Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880220 | KEH21070.1 | 95.490 | 776 | 19 | 1 | 1 | 760 | 1 | 776 | 0.0 | 1508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880220 | sp|F4I3P9|MURE_ARATH | 66.581 | 778 | 199 | 12 | 1 | 733 | 1 | 762 | 0.0 | 961 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880220 | A0A072U5D4 | 95.490 | 776 | 19 | 1 | 1 | 760 | 1 | 776 | 0.0 | 1508 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0880220 | -0.807991 | 3.857017e-50 | -8.615850e-47 |
| Msa0001950 | Msa0880220 | 0.814173 | 1.762610e-51 | -8.615850e-47 |
| Msa0014410 | Msa0880220 | 0.800214 | 1.600819e-48 | -8.615850e-47 |
| Msa0027540 | Msa0880220 | 0.808995 | 2.355116e-50 | -8.615850e-47 |
| Msa0029620 | Msa0880220 | 0.811510 | 6.754267e-51 | -8.615850e-47 |
| Msa0030380 | Msa0880220 | 0.809916 | 1.493538e-50 | -8.615850e-47 |
| Msa0037820 | Msa0880220 | 0.810812 | 9.566528e-51 | -8.615850e-47 |
| Msa0044710 | Msa0880220 | 0.845104 | 5.001492e-59 | -8.615850e-47 |
| Msa0050720 | Msa0880220 | 0.838804 | 2.313036e-57 | -8.615850e-47 |
| Msa0050770 | Msa0880220 | 0.830332 | 3.116481e-55 | -8.615850e-47 |
| Msa0056520 | Msa0880220 | 0.802021 | 6.836070e-49 | -8.615850e-47 |
| Msa0056690 | Msa0880220 | 0.807046 | 6.119363e-50 | -8.615850e-47 |
| Msa0067150 | Msa0880220 | 0.800980 | 1.117043e-48 | -8.615850e-47 |
| Msa0075310 | Msa0880220 | 0.813680 | 2.264629e-51 | -8.615850e-47 |
| Msa0084680 | Msa0880220 | 0.805730 | 1.159433e-49 | -8.615850e-47 |
| Msa0102900 | Msa0880220 | 0.816706 | 4.816616e-52 | -8.615850e-47 |
| Msa0114250 | Msa0880220 | 0.802379 | 5.768590e-49 | -8.615850e-47 |
| Msa0618010 | Msa0880220 | 0.810860 | 9.340473e-51 | -8.615850e-47 |
| Msa0620110 | Msa0880220 | 0.884541 | 1.755795e-71 | -8.615850e-47 |
| Msa0621120 | Msa0880220 | 0.808245 | 3.404648e-50 | -8.615850e-47 |
| Msa0628100 | Msa0880220 | 0.805465 | 1.317570e-49 | -8.615850e-47 |
| Msa0659890 | Msa0880220 | 0.881309 | 2.671202e-70 | -8.615850e-47 |
| Msa0661240 | Msa0880220 | 0.812209 | 4.756986e-51 | -8.615850e-47 |
| Msa0665790 | Msa0880220 | 0.826186 | 3.114130e-54 | -8.615850e-47 |
| Msa0669220 | Msa0880220 | 0.815199 | 1.044920e-51 | -8.615850e-47 |
| Msa0688370 | Msa0880220 | 0.964447 | 2.445603e-123 | -8.615850e-47 |
| Msa0705420 | Msa0880220 | 0.807136 | 5.857298e-50 | -8.615850e-47 |
| Msa0706600 | Msa0880220 | 0.879061 | 1.693852e-69 | -8.615850e-47 |
| Msa0727170 | Msa0880220 | 0.812011 | 5.252958e-51 | -8.615850e-47 |
| Msa0728280 | Msa0880220 | 0.844689 | 6.471635e-59 | -8.615850e-47 |
| Msa0728380 | Msa0880220 | 0.858854 | 6.189382e-63 | -8.615850e-47 |
| Msa0728540 | Msa0880220 | 0.859622 | 3.640992e-63 | -8.615850e-47 |
| Msa0743650 | Msa0880220 | 0.826458 | 2.682742e-54 | -8.615850e-47 |
| Msa0767520 | Msa0880220 | 0.802629 | 5.123956e-49 | -8.615850e-47 |
| Msa0776480 | Msa0880220 | 0.831767 | 1.385184e-55 | -8.615850e-47 |
| Msa0783340 | Msa0880220 | 0.806804 | 6.886692e-50 | -8.615850e-47 |
| Msa0828570 | Msa0880220 | 0.804177 | 2.448072e-49 | -8.615850e-47 |
| Msa0835520 | Msa0880220 | 0.814774 | 1.298004e-51 | -8.615850e-47 |
| Msa0121800 | Msa0880220 | 0.813115 | 3.012942e-51 | -8.615850e-47 |
| Msa0142420 | Msa0880220 | 0.808411 | 3.137710e-50 | -8.615850e-47 |
| Msa0155610 | Msa0880220 | 0.827937 | 1.187201e-54 | -8.615850e-47 |
| Msa0166570 | Msa0880220 | 0.822286 | 2.569920e-53 | -8.615850e-47 |
| Msa0168100 | Msa0880220 | 0.822753 | 2.001302e-53 | -8.615850e-47 |
| Msa0169620 | Msa0880220 | 0.807249 | 5.543220e-50 | -8.615850e-47 |
| Msa0171920 | Msa0880220 | 0.802531 | 5.368491e-49 | -8.615850e-47 |
| Msa0173740 | Msa0880220 | 0.810410 | 1.168794e-50 | -8.615850e-47 |
| Msa0173820 | Msa0880220 | 0.813917 | 2.008335e-51 | -8.615850e-47 |
| Msa0173830 | Msa0880220 | 0.811599 | 6.458205e-51 | -8.615850e-47 |
| Msa0182930 | Msa0880220 | 0.837247 | 5.818281e-57 | -8.615850e-47 |
| Msa0198440 | Msa0880220 | 0.800680 | 1.286693e-48 | -8.615850e-47 |
| Msa0200010 | Msa0880220 | 0.800157 | 1.644138e-48 | -8.615850e-47 |
| Msa0200950 | Msa0880220 | -0.811040 | 8.541147e-51 | -8.615850e-47 |
| Msa0238250 | Msa0880220 | -0.809979 | 1.447332e-50 | -8.615850e-47 |
| Msa0378080 | Msa0880220 | 0.829050 | 6.393163e-55 | -8.615850e-47 |
| Msa0392020 | Msa0880220 | 0.803971 | 2.702632e-49 | -8.615850e-47 |
| Msa0418430 | Msa0880220 | 0.839972 | 1.150926e-57 | -8.615850e-47 |
| Msa0431830 | Msa0880220 | 0.801888 | 7.278528e-49 | -8.615850e-47 |
| Msa0462590 | Msa0880220 | 0.818414 | 1.984819e-52 | -8.615850e-47 |
| Msa0465790 | Msa0880220 | 0.809812 | 1.572773e-50 | -8.615850e-47 |
| Msa0465800 | Msa0880220 | 0.833801 | 4.328837e-56 | -8.615850e-47 |
| Msa0468160 | Msa0880220 | 0.889534 | 2.223414e-73 | -8.615850e-47 |
| Msa0470180 | Msa0880220 | 0.809434 | 1.895827e-50 | -8.615850e-47 |
| Msa0472740 | Msa0880220 | 0.838114 | 3.484297e-57 | -8.615850e-47 |
| Msa0244270 | Msa0880220 | 0.802269 | 6.077177e-49 | -8.615850e-47 |
| Msa0265580 | Msa0880220 | 0.838531 | 2.720585e-57 | -8.615850e-47 |
| Msa0275680 | Msa0880220 | -0.813612 | 2.344041e-51 | -8.615850e-47 |
| Msa0303440 | Msa0880220 | 0.816288 | 5.974111e-52 | -8.615850e-47 |
| Msa0318070 | Msa0880220 | 0.802770 | 4.791077e-49 | -8.615850e-47 |
| Msa0344710 | Msa0880220 | 0.858103 | 1.036273e-62 | -8.615850e-47 |
| Msa0358170 | Msa0880220 | 0.877296 | 7.040603e-69 | -8.615850e-47 |
| Msa0358290 | Msa0880220 | 0.824957 | 6.089961e-54 | -8.615850e-47 |
| Msa0518040 | Msa0880220 | 0.826884 | 2.123331e-54 | -8.615850e-47 |
| Msa0522660 | Msa0880220 | 0.822060 | 2.898536e-53 | -8.615850e-47 |
| Msa0530950 | Msa0880220 | 0.825070 | 5.727446e-54 | -8.615850e-47 |
| Msa0536650 | Msa0880220 | 0.807112 | 5.926631e-50 | -8.615850e-47 |
| Msa0546840 | Msa0880220 | 0.808175 | 3.524523e-50 | -8.615850e-47 |
| Msa0571610 | Msa0880220 | 0.868113 | 8.307398e-66 | -8.615850e-47 |
| Msa0579290 | Msa0880220 | 0.811435 | 7.010833e-51 | -8.615850e-47 |
| Msa0579390 | Msa0880220 | 0.805383 | 1.370932e-49 | -8.615850e-47 |
| Msa0583740 | Msa0880220 | 0.881550 | 2.187552e-70 | -8.615850e-47 |
| Msa0590680 | Msa0880220 | 0.824573 | 7.504067e-54 | -8.615850e-47 |
| Msa0593810 | Msa0880220 | 0.814565 | 1.444023e-51 | -8.615850e-47 |
| Msa0863770 | Msa0880220 | 0.829163 | 6.004187e-55 | -8.615850e-47 |
| Msa0870150 | Msa0880220 | 0.801152 | 1.030387e-48 | -8.615850e-47 |
| Msa0880220 | Msa0903400 | 0.835131 | 2.006161e-56 | -8.615850e-47 |
| Msa0880220 | Msa0913090 | 0.821041 | 4.984086e-53 | -8.615850e-47 |
| Msa0880220 | Msa0935850 | 0.817424 | 3.321469e-52 | -8.615850e-47 |
| Msa0880220 | Msa0950320 | 0.831461 | 1.647641e-55 | -8.615850e-47 |
| Msa0880220 | Msa1001580 | 0.805590 | 1.240263e-49 | -8.615850e-47 |
| Msa0880220 | Msa1072340 | 0.818260 | 2.150271e-52 | -8.615850e-47 |
| Msa0880220 | Msa1111630 | 0.833612 | 4.825867e-56 | -8.615850e-47 |
| Msa0880220 | Msa1118150 | 0.808996 | 2.352860e-50 | -8.615850e-47 |
| Msa0880220 | Msa1119570 | 0.819608 | 1.062157e-52 | -8.615850e-47 |
| Msa0880220 | Msa1130210 | -0.802591 | 5.215975e-49 | -8.615850e-47 |
| Msa0880220 | Msa1144700 | 0.883154 | 5.704419e-71 | -8.615850e-47 |
| Msa0880220 | Msa1158090 | 0.823956 | 1.047630e-53 | -8.615850e-47 |
| Msa0880220 | Msa1159350 | 0.836903 | 7.121882e-57 | -8.615850e-47 |
| Msa0880220 | Msa1167170 | 0.831200 | 1.910089e-55 | -8.615850e-47 |
| Msa0880220 | Msa1177240 | 0.880383 | 5.743019e-70 | -8.615850e-47 |
| Msa0880220 | Msa1212760 | 0.821161 | 4.677743e-53 | -8.615850e-47 |
| Msa0880220 | Msa1260130 | 0.842767 | 2.114903e-58 | -8.615850e-47 |
| Msa0880220 | Msa1300050 | 0.812103 | 5.017228e-51 | -8.615850e-47 |
| Msa0880220 | Msa1302100 | 0.800648 | 1.305785e-48 | -8.615850e-47 |
| Msa0880220 | Msa1306580 | 0.988782 | 2.177069e-175 | -8.615850e-47 |
| Msa0880220 | Msa1317030 | 0.865364 | 6.230413e-65 | -8.615850e-47 |
| Msa0880220 | Msa1354090 | 0.817207 | 3.716050e-52 | -8.615850e-47 |
| Msa0880220 | Msa1362510 | 0.802437 | 5.611614e-49 | -8.615850e-47 |
| Msa0880220 | Msa1375340 | 0.994996 | 4.603489e-212 | -8.615850e-47 |
| Msa0880220 | Msa1378470 | 0.803208 | 3.889817e-49 | -8.615850e-47 |
