AGG | - | chr1_3:9802440-9802459 | Msa0102900:CDS | 30.0% |
| !!! | TGCCTTTCTTTTTTCAGAAT+TGG | - | chr1_3:9802499-9802518 | Msa0102900:CDS | 30.0% |
| TACTAATTCCAATCAGTAGA+AGG | + | chr1_3:9802656-9802675 | None:intergenic | 30.0% | |
| CATTTGTATACCTTTAAGCA+GGG | + | chr1_3:9802774-9802793 | None:intergenic | 30.0% | |
| TATACAAATGGATGATGCAA+CGG | - | chr1_3:9802784-9802803 | Msa0102900:CDS | 30.0% | |
| ! | TTGATTTTGCTCTTTCTACT+AGG | - | chr1_3:9802820-9802839 | Msa0102900:CDS | 30.0% |
| ! | ATATAAACTCAGCTTGCTTA+AGG | + | chr1_3:9803115-9803134 | None:intergenic | 30.0% |
| TATCATCGTTTGGTTACAAA+TGG | - | chr1_3:9803134-9803153 | Msa0102900:CDS | 30.0% | |
| GTGCATAAAGATATTTATGG+TGG | - | chr1_3:9803164-9803183 | Msa0102900:CDS | 30.0% | |
| ATATTTATGGTGGCCTAATT+TGG | - | chr1_3:9803174-9803193 | Msa0102900:CDS | 30.0% | |
| !! | AAGAAAGAATAGAAGCATTG+AGG | - | chr1_3:9803225-9803244 | Msa0102900:CDS | 30.0% |
| CATTTCTCTAAATATCTCCA+AGG | + | chr1_3:9803447-9803466 | None:intergenic | 30.0% | |
| AGAGAAATGAAGTTGAAACT+AGG | - | chr1_3:9803458-9803477 | Msa0102900:CDS | 30.0% | |
| AAGTTGAAACTAGGTAAGAT+AGG | - | chr1_3:9803467-9803486 | Msa0102900:CDS | 30.0% | |
| ! | CATGATTGATTCTGCAAATT+CGG | + | chr1_3:9803543-9803562 | None:intergenic | 30.0% |
| ! | TAAACATATGATGGTGTAAG+GGG | + | chr1_3:9803593-9803612 | None:intergenic | 30.0% |
| ATCACATGATAAATTGGAAG+AGG | - | chr1_3:9803640-9803659 | Msa0102900:intron | 30.0% | |
| TTAGATTCTTTGGTGAAAGT+TGG | - | chr1_3:9803719-9803738 | Msa0102900:intron | 30.0% | |
| !! | GAAAGTTGGTAAAATTGACA+AGG | - | chr1_3:9803733-9803752 | Msa0102900:intron | 30.0% |
| TAAGATGATGTTACATGATC+GGG | + | chr1_3:9803810-9803829 | None:intergenic | 30.0% | |
| GTAAGATGATGTTACATGAT+CGG | + | chr1_3:9803811-9803830 | None:intergenic | 30.0% | |
| TCATGTAACATCATCTTACA+TGG | - | chr1_3:9803812-9803831 | Msa0102900:intron | 30.0% | |
| TTACATGGATACCTATATTC+AGG | - | chr1_3:9803827-9803846 | Msa0102900:intron | 30.0% | |
| ! | TAATTTTCCTTCTCAAACTC+TGG | + | chr1_3:9803943-9803962 | None:intergenic | 30.0% |
| ! | TTATTTAACTTCAGGCTCAT+TGG | + | chr1_3:9803974-9803993 | None:intergenic | 30.0% |
| ! | AACAGAGAGAAATACTGATT+GGG | - | chr1_3:9803996-9804015 | Msa0102900:intron | 30.0% |
| !!! | TGAACAAGTTTTGGAATTGT+AGG | + | chr1_3:9804268-9804287 | None:intergenic | 30.0% |
| ! | CAATTCCAAAACTTGTTCAT+AGG | - | chr1_3:9804269-9804288 | Msa0102900:intron | 30.0% |
| ! | GATGTTTTGCTGAAGATTAA+GGG | - | chr1_3:9804355-9804374 | Msa0102900:CDS | 30.0% |
| ! | TCCATTGATTGTAAAGTCAA+GGG | - | chr1_3:9804424-9804443 | Msa0102900:CDS | 30.0% |
| AGATGTAAGAGATTTCACTA+AGG | - | chr1_3:9804528-9804547 | Msa0102900:CDS | 30.0% | |
