Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387750 | XP_024635165.1 | 94.379 | 427 | 22 | 1 | 1 | 427 | 1 | 425 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387750 | A0A396IWM7 | 94.379 | 427 | 22 | 1 | 1 | 427 | 1 | 425 | 0.0 | 833 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012040 | Msa0387750 | 0.840190 | 1.009542e-57 | -8.615850e-47 |
| Msa0028660 | Msa0387750 | 0.802819 | 4.681061e-49 | -8.615850e-47 |
| Msa0065950 | Msa0387750 | 0.809969 | 1.454844e-50 | -8.615850e-47 |
| Msa0084940 | Msa0387750 | 0.800572 | 1.353186e-48 | -8.615850e-47 |
| Msa0096030 | Msa0387750 | 0.801167 | 1.023253e-48 | -8.615850e-47 |
| Msa0113750 | Msa0387750 | 0.815572 | 8.628994e-52 | -8.615850e-47 |
| Msa0115270 | Msa0387750 | 0.811819 | 5.786487e-51 | -8.615850e-47 |
| Msa0115390 | Msa0387750 | 0.800323 | 1.520869e-48 | -8.615850e-47 |
| Msa0116770 | Msa0387750 | 0.800765 | 1.235842e-48 | -8.615850e-47 |
| Msa0135380 | Msa0387750 | 0.803891 | 2.807063e-49 | -8.615850e-47 |
| Msa0159180 | Msa0387750 | 0.812085 | 5.063424e-51 | -8.615850e-47 |
| Msa0180500 | Msa0387750 | 0.805841 | 1.098411e-49 | -8.615850e-47 |
| Msa0194480 | Msa0387750 | 0.802498 | 5.453770e-49 | -8.615850e-47 |
| Msa0208220 | Msa0387750 | 0.805523 | 1.281095e-49 | -8.615850e-47 |
| Msa0208350 | Msa0387750 | 0.822514 | 2.274371e-53 | -8.615850e-47 |
| Msa0220440 | Msa0387750 | 0.808425 | 3.116968e-50 | -8.615850e-47 |
| Msa0223410 | Msa0387750 | -0.814701 | 1.347705e-51 | -8.615850e-47 |
| Msa0226890 | Msa0387750 | 0.808147 | 3.571867e-50 | -8.615850e-47 |
| Msa0229740 | Msa0387750 | 0.914562 | 1.657884e-84 | -8.615850e-47 |
| Msa0369220 | Msa0387750 | 0.815950 | 7.110474e-52 | -8.615850e-47 |
| Msa0372340 | Msa0387750 | 0.813644 | 2.305876e-51 | -8.615850e-47 |
| Msa0387750 | Msa0404030 | 0.823347 | 1.454366e-53 | -8.615850e-47 |
| Msa0387750 | Msa0420960 | 0.847694 | 9.832262e-60 | -8.615850e-47 |
| Msa0387750 | Msa0432770 | 0.810622 | 1.051884e-50 | -8.615850e-47 |
| Msa0387750 | Msa0433640 | 0.811867 | 5.646605e-51 | -8.615850e-47 |
| Msa0387750 | Msa0442190 | 0.819396 | 1.187029e-52 | -8.615850e-47 |
| Msa0387750 | Msa0442200 | 0.804029 | 2.628387e-49 | -8.615850e-47 |
| Msa0387750 | Msa0467060 | 0.805645 | 1.208101e-49 | -8.615850e-47 |
| Msa0387750 | Msa0508870 | 0.800328 | 1.517728e-48 | -8.615850e-47 |
| Msa0387750 | Msa0519000 | 0.811635 | 6.344748e-51 | -8.615850e-47 |
| Msa0387750 | Msa0521500 | 0.810621 | 1.052120e-50 | -8.615850e-47 |
| Msa0387750 | Msa0541360 | 0.813008 | 3.180269e-51 | -8.615850e-47 |