| Msa0880220 | Msa1382310 | 0.804120 | 2.515462e-49 | -8.615850e-47 |
| Msa0880220 | Msa1387200 | 0.805027 | 1.627699e-49 | -8.615850e-47 |
| Msa0880220 | Msa1391490 | 0.805447 | 1.329297e-49 | -8.615850e-47 |
| Msa0880220 | Msa1398800 | 0.810139 | 1.336899e-50 | -8.615850e-47 |
| Msa0880220 | Msa1421870 | 0.828896 | 6.967283e-55 | -8.615850e-47 |
| Msa0880220 | Msa1427830 | 0.887121 | 1.884301e-72 | -8.615850e-47 |
| Msa0880220 | Msa1432390 | 0.815914 | 7.241364e-52 | -8.615850e-47 |
| Msa0880220 | Msa1440610 | 0.841756 | 3.918086e-58 | -8.615850e-47 |
| Msa0880220 | Msa1447300 | 0.816975 | 4.190364e-52 | -8.615850e-47 |
| Msa0880220 | Msa1449880 | 0.823709 | 1.197034e-53 | -8.615850e-47 |
| Msa0880220 | Msa1453620 | 0.865218 | 6.925857e-65 | -8.615850e-47 |
| Msa0880220 | Msa1454110 | 0.901212 | 3.364947e-78 | -8.615850e-47 |
| Msa0880220 | Msa1460440 | 0.817408 | 3.350126e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880220 | MtrunA17_Chr8g0386951 | 95.594 | 749 | 17 | 1 | 1 | 733 | 1 | 749 | 0.0 | 1454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880220 | AT1G63680.1 | 66.581 | 778 | 199 | 12 | 1 | 733 | 1 | 762 | 0.0 | 961 |
| Msa0880220 | AT1G63680.3 | 66.581 | 778 | 199 | 12 | 1 | 733 | 1 | 762 | 0.0 | 961 |
| Msa0880220 | AT1G63680.2 | 66.581 | 778 | 199 | 12 | 1 | 733 | 1 | 762 | 0.0 | 961 |
Find 240 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAATTCAACATGATTCT+AGG | 0.209520 | 6_1:-26746461 | Msa0880220:CDS |
| AATCAGTTGGATTCGTCTTA+TGG | 0.216741 | 6_1:-26746087 | Msa0880220:CDS |
| TGGGGTTCTGGATGCTGTTT+TGG | 0.247514 | 6_1:-26746067 | Msa0880220:CDS |
| TACTTGAGAACAACATATTT+TGG | 0.249300 | 6_1:-26742819 | Msa0880220:three_prime_UTR |
| TTGTTCTCAAGTACACTTCT+AGG | 0.250600 | 6_1:+26742829 | None:intergenic |
| TGATAGGGGCCTTTCTTTGC+AGG | 0.258876 | 6_1:-26743229 | Msa0880220:three_prime_UTR |
| CTTCTATTTGATATGTTTCA+TGG | 0.262320 | 6_1:+26743622 | None:intergenic |
| AACAGCTTCAATTTCGGATT+TGG | 0.263849 | 6_1:+26746758 | None:intergenic |
| CTCTTCAACAGCTTCAATTT+CGG | 0.267858 | 6_1:+26746752 | None:intergenic |
| CATTGCTGTTGGGGCACCCT+TGG | 0.269688 | 6_1:-26745595 | Msa0880220:CDS |
| GATGAGTTTAGCTGAGCTTT+TGG | 0.274198 | 6_1:-26746538 | Msa0880220:CDS |
| GAGTTGGATTTGTTGGTATT+TGG | 0.276747 | 6_1:+26746989 | None:intergenic |
| GAAGAGGTTGATGCAGTTCC+TGG | 0.277253 | 6_1:-26745552 | Msa0880220:CDS |
| CTGTTGCTATCTTTGTCATC+AGG | 0.281451 | 6_1:+26745169 | None:intergenic |
| AATTTGGAAGTTGAAATTAA+TGG | 0.284196 | 6_1:-26746480 | Msa0880220:CDS |
| TGTTTCGGTTTACGGGAATT+TGG | 0.293661 | 6_1:-26746496 | Msa0880220:CDS |
| TCAAATAGAAGGTGAGAAAA+AGG | 0.297061 | 6_1:-26743610 | Msa0880220:CDS |
| TGGCAGTTGGCATTGCTGTT+GGG | 0.297200 | 6_1:-26745605 | Msa0880220:intron |
| TCGGGTGGGTCGTCGTCAGC+TGG | 0.315585 | 6_1:+26747041 | None:intergenic |
| ATTGATATTGAAGATACTTT+AGG | 0.316478 | 6_1:-26746324 | Msa0880220:CDS |
| ATGCAAGAGTATCTGAAATA+TGG | 0.320054 | 6_1:-26744903 | Msa0880220:CDS |
| TGCGCCTTTGTTCGTTTCAA+TGG | 0.326884 | 6_1:-26745809 | Msa0880220:CDS |
| GTGGTTCCTGTTTCGGTTTA+CGG | 0.327895 | 6_1:-26746504 | Msa0880220:CDS |
| TACTTTAGGTTGTAAGGCTT+TGG | 0.331424 | 6_1:-26746310 | Msa0880220:CDS |
| CGGCTTGGAGTTGGATTTGT+TGG | 0.335195 | 6_1:+26746982 | None:intergenic |
| GATTCTAGGCTTGTTACTTC+TGG | 0.335990 | 6_1:-26746447 | Msa0880220:CDS |
| TAATACACCTGCTGGGATAC+TGG | 0.337449 | 6_1:-26745683 | Msa0880220:CDS |
| TGAAGATACTTTAGGTTGTA+AGG | 0.337482 | 6_1:-26746316 | Msa0880220:CDS |
| ACGGGCCTTTCGGTTATGAT+AGG | 0.338458 | 6_1:-26743245 | Msa0880220:three_prime_UTR |
| TAGAATGGTGAAGGTTGAAT+TGG | 0.341431 | 6_1:+26747172 | None:intergenic |
| GATAATCTAGCCTGCTTGAT+TGG | 0.342565 | 6_1:+26742936 | None:intergenic |
| TGGTTCCTGTTTCGGTTTAC+GGG | 0.342723 | 6_1:-26746503 | Msa0880220:CDS |
| GCGCCTTTGTTCGTTTCAAT+GGG | 0.352036 | 6_1:-26745808 | Msa0880220:CDS |
| AGGTTCGTCGGGAGCGTCTT+GGG | 0.352375 | 6_1:+26746887 | None:intergenic |
| GAGTAAAGTGGTTCCTGTTT+CGG | 0.355296 | 6_1:-26746511 | Msa0880220:CDS |
| ATGGCTCTTATTGGGATAAC+GGG | 0.357306 | 6_1:-26746216 | Msa0880220:CDS |
| ATCAGTTGGATTCGTCTTAT+GGG | 0.358561 | 6_1:-26746086 | Msa0880220:CDS |
| GGATTCGTCTTATGGGGTTC+TGG | 0.360276 | 6_1:-26746079 | Msa0880220:CDS |
| TTCTTCGCGCGGATTGGCTC+AGG | 0.360852 | 6_1:-26745986 | Msa0880220:CDS |
| TTGACGAGGAACAAGCATTT+GGG | 0.363745 | 6_1:-26745515 | Msa0880220:CDS |
| ATTTCGGATTTGGCGGGATT+AGG | 0.364946 | 6_1:+26746768 | None:intergenic |
| ATTGGGATAACGGGGACTTA+TGG | 0.366671 | 6_1:-26746207 | Msa0880220:CDS |
| ATTGACGAGGAACAAGCATT+TGG | 0.368221 | 6_1:-26745516 | Msa0880220:CDS |
| GCTAAACTCATCTTAAACTT+AGG | 0.371166 | 6_1:+26746549 | None:intergenic |
| GGGAGGGCGGAGAGGAAGTA+AGG | 0.374763 | 6_1:+26747100 | None:intergenic |
| CCCTTGGAGGATATTGTTAG+AGG | 0.378411 | 6_1:-26745579 | Msa0880220:CDS |
| GTGGCAGTTGGCATTGCTGT+TGG | 0.380126 | 6_1:-26745606 | Msa0880220:intron |
| TGAGGCTTCTTCGCGCGGAT+TGG | 0.380295 | 6_1:-26745992 | Msa0880220:CDS |
| AAGCCTCCCTGCACTCTTCT+CGG | 0.384444 | 6_1:+26743574 | None:intergenic |
| ATGGCTAAGATGCTTCATAA+TGG | 0.390726 | 6_1:-26746033 | Msa0880220:CDS |
| ATCTTCACCCTTGGGGTTGT+CGG | 0.392594 | 6_1:+26745119 | None:intergenic |
| GTGCGATGGCGGAGGGAGGG+CGG | 0.392701 | 6_1:+26747087 | None:intergenic |
| GGGTCGTCGTCAGCTGGGTT+TGG | 0.393648 | 6_1:+26747047 | None:intergenic |
| TGCTGTTGGGGCACCCTTGG+AGG | 0.395991 | 6_1:-26745592 | Msa0880220:CDS |
| CCACTGATACCAAAGGTTGC+TGG | 0.396340 | 6_1:-26743329 | Msa0880220:CDS |
| CATGAAACATATCAAATAGA+AGG | 0.403779 | 6_1:-26743621 | Msa0880220:CDS |
| GAATTGGGTTTGATAGTTGT+AGG | 0.404063 | 6_1:+26747188 | None:intergenic |
| GTCAAAAGAAACGGGCCTTT+CGG | 0.405006 | 6_1:-26743255 | Msa0880220:three_prime_UTR |
| TCTACATCGTCGACTTCATC+AGG | 0.406443 | 6_1:+26746723 | None:intergenic |
| CGGAATCAATCTGGTGAAGA+TGG | 0.407873 | 6_1:-26743201 | Msa0880220:three_prime_UTR |
| ATCTAAATCAAAGGAAGATT+CGG | 0.408810 | 6_1:+26746614 | None:intergenic |
| AATGTCACAACAGGAACTTC+AGG | 0.413089 | 6_1:+26745781 | None:intergenic |
| GCGGAATCTTCGCCTACTTC+GGG | 0.414843 | 6_1:+26747023 | None:intergenic |
| AAATTCCCGTAAACCGAAAC+AGG | 0.415050 | 6_1:+26746498 | None:intergenic |
| AGCGGAATCTTCGCCTACTT+CGG | 0.417036 | 6_1:+26747022 | None:intergenic |
| GAAGGCGAGCGCGGTCGGCT+TGG | 0.419138 | 6_1:+26746967 | None:intergenic |
| ATTTGTGTACTCAGGTGAAC+AGG | 0.423715 | 6_1:+26743285 | None:intergenic |
| TCCGCCGAAGACGATTTATT+CGG | 0.424928 | 6_1:-26746852 | Msa0880220:CDS |
| CTTTGGTATCAGTGGCTCTC+TGG | 0.425305 | 6_1:+26743337 | None:intergenic |
| ATTGTTAGCCCAGCAACCTT+TGG | 0.426686 | 6_1:+26743320 | None:intergenic |
| CAAAGAGAGTTCAAACTTCA+AGG | 0.427492 | 6_1:+26745726 | None:intergenic |
| CAACCTCGCAGGATTATAAC+TGG | 0.428629 | 6_1:-26745426 | Msa0880220:intron |
| AGTACACTTCTAGGAAAGAT+AGG | 0.429709 | 6_1:+26742838 | None:intergenic |
| AAATCCCTGCATGTGAAAGC+TGG | 0.432388 | 6_1:+26742869 | None:intergenic |
| TATATATTTGCCTAGGAAGC+AGG | 0.435093 | 6_1:+26742993 | None:intergenic |
| GGATGAGGAGGACGAGGAAG+AGG | 0.435631 | 6_1:-26745914 | Msa0880220:CDS |
| TCGATTGCTAGTTATGTTCA+TGG | 0.437145 | 6_1:-26746114 | Msa0880220:CDS |
| ACACGCTAGTCCTGCTTCCT+AGG | 0.437326 | 6_1:-26743003 | Msa0880220:three_prime_UTR |
| ATACATGGATCTTCACCCTT+GGG | 0.437950 | 6_1:+26745111 | None:intergenic |
| TGTTGCTATCTTTGTCATCA+GGG | 0.440012 | 6_1:+26745170 | None:intergenic |
| TGCATGGTGCAGGTGATTGC+TGG | 0.441426 | 6_1:-26743651 | Msa0880220:intron |
| AGAATGGTGAAGGTTGAATT+GGG | 0.442438 | 6_1:+26747173 | None:intergenic |
| GTGCGAGCTTCAGTTGCAAT+GGG | 0.443311 | 6_1:-26744810 | Msa0880220:CDS |
| AAGGTTCGTCGGGAGCGTCT+TGG | 0.443705 | 6_1:+26746886 | None:intergenic |
| AGGAAGTAAGGGATAACATA+AGG | 0.447398 | 6_1:+26747112 | None:intergenic |
| CACTGATACCAAAGGTTGCT+GGG | 0.448175 | 6_1:-26743328 | Msa0880220:CDS |
| ATTACAGTGGCATGTAAGCC+AGG | 0.448898 | 6_1:+26743048 | None:intergenic |
| AGCTTCAATTTCGGATTTGG+CGG | 0.454097 | 6_1:+26746761 | None:intergenic |
| CATGGCTCTTATTGGGATAA+CGG | 0.454105 | 6_1:-26746217 | Msa0880220:CDS |
