AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0626030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0626030 MtrunA17_Chr4g0001761 92.051 390 5 1 24 413 1 364 0.0 736
Msa0626030 MtrunA17_Chr3g0136811 70.801 387 84 3 24 407 1 361 0.0 573
Msa0626030 MtrunA17_Chr1g0150071 65.104 384 107 2 24 406 1 358 0.0 521
Msa0626030 MtrunA17_Chr4g0007811 53.371 178 33 2 63 240 54 181 4.51e-56 184
Msa0626030 MtrunA17_Chr5g0407161 41.618 173 93 4 209 380 184 349 1.73e-35 134
Msa0626030 MtrunA17_Chr1g0194191 35.484 248 130 7 166 405 140 365 4.28e-34 130
Msa0626030 MtrunA17_Chr3g0138281 37.379 206 103 4 209 412 183 364 1.12e-33 129
Msa0626030 MtrunA17_Chr4g0065141 38.636 176 104 1 204 379 181 352 1.06e-32 127
Msa0626030 MtrunA17_Chr2g0293811 41.176 170 91 3 207 375 168 329 1.43e-32 126
Msa0626030 MtrunA17_Chr5g0435721 32.899 307 133 10 46 347 192 430 1.01e-31 125
Msa0626030 MtrunA17_Chr3g0127091 28.500 400 181 13 2 374 25 346 1.96e-31 123
Msa0626030 MtrunA17_Chr3g0144111 37.870 169 98 2 209 377 66 227 2.00e-31 120
Msa0626030 MtrunA17_Chr2g0299981 31.421 366 167 14 47 378 221 536 1.35e-30 123
Msa0626030 MtrunA17_Chr3g0112291 32.343 303 134 10 46 343 92 328 1.70e-30 120
Msa0626030 MtrunA17_Chr3g0136711 36.170 188 99 4 207 390 124 294 2.07e-27 110
Msa0626030 MtrunA17_Chr1g0150451 35.632 174 92 3 207 377 167 323 4.27e-26 107
Msa0626030 MtrunA17_Chr1g0171571 28.490 351 154 14 44 383 385 649 1.30e-25 109
Msa0626030 MtrunA17_Chr2g0317021 36.932 176 86 5 209 378 177 333 2.17e-24 102
Msa0626030 MtrunA17_Chr1g0212961 36.207 174 90 5 207 377 182 337 6.75e-24 101
Msa0626030 MtrunA17_Chr3g0126511 37.791 172 87 4 209 377 186 340 9.15e-24 101
Msa0626030 MtrunA17_Chr5g0426141 37.500 176 85 6 209 378 126 282 1.28e-23 99.8
Msa0626030 MtrunA17_Chr2g0279151 37.500 176 85 6 209 378 125 281 1.40e-23 99.8
Msa0626030 MtrunA17_Chr3g0105371 36.111 180 94 6 207 379 175 340 2.64e-23 100
Msa0626030 MtrunA17_Chr3g0105351 34.078 179 99 5 207 379 151 316 2.79e-23 99.4
Msa0626030 MtrunA17_Chr3g0115851 42.857 133 59 4 209 335 126 247 2.87e-23 98.6
Msa0626030 MtrunA17_Chr4g0050381 34.091 176 91 5 209 378 121 277 5.43e-23 97.8
Msa0626030 MtrunA17_Chr5g0430481 41.985 131 63 2 209 335 213 334 6.87e-23 99.4
Msa0626030 MtrunA17_Chr6g0483411 32.620 187 97 6 209 378 145 319 2.12e-21 94.4
Msa0626030 MtrunA17_Chr3g0135961 36.170 188 91 7 209 378 364 540 2.27e-20 93.2
Msa0626030 MtrunA17_Chr4g0070871 41.221 131 65 3 208 335 324 445 3.08e-20 92.8
Msa0626030 MtrunA17_Chr4g0051661 34.857 175 89 6 209 377 242 397 4.95e-20 91.3
Msa0626030 MtrunA17_Chr8g0360351 35.429 175 88 5 209 377 126 281 7.48e-20 89.0
Msa0626030 MtrunA17_Chr1g0150781 41.481 135 67 4 209 340 368 493 1.34e-19 90.9
Msa0626030 MtrunA17_Chr5g0396731 38.462 143 76 2 202 341 170 303 3.11e-19 88.6
Msa0626030 MtrunA17_Chr8g0389921 32.778 180 103 4 209 379 266 436 1.37e-17 84.3
Msa0626030 MtrunA17_Chr4g0068971 45.161 93 48 1 249 341 110 199 2.85e-17 81.3
Msa0626030 MtrunA17_Chr1g0158781 34.518 197 101 5 202 383 202 385 2.68e-15 77.0
Msa0626030 MtrunA17_Chr7g0249421 35.616 146 68 4 209 336 207 344 7.29e-15 76.3
Msa0626030 MtrunA17_Chr1g0181901 30.058 173 89 6 191 336 130 297 1.91e-14 74.7
Msa0626030 MtrunA17_Chr8g0371321 27.935 247 132 6 208 412 146 388 8.00e-14 72.8
Msa0626030 MtrunA17_Chr1g0207571 31.677 161 76 5 207 336 127 284 1.07e-13 72.0
Msa0626030 MtrunA17_Chr7g0221691 34.194 155 76 4 200 336 223 369 1.83e-13 71.6
Msa0626030 MtrunA17_Chr7g0256771 28.571 168 95 4 209 351 139 306 2.37e-13 70.5
Msa0626030 MtrunA17_Chr1g0192421 33.121 157 76 5 209 347 173 318 2.63e-13 70.9
Msa0626030 MtrunA17_Chr3g0089721 21.835 316 146 10 75 362 68 310 2.74e-13 70.9
Msa0626030 MtrunA17_Chr3g0089711 21.835 316 146 10 75 362 68 310 2.96e-13 70.9
Msa0626030 MtrunA17_Chr2g0295401 30.323 155 82 4 200 336 167 313 4.28e-13 70.1
Msa0626030 MtrunA17_Chr4g0067711 29.677 155 83 4 200 336 166 312 7.39e-13 69.3
Msa0626030 MtrunA17_Chr1g0213351 30.508 177 85 6 191 337 134 302 8.15e-13 69.3
Msa0626030 MtrunA17_Chr1g0209451 27.602 221 114 7 205 409 128 318 1.69e-12 68.6
Msa0626030 MtrunA17_Chr1g0151781 32.414 145 73 4 209 336 152 288 2.13e-12 67.8
Msa0626030 MtrunA17_Chr2g0286951 30.097 206 112 7 209 386 149 350 2.18e-12 68.2
Msa0626030 MtrunA17_Chr7g0250061 26.257 179 100 6 184 336 125 297 2.33e-12 68.2
Msa0626030 MtrunA17_Chr7g0256751 27.368 190 106 6 208 370 137 321 2.34e-12 68.2
Msa0626030 MtrunA17_Chr7g0272061 27.273 198 110 6 209 384 183 368 2.97e-12 67.8
Msa0626030 MtrunA17_Chr2g0324061 33.562 146 71 4 209 336 186 323 4.20e-12 67.8
Msa0626030 MtrunA17_Chr7g0243571 31.034 145 75 4 209 336 188 324 1.81e-11 65.5
Msa0626030 MtrunA17_Chr2g0294291 27.119 177 91 5 191 337 130 298 1.93e-11 65.1
Msa0626030 MtrunA17_Chr1g0211251 27.326 172 95 4 191 336 135 302 2.87e-11 64.7
Msa0626030 MtrunA17_Chr3g0089691 25.532 188 101 7 206 362 45 224 4.62e-11 63.5
Msa0626030 MtrunA17_Chr1g0175381 27.673 159 90 4 209 342 147 305 8.36e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0626030 AT4G31860.1 71.774 372 76 3 24 394 1 344 0.0 555
Msa0626030 AT2G25070.1 68.548 372 86 3 24 394 1 342 0.0 536
Msa0626030 AT2G25070.2 68.548 372 86 3 24 394 1 342 0.0 536
Msa0626030 AT4G31860.3 72.100 319 63 1 24 342 1 293 5.01e-172 483
Msa0626030 AT4G31860.2 71.761 301 59 1 24 324 1 275 3.00e-160 452
Msa0626030 AT1G07430.1 33.660 306 119 11 46 337 120 355 3.77e-34 132
Msa0626030 AT2G33700.1 42.012 169 91 2 209 377 183 344 3.01e-33 129
Msa0626030 AT2G25620.1 40.237 169 95 2 209 375 190 354 7.10e-33 128
Msa0626030 AT2G25620.2 40.237 169 95 2 209 375 190 354 7.10e-33 128
Msa0626030 AT1G48040.1 41.011 178 89 4 207 379 185 351 1.25e-31 124
Msa0626030 AT3G51470.1 28.479 309 195 7 72 377 42 327 1.26e-31 124
Msa0626030 AT3G51470.2 38.462 169 97 2 209 377 122 283 1.76e-31 122
Msa0626030 AT3G62260.3 40.462 173 93 4 207 377 95 259 4.33e-31 120
Msa0626030 AT3G62260.2 40.462 173 93 4 207 377 185 349 1.21e-30 121
Msa0626030 AT3G62260.1 40.462 173 93 4 207 377 184 348 1.30e-30 121
Msa0626030 AT5G51760.2 30.194 361 168 12 47 379 79 383 6.88e-30 119
Msa0626030 AT5G51760.1 30.194 361 168 12 47 379 109 413 1.15e-29 119
Msa0626030 AT3G17250.1 37.079 178 98 3 207 379 227 395 8.21e-29 117
Msa0626030 AT5G53140.1 34.673 199 110 4 209 404 193 374 1.14e-27 114
Msa0626030 AT5G53140.2 34.673 199 110 4 209 404 193 374 1.14e-27 114
Msa0626030 AT5G10740.1 36.782 174 90 3 207 377 123 279 1.62e-27 112
Msa0626030 AT5G10740.2 36.782 174 90 3 207 377 123 279 1.62e-27 112
Msa0626030 AT1G17550.1 30.449 312 140 8 47 335 189 446 5.75e-27 113
Msa0626030 AT1G17550.2 30.449 312 140 8 47 335 189 446 5.75e-27 113
Msa0626030 AT3G11410.1 31.741 293 132 9 46 330 104 336 6.01e-27 111
Msa0626030 AT4G31750.2 36.207 174 91 3 207 377 123 279 1.86e-26 108
Msa0626030 AT4G31750.1 36.207 174 91 3 207 377 123 279 2.09e-26 108
Msa0626030 AT4G31750.3 36.207 174 91 3 207 377 123 279 2.09e-26 108
Msa0626030 AT5G24940.1 31.140 228 125 5 188 412 113 311 3.63e-26 110
Msa0626030 AT1G67820.2 30.333 300 117 9 40 333 81 294 4.56e-26 109
Msa0626030 AT1G67820.1 30.333 300 117 9 40 333 117 330 5.18e-26 109
Msa0626030 AT1G43900.1 37.714 175 88 5 207 378 213 369 1.02e-25 107
Msa0626030 AT3G15260.2 37.853 177 83 7 209 378 133 289 1.03e-23 100
Msa0626030 AT3G15260.1 37.853 177 83 7 209 378 133 289 1.03e-23 100
Msa0626030 AT4G27800.2 34.911 169 86 2 209 353 160 328 2.15e-23 100
Msa0626030 AT4G27800.1 33.158 190 99 3 209 374 160 345 3.37e-23 100
Msa0626030 AT4G28400.3 43.284 134 59 4 209 336 105 227 6.99e-23 97.4
Msa0626030 AT4G28400.1 43.284 134 59 4 209 336 127 249 1.30e-22 97.4
Msa0626030 AT4G27800.3 34.940 166 84 2 209 350 160 325 1.64e-22 97.8
Msa0626030 AT5G59220.1 42.958 142 66 4 206 341 215 347 2.24e-22 98.6
Msa0626030 AT1G07160.1 35.593 177 92 6 209 377 214 376 2.61e-22 98.2
Msa0626030 AT2G40180.1 35.000 180 97 8 209 381 223 389 9.38e-22 96.7
Msa0626030 AT2G30020.1 35.795 176 94 6 209 378 231 393 1.32e-21 96.3
Msa0626030 AT2G29380.1 45.926 135 57 5 202 330 180 304 1.63e-21 95.5
Msa0626030 AT2G40860.4 36.464 181 91 8 209 383 393 555 3.44e-21 96.3
Msa0626030 AT5G57050.2 36.628 172 94 4 209 377 191 350 4.55e-21 94.7
Msa0626030 AT5G57050.1 36.628 172 94 4 209 377 231 390 5.08e-21 94.7
Msa0626030 AT2G40860.1 36.464 181 91 8 209 383 491 653 6.03e-21 95.9
Msa0626030 AT4G26080.1 40.146 137 70 3 207 340 239 366 1.53e-20 93.6
Msa0626030 AT1G72770.4 43.846 130 61 3 209 335 326 446 1.93e-20 93.6
Msa0626030 AT1G72770.1 43.846 130 61 3 209 335 326 446 1.93e-20 93.6
Msa0626030 AT1G72770.3 43.846 130 61 3 209 335 326 446 1.93e-20 93.6
Msa0626030 AT2G20630.1 40.299 134 63 4 209 336 123 245 2.16e-20 90.9
Msa0626030 AT4G28400.2 41.481 135 61 5 209 336 127 250 3.69e-20 89.7
Msa0626030 AT2G20630.2 40.299 134 63 4 209 336 123 245 3.80e-20 90.5
Msa0626030 AT2G34740.1 32.778 180 95 7 205 377 174 334 3.91e-20 91.3