| Msa0387750 | Msa0545080 | 0.813461 | 2.530476e-51 | -8.615850e-47 |
| Msa0387750 | Msa0609410 | -0.813804 | 2.126753e-51 | -8.615850e-47 |
| Msa0387750 | Msa0610430 | 0.829000 | 6.574047e-55 | -8.615850e-47 |
| Msa0387750 | Msa0615490 | 0.803420 | 3.515543e-49 | -8.615850e-47 |
| Msa0387750 | Msa0626030 | 0.802038 | 6.779813e-49 | -8.615850e-47 |
| Msa0387750 | Msa0649350 | 0.805035 | 1.621201e-49 | -8.615850e-47 |
| Msa0387750 | Msa0650190 | 0.809009 | 2.338295e-50 | -8.615850e-47 |
| Msa0387750 | Msa0663390 | 0.802596 | 5.205205e-49 | -8.615850e-47 |
| Msa0387750 | Msa0663920 | 0.822861 | 1.888514e-53 | -8.615850e-47 |
| Msa0387750 | Msa0688960 | 0.810645 | 1.039864e-50 | -8.615850e-47 |
| Msa0387750 | Msa0692830 | 0.813227 | 2.847999e-51 | -8.615850e-47 |
| Msa0387750 | Msa0692950 | 0.817812 | 2.715802e-52 | -8.615850e-47 |
| Msa0387750 | Msa0711790 | 0.800183 | 1.624140e-48 | -8.615850e-47 |
| Msa0387750 | Msa0716840 | 0.825868 | 3.707588e-54 | -8.615850e-47 |
| Msa0387750 | Msa0743720 | 0.812636 | 3.837520e-51 | -8.615850e-47 |
| Msa0387750 | Msa0816730 | 0.804705 | 1.900531e-49 | -8.615850e-47 |
| Msa0387750 | Msa0824680 | 0.817331 | 3.486048e-52 | -8.615850e-47 |
| Msa0387750 | Msa0833460 | 0.804548 | 2.049280e-49 | -8.615850e-47 |
| Msa0387750 | Msa0844570 | 0.810887 | 9.218909e-51 | -8.615850e-47 |
| Msa0387750 | Msa0909110 | 0.817130 | 3.868280e-52 | -8.615850e-47 |
| Msa0387750 | Msa0992490 | -0.804002 | 2.661889e-49 | -8.615850e-47 |
| Msa0387750 | Msa0999430 | 0.812033 | 5.195346e-51 | -8.615850e-47 |
| Msa0387750 | Msa0999970 | 0.824177 | 9.294315e-54 | -8.615850e-47 |
| Msa0387750 | Msa1009820 | 0.802821 | 4.676267e-49 | -8.615850e-47 |
| Msa0387750 | Msa1014730 | 0.803978 | 2.692564e-49 | -8.615850e-47 |
| Msa0387750 | Msa1021540 | 0.808045 | 3.755018e-50 | -8.615850e-47 |
| Msa0387750 | Msa1023920 | 0.809377 | 1.950141e-50 | -8.615850e-47 |
| Msa0387750 | Msa1037420 | 0.804208 | 2.411799e-49 | -8.615850e-47 |
| Msa0387750 | Msa1046020 | 0.809863 | 1.533653e-50 | -8.615850e-47 |
| Msa0387750 | Msa1046060 | 0.817425 | 3.320435e-52 | -8.615850e-47 |
| Msa0387750 | Msa1051200 | 0.821435 | 4.044110e-53 | -8.615850e-47 |
| Msa0387750 | Msa1082500 | 0.812535 | 4.036617e-51 | -8.615850e-47 |
| Msa0387750 | Msa1091940 | 0.807586 | 4.701503e-50 | -8.615850e-47 |
| Msa0387750 | Msa1107900 | 0.801640 | 8.186346e-49 | -8.615850e-47 |
| Msa0387750 | Msa1116130 | -0.806768 | 7.006777e-50 | -8.615850e-47 |
| Msa0387750 | Msa1137700 | 0.815748 | 7.886522e-52 | -8.615850e-47 |
| Msa0387750 | Msa1143930 | -0.814804 | 1.278522e-51 | -8.615850e-47 |