| TACTCCCAGCTTTCACATGC+AGG | 0.454876 | 6_1:-26742874 | Msa0880220:three_prime_UTR |
| TTGTAAGGCTTTGGTTATTG+TGG | 0.454945 | 6_1:-26746301 | Msa0880220:CDS |
| GAATTGAAGAAGGAAGTGTT+TGG | 0.456028 | 6_1:+26747145 | None:intergenic |
| CAGAATTCACAGTGAGTTCA+CGG | 0.458201 | 6_1:+26746685 | None:intergenic |
| AATTTGTTTGTGTGTTGTGT+TGG | 0.460206 | 6_1:-26746423 | Msa0880220:CDS |
| AGCGTCTTGGGAGTCGGCGA+TGG | 0.463001 | 6_1:+26746899 | None:intergenic |
| CCGTCGGGTGCGATGGCGGA+GGG | 0.463995 | 6_1:+26747080 | None:intergenic |
| TAAAAGTATGTATGAAGCGA+TGG | 0.466444 | 6_1:-26746160 | Msa0880220:CDS |
| ACAACTTTCCTATGCCGCTC+AGG | 0.466784 | 6_1:+26745850 | None:intergenic |
| CACTTCTAGGAAAGATAGGC+TGG | 0.467392 | 6_1:+26742842 | None:intergenic |
| CAGGAGCATCGGAATCAATC+TGG | 0.467992 | 6_1:-26743210 | Msa0880220:three_prime_UTR |
| GAGCGCGGTCGGCTTGGAGT+TGG | 0.470195 | 6_1:+26746973 | None:intergenic |
| AATTGAAGAAGGAAGTGTTT+GGG | 0.472045 | 6_1:+26747146 | None:intergenic |
| TCTTCGCGCGGATTGGCTCA+GGG | 0.472077 | 6_1:-26745985 | Msa0880220:CDS |
| GAAACGAACAAAGGCGCACT+TGG | 0.476109 | 6_1:+26745814 | None:intergenic |
| GGAGGGCGGAGAGGAAGTAA+GGG | 0.477130 | 6_1:+26747101 | None:intergenic |
| GGCAGTTGGCATTGCTGTTG+GGG | 0.477281 | 6_1:-26745604 | Msa0880220:intron |
| ATGAAGTAGGTCAAAAGAAA+CGG | 0.477936 | 6_1:-26743264 | Msa0880220:exon |
| TCCGTCGGGTGCGATGGCGG+AGG | 0.478458 | 6_1:+26747079 | None:intergenic |
| TTGCTGTGGTGAGGACGAAA+GGG | 0.479403 | 6_1:-26745202 | Msa0880220:CDS |
| CGGGCCTTTCGGTTATGATA+GGG | 0.479425 | 6_1:-26743244 | Msa0880220:three_prime_UTR |
| CGATTGCTAGTTATGTTCAT+GGG | 0.481862 | 6_1:-26746113 | Msa0880220:CDS |
| TACTATCCTCCTCTTTCAAA+TGG | 0.483577 | 6_1:-26744870 | Msa0880220:CDS |
| GCCTTTCTTTGCAGGAGCAT+CGG | 0.485689 | 6_1:-26743221 | Msa0880220:three_prime_UTR |
| TCCAACGCAAATGTCACAAC+AGG | 0.486132 | 6_1:+26745772 | None:intergenic |
| CATAAAGTTATACATGGCGT+TGG | 0.486715 | 6_1:+26742914 | None:intergenic |
| TCCGATGCTCCTGCAAAGAA+AGG | 0.486942 | 6_1:+26743220 | None:intergenic |
| CGGGTGCGATGGCGGAGGGA+GGG | 0.487167 | 6_1:+26747084 | None:intergenic |
| TGAAGTAGGTCAAAAGAAAC+GGG | 0.487177 | 6_1:-26743263 | Msa0880220:exon |
| GACGGGAAGGGAATTGAAGA+AGG | 0.487522 | 6_1:+26747135 | None:intergenic |
| TCGGGTGCGATGGCGGAGGG+AGG | 0.487907 | 6_1:+26747083 | None:intergenic |
| TCGATGACCGAGAAGAGTGC+AGG | 0.490095 | 6_1:-26743581 | Msa0880220:CDS |
| GTCGGGAGCGTCTTGGGAGT+CGG | 0.495128 | 6_1:+26746893 | None:intergenic |
| TGGTGGATCCTGAGCGGCAT+AGG | 0.495152 | 6_1:-26745858 | Msa0880220:CDS |
| CTCCTCTTTCAAATGGTCAC+AGG | 0.497529 | 6_1:-26744863 | Msa0880220:CDS |
| TTCACGAAGGCGAGCGCGGT+CGG | 0.499086 | 6_1:+26746962 | None:intergenic |
| GTTGCTGTGGTGAGGACGAA+AGG | 0.503031 | 6_1:-26745203 | Msa0880220:CDS |
| GGCGATGGCGGCGAGGTAAG+TGG | 0.503512 | 6_1:+26746914 | None:intergenic |
| TTGCAATTTATGTTGGACTC+TGG | 0.504247 | 6_1:+26743151 | None:intergenic |
| AAGCGATGGGTTTACGTACC+GGG | 0.504543 | 6_1:-26746146 | Msa0880220:CDS |
| TTTGTTTGAGACACAGGTGT+TGG | 0.506074 | 6_1:-26745707 | Msa0880220:CDS |
| AGTAATCTAGACAAGGCATC+AGG | 0.506209 | 6_1:+26745468 | None:intergenic |
| CCCTCTAACAATATCCTCCA+AGG | 0.511090 | 6_1:+26745578 | None:intergenic |
| ATTTCTCATAAAGTTATACA+TGG | 0.511601 | 6_1:+26742908 | None:intergenic |
| CCTACTTCATTTGTGTACTC+AGG | 0.512817 | 6_1:+26743277 | None:intergenic |
| ATCAGTGGCGGAAGGTTCGT+CGG | 0.513622 | 6_1:+26746875 | None:intergenic |
| CATACATGGATCTTCACCCT+TGG | 0.516195 | 6_1:+26745110 | None:intergenic |
| TGTTCATGGGGATAATCAGT+TGG | 0.516920 | 6_1:-26746100 | Msa0880220:CDS |
| TTCGCCGAATAAATCGTCTT+CGG | 0.522535 | 6_1:+26746848 | None:intergenic |
| GTCTTGGGAGTCGGCGATGG+CGG | 0.523882 | 6_1:+26746902 | None:intergenic |
| GTGTTGGTTAATACACCTGC+TGG | 0.525818 | 6_1:-26745691 | Msa0880220:CDS |
| TGTGCGAGCTTCAGTTGCAA+TGG | 0.526133 | 6_1:-26744811 | Msa0880220:CDS |
| TCAGTGGCGGAAGGTTCGTC+GGG | 0.527370 | 6_1:+26746876 | None:intergenic |
| GGGATACTGGAAATTTCGTC+CGG | 0.527829 | 6_1:-26745670 | Msa0880220:intron |
| ACTCTCTTTGTTTGAGACAC+AGG | 0.527870 | 6_1:-26745713 | Msa0880220:CDS |
| GTTGACGAGCTTCATCAAGC+TGG | 0.530037 | 6_1:-26743543 | Msa0880220:CDS |
| GAATCTTCGCCTACTTCGGG+TGG | 0.530608 | 6_1:+26747026 | None:intergenic |
| ATGGAAGTTGCAATTTATGT+TGG | 0.531347 | 6_1:+26743144 | None:intergenic |
| AAGTGTGGAAGAGTAACAAA+TGG | 0.536759 | 6_1:+26747218 | None:intergenic |
| ATGTCACAACAGGAACTTCA+GGG | 0.545053 | 6_1:+26745782 | None:intergenic |
| ATATGTTGGCTGGGGTAGGA+TGG | 0.546203 | 6_1:-26744929 | Msa0880220:CDS |
| AAGAGGTTGATGCAGTTCCT+GGG | 0.546388 | 6_1:-26745551 | Msa0880220:CDS |
| AATCCCTGCATGTGAAAGCT+GGG | 0.547200 | 6_1:+26742870 | None:intergenic |
| GGATAACATAAGGGACGGGA+AGG | 0.548029 | 6_1:+26747122 | None:intergenic |
| GCTTCAATTTCGGATTTGGC+GGG | 0.551169 | 6_1:+26746762 | None:intergenic |
| GGGTCATAGTGGACTATGCT+CGG | 0.551938 | 6_1:-26745494 | Msa0880220:CDS |
| GGAAGTAAGGGATAACATAA+GGG | 0.552033 | 6_1:+26747113 | None:intergenic |
| CTTCGCGCGGATTGGCTCAG+GGG | 0.552284 | 6_1:-26745984 | Msa0880220:CDS |
| CGGGTGGGTCGTCGTCAGCT+GGG | 0.552775 | 6_1:+26747042 | None:intergenic |
| AAAAGTATGTATGAAGCGAT+GGG | 0.554179 | 6_1:-26746159 | Msa0880220:CDS |
| TACGAATTTGATGGATGAGG+AGG | 0.554797 | 6_1:-26745926 | Msa0880220:CDS |
| GAAGCGATGGGTTTACGTAC+CGG | 0.555215 | 6_1:-26746147 | Msa0880220:CDS |
| TCCTGTTGTGACATTTGCGT+TGG | 0.555371 | 6_1:-26745773 | Msa0880220:CDS |
| GGAATCAATCTGGTGAAGAT+GGG | 0.556201 | 6_1:-26743200 | Msa0880220:three_prime_UTR |
| CCTTGGAGGATATTGTTAGA+GGG | 0.557443 | 6_1:-26745578 | Msa0880220:CDS |
| ACTATCAAAATCTAAATCAA+AGG | 0.561397 | 6_1:+26746605 | None:intergenic |
| TAAGAGAGCTTCAACCTCGC+AGG | 0.561657 | 6_1:-26745437 | Msa0880220:CDS |
| TCAATTAACTCACACCTCCC+AGG | 0.561944 | 6_1:+26745534 | None:intergenic |
| CAGCTACCCTCCTAATGTCA+TGG | 0.562556 | 6_1:+26744832 | None:intergenic |
| ATCGTCTTCGGCGGAATCAG+TGG | 0.564284 | 6_1:+26746860 | None:intergenic |
| ACAAGCATTTGGGGTCATAG+TGG | 0.564472 | 6_1:-26745505 | Msa0880220:CDS |
| TCAGTTGGATTCGTCTTATG+GGG | 0.564527 | 6_1:-26746085 | Msa0880220:CDS |
| ATGGCGGAGGGAGGGCGGAG+AGG | 0.565355 | 6_1:+26747092 | None:intergenic |
| GTGAATTCTGATGAATCTCA+AGG | 0.565712 | 6_1:-26746672 | Msa0880220:CDS |
| TTTGAAGTGATTGGTTGCTG+TGG | 0.568006 | 6_1:-26745216 | Msa0880220:intron |
| GGGCCTTTCGGTTATGATAG+GGG | 0.568070 | 6_1:-26743243 | Msa0880220:three_prime_UTR |
| AAATGCTGTTCTTGCTACGT+TGG | 0.568754 | 6_1:-26746271 | Msa0880220:CDS |
| GTTGTAGGAGAAATGAAGTG+TGG | 0.569223 | 6_1:+26747203 | None:intergenic |
| CGTAAAGAGTTCGTTAAGCA+AGG | 0.569603 | 6_1:-26746801 | Msa0880220:CDS |
| GTGCAGGTGATTGCTGGTAA+AGG | 0.573284 | 6_1:-26743645 | Msa0880220:intron |
| CTTCTTCACGAAGGCGAGCG+CGG | 0.574199 | 6_1:+26746958 | None:intergenic |
| CTGAACTTGTCCAATCAAGC+AGG | 0.575216 | 6_1:-26742946 | Msa0880220:three_prime_UTR |
| GTTGCTATCTTTGTCATCAG+GGG | 0.577328 | 6_1:+26745171 | None:intergenic |
| GGAAGAGGATAGAGATGCGA+AGG | 0.577527 | 6_1:-26745899 | Msa0880220:CDS |
| CCCTCCGCCATCGCACCCGA+CGG | 0.579629 | 6_1:-26747080 | Msa0880220:CDS |
| CCTGAGTACACAAATGAAGT+AGG | 0.583539 | 6_1:-26743277 | Msa0880220:exon |
| TATTGTTAGAGGGATTGAAG+AGG | 0.584456 | 6_1:-26745568 | Msa0880220:CDS |
| CCAGCAACCTTTGGTATCAG+TGG | 0.584490 | 6_1:+26743329 | None:intergenic |
| CGATGACCGAGAAGAGTGCA+GGG | 0.586317 | 6_1:-26743580 | Msa0880220:CDS |
| AAAGAGAGTTCAAACTTCAA+GGG | 0.587138 | 6_1:+26745727 | None:intergenic |
| AATCTTCGCCTACTTCGGGT+GGG | 0.589280 | 6_1:+26747027 | None:intergenic |
| GACGATATGTTGGCTGGGGT+AGG | 0.590280 | 6_1:-26744933 | Msa0880220:CDS |
| TTTGATGGATGAGGAGGACG+AGG | 0.591487 | 6_1:-26745920 | Msa0880220:CDS |
| AGCCTGTGACCATTTGAAAG+AGG | 0.592989 | 6_1:+26744861 | None:intergenic |
| GGGGTTGTCGGATGTCAGCA+TGG | 0.593109 | 6_1:+26745131 | None:intergenic |
| GTAGGCGAAGATTCCGCTCA+CGG | 0.594034 | 6_1:-26747017 | Msa0880220:CDS |
| CGCCTTTGTTCGTTTCAATG+GGG | 0.598646 | 6_1:-26745807 | Msa0880220:CDS |
| TTACAGTGGCATGTAAGCCA+GGG | 0.599521 | 6_1:+26743049 | None:intergenic |
| GCGAGCTTCAGTTGCAATGG+GGG | 0.600223 | 6_1:-26744808 | Msa0880220:CDS |