Msa0626030 AT1G78200.5 40.152 132 64 4 209 334 80 202 5.53e-20 89.0
Msa0626030 AT1G78200.4 40.152 132 64 4 209 334 80 202 5.53e-20 89.0
Msa0626030 AT1G78200.1 40.152 132 64 4 209 334 125 247 1.47e-19 88.6
Msa0626030 AT1G78200.3 40.152 132 64 4 209 334 125 247 1.47e-19 88.6
Msa0626030 AT1G78200.2 40.152 132 64 4 209 334 125 247 1.47e-19 88.6
Msa0626030 AT1G18030.1 26.301 365 166 14 37 378 65 349 1.66e-19 89.7
Msa0626030 AT2G40860.2 39.130 138 70 4 209 341 491 619 5.38e-19 89.7
Msa0626030 AT1G34750.2 37.584 149 73 5 209 348 126 263 7.64e-19 86.7
Msa0626030 AT1G34750.1 37.584 149 73 5 209 348 126 263 7.64e-19 86.7
Msa0626030 AT1G34750.3 37.584 149 73 5 209 348 126 263 7.64e-19 86.7
Msa0626030 AT2G34740.3 38.583 127 60 5 205 324 170 285 4.51e-17 82.0
Msa0626030 AT2G34740.2 38.583 127 60 5 205 324 188 303 4.85e-17 82.0
Msa0626030 AT1G22280.3 36.090 133 68 4 209 335 131 252 9.94e-17 80.5
Msa0626030 AT1G22280.1 36.090 133 68 4 209 335 125 246 1.03e-16 80.5
Msa0626030 AT3G63340.12 24.672 381 207 12 77 399 114 472 3.10e-16 80.9
Msa0626030 AT3G63340.8 27.309 249 118 8 207 399 231 472 3.16e-16 81.6
Msa0626030 AT3G63340.6 27.309 249 118 8 207 399 231 472 3.35e-16 81.6
Msa0626030 AT3G63340.3 27.309 249 118 8 207 399 231 472 3.35e-16 81.6
Msa0626030 AT3G63340.10 27.309 249 118 8 207 399 231 472 3.35e-16 81.6
Msa0626030 AT3G63340.4 27.309 249 118 8 207 399 231 472 3.35e-16 81.6
Msa0626030 AT3G63340.7 27.309 249 118 8 207 399 231 472 3.49e-16 81.3
Msa0626030 AT3G63340.5 27.309 249 118 8 207 399 231 472 3.71e-16 81.3
Msa0626030 AT3G63340.1 27.309 249 118 8 207 399 231 472 3.71e-16 81.3
Msa0626030 AT5G02760.1 33.962 159 73 4 207 337 138 292 3.86e-16 79.7
Msa0626030 AT1G34750.4 40.164 122 56 4 209 324 126 236 4.05e-16 77.8
Msa0626030 AT3G16800.4 35.570 149 69 5 209 338 75 215 4.10e-16 78.2
Msa0626030 AT3G16800.6 35.570 149 69 5 209 338 75 215 4.10e-16 78.2
Msa0626030 AT3G63340.11 24.737 380 208 12 77 399 114 472 4.25e-16 80.9
Msa0626030 AT3G16800.2 35.570 149 69 5 209 338 170 310 1.18e-15 78.2
Msa0626030 AT3G16800.1 35.570 149 69 5 209 338 170 310 1.18e-15 78.2
Msa0626030 AT3G16800.3 35.570 149 69 5 209 338 170 310 1.18e-15 78.2
Msa0626030 AT1G18030.2 35.075 134 63 3 209 326 175 300 1.23e-15 77.8
Msa0626030 AT3G55050.1 26.531 294 116 11 74 337 83 306 2.13e-15 77.8
Msa0626030 AT3G55050.2 26.531 294 116 11 74 337 83 306 2.13e-15 77.8
Msa0626030 AT4G38520.2 34.615 156 76 4 207 336 147 302 5.50e-15 76.6
Msa0626030 AT4G38520.1 34.615 156 76 4 207 336 147 302 5.50e-15 76.6
Msa0626030 AT1G16220.1 30.319 188 102 6 208 374 197 376 1.50e-14 75.9
Msa0626030 AT3G63340.2 30.636 173 100 6 240 399 340 505 1.65e-14 76.3
Msa0626030 AT5G59220.2 51.190 84 35 2 206 283 215 298 2.72e-14 73.6
Msa0626030 AT1G79630.6 33.562 146 71 4 209 336 112 249 3.30e-14 74.3
Msa0626030 AT1G79630.3 33.562 146 71 4 209 336 112 249 3.30e-14 74.3
Msa0626030 AT1G79630.4 33.562 146 71 4 209 336 112 249 3.30e-14 74.3
Msa0626030 AT1G79630.5 33.562 146 71 4 209 336 112 249 3.30e-14 74.3
Msa0626030 AT1G79630.8 33.562 146 71 4 209 336 218 355 3.49e-14 74.7
Msa0626030 AT3G51370.2 30.769 156 82 3 208 337 61 216 3.66e-14 73.2
Msa0626030 AT3G02750.2 34.932 146 69 4 209 336 216 353 3.72e-14 74.3
Msa0626030 AT3G02750.1 34.932 146 69 4 209 336 216 353 3.72e-14 74.3
Msa0626030 AT1G79630.2 33.562 146 71 4 209 336 152 289 3.98e-14 74.3
Msa0626030 AT1G79630.7 33.562 146 71 4 209 336 152 289 3.98e-14 74.3
Msa0626030 AT1G79630.1 33.562 146 71 4 209 336 222 359 4.17e-14 74.3
Msa0626030 AT3G51370.1 30.968 155 81 3 208 336 146 300 5.46e-14 73.6
Msa0626030 AT3G51370.3 30.968 155 81 3 208 336 146 300 5.46e-14 73.6
Msa0626030 AT5G36250.1 33.562 146 71 4 209 336 207 344 5.76e-14 73.9
Msa0626030 AT5G26010.1 32.530 166 75 5 189 336 137 283 7.72e-14 72.4
Msa0626030 AT5G66080.2 28.571 175 95 4 191 339 32 202 2.88e-13 70.1
Msa0626030 AT5G66080.1 29.070 172 92 4 191 336 136 303 4.31e-13 70.9
Msa0626030 AT4G33920.1 25.152 330 139 15 47 342 36 291 5.63e-13 70.5
Msa0626030 AT4G03415.1 25.649 308 160 11 51 336 72 332 5.75e-13 70.9
Msa0626030 AT4G03415.3 25.649 308 160 11 51 336 72 332 5.75e-13 70.9
Msa0626030 AT4G03415.2 25.649 308 160 11 51 336 72 332 5.75e-13 70.9
Msa0626030 AT4G32950.1 32.192 146 73 5 209 336 139 276 7.02e-13 69.7
Msa0626030 AT5G27930.1 28.351 194 112 6 200 375 168 352 1.13e-12 69.3
Msa0626030 AT5G27930.2 28.351 194 112 6 200 375 168 352 1.13e-12 69.3
Msa0626030 AT3G17090.2 29.870 154 83 3 209 337 153 306 1.19e-12 68.9
Msa0626030 AT3G05640.2 30.323 155 82 4 200 336 163 309 1.48e-12 68.9
Msa0626030 AT3G05640.1 30.323 155 82 4 200 336 163 309 1.48e-12 68.9
Msa0626030 AT3G05640.3 30.323 155 82 4 200 336 163 309 1.48e-12 68.9
Msa0626030 AT3G17090.1 28.736 174 95 4 191 339 139 308 1.91e-12 68.9
Msa0626030 AT4G08260.1 31.638 177 96 9 205 379 57 210 2.14e-12 66.6
Msa0626030 AT2G40860.3 40.351 114 54 4 209 317 491 595 3.86e-12 68.6
Msa0626030 AT3G12620.2 30.573 157 83 3 207 337 149 305 4.06e-12 67.8
Msa0626030 AT3G12620.1 30.573 157 83 3 207 337 149 305 4.06e-12 67.8
Msa0626030 AT4G33920.3 30.000 170 80 6 207 342 14 178 1.70e-11 64.7
Msa0626030 AT1G72770.2 51.316 76 34 1 209 281 326 401 2.39e-11 65.5
Msa0626030 AT1G72770.5 51.316 76 34 1 209 281 326 401 2.39e-11 65.5
Msa0626030 AT4G33920.2 30.000 170 80 6 207 342 44 208 2.48e-11 64.7

Find 152 sgRNAs with CRISPR-Local

Find 560 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCATTAGCCCGCAATAT+TGG 0.223595 4_3:+5416735 None:intergenic
CTGCTAGTTCATGGGGTTCT+TGG 0.236402 4_3:-5413144 Msa0626030:three_prime_UTR
AGTCAATGGAAGTTTGAATT+TGG 0.237602 4_3:-5414772 Msa0626030:CDS
GGCAGTCTTGGGAGATAAAA+TGG 0.276597 4_3:-5417252 Msa0626030:CDS
GCATGCAGCTCATCCGTATT+TGG 0.288717 4_3:-5418525 Msa0626030:CDS
GCAGGGTTGGCGTGCTTCTA+TGG 0.291283 4_3:-5419412 Msa0626030:CDS
GACTGTTGTGCCGGAGGATT+AGG 0.330484 4_3:+5413352 None:intergenic
AAGAATTCGGTGCAATGTTA+TGG 0.331964 4_3:-5412921 Msa0626030:three_prime_UTR
CAATATTGGGTCTTTGAAAC+TGG 0.332258 4_3:+5416749 None:intergenic
TTCATTGGCTTCACTACTCC+TGG 0.341678 4_3:+5417190 None:intergenic
GAAAACTTACCGTCTTTAAC+TGG 0.345488 4_3:+5413652 None:intergenic
GTATGCTTGAGGGGTTTATA+TGG 0.348426 4_3:-5417217 Msa0626030:CDS
TTAGAAGTTTCTTAAGAATT+CGG 0.349137 4_3:-5412934 Msa0626030:three_prime_UTR
TGATAGCTTGTGATGGGATA+TGG 0.355721 4_3:-5413812 Msa0626030:intron
TCTTTCTATCACAGGAGATA+TGG 0.357251 4_3:-5414605 Msa0626030:intron
TCTCATTAGCCCGCAATATT+GGG 0.364679 4_3:+5416736 None:intergenic
TTGAATTTGGCTAGAGCAAT+TGG 0.367218 4_3:-5414759 Msa0626030:intron
CCACTCATCGGCACGTTCAT+TGG 0.368458 4_3:+5417175 None:intergenic
GTTAACAATCATGTTGTCAT+TGG 0.376165 4_3:+5413011 None:intergenic
TATTGCAAGTTCAGAATTGC+TGG 0.382514 4_3:-5416712 Msa0626030:CDS
CTATGGTTTGTCTTCCATGC+AGG 0.383404 4_3:-5419430 Msa0626030:CDS
TTGTGACAACTGCTAGTTCA+TGG 0.395051 4_3:-5413153 Msa0626030:three_prime_UTR
CACGCCGTGCTTCCACAGTT+TGG 0.396252 4_3:+5415870 None:intergenic
AAACGTTCAGCAAGCAATAC+TGG 0.404647 4_3:-5413081 Msa0626030:three_prime_UTR
GTGGAGAGAATTGGCAGTCT+TGG 0.411163 4_3:-5417264 Msa0626030:CDS
TTTCAAAGACCCAATATTGC+GGG 0.413693 4_3:-5416745 Msa0626030:CDS
GATAAAATGGAAAAGTTGTC+TGG 0.422547 4_3:-5417239 Msa0626030:CDS
AACGACAAGAATCTGAAATC+TGG 0.426961 4_3:+5413200 None:intergenic
TTGTGATTGCAGTTTGAGAT+GGG 0.431832 4_3:-5419516 Msa0626030:intron
CTTGGCTTTGTACATAAGCT+TGG 0.433363 4_3:-5413126 Msa0626030:three_prime_UTR
TGAGCATCAACAAACTGGTT+GGG 0.434508 4_3:+5412859 None:intergenic
TAGTGAGGGGAGGTGGTTCA+TGG 0.438484 4_3:-5413234 Msa0626030:three_prime_UTR
TGGAGAGAATTGGCAGTCTT+GGG 0.442455 4_3:-5417263 Msa0626030:CDS
TCTTTCTCAACCTCAAGATC+AGG 0.445083 4_3:+5414834 None:intergenic
ATCCAAGTTGGACGAGTCAA+TGG 0.447439 4_3:-5414786 Msa0626030:CDS
TTTGAACTGAATCAAGATCA+TGG 0.447964 4_3:+5413435 None:intergenic
ACAAAGAGGGTGGAGAGAAT+TGG 0.448478 4_3:-5417273 Msa0626030:CDS
AGGCATGAAGCTTATTTAGC+TGG 0.451028 4_3:-5418112 Msa0626030:CDS
TCTTACTTTGGTGTTTATGA+TGG 0.452467 4_3:-5418491 Msa0626030:CDS
CACCTGCTGGTGTAGAAACT+TGG 0.452978 4_3:+5418138 None:intergenic
TCAGCATGTTTAAAAGATCA+AGG 0.453129 4_3:+5412650 None:intergenic
GAAAAGTAAGAACCTGTCTC+TGG 0.454342 4_3:-5412983 Msa0626030:three_prime_UTR
TGTTGAGACATCGACTTCCT+TGG 0.455690 4_3:-5412536 Msa0626030:three_prime_UTR
TTGTCGTTAATCCTCAATAG+AGG 0.457238 4_3:-5413185 Msa0626030:three_prime_UTR
TTCCATTGACTCGTCCAACT+TGG 0.458711 4_3:+5414784 None:intergenic
TCACATGAGCATCAACAAAC+TGG 0.458966 4_3:+5412854 None:intergenic
ATTCTAGATGTGTGTTATCA+AGG 0.461406 4_3:-5415800 Msa0626030:CDS
ATCTTGAGGTTGAGAAAGAC+AGG 0.461799 4_3:-5414830 Msa0626030:CDS
GATTATTAGTTTCTCTCTCA+TGG 0.469191 4_3:-5412833 Msa0626030:three_prime_UTR
GACGTAGACTCGTCCAAATA+CGG 0.469206 4_3:+5418512 None:intergenic
CTTGGTGACTTGAATATGAA+TGG 0.471187 4_3:-5413108 Msa0626030:three_prime_UTR
CAGCTTGTGGACTTTATACA+TGG 0.472596 4_3:-5413675 Msa0626030:CDS