| ! | ATTTTTGCTTAGTAGTATGC+CGG | - | chr1_3:9804671-9804690 | Msa0102900:CDS | 30.0% |
| GTTATGACTGAAGTTGAAAC+AGG | + | chr1_3:9801585-9801604 | None:intergenic | 35.0% | |
| AAATATCGTTGTTGTCAGGA+AGG | + | chr1_3:9801776-9801795 | None:intergenic | 35.0% | |
| !!! | CTCACCTCTAGAATCAATTT+TGG | - | chr1_3:9802207-9802226 | Msa0102900:CDS | 35.0% |
| !!! | CTCTAGAATCAATTTTGGCT+CGG | - | chr1_3:9802212-9802231 | Msa0102900:CDS | 35.0% |
| ! | TTTTGCTTGTGGGAATTGAT+TGG | - | chr1_3:9802271-9802290 | Msa0102900:CDS | 35.0% |
| CTGATGTAAGACTAGCAATA+AGG | + | chr1_3:9802535-9802554 | None:intergenic | 35.0% | |
| ATGTGTTTCCTTCTACTGAT+TGG | - | chr1_3:9802645-9802664 | Msa0102900:CDS | 35.0% | |
| TGGGAACAAATTACAGCTTA+AGG | + | chr1_3:9802737-9802756 | None:intergenic | 35.0% | |
| CCATTTGTATACCTTTAAGC+AGG | + | chr1_3:9802775-9802794 | None:intergenic | 35.0% | |
| ! | CCTGCTTAAAGGTATACAAA+TGG | - | chr1_3:9802772-9802791 | Msa0102900:CDS | 35.0% |
| CACAATCAATATATGGAACG+TGG | + | chr1_3:9802937-9802956 | None:intergenic | 35.0% | |
| ! | CACGTTCCATATATTGATTG+TGG | - | chr1_3:9802935-9802954 | Msa0102900:CDS | 35.0% |
| GGTAAGCCACAATCAATATA+TGG | + | chr1_3:9802944-9802963 | None:intergenic | 35.0% | |
| ! | TACCTTAGTTCTTCTGTTCA+AGG | - | chr1_3:9802960-9802979 | Msa0102900:CDS | 35.0% |
| AACCTTGAACAGAAGAACTA+AGG | + | chr1_3:9802965-9802984 | None:intergenic | 35.0% | |
| TTCTTCTGTTCAAGGTTGTT+TGG | - | chr1_3:9802968-9802987 | Msa0102900:CDS | 35.0% | |
| ATTCCACCGAATGATTCAAT+TGG | - | chr1_3:9803007-9803026 | Msa0102900:CDS | 35.0% | |
| TTCCACCGAATGATTCAATT+GGG | - | chr1_3:9803008-9803027 | Msa0102900:CDS | 35.0% | |
| ATCCACCCAATTGAATCATT+CGG | + | chr1_3:9803016-9803035 | None:intergenic | 35.0% | |
| !! | GCTTATAAGAGCTTTGAAGA+GGG | + | chr1_3:9803066-9803085 | None:intergenic | 35.0% |
| !! | TGGTATTGATGAAAACCAAG+AGG | - | chr1_3:9803265-9803284 | Msa0102900:CDS | 35.0% |
| GCTTTCAAACTGCAAAAGTT+TGG | + | chr1_3:9803357-9803376 | None:intergenic | 35.0% | |
| ! | ACAGGCTTTTGTGTACAAAA+TGG | - | chr1_3:9803388-9803407 | Msa0102900:CDS | 35.0% |
| AATATCTCCAAGGACTTCAT+AGG | + | chr1_3:9803437-9803456 | None:intergenic | 35.0% | |
| ! | ATGACAGATTTTGTCAAGAG+TGG | - | chr1_3:9803560-9803579 | Msa0102900:CDS | 35.0% |
| TACTTGCATCACGAAACATT+TGG | + | chr1_3:9803775-9803794 | None:intergenic | 35.0% | |
| ATGTTTCGTGATGCAAGTAT+TGG | - | chr1_3:9803776-9803795 | Msa0102900:intron | 35.0% | |
| TGAAATTGATGCCCCATTAA+TGG | - | chr1_3:9803901-9803920 | Msa0102900:intron | 35.0% | |
| AATACATCCAGAGTTTGAGA+AGG | - | chr1_3:9803933-9803952 | Msa0102900:intron | 35.0% | |
| GAACAGAGAGAAATACTGAT+TGG | - | chr1_3:9803995-9804014 | Msa0102900:intron | 35.0% | |