| TTGAGTGAGGCTGATAAGAG+AGG | 0.600487 | 6_1:-26746375 | Msa0880220:CDS |
| TAAGGGATAACATAAGGGAC+GGG | 0.600743 | 6_1:+26747118 | None:intergenic |
| GAAATTTCCAGTATCCCAGC+AGG | 0.601448 | 6_1:+26745676 | None:intergenic |
| TGAAATCTTCTTCTTCACGA+AGG | 0.601474 | 6_1:+26746949 | None:intergenic |
| TACATGGATCTTCACCCTTG+GGG | 0.602061 | 6_1:+26745112 | None:intergenic |
| TGACGAGGAACAAGCATTTG+GGG | 0.607098 | 6_1:-26745514 | Msa0880220:CDS |
| CTCCCCATTGAAACGAACAA+AGG | 0.607522 | 6_1:+26745805 | None:intergenic |
| TTGGATAAAAGCGTACTGCA+TGG | 0.607669 | 6_1:+26743125 | None:intergenic |
| ACTCCCAGCTTTCACATGCA+GGG | 0.608356 | 6_1:-26742873 | Msa0880220:three_prime_UTR |
| GACGACGACCCACCCGAAGT+AGG | 0.608809 | 6_1:-26747035 | Msa0880220:CDS |
| TTTGGACGATATGTTGGCTG+GGG | 0.620608 | 6_1:-26744937 | Msa0880220:CDS |
| AGCAATCGAGTTAAACATCC+CGG | 0.622878 | 6_1:+26746128 | None:intergenic |
| CTGTGACCATTTGAAAGAGG+AGG | 0.627307 | 6_1:+26744864 | None:intergenic |
| TCGGCGGAATCAGTGGCGGA+AGG | 0.627428 | 6_1:+26746867 | None:intergenic |
| AGTGATTGGTTGCTGTGGTG+AGG | 0.627564 | 6_1:-26745211 | Msa0880220:CDS |
| GTAAGGGATAACATAAGGGA+CGG | 0.628474 | 6_1:+26747117 | None:intergenic |
| GATAACATAAGGGACGGGAA+GGG | 0.629765 | 6_1:+26747123 | None:intergenic |
| CCTCTAACAATATCCTCCAA+GGG | 0.631799 | 6_1:+26745579 | None:intergenic |
| TGCGAGCTTCAGTTGCAATG+GGG | 0.637029 | 6_1:-26744809 | Msa0880220:CDS |
| GGGAGTCGGCGATGGCGGCG+AGG | 0.639860 | 6_1:+26746907 | None:intergenic |
| GCTGTGGTGAGGACGAAAGG+GGG | 0.640166 | 6_1:-26745200 | Msa0880220:CDS |
| TCATAATGGAACTGAATCTG+TGG | 0.641742 | 6_1:-26746019 | Msa0880220:CDS |
| GCCGAATAAATCGTCTTCGG+CGG | 0.645356 | 6_1:+26746851 | None:intergenic |
| GATTGCTAGTTATGTTCATG+GGG | 0.647011 | 6_1:-26746112 | Msa0880220:CDS |
| TGTTGGTTAATACACCTGCT+GGG | 0.653292 | 6_1:-26745690 | Msa0880220:CDS |
| GTATTTGGTGAAGCCGTGAG+CGG | 0.654753 | 6_1:+26747004 | None:intergenic |
| GTCTTCGGCGGAATCAGTGG+CGG | 0.659797 | 6_1:+26746863 | None:intergenic |
| TGCTGTGGTGAGGACGAAAG+GGG | 0.660888 | 6_1:-26745201 | Msa0880220:CDS |
| GGCTCAGGGGAAATATGATG+AGG | 0.665665 | 6_1:-26745971 | Msa0880220:CDS |
| CAAGGATGGTGGATCCTGAG+CGG | 0.668101 | 6_1:-26745864 | Msa0880220:CDS |
| GCTGACATCCGACAACCCCA+AGG | 0.672170 | 6_1:-26745127 | Msa0880220:CDS |
| TACAGTGGCATGTAAGCCAG+GGG | 0.673609 | 6_1:+26743050 | None:intergenic |
| CAGAGAGCCACTGATACCAA+AGG | 0.673622 | 6_1:-26743336 | Msa0880220:CDS |
| AGGCCCCTATCATAACCGAA+AGG | 0.683015 | 6_1:+26743240 | None:intergenic |
| ACACAGAATTACAATTACAG+TGG | 0.694053 | 6_1:+26743035 | None:intergenic |
| CTGACATCCGACAACCCCAA+GGG | 0.697527 | 6_1:-26745126 | Msa0880220:CDS |
| AGAATCAAGTAATCTAGACA+AGG | 0.699983 | 6_1:+26745461 | None:intergenic |
| AGGTTGATGCAGTTCCTGGG+AGG | 0.713356 | 6_1:-26745548 | Msa0880220:CDS |
| TGGCTCTTATTGGGATAACG+GGG | 0.726754 | 6_1:-26746215 | Msa0880220:CDS |
| ATACCAGTTATAATCCTGCG+AGG | 0.748233 | 6_1:+26745423 | None:intergenic |
| TGACCGAGAAGAGTGCAGGG+AGG | 0.749733 | 6_1:-26743577 | Msa0880220:CDS |
| GAGGTGTGAGTTAATTGACG+AGG | 0.756211 | 6_1:-26745529 | Msa0880220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | - | chr6_1:26746213-26746232 | Msa0880220:CDS | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTT+GGG | - | chr6_1:26746213-26746232 | Msa0880220:CDS | 0.0% |
| !!! | ATTTAGATTTTGATAGTTTA+GGG | - | chr6_1:26743437-26743456 | Msa0880220:intron | 15.0% |
| !! | TGAAATTCTGAATATTTATA+GGG | + | chr6_1:26745425-26745444 | None:intergenic | 15.0% |
| !! | ATGAAATTCTGAATATTTAT+AGG | + | chr6_1:26745426-26745445 | None:intergenic | 15.0% |
| !!! | AAAGTGTAATTTTATTTTGT+AGG | - | chr6_1:26745555-26745574 | Msa0880220:CDS | 15.0% |
| !!! | AAGTGTAATTTTATTTTGTA+GGG | - | chr6_1:26745556-26745575 | Msa0880220:CDS | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | - | chr6_1:26745586-26745605 | Msa0880220:CDS | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | - | chr6_1:26745587-26745606 | Msa0880220:CDS | 15.0% |
| !! | AAAAAAAAAAAAAGATGAGT+TGG | + | chr6_1:26746206-26746225 | None:intergenic | 15.0% |
| !!! | ATATTTTTATATATTTGCCT+AGG | + | chr6_1:26747053-26747072 | None:intergenic | 15.0% |
| !! | ACTATCAAAATCTAAATCAA+AGG | + | chr6_1:26743434-26743453 | None:intergenic | 20.0% |
| !!! | GATTTAGATTTTGATAGTTT+AGG | - | chr6_1:26743436-26743455 | Msa0880220:intron | 20.0% |
| !! | AATTTGGAAGTTGAAATTAA+TGG | - | chr6_1:26743556-26743575 | Msa0880220:CDS | 20.0% |
| !! | ATTGATATTGAAGATACTTT+AGG | - | chr6_1:26743712-26743731 | Msa0880220:intron | 20.0% |
| !!! | TTTTTGGGTTACTAATTATA+AGG | - | chr6_1:26744701-26744720 | Msa0880220:intron | 20.0% |
| !! | GCATAATTAATTATATCGTT+TGG | - | chr6_1:26744748-26744767 | Msa0880220:intron | 20.0% |
| !!! | GTAAAAAGTATGAAAGAATT+AGG | + | chr6_1:26745061-26745080 | None:intergenic | 20.0% |
| !!! | ACTTTTTACTTTTTATTCAG+TGG | - | chr6_1:26745072-26745091 | Msa0880220:intron | 20.0% |
| !!! | TTTTTATTCAGTGGATATTT+TGG | - | chr6_1:26745081-26745100 | Msa0880220:intron | 20.0% |
| !!! | TTGCTTAATTTAAACCATTT+TGG | - | chr6_1:26745345-26745364 | Msa0880220:intron | 20.0% |
| !! | AATAGGGTTAATTAAGTAAA+TGG | - | chr6_1:26745398-26745417 | Msa0880220:intron | 20.0% |
| !!! | TTTTACGTCAACATTTTTTT+TGG | - | chr6_1:26745495-26745514 | Msa0880220:CDS | 20.0% |
| !!! | TATTTTCCTTTAGCATTTTA+GGG | + | chr6_1:26745522-26745541 | None:intergenic | 20.0% |
| !!! | ATATTTTCCTTTAGCATTTT+AGG | + | chr6_1:26745523-26745542 | None:intergenic | 20.0% |
| !! | AACAAACATAGAATAACTAT+TGG | - | chr6_1:26745876-26745895 | Msa0880220:CDS | 20.0% |
| !! | ATATGAATAATAATTGTGGA+TGG | + | chr6_1:26745902-26745921 | None:intergenic | 20.0% |
| !! | GTGAATATGAATAATAATTG+TGG | + | chr6_1:26745906-26745925 | None:intergenic | 20.0% |
| !! | AATTATTATTCATATTCACG+TGG | - | chr6_1:26745907-26745926 | Msa0880220:CDS | 20.0% |
| !! | ATTAAATCTTACTTAGTGAA+TGG | - | chr6_1:26746111-26746130 | Msa0880220:CDS | 20.0% |
| !!! | CTTCTTGCATATTAATATTT+TGG | + | chr6_1:26746315-26746334 | None:intergenic | 20.0% |
| !! | CAAAATATTAATATGCAAGA+AGG | - | chr6_1:26746313-26746332 | Msa0880220:CDS | 20.0% |
| !!! | AAGAAGGAATTGTTTATTTT+TGG | - | chr6_1:26746329-26746348 | Msa0880220:CDS | 20.0% |
| !! | TATAGACAAAAATAAAAGGT+TGG | + | chr6_1:26746933-26746952 | None:intergenic | 20.0% |
| !! | GCTATATAGACAAAAATAAA+AGG | + | chr6_1:26746937-26746956 | None:intergenic | 20.0% |
| !! | GAAGGAAAAAAAAAAAGAAT+TGG | + | chr6_1:26746959-26746978 | None:intergenic | 20.0% |
| !! | ATTTCTCATAAAGTTATACA+TGG | + | chr6_1:26747131-26747150 | None:intergenic | 20.0% |
| ! | ATCTAAATCAAAGGAAGATT+CGG | + | chr6_1:26743425-26743444 | None:intergenic | 25.0% |
| ! | TGTATTTCTCTTAATTGATG+TGG | - | chr6_1:26744639-26744658 | Msa0880220:intron | 25.0% |
| ! | AGTTCAAAACAAAATTGAGA+AGG | + | chr6_1:26744672-26744691 | None:intergenic | 25.0% |
| !!! | TCTCAATTTTGTTTTGAACT+TGG | - | chr6_1:26744672-26744691 | Msa0880220:intron | 25.0% |
| !!! | TTGAACTTGGAGAAATTTTT+TGG | - | chr6_1:26744685-26744704 | Msa0880220:intron | 25.0% |
| !!! | TGAACTTGGAGAAATTTTTT+GGG | - | chr6_1:26744686-26744705 | Msa0880220:intron | 25.0% |
| ! | CTTCAAAAGAAGAAAAAAGA+CGG | + | chr6_1:26744807-26744826 | None:intergenic | 25.0% |
| !!! | TTTTCTTCTTTTGAAGTGAT+TGG | - | chr6_1:26744811-26744830 | Msa0880220:CDS | 25.0% |
| ! | GTTAAGACATTGTGAAATTT+GGG | + | chr6_1:26745021-26745040 | None:intergenic | 25.0% |
| ! | AGTTAAGACATTGTGAAATT+TGG | + | chr6_1:26745022-26745041 | None:intergenic | 25.0% |
| !!! | ATTTAAACCATTTTGGTTCT+TGG | - | chr6_1:26745352-26745371 | Msa0880220:intron | 25.0% |
| !! | GTTGACGTAAAATTTTTACA+GGG | + | chr6_1:26745487-26745506 | None:intergenic | 25.0% |
| !! | TGTTGACGTAAAATTTTTAC+AGG | + | chr6_1:26745488-26745507 | None:intergenic | 25.0% |
| ! | TCAAGGGTTAATTAAGTAAA+TGG | + | chr6_1:26745614-26745633 | None:intergenic | 25.0% |
| ! | CACATCTTAATATTGTTCAA+GGG | + | chr6_1:26745630-26745649 | None:intergenic | 25.0% |
| ! | ACACATCTTAATATTGTTCA+AGG | + | chr6_1:26745631-26745650 | None:intergenic | 25.0% |