AAATTTACAATCCTCTATTG+AGG 0.472821 4_3:+5413174 None:intergenic
TGGCCCACTGAAATCAGAAT+GGG 0.475274 4_3:+5415890 None:intergenic
GCCTCTGAAGATGGTGAGAA+TGG 0.475288 4_3:-5419462 Msa0626030:CDS
AAGTTGTCTGGTATGCTTGA+GGG 0.483126 4_3:-5417227 Msa0626030:CDS
AAAGTCCACAAGCTGCTGGC+TGG 0.483577 4_3:+5413683 None:intergenic
TATGGTTTGTCTTCCATGCA+GGG 0.486339 4_3:-5419429 Msa0626030:CDS
TGTGACAACTGCTAGTTCAT+GGG 0.488219 4_3:-5413152 Msa0626030:three_prime_UTR
GTATAAAGTCCACAAGCTGC+TGG 0.490931 4_3:+5413679 None:intergenic
ACAGAGAAGGCCTCTGAAGA+TGG 0.493254 4_3:-5419471 Msa0626030:CDS
GTATTTGCCTGCTGAAAAGC+AGG 0.497554 4_3:-5414566 Msa0626030:CDS
AGGTGCTTGGCACCAACAGC+TGG 0.500799 4_3:-5413481 Msa0626030:CDS
GAGCATCAACAAACTGGTTG+GGG 0.504676 4_3:+5412860 None:intergenic
GTTGTGATTGCAGTTTGAGA+TGG 0.505429 4_3:-5419517 Msa0626030:intron
TTAATTCAAAATCAAGATTG+AGG 0.508014 4_3:+5412611 None:intergenic
TTTGGTGTTTATGATGGCCA+TGG 0.515356 4_3:-5418485 Msa0626030:CDS
AAACTTGTTGTTGCAAATGC+TGG 0.516391 4_3:-5415825 Msa0626030:CDS
GAAGCACTAGTGAGGGGAGG+TGG 0.524442 4_3:-5413241 Msa0626030:three_prime_UTR
TTTCTTGTGATAGCTTGTGA+TGG 0.525546 4_3:-5413819 Msa0626030:CDS
CTTTACAGAAATCTTTCCTA+AGG 0.526330 4_3:-5418075 Msa0626030:intron
GGCACCAACAGCTGGTGGTG+AGG 0.528139 4_3:-5413473 Msa0626030:CDS
AGGGGTTTATATGGTCTCCC+AGG 0.533536 4_3:-5417208 Msa0626030:CDS
GACGAGTCTACGTCTTACTT+TGG 0.533796 4_3:-5418503 Msa0626030:CDS
AGTGAGAGAATTTCAGACTC+AGG 0.534734 4_3:-5413294 Msa0626030:three_prime_UTR
TCAGCTTCAGACTGTTGTGC+CGG 0.534919 4_3:+5413343 None:intergenic
ATGAGCATCAACAAACTGGT+TGG 0.536510 4_3:+5412858 None:intergenic
TGCCAAGTTTCTACACCAGC+AGG 0.538545 4_3:-5418140 Msa0626030:CDS
CTTCATGCCTAAGCACCTGC+TGG 0.539299 4_3:+5418125 None:intergenic
CTGGTGTAGACACAGTTACA+TGG 0.540136 4_3:-5413062 Msa0626030:three_prime_UTR
TTCTTGTGATAGCTTGTGAT+GGG 0.540977 4_3:-5413818 Msa0626030:CDS
AGAAGCACGCCAACCCTGCA+TGG 0.542450 4_3:+5419416 None:intergenic
GGACCCCATTCTGATTTCAG+TGG 0.543541 4_3:-5415894 Msa0626030:CDS
TTGCTTGTTAATTTACTGCA+TGG 0.547968 4_3:-5412801 Msa0626030:three_prime_UTR
ATACTTACTGAAGTTACGTC+AGG 0.548117 4_3:+5414529 None:intergenic
TTGGCCCACTGAAATCAGAA+TGG 0.549848 4_3:+5415889 None:intergenic
AGTTGTCTGGTATGCTTGAG+GGG 0.553384 4_3:-5417226 Msa0626030:CDS
GCTTCAGACTGTTGTGCCGG+AGG 0.559144 4_3:+5413346 None:intergenic
ATGAATACGACTCCAGAGAC+AGG 0.560525 4_3:+5412971 None:intergenic
GTTTGTCTTCCATGCAGGGT+TGG 0.561122 4_3:-5419425 Msa0626030:CDS
TGCAATGTTATGGAAATGAC+AGG 0.561135 4_3:-5412911 Msa0626030:three_prime_UTR
CCAATGAACGTGCCGATGAG+TGG 0.561661 4_3:-5417175 Msa0626030:CDS
CTGTGGAAGCACGGCGTGTG+TGG 0.562361 4_3:-5415865 Msa0626030:CDS
AAAGACAGGATTCTAAAAGC+TGG 0.564183 4_3:-5414816 Msa0626030:CDS
GTGGGTTGAGCAGATGACTC+AGG 0.565003 4_3:+5413376 None:intergenic
GCAGGAGAATAAACTTTCTG+TGG 0.566825 4_3:-5413524 Msa0626030:intron
GACCCCATTCTGATTTCAGT+GGG 0.567392 4_3:-5415893 Msa0626030:CDS
TTCTACACCAGCAGGTGCTT+AGG 0.567651 4_3:-5418132 Msa0626030:CDS
CAATGAACGTGCCGATGAGT+GGG 0.569384 4_3:-5417174 Msa0626030:CDS
TGGGCCAAACTGTGGAAGCA+CGG 0.570368 4_3:-5415874 Msa0626030:CDS
GCTGGCGGTTTCATCCAAGT+TGG 0.572732 4_3:-5414798 Msa0626030:CDS
CATGTCCAGCCAGCAGCTTG+TGG 0.574080 4_3:-5413688 Msa0626030:CDS
GAGAATGGCATGCTTCGCTA+TGG 0.575346 4_3:-5419447 Msa0626030:CDS
GAAAGATTTCTGTAAAGATG+TGG 0.576727 4_3:+5418081 None:intergenic
GTGACAACTGCTAGTTCATG+GGG 0.579422 4_3:-5413151 Msa0626030:three_prime_UTR
AGATCACAAGCCTGATCTTG+AGG 0.579838 4_3:-5414844 Msa0626030:CDS
TGTGTTATCAAGGAAAGGCC+AGG 0.580463 4_3:-5415790 Msa0626030:intron
GAAAGTATTCGATAGGTGCT+TGG 0.581025 4_3:-5413494 Msa0626030:CDS
TATTGGGTCTTTGAAACTGG+AGG 0.581950 4_3:+5416752 None:intergenic
GAATTTCAGACTCAGGCAGA+TGG 0.583384 4_3:-5413287 Msa0626030:three_prime_UTR
TCTTTGAAACTGGAGGGTGA+TGG 0.583417 4_3:+5416759 None:intergenic
GATTTCAGTGGGCCAAACTG+TGG 0.583636 4_3:-5415882 Msa0626030:CDS
GCACCAACAGCTGGTGGTGA+GGG 0.586108 4_3:-5413472 Msa0626030:CDS
AGATGTGTGTTATCAAGGAA+AGG 0.590073 4_3:-5415795 Msa0626030:CDS
TTTGTGAGAAAGTATTCGAT+AGG 0.592208 4_3:-5413501 Msa0626030:CDS
CTCCTCAAAAGCCCACTCAT+CGG 0.592455 4_3:+5417163 None:intergenic
GTTGAGCAGATGACTCAGGC+TGG 0.596134 4_3:+5413380 None:intergenic
GCATGTTGAAGCACTAGTGA+GGG 0.596670 4_3:-5413248 Msa0626030:three_prime_UTR
TCAACCCACTCCTAATCCTC+CGG 0.600880 4_3:-5413362 Msa0626030:CDS
AGATGATGCGCGGACAAAGA+GGG 0.600892 4_3:-5417286 Msa0626030:CDS
TCATTGGCTTCACTACTCCT+GGG 0.601101 4_3:+5417191 None:intergenic
GCCATTCTCACCATCTTCAG+AGG 0.602250 4_3:+5419461 None:intergenic
CATCCCTCACCACCAGCTGT+TGG 0.612632 4_3:+5413469 None:intergenic
GAGATGATGCGCGGACAAAG+AGG 0.613113 4_3:-5417287 Msa0626030:CDS
GCGTGTGTGGCTGTCATCAG+AGG 0.615352 4_3:-5415852 Msa0626030:CDS
GACAGGATTCTAAAAGCTGG+CGG 0.616190 4_3:-5414813 Msa0626030:CDS
TGTGATTGCAGTTTGAGATG+GGG 0.619195 4_3:-5419515 Msa0626030:intron
TATACATGGCCAGTTAAAGA+CGG 0.619290 4_3:-5413661 Msa0626030:intron
GGAAGTTGACGTGTCAACAA+TGG 0.625481 4_3:+5412671 None:intergenic
GTTTCAAAGACCCAATATTG+CGG 0.627599 4_3:-5416746 Msa0626030:CDS
AGACAAGATACCAACCTCCA+TGG 0.629346 4_3:+5418468 None:intergenic
ATTGGGTCTTTGAAACTGGA+GGG 0.636434 4_3:+5416753 None:intergenic
TTGTGCCGGAGGATTAGGAG+TGG 0.636821 4_3:+5413357 None:intergenic
AGTTCAGAATTGCTGGACCA+AGG 0.641862 4_3:-5416705 Msa0626030:intron
GGAAGTCGATGTCTCAACAA+TGG 0.649265 4_3:+5412540 None:intergenic
TGATGCGCGGACAAAGAGGG+TGG 0.654390 4_3:-5417283 Msa0626030:CDS
ACAGAAGCATCTGAAGTCAG+AGG 0.654811 4_3:+5413409 None:intergenic
GAGTACCCCGAAAACAGAGA+AGG 0.656112 4_3:-5419484 Msa0626030:CDS
TAGAATCTGAAATATGACAA+TGG 0.657366 4_3:-5412750 Msa0626030:three_prime_UTR
TGCATGTTGAAGCACTAGTG+AGG 0.659778 4_3:-5413249 Msa0626030:three_prime_UTR
AATCACAATTAAATAGACCA+AGG 0.662173 4_3:+5412519 None:intergenic
AAAGTTGTCTGGTATGCTTG+AGG 0.662387 4_3:-5417228 Msa0626030:CDS
GGTGTTTATGATGGCCATGG+AGG 0.663870 4_3:-5418482 Msa0626030:intron
AGCATCAACAAACTGGTTGG+GGG 0.670249 4_3:+5412861 None:intergenic
TTGACGTGTCAACAATGGTG+AGG 0.677465 4_3:+5412676 None:intergenic
TCGATGTCTCAACAATGGTG+AGG 0.684595 4_3:+5412545 None:intergenic
TGTGCCGGAGGATTAGGAGT+GGG 0.688253 4_3:+5413358 None:intergenic
GTTGAAGCACTAGTGAGGGG+AGG 0.689214 4_3:-5413244 Msa0626030:three_prime_UTR
TGCTTGGCACCAACAGCTGG+TGG 0.691349 4_3:-5413478 Msa0626030:CDS
CATGTTGAAGCACTAGTGAG+GGG 0.695207 4_3:-5413247 Msa0626030:three_prime_UTR
AGAATGGATGAGATGATGCG+CGG 0.696418 4_3:-5417296 Msa0626030:CDS
GGCCCACTGAAATCAGAATG+GGG 0.698325 4_3:+5415891 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATTATTTCTAAACAA+CGG - chr4_3:5412910-5412929 Msa0626030:three_prime_UTR 10.0%
!!! ACTAGATTTTATATAATAAT+GGG + chr4_3:5414481-5414500 None:intergenic 10.0%
!!! TACTAGATTTTATATAATAA+TGG + chr4_3:5414482-5414501 None:intergenic 10.0%
!! ATTTGAGTAAAAAAAAAAAT+AGG + chr4_3:5415345-5415364 None:intergenic 10.0%
!! ATAATAAAGAACAATATTTA+AGG - chr4_3:5415381-5415400 Msa0626030:intron 10.0%
!! TAATAAAGAACAATATTTAA+GGG - chr4_3:5415382-5415401 Msa0626030:intron 10.0%
!! ATTAATATTATCATTTACAA+TGG + chr4_3:5416620-5416639 None:intergenic 10.0%
!!! TTGAAATTATTCTTTTTTAA+GGG - chr4_3:5418914-5418933 Msa0626030:intron 10.0%
!!! ATTTTAATTAAAAACATGTT+TGG + chr4_3:5418985-5419004 None:intergenic 10.0%
!!! ATTTTAGTTAAATATATGTT+TGG + chr4_3:5419040-5419059 None:intergenic 10.0%
!! TAATAAAATAGAGGAAATTA+GGG + chr4_3:5412587-5412606 None:intergenic 15.0%
!!! ATTGATTTTAACAAAATATC+TGG + chr4_3:5413308-5413327 None:intergenic 15.0%
!! TTCTAACATTTAAATTACTT+TGG - chr4_3:5414696-5414715 Msa0626030:intron 15.0%
!! TAAAACTAGATGTTAAATAT+TGG + chr4_3:5414856-5414875 None:intergenic 15.0%
!!! TAGTTTTATATTTGTCAATA+TGG - chr4_3:5414868-5414887 Msa0626030:intron 15.0%
!! AATAAAGAACAATATTTAAG+GGG - chr4_3:5415383-5415402 Msa0626030:intron 15.0%
!!! GAAAAGTATATACATAAAAA+GGG + chr4_3:5415740-5415759 None:intergenic 15.0%
!!! AGAAAAGTATATACATAAAA+AGG + chr4_3:5415741-5415760 None:intergenic 15.0%
!! ATAATTTGACATAAAGAAAA+TGG + chr4_3:5416787-5416806 None:intergenic 15.0%
!!! TGATAAAAAATTATTTCTGT+TGG - chr4_3:5418634-5418653 Msa0626030:intron 15.0%
!! ATAACTTGATTTATACTATT+TGG - chr4_3:5418664-5418683 Msa0626030:intron 15.0%
!! TAACTTGATTTATACTATTT+GGG - chr4_3:5418665-5418684 Msa0626030:intron 15.0%
!!! CAAGTTTTAACATAAATTTA+TGG + chr4_3:5418897-5418916 None:intergenic 15.0%
!!! CTTGAAATTATTCTTTTTTA+AGG - chr4_3:5418913-5418932 Msa0626030:intron 15.0%
!! GTAATAAAATAGAGGAAATT+AGG + chr4_3:5412588-5412607 None:intergenic 20.0%
!! AATGAAGAGTAATAAAATAG+AGG + chr4_3:5412596-5412615 None:intergenic 20.0%
!!! TTTTTTTTTCCTTTCCTTTT+TGG - chr4_3:5413012-5413031 Msa0626030:three_prime_UTR 20.0%
!!! AGGTAAAATGATTTATGTTT+TGG - chr4_3:5413130-5413149 Msa0626030:three_prime_UTR 20.0%
!!! TTATTCTGAAAAAGTAAAGT+GGG - chr4_3:5413833-5413852 Msa0626030:CDS 20.0%
!! TGATATATATGTCAATCTAT+AGG + chr4_3:5414069-5414088 None:intergenic 20.0%