| ! | GCTTTTATGCCAATCAGTTT+TGG | - | chr1_3:9804230-9804249 | Msa0102900:intron | 35.0% |
| ! | TTCCAAAACTTGTTCATAGG+TGG | - | chr1_3:9804272-9804291 | Msa0102900:intron | 35.0% |
| ! | AACCACCTATGAACAAGTTT+TGG | + | chr1_3:9804277-9804296 | None:intergenic | 35.0% |
| ! | GGATGTTTTGCTGAAGATTA+AGG | - | chr1_3:9804354-9804373 | Msa0102900:CDS | 35.0% |
| GACTTTACAATCAATGGACA+TGG | + | chr1_3:9804422-9804441 | None:intergenic | 35.0% | |
| ! | GTCCATTGATTGTAAAGTCA+AGG | - | chr1_3:9804423-9804442 | Msa0102900:CDS | 35.0% |
| TCCCTTGACTTTACAATCAA+TGG | + | chr1_3:9804428-9804447 | None:intergenic | 35.0% | |
| TGATTGTAAAGTCAAGGGAA+AGG | - | chr1_3:9804429-9804448 | Msa0102900:CDS | 35.0% | |
| GATTGTAAAGTCAAGGGAAA+GGG | - | chr1_3:9804430-9804449 | Msa0102900:CDS | 35.0% | |
| !! | GTATTCTGGATTGGTATTCT+GGG | - | chr1_3:9804457-9804476 | Msa0102900:CDS | 35.0% |
| !! | TACAACTTGGTTCTGGAAAT+TGG | - | chr1_3:9804486-9804505 | Msa0102900:CDS | 35.0% |
| AGGTGTGAATATAATGAGAC+AGG | - | chr1_3:9804552-9804571 | Msa0102900:CDS | 35.0% | |
| ACTGCAATGATGATCATAGT+TGG | - | chr1_3:9804638-9804657 | Msa0102900:CDS | 35.0% | |
| ! | TGTAAAAGCATAACCTAGTC+CGG | + | chr1_3:9804693-9804712 | None:intergenic | 35.0% |
| ! | ACTAGGTTATGCTTTTACAC+TGG | - | chr1_3:9804694-9804713 | Msa0102900:CDS | 35.0% |
| GTTGAAACAGGAAGAAGAAG+TGG | + | chr1_3:9801573-9801592 | None:intergenic | 40.0% | |
| TGAAGAGAGGTTAGGGTTTA+AGG | + | chr1_3:9801613-9801632 | None:intergenic | 40.0% | |
| AACGCATTGAAGAGAGGTTA+GGG | + | chr1_3:9801620-9801639 | None:intergenic | 40.0% | |
| ! | AAGATTGCGGAAAAGTGTGA+AGG | + | chr1_3:9801646-9801665 | None:intergenic | 40.0% |
| CGGAAAATATCGTTGTTGTC+AGG | + | chr1_3:9801780-9801799 | None:intergenic | 40.0% | |
| ! | AACGATATTTTCCGTTTCGC+AGG | - | chr1_3:9801786-9801805 | Msa0102900:CDS | 40.0% |
| ! | ACGATATTTTCCGTTTCGCA+GGG | - | chr1_3:9801787-9801806 | Msa0102900:CDS | 40.0% |
| !! | TTGGCTTTGTAAGGAGTTAC+CGG | - | chr1_3:9801908-9801927 | Msa0102900:CDS | 40.0% |
| ! | CTAGAGGTGAGACTTGATTT+TGG | + | chr1_3:9802198-9802217 | None:intergenic | 40.0% |
| ! | CGAGCCAAAATTGATTCTAG+AGG | + | chr1_3:9802214-9802233 | None:intergenic | 40.0% |
| ! | TCTATGTTTGGTTCCACCTT+TGG | + | chr1_3:9802243-9802262 | None:intergenic | 40.0% |
| TTATGCTACAAAGCTTAGGG+AGG | - | chr1_3:9802419-9802438 | Msa0102900:CDS | 40.0% | |
| TAATCAACTAATACCCGACC+AGG | + | chr1_3:9802623-9802642 | None:intergenic | 40.0% | |
| TACTAGGCTAGCAGATTACA+TGG | - | chr1_3:9802836-9802855 | Msa0102900:CDS | 40.0% | |
| ACTAGGCTAGCAGATTACAT+GGG | - | chr1_3:9802837-9802856 | Msa0102900:CDS | 40.0% | |
| GAATTATGCAAGCTAAGACG+CGG | + | chr1_3:9803044-9803063 | None:intergenic | 40.0% | |