| ! | TCAAAGTGATATTTCAACTA+AGG | - | chr6_1:26745652-26745671 | Msa0880220:intron | 25.0% |
| !!! | TGTTGTTGCAACTTATTTTA+GGG | + | chr6_1:26745683-26745702 | None:intergenic | 25.0% |
| !!! | TTGTTGTTGCAACTTATTTT+AGG | + | chr6_1:26745684-26745703 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr6_1:26745764-26745783 | None:intergenic | 25.0% |
| !! | TTCCATTGCTACTTAATTTA+GGG | + | chr6_1:26745795-26745814 | None:intergenic | 25.0% |
| !! | TTTCCATTGCTACTTAATTT+AGG | + | chr6_1:26745796-26745815 | None:intergenic | 25.0% |
| ! | GTTTGACGCATTTAAATTTA+AGG | + | chr6_1:26745859-26745878 | None:intergenic | 25.0% |
| ! | ATTAGGATTCCAACATTTAA+GGG | + | chr6_1:26746028-26746047 | None:intergenic | 25.0% |
| ! | TCACTAAGTAAGATTTAATG+AGG | + | chr6_1:26746110-26746129 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGGTATGAACT+TGG | - | chr6_1:26746237-26746256 | Msa0880220:CDS | 25.0% |
| ! | CTTCTATTTGATATGTTTCA+TGG | + | chr6_1:26746417-26746436 | None:intergenic | 25.0% |
| ! | CATGAAACATATCAAATAGA+AGG | - | chr6_1:26746415-26746434 | Msa0880220:CDS | 25.0% |
| !!! | TTTTGTTGTCTTTTTATGAC+TGG | - | chr6_1:26746564-26746583 | Msa0880220:CDS | 25.0% |
| !! | TACTTGAGAACAACATATTT+TGG | - | chr6_1:26747217-26747236 | Msa0880220:CDS | 25.0% |
| !! | AATTGAAGAAGGAAGTGTTT+GGG | + | chr6_1:26742893-26742912 | None:intergenic | 30.0% |
| GCTAAACTCATCTTAAACTT+AGG | + | chr6_1:26743490-26743509 | None:intergenic | 30.0% | |
| ATGGAATTCAACATGATTCT+AGG | - | chr6_1:26743575-26743594 | Msa0880220:CDS | 30.0% | |
| ! | AATTTGTTTGTGTGTTGTGT+TGG | - | chr6_1:26743613-26743632 | Msa0880220:CDS | 30.0% |
| !! | TGAAGATACTTTAGGTTGTA+AGG | - | chr6_1:26743720-26743739 | Msa0880220:intron | 30.0% |
| TAAGTATCCTTCGAAAAACA+TGG | - | chr6_1:26743801-26743820 | Msa0880220:intron | 30.0% | |
| ! | TAAAAGTATGTATGAAGCGA+TGG | - | chr6_1:26743876-26743895 | Msa0880220:intron | 30.0% |
| ! | AAAAGTATGTATGAAGCGAT+GGG | - | chr6_1:26743877-26743896 | Msa0880220:intron | 30.0% |
| !!! | TGTTTTGGTTCAGAATTTGA+TGG | - | chr6_1:26743984-26744003 | Msa0880220:intron | 30.0% |
| !!! | TGCTGTTTTTACGAATTTGA+TGG | - | chr6_1:26744101-26744120 | Msa0880220:intron | 30.0% |
| !! | TTTTACGAATTTGATGGATG+AGG | - | chr6_1:26744107-26744126 | Msa0880220:intron | 30.0% |
| AAAGAGAGTTCAAACTTCAA+GGG | + | chr6_1:26744312-26744331 | None:intergenic | 30.0% | |
| AGAATCAAGTAATCTAGACA+AGG | + | chr6_1:26744578-26744597 | None:intergenic | 30.0% | |
| TTTCTCTTAATTGATGTGGA+AGG | - | chr6_1:26744643-26744662 | Msa0880220:intron | 30.0% | |
| AAAAGAAGAAAAAAGACGGT+CGG | + | chr6_1:26744803-26744822 | None:intergenic | 30.0% | |
| CCAATGTCAAAATACATACA+TGG | + | chr6_1:26744943-26744962 | None:intergenic | 30.0% | |
| !!! | CCATGTATGTATTTTGACAT+TGG | - | chr6_1:26744940-26744959 | Msa0880220:CDS | 30.0% |
| TTCGTATATTGCTCTTAACA+AGG | + | chr6_1:26744980-26744999 | None:intergenic | 30.0% | |
| !! | ATGCAAGAGTATCTGAAATA+TGG | - | chr6_1:26745133-26745152 | Msa0880220:CDS | 30.0% |
| AGAAATACCAAGAACCAAAA+TGG | + | chr6_1:26745362-26745381 | None:intergenic | 30.0% | |
| ! | TGCTGACGAAAATTTTTACA+GGG | + | chr6_1:26745456-26745475 | None:intergenic | 30.0% |
| ! | ATGCTGACGAAAATTTTTAC+AGG | + | chr6_1:26745457-26745476 | None:intergenic | 30.0% |
| ATGCTAAAGGAAAATATCAC+AGG | - | chr6_1:26745526-26745545 | Msa0880220:CDS | 30.0% | |
| TGCTAAAGGAAAATATCACA+GGG | - | chr6_1:26745527-26745546 | Msa0880220:CDS | 30.0% | |
| CTTAATTTAGGGAAATGTGA+TGG | + | chr6_1:26745784-26745803 | None:intergenic | 30.0% | |
| TTCCCTAAATTAAGTAGCAA+TGG | - | chr6_1:26745790-26745809 | Msa0880220:CDS | 30.0% | |
| !! | TTTGTCAACAGCTTTGAATA+TGG | + | chr6_1:26745826-26745845 | None:intergenic | 30.0% |
| TTCAAAGCTGTTGACAAATT+TGG | - | chr6_1:26745828-26745847 | Msa0880220:CDS | 30.0% | |
| GATCTTATGAAGTTACAACT+TGG | - | chr6_1:26745974-26745993 | Msa0880220:CDS | 30.0% | |
| TTAGGATTCCAACATTTAAG+GGG | + | chr6_1:26746027-26746046 | None:intergenic | 30.0% | |
| GATTAGGATTCCAACATTTA+AGG | + | chr6_1:26746029-26746048 | None:intergenic | 30.0% | |
| !! | AGGATTAGTTAAAGCTTCAT+AGG | + | chr6_1:26746076-26746095 | None:intergenic | 30.0% |
| TTAATGAGGAAAAAATCGAC+AGG | + | chr6_1:26746096-26746115 | None:intergenic | 30.0% | |
| ACTAATCCCCTTAATCATTT+CGG | - | chr6_1:26746284-26746303 | Msa0880220:CDS | 30.0% | |
| ! | TGGAATGTGATTTGTCAATA+AGG | - | chr6_1:26746349-26746368 | Msa0880220:CDS | 30.0% |
| ! | GGAATGTGATTTGTCAATAA+GGG | - | chr6_1:26746350-26746369 | Msa0880220:CDS | 30.0% |
| TCAAATAGAAGGTGAGAAAA+AGG | - | chr6_1:26746426-26746445 | Msa0880220:CDS | 30.0% | |
| TAGATACAAGTGAATTTCCA+TGG | - | chr6_1:26746518-26746537 | Msa0880220:CDS | 30.0% | |
| ATGAAGTAGGTCAAAAGAAA+CGG | - | chr6_1:26746772-26746791 | Msa0880220:CDS | 30.0% | |
| ATGGAAGTTGCAATTTATGT+TGG | + | chr6_1:26746895-26746914 | None:intergenic | 30.0% | |
| ACACAGAATTACAATTACAG+TGG | + | chr6_1:26747004-26747023 | None:intergenic | 30.0% | |
| AAGTGTGGAAGAGTAACAAA+TGG | + | chr6_1:26742821-26742840 | None:intergenic | 35.0% | |
| ! | GAATTGGGTTTGATAGTTGT+AGG | + | chr6_1:26742851-26742870 | None:intergenic | 35.0% |
| AGAATGGTGAAGGTTGAATT+GGG | + | chr6_1:26742866-26742885 | None:intergenic | 35.0% | |
| TAGAATGGTGAAGGTTGAAT+TGG | + | chr6_1:26742867-26742886 | None:intergenic | 35.0% | |
| !!! | TTTGGGTTTTAGAATGGTGA+AGG | + | chr6_1:26742876-26742895 | None:intergenic | 35.0% |
| !!! | GAAGTGTTTGGGTTTTAGAA+TGG | + | chr6_1:26742882-26742901 | None:intergenic | 35.0% |
| !! | GAATTGAAGAAGGAAGTGTT+TGG | + | chr6_1:26742894-26742913 | None:intergenic | 35.0% |
| GGAAGTAAGGGATAACATAA+GGG | + | chr6_1:26742926-26742945 | None:intergenic | 35.0% | |
| AGGAAGTAAGGGATAACATA+AGG | + | chr6_1:26742927-26742946 | None:intergenic | 35.0% | |
| ! | TTTGGATAGAATTTTCCGTC+GGG | + | chr6_1:26742974-26742993 | None:intergenic | 35.0% |
| ! | GTTTGGATAGAATTTTCCGT+CGG | + | chr6_1:26742975-26742994 | None:intergenic | 35.0% |
| !! | GAGTTGGATTTGTTGGTATT+TGG | + | chr6_1:26743050-26743069 | None:intergenic | 35.0% |
| TGAAATCTTCTTCTTCACGA+AGG | + | chr6_1:26743090-26743109 | None:intergenic | 35.0% | |
| AACAGCTTCAATTTCGGATT+TGG | + | chr6_1:26743281-26743300 | None:intergenic | 35.0% | |
| CTCTTCAACAGCTTCAATTT+CGG | + | chr6_1:26743287-26743306 | None:intergenic | 35.0% | |
| GTGAATTCTGATGAATCTCA+AGG | - | chr6_1:26743364-26743383 | Msa0880220:intron | 35.0% | |
| !! | CAAGGAGATTTTGAAGAAGA+TGG | - | chr6_1:26743382-26743401 | Msa0880220:intron | 35.0% |
| TGTGTTGGAAGAAAAAACGA+TGG | - | chr6_1:26743628-26743647 | Msa0880220:CDS | 35.0% | |
| !!! | TGGACATATGTTTTTGAGTG+AGG | - | chr6_1:26743648-26743667 | Msa0880220:intron | 35.0% |
| !! | TACTTTAGGTTGTAAGGCTT+TGG | - | chr6_1:26743726-26743745 | Msa0880220:intron | 35.0% |
| ! | TTGTAAGGCTTTGGTTATTG+TGG | - | chr6_1:26743735-26743754 | Msa0880220:intron | 35.0% |
| !! | ATAAGAGCCATGTTTTTCGA+AGG | + | chr6_1:26743811-26743830 | None:intergenic | 35.0% |
| TCGAAAAACATGGCTCTTAT+TGG | - | chr6_1:26743811-26743830 | Msa0880220:intron | 35.0% | |
| CGAAAAACATGGCTCTTATT+GGG | - | chr6_1:26743812-26743831 | Msa0880220:intron | 35.0% | |
| TCGATTGCTAGTTATGTTCA+TGG | - | chr6_1:26743922-26743941 | Msa0880220:intron | 35.0% | |
| CGATTGCTAGTTATGTTCAT+GGG | - | chr6_1:26743923-26743942 | Msa0880220:intron | 35.0% | |
| GATTGCTAGTTATGTTCATG+GGG | - | chr6_1:26743924-26743943 | Msa0880220:intron | 35.0% | |
| AATCAGTTGGATTCGTCTTA+TGG | - | chr6_1:26743949-26743968 | Msa0880220:intron | 35.0% | |
| ATCAGTTGGATTCGTCTTAT+GGG | - | chr6_1:26743950-26743969 | Msa0880220:intron | 35.0% | |
| ATGGCTAAGATGCTTCATAA+TGG | - | chr6_1:26744003-26744022 | Msa0880220:intron | 35.0% | |
| ! | TCATAATGGAACTGAATCTG+TGG | - | chr6_1:26744017-26744036 | Msa0880220:intron | 35.0% |
| ! | AACTGAATCTGTGGTTTTTG+AGG | - | chr6_1:26744026-26744045 | Msa0880220:intron | 35.0% |
| CAAAGAGAGTTCAAACTTCA+AGG | + | chr6_1:26744313-26744332 | None:intergenic | 35.0% | |
| ! | AAATTTCGTCCGGTTTTACT+AGG | - | chr6_1:26744376-26744395 | Msa0880220:intron | 35.0% |
| TATTGTTAGAGGGATTGAAG+AGG | - | chr6_1:26744468-26744487 | Msa0880220:intron | 35.0% | |