| Msa0387750 | Msa1171870 | 0.826548 | 2.553245e-54 | -8.615850e-47 |
| Msa0387750 | Msa1185170 | 0.804096 | 2.545477e-49 | -8.615850e-47 |
| Msa0387750 | Msa1217430 | -0.802186 | 6.322732e-49 | -8.615850e-47 |
| Msa0387750 | Msa1224810 | 0.807194 | 5.694359e-50 | -8.615850e-47 |
| Msa0387750 | Msa1244610 | 0.813023 | 3.156677e-51 | -8.615850e-47 |
| Msa0387750 | Msa1253020 | 0.806917 | 6.516616e-50 | -8.615850e-47 |
| Msa0387750 | Msa1275360 | 0.817746 | 2.810417e-52 | -8.615850e-47 |
| Msa0387750 | Msa1284680 | 0.801341 | 9.423738e-49 | -8.615850e-47 |
| Msa0387750 | Msa1302190 | -0.806366 | 8.517715e-50 | -8.615850e-47 |
| Msa0387750 | Msa1305340 | 0.810063 | 1.388731e-50 | -8.615850e-47 |
| Msa0387750 | Msa1306430 | 0.826976 | 2.018454e-54 | -8.615850e-47 |
| Msa0387750 | Msa1306860 | 0.805212 | 1.488355e-49 | -8.615850e-47 |
| Msa0387750 | Msa1340470 | 0.801846 | 7.424886e-49 | -8.615850e-47 |
| Msa0387750 | Msa1409880 | 0.807898 | 4.035362e-50 | -8.615850e-47 |
| Msa0387750 | Msa1410100 | 0.818327 | 2.076912e-52 | -8.615850e-47 |
| Msa0387750 | Msa1415640 | 0.810653 | 1.035850e-50 | -8.615850e-47 |
| Msa0387750 | Msa1416150 | 0.804557 | 2.040438e-49 | -8.615850e-47 |
| Msa0387750 | Msa1438700 | 0.810863 | 9.329715e-51 | -8.615850e-47 |
| Msa0387750 | Msa1451550 | 0.800269 | 1.559740e-48 | -8.615850e-47 |
| Msa0387750 | Msa1465850 | 0.805031 | 1.624089e-49 | -8.615850e-47 |
| Msa0255080 | Msa0387750 | 0.813025 | 3.153712e-51 | -8.615850e-47 |
| Msa0264150 | Msa0387750 | 0.809714 | 1.650453e-50 | -8.615850e-47 |
| Msa0289250 | Msa0387750 | 0.804669 | 1.933737e-49 | -8.615850e-47 |
| Msa0298700 | Msa0387750 | 0.819735 | 9.934959e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387750 | MtrunA17_Chr3g0120781 | 94.379 | 427 | 22 | 1 | 1 | 427 | 1 | 425 | 0.0 | 833 |
| Msa0387750 | MtrunA17_Chr6g0466721 | 78.841 | 397 | 78 | 2 | 31 | 427 | 2 | 392 | 0.0 | 647 |
| Msa0387750 | MtrunA17_Chr3g0120771 | 65.289 | 484 | 109 | 8 | 1 | 427 | 1 | 482 | 0.0 | 601 |
| Msa0387750 | MtrunA17_Chr6g0466711 | 89.888 | 89 | 9 | 0 | 257 | 345 | 1 | 89 | 4.74e-53 | 172 |
| Msa0387750 | MtrunA17_Chr6g0466701 | 69.231 | 117 | 36 | 0 | 24 | 140 | 4 | 120 | 7.64e-51 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387750 | AT4G25330.1 | 33.333 | 204 | 127 | 3 | 21 | 223 | 14 | 209 | 4.83e-31 | 119 |
Find 90 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACAAGAAGCTTGCATTTC+TGG | 0.094771 | 3_1:-91816440 | Msa0387750:CDS |
| ATAACATATATATACTTAAA+TGG | 0.181728 | 3_1:+91816249 | None:intergenic |