| !! | CGCTTATAAGAGCTTTGAAG+AGG | + | chr1_3:9803067-9803086 | None:intergenic | 40.0% |
| AAAGCTCTTATAAGCGAACC+AGG | - | chr1_3:9803071-9803090 | Msa0102900:CDS | 40.0% | |
| AAGCTCTTATAAGCGAACCA+GGG | - | chr1_3:9803072-9803091 | Msa0102900:CDS | 40.0% | |
| !! | TACTGCTTTGAAAAGTTCCC+TGG | + | chr1_3:9803092-9803111 | None:intergenic | 40.0% |
| GATAGCTATGCAGCCAAATT+AGG | + | chr1_3:9803190-9803209 | None:intergenic | 40.0% | |
| AATTTGGCTGCATAGCTATC+AGG | - | chr1_3:9803190-9803209 | Msa0102900:CDS | 40.0% | |
| TGTACACAAAAGCCTGTGAT+GGG | + | chr1_3:9803385-9803404 | None:intergenic | 40.0% | |
| TTGTACACAAAAGCCTGTGA+TGG | + | chr1_3:9803386-9803405 | None:intergenic | 40.0% | |
| CAAAATGGAAGTCCACTCTA+AGG | - | chr1_3:9803403-9803422 | Msa0102900:CDS | 40.0% | |
| TATTAGGATGGCATTTCTCG+AGG | + | chr1_3:9803679-9803698 | None:intergenic | 40.0% | |
| ! | GTTGGTAAAATTGACAAGGC+TGG | - | chr1_3:9803737-9803756 | Msa0102900:intron | 40.0% |
| !! | TACATCGCCAGTTTTATGAG+TGG | - | chr1_3:9804128-9804147 | Msa0102900:intron | 40.0% |
| GATGTAGCCACTCATAAAAC+TGG | + | chr1_3:9804138-9804157 | None:intergenic | 40.0% | |
| GCAATGGTGCAAAACTTATC+TGG | + | chr1_3:9804196-9804215 | None:intergenic | 40.0% | |
| ! | ACCATTGCAAGCTCTCATTT+TGG | - | chr1_3:9804208-9804227 | Msa0102900:intron | 40.0% |
| ACCATTTGGCCAAAACTGAT+TGG | + | chr1_3:9804242-9804261 | None:intergenic | 40.0% | |
| ! | GGAATTGTAGGTTGACCATT+TGG | + | chr1_3:9804256-9804275 | None:intergenic | 40.0% |
| TACCAGTATGCAAGAACACA+AGG | + | chr1_3:9804304-9804323 | None:intergenic | 40.0% | |
| CTTGCATACTGGTACATGTA+TGG | - | chr1_3:9804310-9804329 | Msa0102900:intron | 40.0% | |
| CATACTGGTACATGTATGGA+GGG | - | chr1_3:9804314-9804333 | Msa0102900:intron | 40.0% | |
| AAGATTAAGGGAAGTCGTGA+GGG | - | chr1_3:9804367-9804386 | Msa0102900:CDS | 40.0% | |
| TAAAGTCAAGGGAAAGGGAA+AGG | - | chr1_3:9804435-9804454 | Msa0102900:CDS | 40.0% | |
| !! | AAGGGAAAGGTATTCTGGAT+TGG | - | chr1_3:9804448-9804467 | Msa0102900:CDS | 40.0% |
| !! | GGTATTCTGGATTGGTATTC+TGG | - | chr1_3:9804456-9804475 | Msa0102900:CDS | 40.0% |
| ! | TTCTGGGAAGCAATACAACT+TGG | - | chr1_3:9804473-9804492 | Msa0102900:CDS | 40.0% |
| GAAGCAATACAACTTGGTTC+TGG | - | chr1_3:9804479-9804498 | Msa0102900:CDS | 40.0% | |
| GTAAGAGATTTCACTAAGGC+AGG | - | chr1_3:9804532-9804551 | Msa0102900:CDS | 40.0% | |
| TGATGATCATAGTTGGACTG+AGG | - | chr1_3:9804645-9804664 | Msa0102900:CDS | 40.0% | |
| ! | AGGTTATGCTTTTACACTGG+TGG | - | chr1_3:9804697-9804716 | Msa0102900:CDS | 40.0% |
| TTGGGCTTAAGTAACTTCCA+CGG | - | chr1_3:9804765-9804784 | Msa0102900:CDS | 40.0% | |
| !! | GGCTTTCATTTTTACAACCG+TGG | + | chr1_3:9804785-9804804 | None:intergenic | 40.0% |