!! TTGATTAAGAATGTTGTAAA+TGG - chr4_3:5414121-5414140 Msa0626030:intron 20.0%
!! ATCATTAATATACTACAATG+AGG - chr4_3:5414193-5414212 Msa0626030:intron 20.0%
!! AAAATGAAGACACATAAAAA+AGG + chr4_3:5415315-5415334 None:intergenic 20.0%
!!! TTTTTATGTGTCTTCATTTT+CGG - chr4_3:5415315-5415334 Msa0626030:intron 20.0%
!! CTTATATTTATTTACCTTCA+TGG - chr4_3:5415626-5415645 Msa0626030:intron 20.0%
!! CATATATTAATCTCCATAAT+AGG + chr4_3:5415690-5415709 None:intergenic 20.0%
!!! ATATACTTTTCTTCATATTG+AGG - chr4_3:5415749-5415768 Msa0626030:intron 20.0%
!! ATATTATCATTTACAATGGT+GGG + chr4_3:5416616-5416635 None:intergenic 20.0%
!! AATATTATCATTTACAATGG+TGG + chr4_3:5416617-5416636 None:intergenic 20.0%
!!! ATTTCTTTTGGTGTTTATAA+TGG - chr4_3:5416660-5416679 Msa0626030:intron 20.0%
!! TTGTAATCACTTAATCATAA+AGG + chr4_3:5417052-5417071 None:intergenic 20.0%
!! AAATAAAACCTTATACAGTA+GGG + chr4_3:5417124-5417143 None:intergenic 20.0%
!! AAAATAAAACCTTATACAGT+AGG + chr4_3:5417125-5417144 None:intergenic 20.0%
!! AAGTGTTATATTGTGAATTA+GGG - chr4_3:5417154-5417173 Msa0626030:intron 20.0%
!! AGTATAGACCTTTATATTAA+AGG - chr4_3:5417356-5417375 Msa0626030:intron 20.0%
!! AAAGGATTTGTCATTATTTA+TGG - chr4_3:5417686-5417705 Msa0626030:intron 20.0%
!!! GGTACTTTAAAAAAATACAT+GGG - chr4_3:5417898-5417917 Msa0626030:intron 20.0%
!! TTTAAAAAAATACATGGGAT+GGG - chr4_3:5417903-5417922 Msa0626030:intron 20.0%
!!! TGTTTGCTTAAATTTTTAGA+AGG - chr4_3:5418760-5418779 Msa0626030:intron 20.0%
!!! GTTTGCTTAAATTTTTAGAA+GGG - chr4_3:5418761-5418780 Msa0626030:intron 20.0%
!!! TTTGCTTAAATTTTTAGAAG+GGG - chr4_3:5418762-5418781 Msa0626030:intron 20.0%
!!! TAGTTTTGTCAATGTAATAA+TGG + chr4_3:5418873-5418892 None:intergenic 20.0%
!!! TTATTTTATTTATGTGCGAT+AGG - chr4_3:5419204-5419223 Msa0626030:intron 20.0%
!!! TTACAACCAGATTTTATAAT+TGG + chr4_3:5419502-5419521 None:intergenic 20.0%
!!! TAAGAAACTTCTAAAAATTG+TGG + chr4_3:5420129-5420148 None:intergenic 20.0%
!! TTAGAAGTTTCTTAAGAATT+CGG - chr4_3:5420135-5420154 Msa0626030:intron 20.0%
!! TTAATTCAAAATCAAGATTG+AGG + chr4_3:5420461-5420480 None:intergenic 20.0%
!! TTCTGTTTTCTGTTTCATTT+TGG - chr4_3:5412779-5412798 Msa0626030:three_prime_UTR 25.0%
! ACTACCATATATATTCTTCT+AGG + chr4_3:5412890-5412909 None:intergenic 25.0%
! TCTAAACAACGGTTATAAAT+TGG - chr4_3:5412921-5412940 Msa0626030:three_prime_UTR 25.0%
!! CTCAAAATCAATTTTTGTCA+CGG + chr4_3:5413067-5413086 None:intergenic 25.0%
!!! TGATTTTGAGTGAATTGATT+CGG - chr4_3:5413077-5413096 Msa0626030:three_prime_UTR 25.0%
!!! ATGATTTATGTTTTGGACTT+TGG - chr4_3:5413137-5413156 Msa0626030:three_prime_UTR 25.0%
!!! TGTGTTTTTTGATTAAGTGT+TGG - chr4_3:5413519-5413538 Msa0626030:CDS 25.0%
!! CTGTAACTATTCTTTTCTTT+TGG - chr4_3:5413686-5413705 Msa0626030:CDS 25.0%
!! GTTATTCTGAAAAAGTAAAG+TGG - chr4_3:5413832-5413851 Msa0626030:CDS 25.0%
!!! TAGTGTTGAGAAATTCTTTT+TGG - chr4_3:5414387-5414406 Msa0626030:intron 25.0%
!! CATTGATTATAATTCACTTG+AGG - chr4_3:5414762-5414781 Msa0626030:CDS 25.0%
! ATCATTTCAAAGTATAGTGA+TGG - chr4_3:5414816-5414835 Msa0626030:CDS 25.0%
! TCATTTCAAAGTATAGTGAT+GGG - chr4_3:5414817-5414836 Msa0626030:CDS 25.0%
! ACAAGAAACAAAATTACCTT+AGG + chr4_3:5415013-5415032 None:intergenic 25.0%
! AAGATAAATGAAAGTTCAGA+AGG + chr4_3:5415036-5415055 None:intergenic 25.0%
! TGAACTTTCATTTATCTTAC+TGG - chr4_3:5415038-5415057 Msa0626030:intron 25.0%
! GAACTTTCATTTATCTTACT+GGG - chr4_3:5415039-5415058 Msa0626030:intron 25.0%
!! TAATTTGTATCTAAGAGACA+AGG + chr4_3:5415201-5415220 None:intergenic 25.0%
!! TTTTATGTGTCTTCATTTTC+GGG - chr4_3:5415316-5415335 Msa0626030:intron 25.0%
! TGGTTTATGATAGAACTTTA+TGG + chr4_3:5415480-5415499 None:intergenic 25.0%
!! TTATAAGTTGGATCGAAATA+TGG + chr4_3:5415500-5415519 None:intergenic 25.0%
! ATATTTCGATCCAACTTATA+AGG - chr4_3:5415499-5415518 Msa0626030:intron 25.0%
! TATTTCGATCCAACTTATAA+GGG - chr4_3:5415500-5415519 Msa0626030:intron 25.0%
! ATCTTAAATCCCTTATAAGT+TGG + chr4_3:5415512-5415531 None:intergenic 25.0%
! TTTAAAGATCTGACCTATTA+TGG - chr4_3:5415674-5415693 Msa0626030:intron 25.0%
!! TACATAAAAAGGGCATAATT+TGG + chr4_3:5415730-5415749 None:intergenic 25.0%
! AGCTACTGAAAAATATTGTT+TGG + chr4_3:5416075-5416094 None:intergenic 25.0%
! TATTCTTCCTTGATTTAGAA+TGG - chr4_3:5416267-5416286 Msa0626030:intron 25.0%
! AATCATGAGTTTACAATTCT+AGG + chr4_3:5416516-5416535 None:intergenic 25.0%
! TATTATCATTTACAATGGTG+GGG + chr4_3:5416615-5416634 None:intergenic 25.0%
!!! CACATTATTGTTATTTGACA+AGG + chr4_3:5416732-5416751 None:intergenic 25.0%
! ACCTTAATTAAAAGTCAACT+CGG - chr4_3:5416991-5417010 Msa0626030:intron 25.0%
!! TGATTACAAGTACACATTTT+AGG - chr4_3:5417063-5417082 Msa0626030:intron 25.0%
!! GATTACAAGTACACATTTTA+GGG - chr4_3:5417064-5417083 Msa0626030:intron 25.0%
!!! TAAGGTTTTATTTTGAACTG+AGG - chr4_3:5417131-5417150 Msa0626030:intron 25.0%
!! GAAGTGTTATATTGTGAATT+AGG - chr4_3:5417153-5417172 Msa0626030:intron 25.0%
!! CAATCTTCTCTAATTTTAGA+AGG - chr4_3:5417328-5417347 Msa0626030:intron 25.0%
!! CGGTACTTTAAAAAAATACA+TGG - chr4_3:5417897-5417916 Msa0626030:intron 25.0%
!! CTTTAAAAAAATACATGGGA+TGG - chr4_3:5417902-5417921 Msa0626030:intron 25.0%
! AAATTATGAAATTCACGACA+GGG + chr4_3:5418098-5418117 None:intergenic 25.0%
! TAAATTATGAAATTCACGAC+AGG + chr4_3:5418099-5418118 None:intergenic 25.0%
! GCAGTATAACTTCATTAAAT+AGG + chr4_3:5418186-5418205 None:intergenic 25.0%
! ATTTAATGAAGTTATACTGC+AGG - chr4_3:5418186-5418205 Msa0626030:intron 25.0%
!!! AGCAATTGGTAATTTTTTCT+GGG - chr4_3:5418324-5418343 Msa0626030:intron 25.0%
! CAAAGAAAAATGTATGCATT+TGG - chr4_3:5418364-5418383 Msa0626030:intron 25.0%
!!! ATTCTTTTTTAAGGGCAAAA+AGG - chr4_3:5418922-5418941 Msa0626030:intron 25.0%
!! TATATGTTTGGTTCAAAAGA+GGG + chr4_3:5419028-5419047 None:intergenic 25.0%
!! ATATATGTTTGGTTCAAAAG+AGG + chr4_3:5419029-5419048 None:intergenic 25.0%
! AATAGAGAACAAAACTATCA+AGG + chr4_3:5419156-5419175 None:intergenic 25.0%
! AATAAATTCAAATTAGAGCG+AGG + chr4_3:5419181-5419200 None:intergenic 25.0%
! CTGAGAATACAGAATAAAAA+GGG + chr4_3:5419311-5419330 None:intergenic 25.0%
! ACTGAGAATACAGAATAAAA+AGG + chr4_3:5419312-5419331 None:intergenic 25.0%
! TATAACTTCTTTATGTGTCT+AGG - chr4_3:5419353-5419372 Msa0626030:intron 25.0%
! ATAACTTCTTTATGTGTCTA+GGG - chr4_3:5419354-5419373 Msa0626030:intron 25.0%
! AAATTTACAATCCTCTATTG+AGG + chr4_3:5419898-5419917 None:intergenic 25.0%
!!! GGATGTTTAAAAGACTTTTT+TGG - chr4_3:5420028-5420047 Msa0626030:intron 25.0%
!! TAGAATCTGAAATATGACAA+TGG - chr4_3:5420319-5420338 Msa0626030:intron 25.0%
! AATCACAATTAAATAGACCA+AGG + chr4_3:5420553-5420572 None:intergenic 25.0%
ACGACCTAGAAGAATATATA+TGG - chr4_3:5412883-5412902 Msa0626030:three_prime_UTR 30.0%
GGTTATAAATTGGACTTATG+TGG - chr4_3:5412931-5412950 Msa0626030:three_prime_UTR 30.0%
TAACTCATTCCAAAAAGGAA+AGG + chr4_3:5413024-5413043 None:intergenic 30.0%
AGAACTAACTCATTCCAAAA+AGG + chr4_3:5413029-5413048 None:intergenic 30.0%
!!! TTTTTGGAATGAGTTAGTTC+TGG - chr4_3:5413028-5413047 Msa0626030:three_prime_UTR 30.0%
!! TATGACTAAGATTGAGTTGA+AGG - chr4_3:5413110-5413129 Msa0626030:three_prime_UTR 30.0%
CAAAATAAATACTACTCGAG+AGG - chr4_3:5413274-5413293 Msa0626030:three_prime_UTR 30.0%
TGATTTGATGTGATTGATGA+TGG - chr4_3:5413489-5413508 Msa0626030:CDS 30.0%
AGAATAACTTCCCACATAAA+CGG + chr4_3:5413820-5413839 None:intergenic 30.0%
ATCTTTGCGTTGTTAAATAG+TGG - chr4_3:5413889-5413908 Msa0626030:intron 30.0%
TTGTACTAAACAGTGTATTG+TGG + chr4_3:5413943-5413962 None:intergenic 30.0%
ACACTGTTTAGTACAAAATG+TGG - chr4_3:5413947-5413966 Msa0626030:intron 30.0%
!! TCTTACTTTGGTGTTTATGA+TGG - chr4_3:5414578-5414597 Msa0626030:CDS 30.0%
ATTTGAAAATGAGCATGGAT+GGG + chr4_3:5414652-5414671 None:intergenic 30.0%
TATTTGAAAATGAGCATGGA+TGG + chr4_3:5414653-5414672 None:intergenic 30.0%
! CTCATTTTCAAATACAGCAA+GGG - chr4_3:5414659-5414678 Msa0626030:intron 30.0%
!! ATCAATGCTTAGTCTTGAAT+GGG + chr4_3:5414749-5414768 None:intergenic 30.0%
!! AATCAATGCTTAGTCTTGAA+TGG + chr4_3:5414750-5414769 None:intergenic 30.0%
CATTTCAAAGTATAGTGATG+GGG - chr4_3:5414818-5414837 Msa0626030:CDS 30.0%
GAAAGATTTCTGTAAAGATG+TGG + chr4_3:5414991-5415010 None:intergenic 30.0%
CTTTACAGAAATCTTTCCTA+AGG - chr4_3:5414994-5415013 Msa0626030:intron 30.0%
! CACAAAATATTTTACCACCA+GGG - chr4_3:5415163-5415182 Msa0626030:intron 30.0%
! ACAAAATATTTTACCACCAG+GGG - chr4_3:5415164-5415183 Msa0626030:intron 30.0%
TCTCTTAGATACAAATTACC+CGG - chr4_3:5415203-5415222 Msa0626030:intron 30.0%
AAATTCTAACTCGAGCAATA+GGG + chr4_3:5415290-5415309 None:intergenic 30.0%
TAAATTCTAACTCGAGCAAT+AGG + chr4_3:5415291-5415310 None:intergenic 30.0%
GTTAACATCATTTGCACATT+TGG - chr4_3:5415648-5415667 Msa0626030:intron 30.0%
GATAAAATGGAAAAGTTGTC+TGG - chr4_3:5415830-5415849 Msa0626030:CDS 30.0%
TAAGTTAGAAAAACAAGCAG+AGG + chr4_3:5415967-5415986 None:intergenic 30.0%