| TGTTGCTATCTTTGTCATCA+GGG | + | chr6_1:26744869-26744888 | None:intergenic | 35.0% | |
| TTCACAATGTCTTAACTAGC+AGG | - | chr6_1:26745025-26745044 | Msa0880220:intron | 35.0% | |
| TCACAATGTCTTAACTAGCA+GGG | - | chr6_1:26745026-26745045 | Msa0880220:intron | 35.0% | |
| !! | GGATATTTTGGACGATATGT+TGG | - | chr6_1:26745093-26745112 | Msa0880220:intron | 35.0% |
| TACTATCCTCCTCTTTCAAA+TGG | - | chr6_1:26745166-26745185 | Msa0880220:CDS | 35.0% | |
| ! | TTTTTCTCCATGACATTAGG+AGG | - | chr6_1:26745197-26745216 | Msa0880220:CDS | 35.0% |
| ! | TTTTCTCCATGACATTAGGA+GGG | - | chr6_1:26745198-26745217 | Msa0880220:CDS | 35.0% |
| ! | TTGGTTCTTGGTATTTCTTG+TGG | - | chr6_1:26745364-26745383 | Msa0880220:intron | 35.0% |
| TTGTGGAAAAGCTGAACAAT+AGG | - | chr6_1:26745381-26745400 | Msa0880220:intron | 35.0% | |
| TGTGGAAAAGCTGAACAATA+GGG | - | chr6_1:26745382-26745401 | Msa0880220:intron | 35.0% | |
| TTTGGTCCCTAAAATGCTAA+AGG | - | chr6_1:26745513-26745532 | Msa0880220:CDS | 35.0% | |
| CTACTTAAACGAGACAGATT+AGG | + | chr6_1:26746045-26746064 | None:intergenic | 35.0% | |
| TTAAAGCTTCATAGGAAGCA+AGG | + | chr6_1:26746068-26746087 | None:intergenic | 35.0% | |
| GTGATTCCGAAATGATTAAG+GGG | + | chr6_1:26746293-26746312 | None:intergenic | 35.0% | |
| GGTGATTCCGAAATGATTAA+GGG | + | chr6_1:26746294-26746313 | None:intergenic | 35.0% | |
| TGGTGATTCCGAAATGATTA+AGG | + | chr6_1:26746295-26746314 | None:intergenic | 35.0% | |
| ATACAAGTGAATTTCCATGG+CGG | - | chr6_1:26746521-26746540 | Msa0880220:CDS | 35.0% | |
| ! | TTGTCTTTTTATGACTGGCA+TGG | - | chr6_1:26746569-26746588 | Msa0880220:CDS | 35.0% |
| TCTCTTGCATTTATTGTTGC+AGG | - | chr6_1:26746673-26746692 | Msa0880220:CDS | 35.0% | |
| TGAAGTAGGTCAAAAGAAAC+GGG | - | chr6_1:26746773-26746792 | Msa0880220:CDS | 35.0% | |
| TTGCAATTTATGTTGGACTC+TGG | + | chr6_1:26746888-26746907 | None:intergenic | 35.0% | |
| TATATATTTGCCTAGGAAGC+AGG | + | chr6_1:26747046-26747065 | None:intergenic | 35.0% | |
| CATAAAGTTATACATGGCGT+TGG | + | chr6_1:26747125-26747144 | None:intergenic | 35.0% | |
| ! | AGTACACTTCTAGGAAAGAT+AGG | + | chr6_1:26747201-26747220 | None:intergenic | 35.0% |
| TTGTTCTCAAGTACACTTCT+AGG | + | chr6_1:26747210-26747229 | None:intergenic | 35.0% | |
| GTTGTAGGAGAAATGAAGTG+TGG | + | chr6_1:26742836-26742855 | None:intergenic | 40.0% | |
| TAAGGGATAACATAAGGGAC+GGG | + | chr6_1:26742921-26742940 | None:intergenic | 40.0% | |
| GTAAGGGATAACATAAGGGA+CGG | + | chr6_1:26742922-26742941 | None:intergenic | 40.0% | |
| TTCGCCGAATAAATCGTCTT+CGG | + | chr6_1:26743191-26743210 | None:intergenic | 40.0% | |
| CGTAAAGAGTTCGTTAAGCA+AGG | - | chr6_1:26743235-26743254 | Msa0880220:three_prime_UTR | 40.0% | |
| AGCTTCAATTTCGGATTTGG+CGG | + | chr6_1:26743278-26743297 | None:intergenic | 40.0% | |
| CAGAATTCACAGTGAGTTCA+CGG | + | chr6_1:26743354-26743373 | None:intergenic | 40.0% | |
| ! | GATGAGTTTAGCTGAGCTTT+TGG | - | chr6_1:26743498-26743517 | Msa0880220:intron | 40.0% |
| ! | GCTTTTGGATGAGAGTAAAG+TGG | - | chr6_1:26743513-26743532 | Msa0880220:intron | 40.0% |
| GAGTAAAGTGGTTCCTGTTT+CGG | - | chr6_1:26743525-26743544 | Msa0880220:intron | 40.0% | |
| AAATTCCCGTAAACCGAAAC+AGG | + | chr6_1:26743541-26743560 | None:intergenic | 40.0% | |
| TGTTTCGGTTTACGGGAATT+TGG | - | chr6_1:26743540-26743559 | Msa0880220:CDS | 40.0% | |
| !! | GATTCTAGGCTTGTTACTTC+TGG | - | chr6_1:26743589-26743608 | Msa0880220:CDS | 40.0% |
| AAATGCTGTTCTTGCTACGT+TGG | - | chr6_1:26743765-26743784 | Msa0880220:intron | 40.0% | |
| CATGGCTCTTATTGGGATAA+CGG | - | chr6_1:26743819-26743838 | Msa0880220:intron | 40.0% | |
| ATGGCTCTTATTGGGATAAC+GGG | - | chr6_1:26743820-26743839 | Msa0880220:intron | 40.0% | |
| AGCAATCGAGTTAAACATCC+CGG | + | chr6_1:26743911-26743930 | None:intergenic | 40.0% | |
| TGTTCATGGGGATAATCAGT+TGG | - | chr6_1:26743936-26743955 | Msa0880220:intron | 40.0% | |
| TCAGTTGGATTCGTCTTATG+GGG | - | chr6_1:26743951-26743970 | Msa0880220:intron | 40.0% | |
| ! | TACGAATTTGATGGATGAGG+AGG | - | chr6_1:26744110-26744129 | Msa0880220:intron | 40.0% |
| !! | TAAGCTGTTTTCAAGGATGG+TGG | - | chr6_1:26744161-26744180 | Msa0880220:intron | 40.0% |
| ATGTCACAACAGGAACTTCA+GGG | + | chr6_1:26744257-26744276 | None:intergenic | 40.0% | |
| AATGTCACAACAGGAACTTC+AGG | + | chr6_1:26744258-26744277 | None:intergenic | 40.0% | |
| ! | ACTCTCTTTGTTTGAGACAC+AGG | - | chr6_1:26744323-26744342 | Msa0880220:intron | 40.0% |
| ! | TTTGTTTGAGACACAGGTGT+TGG | - | chr6_1:26744329-26744348 | Msa0880220:intron | 40.0% |
| ! | TGTTGGTTAATACACCTGCT+GGG | - | chr6_1:26744346-26744365 | Msa0880220:intron | 40.0% |
| TTGTGCCTTCCTAGTAAAAC+CGG | + | chr6_1:26744388-26744407 | None:intergenic | 40.0% | |
| TTACAACATTCTTGCTGCTG+TGG | - | chr6_1:26744411-26744430 | Msa0880220:intron | 40.0% | |
| CCTCTAACAATATCCTCCAA+GGG | + | chr6_1:26744460-26744479 | None:intergenic | 40.0% | |
| CCTTGGAGGATATTGTTAGA+GGG | - | chr6_1:26744458-26744477 | Msa0880220:intron | 40.0% | |
| ATTGACGAGGAACAAGCATT+TGG | - | chr6_1:26744520-26744539 | Msa0880220:intron | 40.0% | |
| TTGACGAGGAACAAGCATTT+GGG | - | chr6_1:26744521-26744540 | Msa0880220:intron | 40.0% | |
| ! | AGTAATCTAGACAAGGCATC+AGG | + | chr6_1:26744571-26744590 | None:intergenic | 40.0% |
| ATACCAGTTATAATCCTGCG+AGG | + | chr6_1:26744616-26744635 | None:intergenic | 40.0% | |
| ! | TTTGAAGTGATTGGTTGCTG+TGG | - | chr6_1:26744820-26744839 | Msa0880220:CDS | 40.0% |
| GTTGCTATCTTTGTCATCAG+GGG | + | chr6_1:26744868-26744887 | None:intergenic | 40.0% | |
| CTGTTGCTATCTTTGTCATC+AGG | + | chr6_1:26744870-26744889 | None:intergenic | 40.0% | |
| ATACATGGATCTTCACCCTT+GGG | + | chr6_1:26744928-26744947 | None:intergenic | 40.0% | |
| ! | ATTTTGGACGATATGTTGGC+TGG | - | chr6_1:26745097-26745116 | Msa0880220:intron | 40.0% |
| !! | TTTTGGACGATATGTTGGCT+GGG | - | chr6_1:26745098-26745117 | Msa0880220:intron | 40.0% |
| !! | GGCTTTTTCTCCATGACATT+AGG | - | chr6_1:26745194-26745213 | Msa0880220:CDS | 40.0% |
| TCATCCATGAAACTGAACGT+TGG | + | chr6_1:26745945-26745964 | None:intergenic | 40.0% | |
| ! | TCCAACATTTAAGGGGTACA+GGG | + | chr6_1:26746020-26746039 | None:intergenic | 40.0% |
| ! | TTCCAACATTTAAGGGGTAC+AGG | + | chr6_1:26746021-26746040 | None:intergenic | 40.0% |
| TTTGACTGTCAGTCTACACT+TGG | - | chr6_1:26746179-26746198 | Msa0880220:CDS | 40.0% | |
| ! | AGGGTACACTTTTATGTGCA+TGG | - | chr6_1:26746369-26746388 | Msa0880220:CDS | 40.0% |
| AACATTTGACATTACCGCCA+TGG | + | chr6_1:26746538-26746557 | None:intergenic | 40.0% | |
| ATTTGTGTACTCAGGTGAAC+AGG | + | chr6_1:26746754-26746773 | None:intergenic | 40.0% | |
| CCTACTTCATTTGTGTACTC+AGG | + | chr6_1:26746762-26746781 | None:intergenic | 40.0% | |
| CCTGAGTACACAAATGAAGT+AGG | - | chr6_1:26746759-26746778 | Msa0880220:CDS | 40.0% | |
| GGAATCAATCTGGTGAAGAT+GGG | - | chr6_1:26746836-26746855 | Msa0880220:CDS | 40.0% | |
| ! | TTGGATAAAAGCGTACTGCA+TGG | + | chr6_1:26746914-26746933 | None:intergenic | 40.0% |
| ! | TTTTCCTTCCTTTTTTCCCC+TGG | - | chr6_1:26746970-26746989 | Msa0880220:CDS | 40.0% |
| GATAATCTAGCCTGCTTGAT+TGG | + | chr6_1:26747103-26747122 | None:intergenic | 40.0% | |
| GATAACATAAGGGACGGGAA+GGG | + | chr6_1:26742916-26742935 | None:intergenic | 45.0% | |
| TCCGCCGAAGACGATTTATT+CGG | - | chr6_1:26743184-26743203 | Msa0880220:three_prime_UTR | 45.0% | |
| ATTTCGGATTTGGCGGGATT+AGG | + | chr6_1:26743271-26743290 | None:intergenic | 45.0% | |
| GCTTCAATTTCGGATTTGGC+GGG | + | chr6_1:26743277-26743296 | None:intergenic | 45.0% | |
| !! | TCTACATCGTCGACTTCATC+AGG | + | chr6_1:26743316-26743335 | None:intergenic | 45.0% |
| GTGGTTCCTGTTTCGGTTTA+CGG | - | chr6_1:26743532-26743551 | Msa0880220:CDS | 45.0% | |
| TGGTTCCTGTTTCGGTTTAC+GGG | - | chr6_1:26743533-26743552 | Msa0880220:CDS | 45.0% | |
| TTGAGTGAGGCTGATAAGAG+AGG | - | chr6_1:26743661-26743680 | Msa0880220:intron | 45.0% | |
| TGGCTCTTATTGGGATAACG+GGG | - | chr6_1:26743821-26743840 | Msa0880220:intron | 45.0% | |
| !! | ATTGGGATAACGGGGACTTA+TGG | - | chr6_1:26743829-26743848 | Msa0880220:intron | 45.0% |
| !! | CGAAGGCTAAGCTGTTTTCA+AGG | - | chr6_1:26744154-26744173 | Msa0880220:intron | 45.0% |
| !! | GGCTAAGCTGTTTTCAAGGA+TGG | - | chr6_1:26744158-26744177 | Msa0880220:intron | 45.0% |