| TGAAGGCCTACCTCAGATTT+AGG | 0.217628 | 3_1:+91817363 | None:intergenic |
| GCAGTCAACTTTCCTTCATT+TGG | 0.248052 | 3_1:+91819005 | None:intergenic |
| GAAGATGTTATGATGTAATT+TGG | 0.259481 | 3_1:+91817757 | None:intergenic |
| TCCAGCTGTGGCTTTGTTCT+TGG | 0.265674 | 3_1:-91818934 | Msa0387750:CDS |
| ACCTGTTTCCGTTCAAGTTC+AGG | 0.273946 | 3_1:-91823057 | Msa0387750:CDS |
| GGAAGCTTGTTAAGGATGTT+AGG | 0.310877 | 3_1:-91823022 | Msa0387750:CDS |
| AATGCAAATGTCACCAATTT+CGG | 0.311234 | 3_1:+91818980 | None:intergenic |
| TTTATCCTGTCCTGGTTACA+TGG | 0.325135 | 3_1:-91819029 | Msa0387750:CDS |
| TTATCTTCCATGCTTTCGTC+AGG | 0.351621 | 3_1:+91817997 | None:intergenic |
| TCAACTCGGTGTAGTGTAGA+AGG | 0.365333 | 3_1:+91823377 | None:intergenic |
| GCTTCTTGTGCAGCCGCACT+TGG | 0.370760 | 3_1:+91816452 | None:intergenic |
| ATCACAATCTGGACAGGAAT+TGG | 0.382289 | 3_1:-91818889 | Msa0387750:CDS |
| TCCTGAACTTGAACGGAAAC+AGG | 0.382857 | 3_1:+91823056 | None:intergenic |
| TACTTAAATGGGAAATAATC+TGG | 0.387959 | 3_1:+91816261 | None:intergenic |
| AAGTTGACTGCTGCCGAAAT+TGG | 0.405877 | 3_1:-91818993 | Msa0387750:CDS |
| TTGTTCAGTGTGCAACATAA+TGG | 0.408316 | 3_1:+91817813 | None:intergenic |
| TGTGTACCTTTATCCTGTCC+TGG | 0.409349 | 3_1:-91819037 | Msa0387750:CDS |
| TATGGTTACGTTGGAGGAAA+AGG | 0.420140 | 3_1:-91823189 | Msa0387750:CDS |
| AATTTGAAGGTTGTACATTC+AGG | 0.426606 | 3_1:-91816535 | Msa0387750:CDS |
| AAGAACTCTACAGCTGTTGA+TGG | 0.426928 | 3_1:+91817910 | None:intergenic |
| TACACTACACCGAGTTGAAA+TGG | 0.428263 | 3_1:-91823372 | Msa0387750:exon |
| CTTTGTTCTTGGAGATTACA+AGG | 0.432464 | 3_1:-91818923 | Msa0387750:CDS |
| TAACATATATATACTTAAAT+GGG | 0.444390 | 3_1:+91816250 | None:intergenic |
| GGCACCCACAACAGATCGTT+TGG | 0.446503 | 3_1:+91818653 | None:intergenic |
| ATGTAACCAGGACAGGATAA+AGG | 0.447391 | 3_1:+91819031 | None:intergenic |
| AAACAAACCTTCAGGAGAAC+AGG | 0.449635 | 3_1:+91818632 | None:intergenic |
| CGGTGCATGGTACACCGTTA+TGG | 0.449853 | 3_1:-91823207 | Msa0387750:CDS |
| GTGGGTGCCTGTTCTCCTGA+AGG | 0.452638 | 3_1:-91818639 | Msa0387750:intron |
| TCATAGAAGCGAAGATCATC+AGG | 0.457906 | 3_1:+91822975 | None:intergenic |
| TACATCATAACATCTTCAAC+TGG | 0.462959 | 3_1:-91817751 | Msa0387750:CDS |
| TGAATGTCGGAAGCTTGTTA+AGG | 0.464946 | 3_1:-91823030 | Msa0387750:CDS |
| TCCAAGAACAAAGCCACAGC+TGG | 0.465807 | 3_1:+91818933 | None:intergenic |
| ATTTCTCTCTTCGCCGGCGT+CGG | 0.467245 | 3_1:+91823290 | None:intergenic |
| GAAGATATTGTCTTCTTCAT+CGG | 0.481912 | 3_1:+91823136 | None:intergenic |