| GAACGCATTGAAGAGAGGTT+AGG | + | chr1_3:9801621-9801640 | None:intergenic | 45.0% | |
| AGGTAGAACGCATTGAAGAG+AGG | + | chr1_3:9801626-9801645 | None:intergenic | 45.0% | |
| TGTTGTCAGGAAGGTCTTGA+TGG | + | chr1_3:9801767-9801786 | None:intergenic | 45.0% | |
| ! | CGATATTTTCCGTTTCGCAG+GGG | - | chr1_3:9801788-9801807 | Msa0102900:CDS | 45.0% |
| AGGAGGCTGAAGAAAACAAG+CGG | - | chr1_3:9801814-9801833 | Msa0102900:CDS | 45.0% | |
| AACTCCTTCACATCAACCTC+CGG | + | chr1_3:9801849-9801868 | None:intergenic | 45.0% | |
| TGATGTGAAGGAGTTGAGTG+AGG | - | chr1_3:9801854-9801873 | Msa0102900:CDS | 45.0% | |
| CTTACAAAGCCAAGCAACTC+TGG | + | chr1_3:9801901-9801920 | None:intergenic | 45.0% | |
| !! | CAGAGTTGCTTGGCTTTGTA+AGG | - | chr1_3:9801899-9801918 | Msa0102900:CDS | 45.0% |
| ATAAGGCGGGGACTTTGATT+AGG | - | chr1_3:9801934-9801953 | Msa0102900:CDS | 45.0% | |
| TTAGGATTCTGAATGGGCAG+AGG | - | chr1_3:9801952-9801971 | Msa0102900:CDS | 45.0% | |
| ! | ATACTGACTGACCCTAAACG+CGG | + | chr1_3:9802045-9802064 | None:intergenic | 45.0% |
| ! | ATGTTTGGTTCCACCTTTGG+AGG | + | chr1_3:9802240-9802259 | None:intergenic | 45.0% |
| ! | CAAGACTTGGTTTCAACAGC+TGG | + | chr1_3:9802387-9802406 | None:intergenic | 45.0% |
| CAGCTGTTGAAACCAAGTCT+TGG | - | chr1_3:9802385-9802404 | Msa0102900:CDS | 45.0% | |
| ! | AATCAGTCTTTTGTCCCTCC+TGG | - | chr1_3:9802602-9802621 | Msa0102900:CDS | 45.0% |
| AATGGATGATGCAACGGAGT+TGG | - | chr1_3:9802790-9802809 | Msa0102900:CDS | 45.0% | |
| !! | TGATGCAACGGAGTTGGTAT+CGG | - | chr1_3:9802796-9802815 | Msa0102900:CDS | 45.0% |
| !! | CAAGTTTACAAAGTGCCGTG+AGG | - | chr1_3:9802869-9802888 | Msa0102900:CDS | 45.0% |
| CACCCAATTGAATCATTCGG+TGG | + | chr1_3:9803013-9803032 | None:intergenic | 45.0% | |
| CACCGAATGATTCAATTGGG+TGG | - | chr1_3:9803011-9803030 | Msa0102900:CDS | 45.0% | |
| AGATCGATACTAGCACCTCT+TGG | + | chr1_3:9803283-9803302 | None:intergenic | 45.0% | |
| !! | AGGTGCTAGTATCGATCTTG+AGG | - | chr1_3:9803285-9803304 | Msa0102900:CDS | 45.0% |
| !! | GGTGCTAGTATCGATCTTGA+GGG | - | chr1_3:9803286-9803305 | Msa0102900:CDS | 45.0% |
| TGGAGGAAGCAGAGAAAACT+TGG | - | chr1_3:9803330-9803349 | Msa0102900:CDS | 45.0% | |
| TACACAAAAGCCTGTGATGG+GGG | + | chr1_3:9803383-9803402 | None:intergenic | 45.0% | |
| GTACACAAAAGCCTGTGATG+GGG | + | chr1_3:9803384-9803403 | None:intergenic | 45.0% | |
| !! | ATGGAAGTCCACTCTAAGGT+TGG | - | chr1_3:9803407-9803426 | Msa0102900:CDS | 45.0% |
| TAGGCATACCAACCTTAGAG+TGG | + | chr1_3:9803418-9803437 | None:intergenic | 45.0% | |
| TGGTATGCCTATGAAGTCCT+TGG | - | chr1_3:9803427-9803446 | Msa0102900:CDS | 45.0% | |
| CATCCTACTTCTAAGCCAAG+TGG | - | chr1_3:9804154-9804173 | Msa0102900:intron | 45.0% | |
| TCACCACTTGGCTTAGAAGT+AGG | + | chr1_3:9804160-9804179 | None:intergenic | 45.0% | |