| TGCGCCTTTGTTCGTTTCAA+TGG | - | chr6_1:26744227-26744246 | Msa0880220:intron | 45.0% | |
| GCGCCTTTGTTCGTTTCAAT+GGG | - | chr6_1:26744228-26744247 | Msa0880220:intron | 45.0% | |
| CGCCTTTGTTCGTTTCAATG+GGG | - | chr6_1:26744229-26744248 | Msa0880220:intron | 45.0% | |
| CTCCCCATTGAAACGAACAA+AGG | + | chr6_1:26744234-26744253 | None:intergenic | 45.0% | |
| TCCTGTTGTGACATTTGCGT+TGG | - | chr6_1:26744263-26744282 | Msa0880220:intron | 45.0% | |
| TCCAACGCAAATGTCACAAC+AGG | + | chr6_1:26744267-26744286 | None:intergenic | 45.0% | |
| !! | GTGTTGGTTAATACACCTGC+TGG | - | chr6_1:26744345-26744364 | Msa0880220:intron | 45.0% |
| TAATACACCTGCTGGGATAC+TGG | - | chr6_1:26744353-26744372 | Msa0880220:intron | 45.0% | |
| GAAATTTCCAGTATCCCAGC+AGG | + | chr6_1:26744363-26744382 | None:intergenic | 45.0% | |
| GGGATACTGGAAATTTCGTC+CGG | - | chr6_1:26744366-26744385 | Msa0880220:intron | 45.0% | |
| ! | TTCGTCCGGTTTTACTAGGA+AGG | - | chr6_1:26744380-26744399 | Msa0880220:intron | 45.0% |
| CCCTTGGAGGATATTGTTAG+AGG | - | chr6_1:26744457-26744476 | Msa0880220:intron | 45.0% | |
| CCCTCTAACAATATCCTCCA+AGG | + | chr6_1:26744461-26744480 | None:intergenic | 45.0% | |
| !! | AAGAGGTTGATGCAGTTCCT+GGG | - | chr6_1:26744485-26744504 | Msa0880220:intron | 45.0% |
| TCAATTAACTCACACCTCCC+AGG | + | chr6_1:26744505-26744524 | None:intergenic | 45.0% | |
| GAGGTGTGAGTTAATTGACG+AGG | - | chr6_1:26744507-26744526 | Msa0880220:intron | 45.0% | |
| TGACGAGGAACAAGCATTTG+GGG | - | chr6_1:26744522-26744541 | Msa0880220:intron | 45.0% | |
| ! | ACAAGCATTTGGGGTCATAG+TGG | - | chr6_1:26744531-26744550 | Msa0880220:intron | 45.0% |
| CAACCTCGCAGGATTATAAC+TGG | - | chr6_1:26744610-26744629 | Msa0880220:intron | 45.0% | |
| TACATGGATCTTCACCCTTG+GGG | + | chr6_1:26744927-26744946 | None:intergenic | 45.0% | |
| CATACATGGATCTTCACCCT+TGG | + | chr6_1:26744929-26744948 | None:intergenic | 45.0% | |
| ! | TTTGGACGATATGTTGGCTG+GGG | - | chr6_1:26745099-26745118 | Msa0880220:intron | 45.0% |
| CTGTGACCATTTGAAAGAGG+AGG | + | chr6_1:26745175-26745194 | None:intergenic | 45.0% | |
| CTCCTCTTTCAAATGGTCAC+AGG | - | chr6_1:26745173-26745192 | Msa0880220:CDS | 45.0% | |
| AGCCTGTGACCATTTGAAAG+AGG | + | chr6_1:26745178-26745197 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr6_1:26745714-26745733 | Msa0880220:CDS | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr6_1:26745715-26745734 | Msa0880220:CDS | 45.0% |
| TCCACCAACGTTCAGTTTCA+TGG | - | chr6_1:26745938-26745957 | Msa0880220:CDS | 45.0% | |
| TCCATGAAACTGAACGTTGG+TGG | + | chr6_1:26745942-26745961 | None:intergenic | 45.0% | |
| ACAGGGAAGTCAGCTTATCA+TGG | + | chr6_1:26746003-26746022 | None:intergenic | 45.0% | |
| TCCCTGTACCCCTTAAATGT+TGG | - | chr6_1:26746016-26746035 | Msa0880220:CDS | 45.0% | |
| ! | CACTTTTATGTGCATGGTGC+AGG | - | chr6_1:26746375-26746394 | Msa0880220:CDS | 45.0% |
| CACTGATACCAAAGGTTGCT+GGG | - | chr6_1:26746708-26746727 | Msa0880220:CDS | 45.0% | |
| ATTGTTAGCCCAGCAACCTT+TGG | + | chr6_1:26746719-26746738 | None:intergenic | 45.0% | |
| GTCAAAAGAAACGGGCCTTT+CGG | - | chr6_1:26746781-26746800 | Msa0880220:CDS | 45.0% | |
| CGGAATCAATCTGGTGAAGA+TGG | - | chr6_1:26746835-26746854 | Msa0880220:CDS | 45.0% | |
| TAAGCCAGGGGAAAAAAGGA+AGG | + | chr6_1:26746977-26746996 | None:intergenic | 45.0% | |
| CATGTAAGCCAGGGGAAAAA+AGG | + | chr6_1:26746981-26747000 | None:intergenic | 45.0% | |
| TTACAGTGGCATGTAAGCCA+GGG | + | chr6_1:26746990-26747009 | None:intergenic | 45.0% | |
| ATTACAGTGGCATGTAAGCC+AGG | + | chr6_1:26746991-26747010 | None:intergenic | 45.0% | |
| CTGAACTTGTCCAATCAAGC+AGG | - | chr6_1:26747090-26747109 | Msa0880220:CDS | 45.0% | |
| AATCCCTGCATGTGAAAGCT+GGG | + | chr6_1:26747169-26747188 | None:intergenic | 45.0% | |
| AAATCCCTGCATGTGAAAGC+TGG | + | chr6_1:26747170-26747189 | None:intergenic | 45.0% | |
| ! | CACTTCTAGGAAAGATAGGC+TGG | + | chr6_1:26747197-26747216 | None:intergenic | 45.0% |
| GACGGGAAGGGAATTGAAGA+AGG | + | chr6_1:26742904-26742923 | None:intergenic | 50.0% | |
| GGATAACATAAGGGACGGGA+AGG | + | chr6_1:26742917-26742936 | None:intergenic | 50.0% | |
| AATCTTCGCCTACTTCGGGT+GGG | + | chr6_1:26743012-26743031 | None:intergenic | 50.0% | |
| AGCGGAATCTTCGCCTACTT+CGG | + | chr6_1:26743017-26743036 | None:intergenic | 50.0% | |
| ! | GTATTTGGTGAAGCCGTGAG+CGG | + | chr6_1:26743035-26743054 | None:intergenic | 50.0% |
| ! | CGGCTTGGAGTTGGATTTGT+TGG | + | chr6_1:26743057-26743076 | None:intergenic | 50.0% |
| GCCGAATAAATCGTCTTCGG+CGG | + | chr6_1:26743188-26743207 | None:intergenic | 50.0% | |
| ! | GAAGCGATGGGTTTACGTAC+CGG | - | chr6_1:26743889-26743908 | Msa0880220:intron | 50.0% |
| ! | AAGCGATGGGTTTACGTACC+GGG | - | chr6_1:26743890-26743909 | Msa0880220:intron | 50.0% |
| GGATTCGTCTTATGGGGTTC+TGG | - | chr6_1:26743957-26743976 | Msa0880220:intron | 50.0% | |
| !!! | TGGGGTTCTGGATGCTGTTT+TGG | - | chr6_1:26743969-26743988 | Msa0880220:intron | 50.0% |
| !!! | GTTTTTGAGGCTTCTTCGCG+CGG | - | chr6_1:26744039-26744058 | Msa0880220:intron | 50.0% |
| GGCTCAGGGGAAATATGATG+AGG | - | chr6_1:26744065-26744084 | Msa0880220:intron | 50.0% | |
| ! | TTTGATGGATGAGGAGGACG+AGG | - | chr6_1:26744116-26744135 | Msa0880220:intron | 50.0% |
| GGAAGAGGATAGAGATGCGA+AGG | - | chr6_1:26744137-26744156 | Msa0880220:intron | 50.0% | |
| ACAACTTTCCTATGCCGCTC+AGG | + | chr6_1:26744189-26744208 | None:intergenic | 50.0% | |
| ! | GAAACGAACAAAGGCGCACT+TGG | + | chr6_1:26744225-26744244 | None:intergenic | 50.0% |
| ATTCTTGCTGCTGTGGCAGT+TGG | - | chr6_1:26744418-26744437 | Msa0880220:intron | 50.0% | |
| ! | TGGCAGTTGGCATTGCTGTT+GGG | - | chr6_1:26744431-26744450 | Msa0880220:intron | 50.0% |
| !! | GAAGAGGTTGATGCAGTTCC+TGG | - | chr6_1:26744484-26744503 | Msa0880220:intron | 50.0% |
| !! | GGGTCATAGTGGACTATGCT+CGG | - | chr6_1:26744542-26744561 | Msa0880220:intron | 50.0% |
| TAAGAGAGCTTCAACCTCGC+AGG | - | chr6_1:26744599-26744618 | Msa0880220:intron | 50.0% | |
| ! | AGTGATTGGTTGCTGTGGTG+AGG | - | chr6_1:26744825-26744844 | Msa0880220:CDS | 50.0% |
| TTGCTGTGGTGAGGACGAAA+GGG | - | chr6_1:26744834-26744853 | Msa0880220:CDS | 50.0% | |
| ATCTTCACCCTTGGGGTTGT+CGG | + | chr6_1:26744920-26744939 | None:intergenic | 50.0% | |
| ! | ATATGTTGGCTGGGGTAGGA+TGG | - | chr6_1:26745107-26745126 | Msa0880220:intron | 50.0% |
| CAGCTACCCTCCTAATGTCA+TGG | + | chr6_1:26745207-26745226 | None:intergenic | 50.0% | |
| TGTGCGAGCTTCAGTTGCAA+TGG | - | chr6_1:26745225-26745244 | Msa0880220:intron | 50.0% | |
| GTGCGAGCTTCAGTTGCAAT+GGG | - | chr6_1:26745226-26745245 | Msa0880220:intron | 50.0% | |
| TGCGAGCTTCAGTTGCAATG+GGG | - | chr6_1:26745227-26745246 | Msa0880220:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr6_1:26745716-26745735 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr6_1:26745713-26745732 | Msa0880220:CDS | 50.0% |
| TGACCCCACTTAGTGGGATA+AGG | + | chr6_1:26745721-26745740 | None:intergenic | 50.0% | |
| TGAAGCTGACCCCACTTAGT+GGG | + | chr6_1:26745727-26745746 | None:intergenic | 50.0% | |
| ATGAAGCTGACCCCACTTAG+TGG | + | chr6_1:26745728-26745747 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTTCA+TGG | - | chr6_1:26745727-26745746 | Msa0880220:CDS | 50.0% | |
| GTGCAGGTGATTGCTGGTAA+AGG | - | chr6_1:26746391-26746410 | Msa0880220:CDS | 50.0% | |
| GTTGACGAGCTTCATCAAGC+TGG | - | chr6_1:26746493-26746512 | Msa0880220:CDS | 50.0% | |
| CTTTGGTATCAGTGGCTCTC+TGG | + | chr6_1:26746702-26746721 | None:intergenic | 50.0% | |
| CAGAGAGCCACTGATACCAA+AGG | - | chr6_1:26746700-26746719 | Msa0880220:CDS | 50.0% | |
| CCAGCAACCTTTGGTATCAG+TGG | + | chr6_1:26746710-26746729 | None:intergenic | 50.0% | |
| CCACTGATACCAAAGGTTGC+TGG | - | chr6_1:26746707-26746726 | Msa0880220:CDS | 50.0% | |
| ACGGGCCTTTCGGTTATGAT+AGG | - | chr6_1:26746791-26746810 | Msa0880220:CDS | 50.0% | |
| CGGGCCTTTCGGTTATGATA+GGG | - | chr6_1:26746792-26746811 | Msa0880220:CDS | 50.0% | |
| GGGCCTTTCGGTTATGATAG+GGG | - | chr6_1:26746793-26746812 | Msa0880220:CDS | 50.0% | |
| AGGCCCCTATCATAACCGAA+AGG | + | chr6_1:26746799-26746818 | None:intergenic | 50.0% | |