!! GTTATCTATTGGTGTTGAAT+GGG - chr4_3:5416012-5416031 Msa0626030:intron 30.0%
! ATATGCATAATTTTCGTTGC+TGG - chr4_3:5416037-5416056 Msa0626030:intron 30.0%
ACGATTTCCATTCTAAATCA+AGG + chr4_3:5416277-5416296 None:intergenic 30.0%
!! GTGTACTATGTCATTTCTTT+TGG - chr4_3:5416648-5416667 Msa0626030:intron 30.0%
AGGTGAGTAACATATAAAAC+TGG + chr4_3:5416696-5416715 None:intergenic 30.0%
ATTTAGCTGTGCAAATTGTA+AGG - chr4_3:5416877-5416896 Msa0626030:intron 30.0%
TTCTGAATTGTCTACATTCA+CGG - chr4_3:5416927-5416946 Msa0626030:intron 30.0%
!! TCCGAGTTGACTTTTAATTA+AGG + chr4_3:5416995-5417014 None:intergenic 30.0%
ATTCTAGATGTGTGTTATCA+AGG - chr4_3:5417269-5417288 Msa0626030:CDS 30.0%
ATTGACAACATAGGCATATA+TGG + chr4_3:5417527-5417546 None:intergenic 30.0%
AAATGGTGAATTGACAACAT+AGG + chr4_3:5417536-5417555 None:intergenic 30.0%
!!! GACTTTTTTGTCCTCAAATT+TGG + chr4_3:5417658-5417677 None:intergenic 30.0%
CAAAAAAGTCGAAGAAAGAA+AGG - chr4_3:5417668-5417687 Msa0626030:intron 30.0%
AAAACAAAGATATTTGTCGC+TGG + chr4_3:5417727-5417746 None:intergenic 30.0%
TGTTTATATTGCTGCAGATT+GGG + chr4_3:5417857-5417876 None:intergenic 30.0%
ATGTTTATATTGCTGCAGAT+TGG + chr4_3:5417858-5417877 None:intergenic 30.0%
TCAAGGCAACATAAAAAACA+CGG - chr4_3:5417877-5417896 Msa0626030:intron 30.0%
AGTCAATGGAAGTTTGAATT+TGG - chr4_3:5418297-5418316 Msa0626030:intron 30.0%
!!! GAGCAATTGGTAATTTTTTC+TGG - chr4_3:5418323-5418342 Msa0626030:intron 30.0%
TATATCACAAACACTTGCAA+CGG + chr4_3:5418440-5418459 None:intergenic 30.0%
TATAGTTCTCTTTCTATCAC+AGG - chr4_3:5418456-5418475 Msa0626030:intron 30.0%
CAATATAGCAAATAAGACAG+AGG + chr4_3:5418616-5418635 None:intergenic 30.0%
ACCAAAAAACTCAAACCAAA+CGG + chr4_3:5418704-5418723 None:intergenic 30.0%
!!! TTTGGTTTGAGTTTTTTGGT+GGG - chr4_3:5418704-5418723 Msa0626030:intron 30.0%
!! CTTAAATTTTTAGAAGGGGA+GGG - chr4_3:5418766-5418785 Msa0626030:intron 30.0%
!! TTAAATTTTTAGAAGGGGAG+GGG - chr4_3:5418767-5418786 Msa0626030:intron 30.0%
AGCAATAAATGTGTCTATGA+GGG + chr4_3:5418801-5418820 None:intergenic 30.0%
AAGCAATAAATGTGTCTATG+AGG + chr4_3:5418802-5418821 None:intergenic 30.0%
! AAAACATGTTTGGTTCACAA+GGG + chr4_3:5418975-5418994 None:intergenic 30.0%
! AAAAACATGTTTGGTTCACA+AGG + chr4_3:5418976-5418995 None:intergenic 30.0%
ATGGCTCCAATTATAAAATC+TGG - chr4_3:5419493-5419512 Msa0626030:CDS 30.0%
ACATCAAATCATGATTATGC+AGG - chr4_3:5419527-5419546 Msa0626030:intron 30.0%
!! TTTGTGAGAAAGTATTCGAT+AGG - chr4_3:5419568-5419587 Msa0626030:intron 30.0%
TTTGAACTGAATCAAGATCA+TGG + chr4_3:5419637-5419656 None:intergenic 30.0%
GTTAACAATCATGTTGTCAT+TGG + chr4_3:5420061-5420080 None:intergenic 30.0%
! GATTATTAGTTTCTCTCTCA+TGG - chr4_3:5420236-5420255 Msa0626030:intron 30.0%
! TTGCTTGTTAATTTACTGCA+TGG - chr4_3:5420268-5420287 Msa0626030:intron 30.0%
TCAGCATGTTTAAAAGATCA+AGG + chr4_3:5420422-5420441 None:intergenic 30.0%
ATGAGAAATTGATGCACTGT+CGG - chr4_3:5412844-5412863 Msa0626030:three_prime_UTR 35.0%
!!! ATGAGTTAGTTCTGGTGTTT+TGG - chr4_3:5413036-5413055 Msa0626030:three_prime_UTR 35.0%
!! CTTTGAGATAGAATCTGTTC+TGG - chr4_3:5413248-5413267 Msa0626030:three_prime_UTR 35.0%
GCAGACAAAATAGATTCTAG+AGG + chr4_3:5413337-5413356 None:intergenic 35.0%
! TATTTTGTCTGCTCCAAAAG+CGG - chr4_3:5413345-5413364 Msa0626030:CDS 35.0%
ACCAAACATACACGAATCAA+TGG - chr4_3:5413369-5413388 Msa0626030:CDS 35.0%
!! TCCATTGATTCGTGTATGTT+TGG + chr4_3:5413373-5413392 None:intergenic 35.0%
AAGTCTCAAACACACATTTG+AGG - chr4_3:5413406-5413425 Msa0626030:CDS 35.0%
! CACATTTGAGGTCTATCTAA+TGG - chr4_3:5413418-5413437 Msa0626030:CDS 35.0%
! TTGTGATTGCAGTTTGAGAT+GGG - chr4_3:5413553-5413572 Msa0626030:intron 35.0%
! GCTTGTTAATCACGGTTATT+TGG - chr4_3:5413794-5413813 Msa0626030:intron 35.0%
!! AAGTAAAGTGGGTTTGTTAG+TGG - chr4_3:5413844-5413863 Msa0626030:CDS 35.0%
ATAGTGGTACTATAGCAAAG+CGG - chr4_3:5413905-5413924 Msa0626030:intron 35.0%
! TGGTCAAATAGTGTTGCTAT+AGG - chr4_3:5413967-5413986 Msa0626030:intron 35.0%
! TACTACAACGAGAAGCATAA+AGG - chr4_3:5414256-5414275 Msa0626030:intron 35.0%
GAATTTCTCAACACTAGAAG+AGG + chr4_3:5414383-5414402 None:intergenic 35.0%
TGATACAGATGCTTCATGTT+TGG - chr4_3:5414430-5414449 Msa0626030:intron 35.0%
GCTGTATTTGAAAATGAGCA+TGG + chr4_3:5414657-5414676 None:intergenic 35.0%
! GCTCATTTTCAAATACAGCA+AGG - chr4_3:5414658-5414677 Msa0626030:intron 35.0%
! GCACAAAATATTTTACCACC+AGG - chr4_3:5415162-5415181 Msa0626030:intron 35.0%
AATTCTAACTCGAGCAATAG+GGG + chr4_3:5415289-5415308 None:intergenic 35.0%
! CTATGCATTTGAGGAGTTTT+AGG - chr4_3:5415541-5415560 Msa0626030:intron 35.0%
GCAAATGATGTTAACCATGA+AGG + chr4_3:5415643-5415662 None:intergenic 35.0%
TTCTTCATATTGAGGCAGAA+TGG - chr4_3:5415757-5415776 Msa0626030:intron 35.0%
GATGCATACTCGTTATCTAT+TGG - chr4_3:5416001-5416020 Msa0626030:intron 35.0%
!! CGTTATCTATTGGTGTTGAA+TGG - chr4_3:5416011-5416030 Msa0626030:intron 35.0%
ACGAGCAATGTAACAACAAA+AGG + chr4_3:5416109-5416128 None:intergenic 35.0%
TGGAAATAGGTCTGATATTG+GGG + chr4_3:5416243-5416262 None:intergenic 35.0%
CTGGAAATAGGTCTGATATT+GGG + chr4_3:5416244-5416263 None:intergenic 35.0%
AAATCAAGGAAGAATACTCC+TGG + chr4_3:5416263-5416282 None:intergenic 35.0%
!! CAATATTGGGTCTTTGAAAC+TGG + chr4_3:5416323-5416342 None:intergenic 35.0%
GTTTCAAAGACCCAATATTG+CGG - chr4_3:5416323-5416342 Msa0626030:intron 35.0%
TTTCAAAGACCCAATATTGC+GGG - chr4_3:5416324-5416343 Msa0626030:intron 35.0%
TATTGCAAGTTCAGAATTGC+TGG - chr4_3:5416357-5416376 Msa0626030:intron 35.0%
AGTCGTTTCTGCATAAATTC+AGG + chr4_3:5416465-5416484 None:intergenic 35.0%
ATGCAACAAGAAAATATCCG+TGG + chr4_3:5416567-5416586 None:intergenic 35.0%
!! TTTGGTGTTTATAATGGCAC+TGG - chr4_3:5416666-5416685 Msa0626030:intron 35.0%
! TTGGTGTTTATAATGGCACT+GGG - chr4_3:5416667-5416686 Msa0626030:intron 35.0%
!!! ACACATTTTAGGGTTTGATG+TGG - chr4_3:5417074-5417093 Msa0626030:intron 35.0%
! TTATACAGTAGGGTGTTCAA+AGG + chr4_3:5417114-5417133 None:intergenic 35.0%
TTTGAACACCCTACTGTATA+AGG - chr4_3:5417113-5417132 Msa0626030:intron 35.0%
!! AAACTTGTTGTTGCAAATGC+TGG - chr4_3:5417244-5417263 Msa0626030:CDS 35.0%
AGATGTGTGTTATCAAGGAA+AGG - chr4_3:5417274-5417293 Msa0626030:CDS 35.0%
GAAGATTGCAAAACTGAAAG+AGG + chr4_3:5417316-5417335 None:intergenic 35.0%
AGACCTTTATATTAAAGGCG+TGG - chr4_3:5417361-5417380 Msa0626030:intron 35.0%
TATAAACTTGCACATGCTTG+AGG - chr4_3:5417501-5417520 Msa0626030:intron 35.0%
! GTTGTCAATTCACCATTTTG+CGG - chr4_3:5417538-5417557 Msa0626030:intron 35.0%
CTGCAGCAATATAAACATCA+AGG - chr4_3:5417860-5417879 Msa0626030:intron 35.0%
TCAAGCATAGTTGTCAATCT+TGG + chr4_3:5418008-5418027 None:intergenic 35.0%
! AAAGACAGGATTCTAAAAGC+TGG - chr4_3:5418253-5418272 Msa0626030:intron 35.0%
TTGAATTTGGCTAGAGCAAT+TGG - chr4_3:5418310-5418329 Msa0626030:intron 35.0%
ATATCACAAACACTTGCAAC+GGG + chr4_3:5418439-5418458 None:intergenic 35.0%
TCTTTCTATCACAGGAGATA+TGG - chr4_3:5418464-5418483 Msa0626030:intron 35.0%
ATACTTACTGAAGTTACGTC+AGG + chr4_3:5418543-5418562 None:intergenic 35.0%
! ATACTATTTGGGCATCGTTT+AGG - chr4_3:5418676-5418695 Msa0626030:intron 35.0%
! TACTATTTGGGCATCGTTTA+GGG - chr4_3:5418677-5418696 Msa0626030:intron 35.0%
!!! TCCGTTTGGTTTGAGTTTTT+TGG - chr4_3:5418700-5418719 Msa0626030:intron 35.0%
!!! GTTTGGTTTGAGTTTTTTGG+TGG - chr4_3:5418703-5418722 Msa0626030:intron 35.0%
!!! TTGGTTTGAGTTTTTTGGTG+GGG - chr4_3:5418705-5418724 Msa0626030:intron 35.0%
!! GCTTAAATTTTTAGAAGGGG+AGG - chr4_3:5418765-5418784 Msa0626030:intron 35.0%
GCAATAAATGTGTCTATGAG+GGG + chr4_3:5418800-5418819 None:intergenic 35.0%
ATTTATTGCTTCCCCCAAAT+TGG - chr4_3:5418811-5418830 Msa0626030:intron 35.0%
! AAACATGTTTGGTTCACAAG+GGG + chr4_3:5418974-5418993 None:intergenic 35.0%
! TTTCTTGTGATAGCTTGTGA+TGG - chr4_3:5419250-5419269 Msa0626030:intron 35.0%
! TTCTTGTGATAGCTTGTGAT+GGG - chr4_3:5419251-5419270 Msa0626030:intron 35.0%
TATACATGGCCAGTTAAAGA+CGG - chr4_3:5419408-5419427 Msa0626030:CDS 35.0%
GAAAACTTACCGTCTTTAAC+TGG + chr4_3:5419420-5419439 None:intergenic 35.0%
GTCTATCTGTACAGTAAACA+AGG + chr4_3:5419451-5419470 None:intergenic 35.0%
TCTTGAATGTAGCATTCACA+TGG - chr4_3:5419474-5419493 Msa0626030:CDS 35.0%
! AACGACAAGAATCTGAAATC+TGG + chr4_3:5419872-5419891 None:intergenic 35.0%
TTGTCGTTAATCCTCAATAG+AGG - chr4_3:5419884-5419903 Msa0626030:intron 35.0%
! CTTGGTGACTTGAATATGAA+TGG - chr4_3:5419961-5419980 Msa0626030:intron 35.0%
!! AAGAATTCGGTGCAATGTTA+TGG - chr4_3:5420148-5420167 Msa0626030:intron 35.0%
TGCAATGTTATGGAAATGAC+AGG - chr4_3:5420158-5420177 Msa0626030:intron 35.0%
TAGAGGAAATTAGGGTTCGA+TGG + chr4_3:5412579-5412598 None:intergenic 40.0%
TGAGATAGAATCTGTTCTGG+AGG - chr4_3:5413251-5413270 Msa0626030:three_prime_UTR 40.0%
!! TGTATGTTTGGTTCCGCTTT+TGG + chr4_3:5413361-5413380 None:intergenic 40.0%
CAATCACATCAAATCAGCGA+AGG + chr4_3:5413485-5413504 None:intergenic 40.0%
GTTGTGATTGCAGTTTGAGA+TGG - chr4_3:5413552-5413571 Msa0626030:intron 40.0%
! TGTGATTGCAGTTTGAGATG+GGG - chr4_3:5413554-5413573 Msa0626030:intron 40.0%