| ATGTTCTCACTGTCACCACT+TGG | + | chr1_3:9804172-9804191 | None:intergenic | 45.0% | |
| GCCAAAATGAGAGCTTGCAA+TGG | + | chr1_3:9804212-9804231 | None:intergenic | 45.0% | |
| !! | GCCAATCAGTTTTGGCCAAA+TGG | - | chr1_3:9804238-9804257 | Msa0102900:intron | 45.0% |
| CACCTTGTGTTCTTGCATAC+TGG | - | chr1_3:9804299-9804318 | Msa0102900:intron | 45.0% | |
| GCATACTGGTACATGTATGG+AGG | - | chr1_3:9804313-9804332 | Msa0102900:intron | 45.0% | |
| !! | TGGAGGGCATCGAAATTCAT+CGG | - | chr1_3:9804330-9804349 | Msa0102900:CDS | 45.0% |
| GAAGATTAAGGGAAGTCGTG+AGG | - | chr1_3:9804366-9804385 | Msa0102900:CDS | 45.0% | |
| !! | AGGGAAAGGGAAAGGTATTC+TGG | - | chr1_3:9804443-9804462 | Msa0102900:CDS | 45.0% |
| GAGTGGAGAGGGTAAGATTG+CGG | + | chr1_3:9801659-9801678 | None:intergenic | 50.0% | |
| ! | TATTTTCCGTTTCGCAGGGG+TGG | - | chr1_3:9801791-9801810 | Msa0102900:CDS | 50.0% |
| TAAGGAGTTACCGGCGCATA+AGG | - | chr1_3:9801917-9801936 | Msa0102900:CDS | 50.0% | |
| TTCTGAATGGGCAGAGGAAG+TGG | - | chr1_3:9801958-9801977 | Msa0102900:CDS | 50.0% | |
| CGAGAACGAAACCGCGTTTA+GGG | - | chr1_3:9802031-9802050 | Msa0102900:CDS | 50.0% | |
| ! | AGTCTTTTGTCCCTCCTGGT+CGG | - | chr1_3:9802606-9802625 | Msa0102900:CDS | 50.0% |
| CAACTAATACCCGACCAGGA+GGG | + | chr1_3:9802619-9802638 | None:intergenic | 50.0% | |
| TCAACTAATACCCGACCAGG+AGG | + | chr1_3:9802620-9802639 | None:intergenic | 50.0% | |
| ATATGGAACGTGGACTCGCT+GGG | + | chr1_3:9802927-9802946 | None:intergenic | 50.0% | |
| TATATGGAACGTGGACTCGC+TGG | + | chr1_3:9802928-9802947 | None:intergenic | 50.0% | |
| ! | ACACAAAAGCCTGTGATGGG+GGG | + | chr1_3:9803382-9803401 | None:intergenic | 50.0% |
| CTGATTGGGATGCTTCTAGC+TGG | - | chr1_3:9804010-9804029 | Msa0102900:intron | 50.0% | |
| !! | GGAGGGCATCGAAATTCATC+GGG | - | chr1_3:9804331-9804350 | Msa0102900:CDS | 50.0% |
| !! | GAGGGCATCGAAATTCATCG+GGG | - | chr1_3:9804332-9804351 | Msa0102900:CDS | 50.0% |
| !! | AGGGCATCGAAATTCATCGG+GGG | - | chr1_3:9804333-9804352 | Msa0102900:CDS | 50.0% |
| GCTTAGTAGTATGCCGGACT+AGG | - | chr1_3:9804677-9804696 | Msa0102900:CDS | 50.0% | |
| AGGTAGGTGGAGAGTGGAGA+GGG | + | chr1_3:9801670-9801689 | None:intergenic | 55.0% | |
| CAACGCAGTTGAGGGGAAAG+CGG | + | chr1_3:9801722-9801741 | None:intergenic | 55.0% | |
| ACGTTGCCAACGCAGTTGAG+GGG | + | chr1_3:9801729-9801748 | None:intergenic | 55.0% | |
| GACGTTGCCAACGCAGTTGA+GGG | + | chr1_3:9801730-9801749 | None:intergenic | 55.0% | |
| ! | GCGTTGGCAACGTCGAACAA+TGG | - | chr1_3:9801736-9801755 | Msa0102900:exon | 55.0% |
| TTCACATCAACCTCCGGACG+CGG | + | chr1_3:9801843-9801862 | None:intergenic | 55.0% | |
| GAAGGAGTTGAGTGAGGTGC+CGG | - | chr1_3:9801860-9801879 | Msa0102900:CDS | 55.0% | |