| TGATAGGGGCCTTTCTTTGC+AGG | - | chr6_1:26746807-26746826 | Msa0880220:CDS | 50.0% | |
| ! | GCCTTTCTTTGCAGGAGCAT+CGG | - | chr6_1:26746815-26746834 | Msa0880220:CDS | 50.0% |
| TCCGATGCTCCTGCAAAGAA+AGG | + | chr6_1:26746819-26746838 | None:intergenic | 50.0% | |
| !! | CAGGAGCATCGGAATCAATC+TGG | - | chr6_1:26746826-26746845 | Msa0880220:CDS | 50.0% |
| TACAGTGGCATGTAAGCCAG+GGG | + | chr6_1:26746989-26747008 | None:intergenic | 50.0% | |
| TACTCCCAGCTTTCACATGC+AGG | - | chr6_1:26747162-26747181 | Msa0880220:CDS | 50.0% | |
| ACTCCCAGCTTTCACATGCA+GGG | - | chr6_1:26747163-26747182 | Msa0880220:CDS | 50.0% | |
| ! | GAATTTTCCGTCGGGTGCGA+TGG | + | chr6_1:26742966-26742985 | None:intergenic | 55.0% |
| GAATCTTCGCCTACTTCGGG+TGG | + | chr6_1:26743013-26743032 | None:intergenic | 55.0% | |
| GCGGAATCTTCGCCTACTTC+GGG | + | chr6_1:26743016-26743035 | None:intergenic | 55.0% | |
| GTAGGCGAAGATTCCGCTCA+CGG | - | chr6_1:26743019-26743038 | Msa0880220:three_prime_UTR | 55.0% | |
| ! | ATCAGTGGCGGAAGGTTCGT+CGG | + | chr6_1:26743164-26743183 | None:intergenic | 55.0% |
| ATCGTCTTCGGCGGAATCAG+TGG | + | chr6_1:26743179-26743198 | None:intergenic | 55.0% | |
| !! | CAAGGATGGTGGATCCTGAG+CGG | - | chr6_1:26744172-26744191 | Msa0880220:intron | 55.0% |
| GTGGCAGTTGGCATTGCTGT+TGG | - | chr6_1:26744430-26744449 | Msa0880220:intron | 55.0% | |
| ! | GGCAGTTGGCATTGCTGTTG+GGG | - | chr6_1:26744432-26744451 | Msa0880220:intron | 55.0% |
| !! | AGGTTGATGCAGTTCCTGGG+AGG | - | chr6_1:26744488-26744507 | Msa0880220:intron | 55.0% |
| GTTGCTGTGGTGAGGACGAA+AGG | - | chr6_1:26744833-26744852 | Msa0880220:CDS | 55.0% | |
| TGCTGTGGTGAGGACGAAAG+GGG | - | chr6_1:26744835-26744854 | Msa0880220:CDS | 55.0% | |
| CTGACATCCGACAACCCCAA+GGG | - | chr6_1:26744910-26744929 | Msa0880220:CDS | 55.0% | |
| ! | GACGATATGTTGGCTGGGGT+AGG | - | chr6_1:26745103-26745122 | Msa0880220:intron | 55.0% |
| GCGAGCTTCAGTTGCAATGG+GGG | - | chr6_1:26745228-26745247 | Msa0880220:intron | 55.0% | |
| AGCTTCAGTTGCAATGGGGG+AGG | - | chr6_1:26745231-26745250 | Msa0880220:intron | 55.0% | |
| TTCAGTTGCAATGGGGGAGG+AGG | - | chr6_1:26745234-26745253 | Msa0880220:intron | 55.0% | |
| TCAGTTGCAATGGGGGAGGA+GGG | - | chr6_1:26745235-26745254 | Msa0880220:intron | 55.0% | |
| GTCTCTACAGTTGCGCGCAA+AGG | + | chr6_1:26746266-26746285 | None:intergenic | 55.0% | |
| TGCATGGTGCAGGTGATTGC+TGG | - | chr6_1:26746385-26746404 | Msa0880220:CDS | 55.0% | |
| ! | TCGATGACCGAGAAGAGTGC+AGG | - | chr6_1:26746455-26746474 | Msa0880220:CDS | 55.0% |
| ! | CGATGACCGAGAAGAGTGCA+GGG | - | chr6_1:26746456-26746475 | Msa0880220:CDS | 55.0% |
| AAGCCTCCCTGCACTCTTCT+CGG | + | chr6_1:26746465-26746484 | None:intergenic | 55.0% | |
| ACACGCTAGTCCTGCTTCCT+AGG | - | chr6_1:26747033-26747052 | Msa0880220:CDS | 55.0% | |
| GGAGGGCGGAGAGGAAGTAA+GGG | + | chr6_1:26742938-26742957 | None:intergenic | 60.0% | |
| ! | TTTTCCGTCGGGTGCGATGG+CGG | + | chr6_1:26742963-26742982 | None:intergenic | 60.0% |
| CTTCTTCACGAAGGCGAGCG+CGG | + | chr6_1:26743081-26743100 | None:intergenic | 60.0% | |
| !! | AGGTTCGTCGGGAGCGTCTT+GGG | + | chr6_1:26743152-26743171 | None:intergenic | 60.0% |
| !! | AAGGTTCGTCGGGAGCGTCT+TGG | + | chr6_1:26743153-26743172 | None:intergenic | 60.0% |
| ! | TCAGTGGCGGAAGGTTCGTC+GGG | + | chr6_1:26743163-26743182 | None:intergenic | 60.0% |
| GTCTTCGGCGGAATCAGTGG+CGG | + | chr6_1:26743176-26743195 | None:intergenic | 60.0% | |
| TGAGGCTTCTTCGCGCGGAT+TGG | - | chr6_1:26744044-26744063 | Msa0880220:intron | 60.0% | |
| !! | TTCTTCGCGCGGATTGGCTC+AGG | - | chr6_1:26744050-26744069 | Msa0880220:intron | 60.0% |
| !! | TCTTCGCGCGGATTGGCTCA+GGG | - | chr6_1:26744051-26744070 | Msa0880220:intron | 60.0% |
| GGATGAGGAGGACGAGGAAG+AGG | - | chr6_1:26744122-26744141 | Msa0880220:intron | 60.0% | |
| ! | TGGTGGATCCTGAGCGGCAT+AGG | - | chr6_1:26744178-26744197 | Msa0880220:intron | 60.0% |
| ! | CATTGCTGTTGGGGCACCCT+TGG | - | chr6_1:26744441-26744460 | Msa0880220:intron | 60.0% |
| GCTGTGGTGAGGACGAAAGG+GGG | - | chr6_1:26744836-26744855 | Msa0880220:CDS | 60.0% | |
| GGGGTTGTCGGATGTCAGCA+TGG | + | chr6_1:26744908-26744927 | None:intergenic | 60.0% | |
| GCTGACATCCGACAACCCCA+AGG | - | chr6_1:26744909-26744928 | Msa0880220:CDS | 60.0% | |
| ! | TGACCGAGAAGAGTGCAGGG+AGG | - | chr6_1:26746459-26746478 | Msa0880220:CDS | 60.0% |
| GGGAGGGCGGAGAGGAAGTA+AGG | + | chr6_1:26742939-26742958 | None:intergenic | 65.0% | |
| GGGTCGTCGTCAGCTGGGTT+TGG | + | chr6_1:26742992-26743011 | None:intergenic | 65.0% | |
| GACGACGACCCACCCGAAGT+AGG | - | chr6_1:26743001-26743020 | Msa0880220:three_prime_UTR | 65.0% | |
| TTCACGAAGGCGAGCGCGGT+CGG | + | chr6_1:26743077-26743096 | None:intergenic | 65.0% | |
| GTCTTGGGAGTCGGCGATGG+CGG | + | chr6_1:26743137-26743156 | None:intergenic | 65.0% | |
| AGCGTCTTGGGAGTCGGCGA+TGG | + | chr6_1:26743140-26743159 | None:intergenic | 65.0% | |
| !! | GTCGGGAGCGTCTTGGGAGT+CGG | + | chr6_1:26743146-26743165 | None:intergenic | 65.0% |
| ! | TCGGCGGAATCAGTGGCGGA+AGG | + | chr6_1:26743172-26743191 | None:intergenic | 65.0% |
| !! | CTTCGCGCGGATTGGCTCAG+GGG | - | chr6_1:26744052-26744071 | Msa0880220:intron | 65.0% |
| ! | TGCTGTTGGGGCACCCTTGG+AGG | - | chr6_1:26744444-26744463 | Msa0880220:intron | 65.0% |
| CGGGTGGGTCGTCGTCAGCT+GGG | + | chr6_1:26742997-26743016 | None:intergenic | 70.0% | |
| TCGGGTGGGTCGTCGTCAGC+TGG | + | chr6_1:26742998-26743017 | None:intergenic | 70.0% | |
| !! | GAGCGCGGTCGGCTTGGAGT+TGG | + | chr6_1:26743066-26743085 | None:intergenic | 70.0% |
| ! | GGCGATGGCGGCGAGGTAAG+TGG | + | chr6_1:26743125-26743144 | None:intergenic | 70.0% |
| ! | ATGGCGGAGGGAGGGCGGAG+AGG | + | chr6_1:26742947-26742966 | None:intergenic | 75.0% |
| !! | GTGCGATGGCGGAGGGAGGG+CGG | + | chr6_1:26742952-26742971 | None:intergenic | 75.0% |
| !! | CGGGTGCGATGGCGGAGGGA+GGG | + | chr6_1:26742955-26742974 | None:intergenic | 75.0% |
| !! | TCGGGTGCGATGGCGGAGGG+AGG | + | chr6_1:26742956-26742975 | None:intergenic | 75.0% |
| !! | CCGTCGGGTGCGATGGCGGA+GGG | + | chr6_1:26742959-26742978 | None:intergenic | 75.0% |
| CCCTCCGCCATCGCACCCGA+CGG | - | chr6_1:26742956-26742975 | Msa0880220:three_prime_UTR | 75.0% | |
| ! | TCCGTCGGGTGCGATGGCGG+AGG | + | chr6_1:26742960-26742979 | None:intergenic | 75.0% |
| GAAGGCGAGCGCGGTCGGCT+TGG | + | chr6_1:26743072-26743091 | None:intergenic | 75.0% | |
| !! | GGGAGTCGGCGATGGCGGCG+AGG | + | chr6_1:26743132-26743151 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 26742809 | 26747249 | 26742809 | ID=Msa0880220;Name=Msa0880220 |
| chr6_1 | mRNA | 26742809 | 26747249 | 26742809 | ID=Msa0880220-mRNA-1;Parent=Msa0880220;Name=Msa0880220-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.6|0.5|1|1|1|6|469|760 |
| chr6_1 | exon | 26742809 | 26743363 | 26742809 | ID=Msa0880220-mRNA-1:exon:6481;Parent=Msa0880220-mRNA-1 |
| chr6_1 | exon | 26743532 | 26743661 | 26743532 | ID=Msa0880220-mRNA-1:exon:6480;Parent=Msa0880220-mRNA-1 |
| chr6_1 | exon | 26744791 | 26744966 | 26744791 | ID=Msa0880220-mRNA-1:exon:6479;Parent=Msa0880220-mRNA-1 |
| chr6_1 | exon | 26745115 | 26745231 | 26745115 | ID=Msa0880220-mRNA-1:exon:6478;Parent=Msa0880220-mRNA-1 |
| chr6_1 | exon | 26745427 | 26745621 | 26745427 | ID=Msa0880220-mRNA-1:exon:6477;Parent=Msa0880220-mRNA-1 |
| chr6_1 | exon | 26745671 | 26747249 | 26745671 | ID=Msa0880220-mRNA-1:exon:6476;Parent=Msa0880220-mRNA-1 |
| chr6_1 | CDS | 26745671 | 26747249 | 26745671 | ID=Msa0880220-mRNA-1:cds;Parent=Msa0880220-mRNA-1 |
| chr6_1 | CDS | 26745427 | 26745621 | 26745427 | ID=Msa0880220-mRNA-1:cds;Parent=Msa0880220-mRNA-1 |
| chr6_1 | CDS | 26745115 | 26745231 | 26745115 | ID=Msa0880220-mRNA-1:cds;Parent=Msa0880220-mRNA-1 |
| chr6_1 | CDS | 26744791 | 26744966 | 26744791 | ID=Msa0880220-mRNA-1:cds;Parent=Msa0880220-mRNA-1 |
| chr6_1 | CDS | 26743532 | 26743661 | 26743532 | ID=Msa0880220-mRNA-1:cds;Parent=Msa0880220-mRNA-1 |
| chr6_1 | CDS | 26743278 | 26743363 | 26743278 | ID=Msa0880220-mRNA-1:cds;Parent=Msa0880220-mRNA-1 |
| chr6_1 | three_prime_UTR | 26742809 | 26743277 | 26742809 | ID=Msa0880220-mRNA-1:three_prime_utr;Parent=Msa0880220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