! TATGGTTTGTCTTCCATGCA+GGG - chr4_3:5413640-5413659 Msa0626030:intron 40.0%
! CTTTCAACAGCTACGCATTT+TGG - chr4_3:5413743-5413762 Msa0626030:intron 40.0%
! CGTGTGATGCTTGTTAATCA+CGG - chr4_3:5413786-5413805 Msa0626030:intron 40.0%
GGTTATTTGGCCGTTTATGT+GGG - chr4_3:5413807-5413826 Msa0626030:intron 40.0%
CAGCTACACAACAGTGTTAT+AGG + chr4_3:5413993-5414012 None:intergenic 40.0%
! TACTACAATGAGGAGCATGA+AGG - chr4_3:5414203-5414222 Msa0626030:intron 40.0%
GGCTACTAAAGTACAAGAGA+AGG + chr4_3:5414460-5414479 None:intergenic 40.0%
!! TTTGGTGTTTATGATGGCCA+TGG - chr4_3:5414584-5414603 Msa0626030:CDS 40.0%
!! ATATGGCTTCACTGATTTGC+AGG - chr4_3:5414885-5414904 Msa0626030:intron 40.0%
AGGCATGAAGCTTATTTAGC+TGG - chr4_3:5414957-5414976 Msa0626030:intron 40.0%
AGTTTGACATGTAGTACCAC+AGG + chr4_3:5415139-5415158 None:intergenic 40.0%
CAAATTACCCGGAAACTAAG+TGG - chr4_3:5415214-5415233 Msa0626030:intron 40.0%
CAATAGGGGATATAGAGAGT+AGG + chr4_3:5415275-5415294 None:intergenic 40.0%
GACACATGTCTATGCATTTG+AGG - chr4_3:5415532-5415551 Msa0626030:intron 40.0%
AAAGTTGTCTGGTATGCTTG+AGG - chr4_3:5415841-5415860 Msa0626030:CDS 40.0%
AAGTTGTCTGGTATGCTTGA+GGG - chr4_3:5415842-5415861 Msa0626030:CDS 40.0%
GTATGCTTGAGGGGTTTATA+TGG - chr4_3:5415852-5415871 Msa0626030:CDS 40.0%
!! TTTTGAGGAGGTAACCACTA+AGG - chr4_3:5415919-5415938 Msa0626030:intron 40.0%
GAACAAACTGTGTTCCTTAG+TGG + chr4_3:5415936-5415955 None:intergenic 40.0%
ATCCTTGGTTGAACTTCCAA+CGG + chr4_3:5416134-5416153 None:intergenic 40.0%
AGTCTTGAGTTTGACATCCT+TGG + chr4_3:5416149-5416168 None:intergenic 40.0%
GGAAATAGGTCTGATATTGG+GGG + chr4_3:5416242-5416261 None:intergenic 40.0%
CCTGGAAATAGGTCTGATAT+TGG + chr4_3:5416245-5416264 None:intergenic 40.0%
CCAATATCAGACCTATTTCC+AGG - chr4_3:5416242-5416261 Msa0626030:intron 40.0%
GGAAGAATACTCCTGGAAAT+AGG + chr4_3:5416256-5416275 None:intergenic 40.0%
!! ATTGGGTCTTTGAAACTGGA+GGG + chr4_3:5416319-5416338 None:intergenic 40.0%
!! TATTGGGTCTTTGAAACTGG+AGG + chr4_3:5416320-5416339 None:intergenic 40.0%
TCTCATTAGCCCGCAATATT+GGG + chr4_3:5416336-5416355 None:intergenic 40.0%
TTCTCATTAGCCCGCAATAT+TGG + chr4_3:5416337-5416356 None:intergenic 40.0%
TGAGTAGACAAGCACAAACT+AGG + chr4_3:5416436-5416455 None:intergenic 40.0%
ACTCATAAGTTTGACCACCA+CGG - chr4_3:5416547-5416566 Msa0626030:intron 40.0%
CAACAAGAAAATATCCGTGG+TGG + chr4_3:5416564-5416583 None:intergenic 40.0%
! TATCATTTACAATGGTGGGG+TGG + chr4_3:5416612-5416631 None:intergenic 40.0%
GACAAGGCATAACAGCAATA+AGG + chr4_3:5416716-5416735 None:intergenic 40.0%
!!! TTTTAGGGTTTGATGTGGAC+TGG - chr4_3:5417079-5417098 Msa0626030:intron 40.0%
TGCAAAACTGAAAGAGGATG+TGG + chr4_3:5417310-5417329 None:intergenic 40.0%
GCACCACGCCTTTAATATAA+AGG + chr4_3:5417367-5417386 None:intergenic 40.0%
TGCAGTTACATGATGCTGAA+GGG - chr4_3:5417402-5417421 Msa0626030:intron 40.0%
!! TTTGTCCTCAAATTTGGTGC+AGG + chr4_3:5417652-5417671 None:intergenic 40.0%
TATGAAATTCACGACAGGGT+GGG + chr4_3:5418094-5418113 None:intergenic 40.0%
TTATGAAATTCACGACAGGG+TGG + chr4_3:5418095-5418114 None:intergenic 40.0%
TCTTTCTCAACCTCAAGATC+AGG + chr4_3:5418238-5418257 None:intergenic 40.0%
ATCTTGAGGTTGAGAAAGAC+AGG - chr4_3:5418239-5418258 Msa0626030:intron 40.0%
!!! TTTGAGTTTTTTGGTGGGGA+GGG - chr4_3:5418709-5418728 Msa0626030:intron 40.0%
TCCAGAAAACTCCAATTTGG+GGG + chr4_3:5418825-5418844 None:intergenic 40.0%
CTCCAGAAAACTCCAATTTG+GGG + chr4_3:5418826-5418845 None:intergenic 40.0%
CCTCCAGAAAACTCCAATTT+GGG + chr4_3:5418827-5418846 None:intergenic 40.0%
! CCAAATTGGAGTTTTCTGGA+GGG - chr4_3:5418825-5418844 Msa0626030:intron 40.0%
!! CAAATTGGAGTTTTCTGGAG+GGG - chr4_3:5418826-5418845 Msa0626030:intron 40.0%
! TTTGGTTCAAAAGAGGGAAG+GGG + chr4_3:5419022-5419041 None:intergenic 40.0%
! GTTTGGTTCAAAAGAGGGAA+GGG + chr4_3:5419023-5419042 None:intergenic 40.0%
! TGTTTGGTTCAAAAGAGGGA+AGG + chr4_3:5419024-5419043 None:intergenic 40.0%
! CAAGGAGCATATGACCTTTA+GGG + chr4_3:5419138-5419157 None:intergenic 40.0%
! TCAAGGAGCATATGACCTTT+AGG + chr4_3:5419139-5419158 None:intergenic 40.0%
! TGATAGCTTGTGATGGGATA+TGG - chr4_3:5419257-5419276 Msa0626030:intron 40.0%
CAGCTTGTGGACTTTATACA+TGG - chr4_3:5419394-5419413 Msa0626030:intron 40.0%
GCAGGAGAATAAACTTTCTG+TGG - chr4_3:5419545-5419564 Msa0626030:intron 40.0%
!! GAAAGTATTCGATAGGTGCT+TGG - chr4_3:5419575-5419594 Msa0626030:intron 40.0%
AGTGAGAGAATTTCAGACTC+AGG - chr4_3:5419775-5419794 Msa0626030:intron 40.0%
TTGTGACAACTGCTAGTTCA+TGG - chr4_3:5419916-5419935 Msa0626030:intron 40.0%
TGTGACAACTGCTAGTTCAT+GGG - chr4_3:5419917-5419936 Msa0626030:intron 40.0%
!! CTTGGCTTTGTACATAAGCT+TGG - chr4_3:5419943-5419962 Msa0626030:intron 40.0%
AAACGTTCAGCAAGCAATAC+TGG - chr4_3:5419988-5420007 Msa0626030:intron 40.0%
GAAAAGTAAGAACCTGTCTC+TGG - chr4_3:5420086-5420105 Msa0626030:intron 40.0%
TGAGCATCAACAAACTGGTT+GGG + chr4_3:5420213-5420232 None:intergenic 40.0%
ATGAGCATCAACAAACTGGT+TGG + chr4_3:5420214-5420233 None:intergenic 40.0%
TCACATGAGCATCAACAAAC+TGG + chr4_3:5420218-5420237 None:intergenic 40.0%
! TCAGAGGCCTTCTCTGTTTT+CGG + chr4_3:5413595-5413614 None:intergenic 45.0%
! CTATGGTTTGTCTTCCATGC+AGG - chr4_3:5413639-5413658 Msa0626030:intron 45.0%
CGGTTATTTGGCCGTTTATG+TGG - chr4_3:5413806-5413825 Msa0626030:intron 45.0%
TGATCTGCGATTGACATTGC+TGG - chr4_3:5414038-5414057 Msa0626030:intron 45.0%
GACGTAGACTCGTCCAAATA+CGG + chr4_3:5414560-5414579 None:intergenic 45.0%
GACGAGTCTACGTCTTACTT+TGG - chr4_3:5414566-5414585 Msa0626030:CDS 45.0%
TTTATGATGGCCATGGAGGT+TGG - chr4_3:5414591-5414610 Msa0626030:CDS 45.0%
AGACAAGATACCAACCTCCA+TGG + chr4_3:5414604-5414623 None:intergenic 45.0%
! TCCGTCTCTAGAAACTAGCT+GGG - chr4_3:5415101-5415120 Msa0626030:intron 45.0%
CATGTAGTACCACAGGTTTG+TGG + chr4_3:5415132-5415151 None:intergenic 45.0%
CAAGGATGCTAAATATCCCC+TGG + chr4_3:5415183-5415202 None:intergenic 45.0%
CCTACAACCACTTAGTTTCC+GGG + chr4_3:5415224-5415243 None:intergenic 45.0%
GCCTACAACCACTTAGTTTC+CGG + chr4_3:5415225-5415244 None:intergenic 45.0%
TACGAAAGACTCAGTTCAGG+TGG + chr4_3:5415590-5415609 None:intergenic 45.0%
CCATACGAAAGACTCAGTTC+AGG + chr4_3:5415593-5415612 None:intergenic 45.0%
CCTGAACTGAGTCTTTCGTA+TGG - chr4_3:5415590-5415609 Msa0626030:intron 45.0%
AGAATGGATGAGATGATGCG+CGG - chr4_3:5415773-5415792 Msa0626030:intron 45.0%
ACAAAGAGGGTGGAGAGAAT+TGG - chr4_3:5415796-5415815 Msa0626030:CDS 45.0%
TGGAGAGAATTGGCAGTCTT+GGG - chr4_3:5415806-5415825 Msa0626030:CDS 45.0%
GGCAGTCTTGGGAGATAAAA+TGG - chr4_3:5415817-5415836 Msa0626030:CDS 45.0%
AGTTGTCTGGTATGCTTGAG+GGG - chr4_3:5415843-5415862 Msa0626030:CDS 45.0%
!! TCATTGGCTTCACTACTCCT+GGG + chr4_3:5415881-5415900 None:intergenic 45.0%
!! TTCATTGGCTTCACTACTCC+TGG + chr4_3:5415882-5415901 None:intergenic 45.0%
AATAGGTCTGATATTGGGGG+TGG + chr4_3:5416239-5416258 None:intergenic 45.0%
ATGGAAATCGTGTTGTACCC+AGG - chr4_3:5416286-5416305 Msa0626030:intron 45.0%
TGGAAATCGTGTTGTACCCA+GGG - chr4_3:5416287-5416306 Msa0626030:intron 45.0%
!! TCTTTGAAACTGGAGGGTGA+TGG + chr4_3:5416313-5416332 None:intergenic 45.0%
AGTTCAGAATTGCTGGACCA+AGG - chr4_3:5416364-5416383 Msa0626030:intron 45.0%
CCATTTGTTCCTACACACCT+TGG + chr4_3:5416384-5416403 None:intergenic 45.0%
CCAAGGTGTGTAGGAACAAA+TGG - chr4_3:5416381-5416400 Msa0626030:intron 45.0%
GACCCCATTCTGATTTCAGT+GGG - chr4_3:5417176-5417195 Msa0626030:CDS 45.0%
TGGCCCACTGAAATCAGAAT+GGG + chr4_3:5417182-5417201 None:intergenic 45.0%
TTGGCCCACTGAAATCAGAA+TGG + chr4_3:5417183-5417202 None:intergenic 45.0%
TGTGTTATCAAGGAAAGGCC+AGG - chr4_3:5417279-5417298 Msa0626030:CDS 45.0%
!! AAAGAGGATGTGGAAGTACC+TGG + chr4_3:5417300-5417319 None:intergenic 45.0%
GTGCAGTTACATGATGCTGA+AGG - chr4_3:5417401-5417420 Msa0626030:intron 45.0%
! GTCAATTCACCATTTTGCGG+TGG - chr4_3:5417541-5417560 Msa0626030:intron 45.0%
TGCGACTCAGAATTGAGTCA+CGG - chr4_3:5417596-5417615 Msa0626030:intron 45.0%
TGTGTGCAACAGGAACTTGT+TGG - chr4_3:5417764-5417783 Msa0626030:intron 45.0%
!! TGCAACAGGAACTTGTTGGT+AGG - chr4_3:5417768-5417787 Msa0626030:intron 45.0%
!! AGGAACTTGTTGGTAGGTAG+AGG - chr4_3:5417774-5417793 Msa0626030:intron 45.0%
!! AACTTGTTGGTAGGTAGAGG+CGG - chr4_3:5417777-5417796 Msa0626030:intron 45.0%
! GTAGTCTTGCGCTTTCAAAC+TGG + chr4_3:5417807-5417826 None:intergenic 45.0%
TGCTGCAGATTGGGACTTAA+AGG + chr4_3:5417848-5417867 None:intergenic 45.0%
GGATGGGACTTTAATACCTC+AGG - chr4_3:5417919-5417938 Msa0626030:intron 45.0%
! GCTGCTATTTGAAAAGCCTG+AGG + chr4_3:5417938-5417957 None:intergenic 45.0%
AAACAGGGATAGCGTGTTGT+GGG + chr4_3:5417964-5417983 None:intergenic 45.0%
AAAACAGGGATAGCGTGTTG+TGG + chr4_3:5417965-5417984 None:intergenic 45.0%
! ACAACACGCTATCCCTGTTT+TGG - chr4_3:5417964-5417983 Msa0626030:intron 45.0%
! CAACACGCTATCCCTGTTTT+GGG - chr4_3:5417965-5417984 Msa0626030:intron 45.0%
GTCAATCTTGGATAGCAGAG+CGG + chr4_3:5417996-5418015 None:intergenic 45.0%
ATGAAATTCACGACAGGGTG+GGG + chr4_3:5418093-5418112 None:intergenic 45.0%