| ATGGGCAGAGGAAGTGGTTG+AGG | - | chr1_3:9801964-9801983 | Msa0102900:CDS | 55.0% | |
| GCGAGAACGAAACCGCGTTT+AGG | - | chr1_3:9802030-9802049 | Msa0102900:CDS | 55.0% | |
| !!! | TTTTGGCTCGGCTCCTCCAA+AGG | - | chr1_3:9802224-9802243 | Msa0102900:CDS | 55.0% |
| ! | GTCTTTTGTCCCTCCTGGTC+GGG | - | chr1_3:9802607-9802626 | Msa0102900:CDS | 55.0% |
| TATGCAAGCTAAGACGCGGC+TGG | + | chr1_3:9803040-9803059 | None:intergenic | 55.0% | |
| TGAAAGCAACCCCCCATCAC+AGG | - | chr1_3:9803370-9803389 | Msa0102900:CDS | 55.0% | |
| TAAGGGAAGTCGTGAGGGTG+TGG | - | chr1_3:9804372-9804391 | Msa0102900:CDS | 55.0% | |
| GAGGTAGGTGGAGAGTGGAG+AGG | + | chr1_3:9801671-9801690 | None:intergenic | 60.0% | |
| CGCTTTCCCCTCAACTGCGT+TGG | - | chr1_3:9801720-9801739 | Msa0102900:three_prime_UTR | 60.0% | |
| CGACGTTGCCAACGCAGTTG+AGG | + | chr1_3:9801731-9801750 | None:intergenic | 60.0% | |
| TTTCCGTTTCGCAGGGGTGG+AGG | - | chr1_3:9801794-9801813 | Msa0102900:CDS | 60.0% | |
| !! | GCGTCCGGAGGTTGATGTGA+AGG | - | chr1_3:9801842-9801861 | Msa0102900:CDS | 60.0% |
| !! | TGAGTGAGGTGCCGGAGCTA+TGG | - | chr1_3:9801868-9801887 | Msa0102900:CDS | 60.0% |
| GGAGTTACCGGCGCATAAGG+CGG | - | chr1_3:9801920-9801939 | Msa0102900:CDS | 60.0% | |
| GAGTTACCGGCGCATAAGGC+GGG | - | chr1_3:9801921-9801940 | Msa0102900:CDS | 60.0% | |
| AGTTACCGGCGCATAAGGCG+GGG | - | chr1_3:9801922-9801941 | Msa0102900:CDS | 60.0% | |
| AAAGTCCCCGCCTTATGCGC+CGG | + | chr1_3:9801930-9801949 | None:intergenic | 60.0% | |
| GCAGAGGAAGTGGTTGAGGC+AGG | - | chr1_3:9801968-9801987 | Msa0102900:CDS | 60.0% | |
| ACGTGGACTCGCTGGGAACA+CGG | + | chr1_3:9802920-9802939 | None:intergenic | 60.0% | |
| AGGCAAGAGATGCTACGCGC+TGG | - | chr1_3:9803245-9803264 | Msa0102900:CDS | 60.0% | |
| GATCTTGAGGGCCTGCGCAA+GGG | - | chr1_3:9803298-9803317 | Msa0102900:CDS | 60.0% | |
| GGTGCGAGGTAGGTGGAGAG+TGG | + | chr1_3:9801676-9801695 | None:intergenic | 65.0% | |
| ! | AAGGGAGGGTGCGAGGTAGG+TGG | + | chr1_3:9801683-9801702 | None:intergenic | 65.0% |
| GAGGTGGAGGAGGGAAGGGA+GGG | + | chr1_3:9801697-9801716 | None:intergenic | 65.0% | |
| AAAGCGGCGGAGGTGGAGGA+GGG | + | chr1_3:9801706-9801725 | None:intergenic | 65.0% | |
| AGTTGAGGGGAAAGCGGCGG+AGG | + | chr1_3:9801716-9801735 | None:intergenic | 65.0% | |
| CGCAGTTGAGGGGAAAGCGG+CGG | + | chr1_3:9801719-9801738 | None:intergenic | 65.0% | |
| CCTCCTCCACCCCTGCGAAA+CGG | + | chr1_3:9801800-9801819 | None:intergenic | 65.0% | |
| AAACAAGCGGCTGCCGCGTC+CGG | - | chr1_3:9801827-9801846 | Msa0102900:CDS | 65.0% | |
| !! | GTGAGGTGCCGGAGCTATGG+CGG | - | chr1_3:9801871-9801890 | Msa0102900:CDS | 65.0% |
| CTGGACCTCCGCCATAGCTC+CGG | + | chr1_3:9801882-9801901 | None:intergenic | 65.0% | |