AGATCACAAGCCTGATCTTG+AGG - chr4_3:5418225-5418244 Msa0626030:intron 45.0%
! GACAGGATTCTAAAAGCTGG+CGG - chr4_3:5418256-5418275 Msa0626030:intron 45.0%
! ATCCAAGTTGGACGAGTCAA+TGG - chr4_3:5418283-5418302 Msa0626030:intron 45.0%
!! TTCCATTGACTCGTCCAACT+TGG + chr4_3:5418288-5418307 None:intergenic 45.0%
GTATTTGCCTGCTGAAAAGC+AGG - chr4_3:5418503-5418522 Msa0626030:CDS 45.0%
!!! GTTTGAGTTTTTTGGTGGGG+AGG - chr4_3:5418708-5418727 Msa0626030:intron 45.0%
!!! TTGAGTTTTTTGGTGGGGAG+GGG - chr4_3:5418710-5418729 Msa0626030:intron 45.0%
! TCCCCCAAATTGGAGTTTTC+TGG - chr4_3:5418821-5418840 Msa0626030:intron 45.0%
! CCCAAATTGGAGTTTTCTGG+AGG - chr4_3:5418824-5418843 Msa0626030:intron 45.0%
CCCTCCAGAAAACTCCAATT+TGG + chr4_3:5418828-5418847 None:intergenic 45.0%
! ATGTTTGGTTCACAAGGGGA+GGG + chr4_3:5418970-5418989 None:intergenic 45.0%
!! AGGGATTTTAATGGAGGGGA+GGG + chr4_3:5419083-5419102 None:intergenic 45.0%
!! AGGGGAGGGATTTTAATGGA+GGG + chr4_3:5419088-5419107 None:intergenic 45.0%
! TTTGGTTCAATGGATGGGAG+GGG + chr4_3:5419111-5419130 None:intergenic 45.0%
! GTTTGGTTCAATGGATGGGA+GGG + chr4_3:5419112-5419131 None:intergenic 45.0%
CTCCCATCCATTGAACCAAA+CGG - chr4_3:5419111-5419130 Msa0626030:intron 45.0%
! GTCCGTTTGGTTCAATGGAT+GGG + chr4_3:5419116-5419135 None:intergenic 45.0%
! TTAGGGTCCGTTTGGTTCAA+TGG + chr4_3:5419121-5419140 None:intergenic 45.0%
TTGAACCAAACGGACCCTAA+AGG - chr4_3:5419121-5419140 Msa0626030:intron 45.0%
!! TATGACCTTTAGGGTCCGTT+TGG + chr4_3:5419129-5419148 None:intergenic 45.0%
GTATAAAGTCCACAAGCTGC+TGG + chr4_3:5419393-5419412 None:intergenic 45.0%
!! ACAGAAGCATCTGAAGTCAG+AGG + chr4_3:5419663-5419682 None:intergenic 45.0%
GAATTTCAGACTCAGGCAGA+TGG - chr4_3:5419782-5419801 Msa0626030:intron 45.0%
! TGCATGTTGAAGCACTAGTG+AGG - chr4_3:5419820-5419839 Msa0626030:intron 45.0%
! GCATGTTGAAGCACTAGTGA+GGG - chr4_3:5419821-5419840 Msa0626030:intron 45.0%
! CATGTTGAAGCACTAGTGAG+GGG - chr4_3:5419822-5419841 Msa0626030:intron 45.0%
GTGACAACTGCTAGTTCATG+GGG - chr4_3:5419918-5419937 Msa0626030:intron 45.0%
CTGGTGTAGACACAGTTACA+TGG - chr4_3:5420007-5420026 Msa0626030:intron 45.0%
ATGAATACGACTCCAGAGAC+AGG + chr4_3:5420101-5420120 None:intergenic 45.0%
AGCATCAACAAACTGGTTGG+GGG + chr4_3:5420211-5420230 None:intergenic 45.0%
GAGCATCAACAAACTGGTTG+GGG + chr4_3:5420212-5420231 None:intergenic 45.0%
TTGACGTGTCAACAATGGTG+AGG + chr4_3:5420396-5420415 None:intergenic 45.0%
GGAAGTTGACGTGTCAACAA+TGG + chr4_3:5420401-5420420 None:intergenic 45.0%
TCGATGTCTCAACAATGGTG+AGG + chr4_3:5420527-5420546 None:intergenic 45.0%
GGAAGTCGATGTCTCAACAA+TGG + chr4_3:5420532-5420551 None:intergenic 45.0%
!! TGTTGAGACATCGACTTCCT+TGG - chr4_3:5420533-5420552 Msa0626030:CDS 45.0%
GAGTACCCCGAAAACAGAGA+AGG - chr4_3:5413585-5413604 Msa0626030:intron 50.0%
! AGAGGCCTTCTCTGTTTTCG+GGG + chr4_3:5413593-5413612 None:intergenic 50.0%
! CAGAGGCCTTCTCTGTTTTC+GGG + chr4_3:5413594-5413613 None:intergenic 50.0%
! ACAGAGAAGGCCTCTGAAGA+TGG - chr4_3:5413598-5413617 Msa0626030:intron 50.0%
! GCCTCTGAAGATGGTGAGAA+TGG - chr4_3:5413607-5413626 Msa0626030:intron 50.0%
GCCATTCTCACCATCTTCAG+AGG + chr4_3:5413611-5413630 None:intergenic 50.0%
GAGAATGGCATGCTTCGCTA+TGG - chr4_3:5413622-5413641 Msa0626030:intron 50.0%
GTTTGTCTTCCATGCAGGGT+TGG - chr4_3:5413644-5413663 Msa0626030:intron 50.0%
ATACGGATGAGCTGCATGCT+GGG + chr4_3:5414543-5414562 None:intergenic 50.0%
AATACGGATGAGCTGCATGC+TGG + chr4_3:5414544-5414563 None:intergenic 50.0%
GCATGCAGCTCATCCGTATT+TGG - chr4_3:5414544-5414563 Msa0626030:CDS 50.0%
GGTGTTTATGATGGCCATGG+AGG - chr4_3:5414587-5414606 Msa0626030:CDS 50.0%
TGCCAAGTTTCTACACCAGC+AGG - chr4_3:5414929-5414948 Msa0626030:intron 50.0%
CACCTGCTGGTGTAGAAACT+TGG + chr4_3:5414934-5414953 None:intergenic 50.0%
TTCTACACCAGCAGGTGCTT+AGG - chr4_3:5414937-5414956 Msa0626030:intron 50.0%
AAGCCAGGGGACGAGATAAT+AGG - chr4_3:5415071-5415090 Msa0626030:intron 50.0%
AGCCAGGGGACGAGATAATA+GGG - chr4_3:5415072-5415091 Msa0626030:intron 50.0%
AACCCTATTATCTCGTCCCC+TGG + chr4_3:5415077-5415096 None:intergenic 50.0%
AGGGGACGAGATAATAGGGT+TGG - chr4_3:5415076-5415095 Msa0626030:intron 50.0%
! GTCCGTCTCTAGAAACTAGC+TGG - chr4_3:5415100-5415119 Msa0626030:intron 50.0%
! GCCCAGCTAGTTTCTAGAGA+CGG + chr4_3:5415105-5415124 None:intergenic 50.0%
AGTACCACAGGTTTGTGGCT+AGG + chr4_3:5415127-5415146 None:intergenic 50.0%
GGATGCTAAATATCCCCTGG+TGG + chr4_3:5415180-5415199 None:intergenic 50.0%
CCCGGAAACTAAGTGGTTGT+AGG - chr4_3:5415221-5415240 Msa0626030:intron 50.0%
! CCAAGCCTTATCCCACTAAG+CGG - chr4_3:5415429-5415448 Msa0626030:intron 50.0%
! CAAGCCTTATCCCACTAAGC+GGG - chr4_3:5415430-5415449 Msa0626030:intron 50.0%
! AAGCCTTATCCCACTAAGCG+GGG - chr4_3:5415431-5415450 Msa0626030:intron 50.0%
AGATGATGCGCGGACAAAGA+GGG - chr4_3:5415783-5415802 Msa0626030:intron 50.0%
GTGGAGAGAATTGGCAGTCT+TGG - chr4_3:5415805-5415824 Msa0626030:CDS 50.0%
AGGGGTTTATATGGTCTCCC+AGG - chr4_3:5415861-5415880 Msa0626030:CDS 50.0%
! CAATGAACGTGCCGATGAGT+GGG - chr4_3:5415895-5415914 Msa0626030:CDS 50.0%
CTCCTCAAAAGCCCACTCAT+CGG + chr4_3:5415909-5415928 None:intergenic 50.0%
GTTACATTGCTCGTGTCCGT+TGG - chr4_3:5416115-5416134 Msa0626030:intron 50.0%
GTCCGTTGGAAGTTCAACCA+AGG - chr4_3:5416129-5416148 Msa0626030:intron 50.0%
ATTGCTGGACCAAGGTGTGT+AGG - chr4_3:5416372-5416391 Msa0626030:intron 50.0%
GGACCCCATTCTGATTTCAG+TGG - chr4_3:5417175-5417194 Msa0626030:CDS 50.0%
GGCCCACTGAAATCAGAATG+GGG + chr4_3:5417181-5417200 None:intergenic 50.0%
GATTTCAGTGGGCCAAACTG+TGG - chr4_3:5417187-5417206 Msa0626030:CDS 50.0%
! TTCACCATTTTGCGGTGGAG+TGG - chr4_3:5417546-5417565 Msa0626030:intron 50.0%
! GGAGCTTTTCACGCAGATCA+CGG - chr4_3:5417617-5417636 Msa0626030:intron 50.0%
!! CCTCAAATTTGGTGCAGGTC+TGG + chr4_3:5417647-5417666 None:intergenic 50.0%
CCAGACCTGCACCAAATTTG+AGG - chr4_3:5417644-5417663 Msa0626030:intron 50.0%
CACACACAAGCAGATCTAGC+TGG + chr4_3:5417750-5417769 None:intergenic 50.0%
GATCTGCTTGTGTGTGCAAC+AGG - chr4_3:5417754-5417773 Msa0626030:intron 50.0%
GGGTGGGGAGTTTAGACTTT+GGG + chr4_3:5418072-5418091 None:intergenic 50.0%
TGAAATTCACGACAGGGTGG+GGG + chr4_3:5418092-5418111 None:intergenic 50.0%
CAAACACTTGCAACGGGTGA+AGG + chr4_3:5418433-5418452 None:intergenic 50.0%
!! GTCACAACCTGCTTTTCAGC+AGG + chr4_3:5418513-5418532 None:intergenic 50.0%
!! ATTGGAGTTTTCTGGAGGGG+AGG - chr4_3:5418829-5418848 Msa0626030:intron 50.0%
!! TTGGAGTTTTCTGGAGGGGA+GGG - chr4_3:5418830-5418849 Msa0626030:intron 50.0%
! TGTTTGGTTCACAAGGGGAG+GGG + chr4_3:5418969-5418988 None:intergenic 50.0%
! CATGTTTGGTTCACAAGGGG+AGG + chr4_3:5418971-5418990 None:intergenic 50.0%
TTCAAAAGAGGGAAGGGGAG+GGG + chr4_3:5419017-5419036 None:intergenic 50.0%
GTTCAAAAGAGGGAAGGGGA+GGG + chr4_3:5419018-5419037 None:intergenic 50.0%
TTTAATGGAGGGGAGGGGAA+GGG + chr4_3:5419077-5419096 None:intergenic 50.0%
! TTTTAATGGAGGGGAGGGGA+AGG + chr4_3:5419078-5419097 None:intergenic 50.0%
!! GGGATTTTAATGGAGGGGAG+GGG + chr4_3:5419082-5419101 None:intergenic 50.0%
!! GAGGGATTTTAATGGAGGGG+AGG + chr4_3:5419084-5419103 None:intergenic 50.0%
!! GGGGAGGGATTTTAATGGAG+GGG + chr4_3:5419087-5419106 None:intergenic 50.0%
!! GAGGGGAGGGATTTTAATGG+AGG + chr4_3:5419089-5419108 None:intergenic 50.0%
! CGTTTGGTTCAATGGATGGG+AGG + chr4_3:5419113-5419132 None:intergenic 50.0%
! GGTCCGTTTGGTTCAATGGA+TGG + chr4_3:5419117-5419136 None:intergenic 50.0%
TCAACCCACTCCTAATCCTC+CGG - chr4_3:5419707-5419726 Msa0626030:intron 50.0%
TCAGCTTCAGACTGTTGTGC+CGG + chr4_3:5419729-5419748 None:intergenic 50.0%
CTGCTAGTTCATGGGGTTCT+TGG - chr4_3:5419925-5419944 Msa0626030:intron 50.0%
CTTCATGCCTAAGCACCTGC+TGG + chr4_3:5414947-5414966 None:intergenic 55.0%
ACTGGGTGCCAGTAAAAGCC+AGG - chr4_3:5415056-5415075 Msa0626030:intron 55.0%
CTGGGTGCCAGTAAAAGCCA+GGG - chr4_3:5415057-5415076 Msa0626030:intron 55.0%
TGGGTGCCAGTAAAAGCCAG+GGG - chr4_3:5415058-5415077 Msa0626030:intron 55.0%
!! TCTCGTCCCCTGGCTTTTAC+TGG + chr4_3:5415067-5415086 None:intergenic 55.0%
CCGCTTAGTGGGATAAGGCT+TGG + chr4_3:5415432-5415451 None:intergenic 55.0%
CTTATCCCACTAAGCGGGGT+CGG - chr4_3:5415435-5415454 Msa0626030:intron 55.0%
GAGATGATGCGCGGACAAAG+AGG - chr4_3:5415782-5415801 Msa0626030:intron 55.0%
CCACTCATCGGCACGTTCAT+TGG + chr4_3:5415897-5415916 None:intergenic 55.0%
! CCAATGAACGTGCCGATGAG+TGG - chr4_3:5415894-5415913 Msa0626030:CDS 55.0%
!! TGCCGATGAGTGGGCTTTTG+AGG - chr4_3:5415904-5415923 Msa0626030:intron 55.0%
!! CGATGAGTGGGCTTTTGAGG+AGG - chr4_3:5415907-5415926 Msa0626030:intron 55.0%
TGGGCCAAACTGTGGAAGCA+CGG - chr4_3:5417195-5417214 Msa0626030:CDS 55.0%
! ACCATTTTGCGGTGGAGTGG+CGG - chr4_3:5417549-5417568 Msa0626030:intron 55.0%
AGGGATAGCGTGTTGTGGGT+TGG + chr4_3:5417960-5417979 None:intergenic 55.0%
GAGCGGCTGATCCCAAAACA+GGG + chr4_3:5417979-5417998 None:intergenic 55.0%
AGAGCGGCTGATCCCAAAAC+AGG + chr4_3:5417980-5417999 None:intergenic 55.0%
GGGGTGGGGAGTTTAGACTT+TGG + chr4_3:5418073-5418092 None:intergenic 55.0%
GCTGGCGGTTTCATCCAAGT+TGG - chr4_3:5418271-5418290 Msa0626030:intron 55.0%
! GGCATCGTTTAGGGTCCGTT+TGG - chr4_3:5418686-5418705 Msa0626030:intron 55.0%
!!! AGTTTTTTGGTGGGGAGGGG+AGG - chr4_3:5418713-5418732 Msa0626030:intron 55.0%
!!! GTTTTTTGGTGGGGAGGGGA+GGG - chr4_3:5418714-5418733 Msa0626030:intron 55.0%
!!! TTTTTTGGTGGGGAGGGGAG+GGG - chr4_3:5418715-5418734 Msa0626030:intron 55.0%
!! AGTTTTCTGGAGGGGAGGGA+AGG - chr4_3:5418834-5418853 Msa0626030:intron 55.0%
GGTTCAAAAGAGGGAAGGGG+AGG + chr4_3:5419019-5419038 None:intergenic 55.0%
! GGGGAGGGGAGGGATTTTAA+TGG + chr4_3:5418955-5418974 None:intergenic 55.0%
TTCAATGGATGGGAGGGGAG+GGG + chr4_3:5419106-5419125 None:intergenic 55.0%
GTTCAATGGATGGGAGGGGA+GGG + chr4_3:5419107-5419126 None:intergenic 55.0%
AAAGTCCACAAGCTGCTGGC+TGG + chr4_3:5419389-5419408 None:intergenic 55.0%
GTTGAGCAGATGACTCAGGC+TGG + chr4_3:5419692-5419711 None:intergenic 55.0%
! GTGGGTTGAGCAGATGACTC+AGG + chr4_3:5419696-5419715 None:intergenic 55.0%
TGTGCCGGAGGATTAGGAGT+GGG + chr4_3:5419714-5419733 None:intergenic 55.0%
TTGTGCCGGAGGATTAGGAG+TGG + chr4_3:5419715-5419734 None:intergenic 55.0%
GACTGTTGTGCCGGAGGATT+AGG + chr4_3:5419720-5419739 None:intergenic 55.0%
! GTTGAAGCACTAGTGAGGGG+AGG - chr4_3:5419825-5419844 Msa0626030:intron 55.0%
TAGTGAGGGGAGGTGGTTCA+TGG - chr4_3:5419835-5419854 Msa0626030:intron 55.0%
! AGAAGCACGCCAACCCTGCA+TGG + chr4_3:5413656-5413675 None:intergenic 60.0%
! GCAGGGTTGGCGTGCTTCTA+TGG - chr4_3:5413657-5413676 Msa0626030:intron 60.0%
TGGGCCTAGCCACAAACCTG+TGG - chr4_3:5415120-5415139 Msa0626030:intron 60.0%
CGACCCCGCTTAGTGGGATA+AGG + chr4_3:5415437-5415456 None:intergenic 60.0%
TGTAGCCGACCCCGCTTAGT+GGG + chr4_3:5415443-5415462 None:intergenic 60.0%
ATGTAGCCGACCCCGCTTAG+TGG + chr4_3:5415444-5415463 None:intergenic 60.0%
TGATGCGCGGACAAAGAGGG+TGG - chr4_3:5415786-5415805 Msa0626030:intron 60.0%
! AACTGGAGGGTGATGGCCCT+GGG + chr4_3:5416306-5416325 None:intergenic 60.0%
! AAACTGGAGGGTGATGGCCC+TGG + chr4_3:5416307-5416326 None:intergenic 60.0%
CACGCCGTGCTTCCACAGTT+TGG + chr4_3:5417202-5417221 None:intergenic 60.0%
GCGTGTGTGGCTGTCATCAG+AGG - chr4_3:5417217-5417236 Msa0626030:CDS 60.0%
ACCGCCACTCCACCGCAAAA+TGG + chr4_3:5417553-5417572 None:intergenic 60.0%
TGAGTCGCACCGCCACGTAT+GGG + chr4_3:5417585-5417604 None:intergenic 60.0%
ATTCACGACAGGGTGGGGGT+GGG + chr4_3:5418088-5418107 None:intergenic 60.0%
AATTCACGACAGGGTGGGGG+TGG + chr4_3:5418089-5418108 None:intergenic 60.0%
TGGTTCACAAGGGGAGGGGA+GGG + chr4_3:5418965-5418984 None:intergenic 60.0%
TTGGTTCACAAGGGGAGGGG+AGG + chr4_3:5418966-5418985 None:intergenic 60.0%
AAGAGGGAAGGGGAGGGGAA+GGG + chr4_3:5419012-5419031 None:intergenic 60.0%
AAAGAGGGAAGGGGAGGGGA+AGG + chr4_3:5419013-5419032 None:intergenic 60.0%
GGTTCAATGGATGGGAGGGG+AGG + chr4_3:5419108-5419127 None:intergenic 60.0%
CATGTCCAGCCAGCAGCTTG+TGG - chr4_3:5419381-5419400 Msa0626030:intron 60.0%
AGGTGCTTGGCACCAACAGC+TGG - chr4_3:5419588-5419607 Msa0626030:intron 60.0%
TGCTTGGCACCAACAGCTGG+TGG - chr4_3:5419591-5419610 Msa0626030:intron 60.0%
! GCACCAACAGCTGGTGGTGA+GGG - chr4_3:5419597-5419616 Msa0626030:intron 60.0%
CATCCCTCACCACCAGCTGT+TGG + chr4_3:5419603-5419622 None:intergenic 60.0%
GCTTCAGACTGTTGTGCCGG+AGG + chr4_3:5419726-5419745 None:intergenic 60.0%
! GAAGCACTAGTGAGGGGAGG+TGG - chr4_3:5419828-5419847 Msa0626030:intron 60.0%
! CTGTGGAAGCACGGCGTGTG+TGG - chr4_3:5417204-5417223 Msa0626030:CDS 65.0%
TTTGCGGTGGAGTGGCGGTG+TGG - chr4_3:5417554-5417573 Msa0626030:intron 65.0%
CTGAGTCGCACCGCCACGTA+TGG + chr4_3:5417586-5417605 None:intergenic 65.0%
TTCACGACAGGGTGGGGGTG+GGG + chr4_3:5418087-5418106 None:intergenic 65.0%
ATGGAGGGGAGGGGAAGGGA+GGG + chr4_3:5419073-5419092 None:intergenic 65.0%
AATGGAGGGGAGGGGAAGGG+AGG + chr4_3:5419074-5419093 None:intergenic 65.0%
ATGGATGGGAGGGGAGGGGA+GGG + chr4_3:5419102-5419121 None:intergenic 65.0%
AATGGATGGGAGGGGAGGGG+AGG + chr4_3:5419103-5419122 None:intergenic 65.0%
! GGCACCAACAGCTGGTGGTG+AGG - chr4_3:5419596-5419615 Msa0626030:intron 65.0%
GGTGTGGCCGCACCCATACG+TGG - chr4_3:5417570-5417589 Msa0626030:intron 70.0%
GTGGCCGCACCCATACGTGG+CGG - chr4_3:5417573-5417592 Msa0626030:intron 70.0%
CGCACCGCCACGTATGGGTG+CGG + chr4_3:5417580-5417599 None:intergenic 70.0%
GGGAGGGGAAGGGAGGGGAA+GGG + chr4_3:5419067-5419086 None:intergenic 70.0%
TGGAGGGGAGGGGAAGGGAG+GGG + chr4_3:5419072-5419091 None:intergenic 70.0%
GGGGAGGGGAAGGGAGGGGA+AGG + chr4_3:5419068-5419087 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 5412501 5420590 5412501 ID=Msa0626030;Name=Msa0626030
chr4_3 mRNA 5412501 5420590 5412501 ID=Msa0626030-mRNA-1;Parent=Msa0626030;Name=Msa0626030-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|1|0.91|1|0.90|0.91|12|826|413
chr4_3 exon 5412501 5413542 5412501 ID=Msa0626030-mRNA-1:exon:1524;Parent=Msa0626030-mRNA-1
chr4_3 exon 5413662 5413716 5413662 ID=Msa0626030-mRNA-1:exon:1523;Parent=Msa0626030-mRNA-1
chr4_3 exon 5413813 5413865 5413813 ID=Msa0626030-mRNA-1:exon:1522;Parent=Msa0626030-mRNA-1
chr4_3 exon 5414537 5414613 5414537 ID=Msa0626030-mRNA-1:exon:1521;Parent=Msa0626030-mRNA-1
chr4_3 exon 5414760 5414883 5414760 ID=Msa0626030-mRNA-1:exon:1520;Parent=Msa0626030-mRNA-1
chr4_3 exon 5415791 5415916 5415791 ID=Msa0626030-mRNA-1:exon:1519;Parent=Msa0626030-mRNA-1
chr4_3 exon 5416706 5416783 5416706 ID=Msa0626030-mRNA-1:exon:1518;Parent=Msa0626030-mRNA-1
chr4_3 exon 5417163 5417316 5417163 ID=Msa0626030-mRNA-1:exon:1517;Parent=Msa0626030-mRNA-1
chr4_3 exon 5418076 5418184 5418076 ID=Msa0626030-mRNA-1:exon:1516;Parent=Msa0626030-mRNA-1
chr4_3 exon 5418483 5418546 5418483 ID=Msa0626030-mRNA-1:exon:1515;Parent=Msa0626030-mRNA-1
chr4_3 exon 5419404 5419526 5419404 ID=Msa0626030-mRNA-1:exon:1514;Parent=Msa0626030-mRNA-1
chr4_3 exon 5420528 5420590 5420528 ID=Msa0626030-mRNA-1:exon:1513;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5420528 5420590 5420528 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5419404 5419526 5419404 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5418483 5418546 5418483 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5418076 5418184 5418076 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5417163 5417316 5417163 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5416706 5416783 5416706 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5415791 5415916 5415791 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5414760 5414883 5414760 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5414537 5414613 5414537 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5413813 5413865 5413813 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5413662 5413716 5413662 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 CDS 5413327 5413542 5413327 ID=Msa0626030-mRNA-1:cds;Parent=Msa0626030-mRNA-1
chr4_3 three_prime_UTR 5412501 5413326 5412501 ID=Msa0626030-mRNA-1:three_prime_utr;Parent=Msa0626030-mRNA-1
Gene Sequence

>Msa0626030

TTCTTTCTTTCTTTACACACAAACATATCAATCAATAATCATCGCTTTCTCTCTCTCTCACGATTTGAGATGGGGATATATCTGAGTACCCCGAAAACAGAGAAGGCCTCTGAAGATGGTGAGAATGGCATGCTTCGCTATGGTTTGTCTTCCATGCAGGGTTGGCGTGCTTCTATGGAAGATGCTCATGCAGCTCATCCGTATTTGGACGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCATGGAGGTAAAGCTGTTTCAAAATTCTGTGCCAAGTTTCTACACCAGCAGGTGCTTAGGCATGAAGCTTATTTAGCTGGAGATATAGCCACATCTTTACAGAAATCTTTCCTAAGAATGGATGAGATGATGCGCGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAAAATGGAAAAGTTGTCTGGTATGCTTGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGAACGTGCCGATGAGTGGGCTTTTGAGGAGGGCCATCACCCTCCAGTTTCAAAGACCCAATATTGCGGGCTAATGAGAATATTGCAAGTTCAGAATTGCTGGACCAAGGGACCCCATTCTGATTTCAGTGGGCCAAACTGTGGAAGCACGGCGTGTGTGGCTGTCATCAGAGGAAACAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGTGTGTTATCAAGGAAAGGCCAGGCACACAATTTGTCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAAGACAGGATTCTAAAAGCTGGCGGTTTCATCCAAGTTGGACGAGTCAATGGAAGTTTGAATTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAGAATAAGTATTTGCCTGCTGAAAAGCAGGTTGTGACTGCTGATCCTGACGTAACTTCAGTTGAGCTTTGCGAAGATGATGAGTTTCTTGTGATAGCTTGTGATGGGATATGGGATTGCATGTCCAGCCAGCAGCTTGTGGACTTTATACATGGCCAGTTAAAGACGGAGAATAAACTTTCTGTGGTTTGTGAGAAAGTATTCGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAATCCTCTGACTTCAGATGCTTCTGTCACAGACCAGCCTGAGTCATCTGCTCAACCCACTCCTAATCCTCCGGCACAACAGTCTGAAGCTGACAGAAAGTTAGATTAA
Protein sequence

>Msa0626030

FFLSLHTNISINNHRFLSLSRFEMGIYLSTPKTEKASEDGENGMLRYGLSSMQGWRASMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKFLHQQVLRHEAYLAGDIATSLQKSFLRMDEMMRGQRGWRELAVLGDKMEKLSGMLEGFIWSPRSSEANERADEWAFEEGHHPPVSKTQYCGLMRILQVQNCWTKGPHSDFSGPNCGSTACVAVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQVVTADPDVTSVELCEDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSVVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNPLTSDASVTDQPESSAQPTPNPPAQQSEADRKLD*