| GGCGGAGGTCCAGAGTTGCT+TGG | - | chr1_3:9801889-9801908 | Msa0102900:CDS | 65.0% | |
| ! | TGGCTCGGCTCCTCCAAAGG+TGG | - | chr1_3:9802227-9802246 | Msa0102900:CDS | 65.0% |
| CGATCTTGAGGGCCTGCGCA+AGG | - | chr1_3:9803297-9803316 | Msa0102900:CDS | 65.0% | |
| TTGAGGGCCTGCGCAAGGGA+GGG | - | chr1_3:9803302-9803321 | Msa0102900:CDS | 65.0% | |
| ! | GGGAAGGGAGGGTGCGAGGT+AGG | + | chr1_3:9801686-9801705 | None:intergenic | 70.0% |
| ! | AGGAGGGAAGGGAGGGTGCG+AGG | + | chr1_3:9801690-9801709 | None:intergenic | 70.0% |
| GGAGGTGGAGGAGGGAAGGG+AGG | + | chr1_3:9801698-9801717 | None:intergenic | 70.0% | |
| GGCGGAGGTGGAGGAGGGAA+GGG | + | chr1_3:9801701-9801720 | None:intergenic | 70.0% | |
| GAAAGCGGCGGAGGTGGAGG+AGG | + | chr1_3:9801707-9801726 | None:intergenic | 70.0% | |
| TGAGGGGAAAGCGGCGGAGG+TGG | + | chr1_3:9801713-9801732 | None:intergenic | 70.0% | |
| CCGTTTCGCAGGGGTGGAGG+AGG | - | chr1_3:9801797-9801816 | Msa0102900:CDS | 70.0% | |
| !! | AGGTGCCGGAGCTATGGCGG+AGG | - | chr1_3:9801874-9801893 | Msa0102900:CDS | 70.0% |
| CTTGAGGGCCTGCGCAAGGG+AGG | - | chr1_3:9803301-9803320 | Msa0102900:CDS | 70.0% | |
| CACCTCACCCTCCCTTGCGC+AGG | + | chr1_3:9803312-9803331 | None:intergenic | 70.0% | |
| CTGCGCAAGGGAGGGTGAGG+TGG | - | chr1_3:9803310-9803329 | Msa0102900:CDS | 70.0% | |
| CGCAAGGGAGGGTGAGGTGG+AGG | - | chr1_3:9803313-9803332 | Msa0102900:CDS | 70.0% | |
| CGGCGGAGGTGGAGGAGGGA+AGG | + | chr1_3:9801702-9801721 | None:intergenic | 75.0% | |
| GGGGAAAGCGGCGGAGGTGG+AGG | + | chr1_3:9801710-9801729 | None:intergenic | 75.0% | |
| GGCCTGCGCAAGGGAGGGTG+AGG | - | chr1_3:9803307-9803326 | Msa0102900:CDS | 75.0% | |
| ! | CAAGCGGCTGCCGCGTCCGG+AGG | - | chr1_3:9801830-9801849 | Msa0102900:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 9801547 | 9804825 | 9801547 | ID=Msa0102900;Name=Msa0102900 |
| chr1_3 | mRNA | 9801547 | 9804825 | 9801547 | ID=Msa0102900-mRNA-1;Parent=Msa0102900;Name=Msa0102900-mRNA-1;_AED=0.00;_eAED=0.00;_QI=8|1|1|1|1|1|2|201|779 |
| chr1_3 | exon | 9801547 | 9803589 | 9801547 | ID=Msa0102900-mRNA-1:exon:4054;Parent=Msa0102900-mRNA-1 |
| chr1_3 | exon | 9804320 | 9804825 | 9804320 | ID=Msa0102900-mRNA-1:exon:4053;Parent=Msa0102900-mRNA-1 |
| chr1_3 | five_prime_UTR | 9804818 | 9804825 | 9804818 | ID=Msa0102900-mRNA-1:five_prime_utr;Parent=Msa0102900-mRNA-1 |
| chr1_3 | CDS | 9804320 | 9804817 | 9804320 | ID=Msa0102900-mRNA-1:cds;Parent=Msa0102900-mRNA-1 |
| chr1_3 | CDS | 9801748 | 9803589 | 9801748 | ID=Msa0102900-mRNA-1:cds;Parent=Msa0102900-mRNA-1 |
| chr1_3 | three_prime_UTR | 9801547 | 9801747 | 9801547 | ID=Msa0102900-mRNA-1:three_prime_utr;Parent=Msa0102900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