| TTCATTTGGCCCATGTAACC+AGG | 0.482362 | 3_1:+91819019 | None:intergenic |
| GAAGCTTGTTAAGGATGTTA+GGG | 0.482915 | 3_1:-91823021 | Msa0387750:CDS |
| TAGAAGGAGTAGCAATTTGA+AGG | 0.484742 | 3_1:-91816548 | Msa0387750:CDS |
| TGGTTACATGGGCCAAATGA+AGG | 0.494473 | 3_1:-91819017 | Msa0387750:CDS |
| AAAAGGAAACACTTCGAGTA+AGG | 0.495048 | 3_1:-91823172 | Msa0387750:CDS |
| TATATCTCCAATGATAAACT+TGG | 0.495829 | 3_1:+91817847 | None:intergenic |
| CACCGTTATGGTTACGTTGG+AGG | 0.498761 | 3_1:-91823195 | Msa0387750:CDS |
| TCAAGATTGCCAATGCTAAG+AGG | 0.501498 | 3_1:-91816501 | Msa0387750:CDS |
| CACAGGATGGAAACAATAGA+AGG | 0.503654 | 3_1:-91816564 | Msa0387750:CDS |
| TGTCTTTCAGAATGCATCAC+AGG | 0.505039 | 3_1:-91816581 | Msa0387750:intron |
| GTTTCTCTGCCATTTCAACT+CGG | 0.507063 | 3_1:+91823363 | None:intergenic |
| CAAGATTGCCAATGCTAAGA+GGG | 0.507498 | 3_1:-91816500 | Msa0387750:CDS |
| AATGTGTGTATGATTCTGAT+AGG | 0.508534 | 3_1:-91817955 | Msa0387750:CDS |
| CGCGCCAAACGATCTGTTGT+GGG | 0.514658 | 3_1:-91818657 | Msa0387750:CDS |
| ATTCTTCGAAACTCCGACGC+CGG | 0.520295 | 3_1:-91823303 | Msa0387750:CDS |
| TTCCTCCAACGTAACCATAA+CGG | 0.536523 | 3_1:+91823193 | None:intergenic |
| GTGCAACATAATGGCACCCC+TGG | 0.537920 | 3_1:+91817822 | None:intergenic |
| TATCTTCCATGCTTTCGTCA+GGG | 0.539922 | 3_1:+91817998 | None:intergenic |
| TTGGCCCATGTAACCAGGAC+AGG | 0.541376 | 3_1:+91819024 | None:intergenic |
| AGGAGACTAGAATCACAATC+TGG | 0.543384 | 3_1:-91818900 | Msa0387750:CDS |
| TATTCATGAAATCTGAAACT+AGG | 0.544715 | 3_1:-91816410 | Msa0387750:exon |
| ACCCGCATTTCTCTCTTCGC+CGG | 0.544935 | 3_1:+91823284 | None:intergenic |
| AAACAAATCCCTCTTAGCAT+TGG | 0.546189 | 3_1:+91816492 | None:intergenic |
| TTCATAATCCTGAACTTGAA+CGG | 0.546295 | 3_1:+91823049 | None:intergenic |
| TTATCCTGTCCTGGTTACAT+GGG | 0.548307 | 3_1:-91819028 | Msa0387750:CDS |
| GCCGGCGAAGAGAGAAATGC+GGG | 0.550980 | 3_1:-91823285 | Msa0387750:CDS |
| ACTAGAATCACAATCTGGAC+AGG | 0.563849 | 3_1:-91818895 | Msa0387750:CDS |
| GAAACTACGAAGACGGTGCA+TGG | 0.564040 | 3_1:-91823220 | Msa0387750:CDS |
| TTGGTTGTGATCTGCCACAA+AGG | 0.566812 | 3_1:-91818870 | Msa0387750:CDS |
| TCATAACATCTTCAACTGGC+AGG | 0.571205 | 3_1:-91817747 | Msa0387750:intron |
| AAATGGGAAATAATCTGGTA+CGG | 0.574331 | 3_1:+91816266 | None:intergenic |
| AAGCATGGAAGATAAAGAGT+TGG | 0.577522 | 3_1:-91817989 | Msa0387750:CDS |
| AGTCAGCCCTGACGAAAGCA+TGG | 0.581574 | 3_1:-91818004 | Msa0387750:CDS |
| CTATGATGCTGTTGTTGACG+CGG | 0.583376 | 3_1:-91822958 | Msa0387750:intron |
| ACGCGCCAAACGATCTGTTG+TGG | 0.589617 | 3_1:-91818658 | Msa0387750:CDS |
| CAACTCGGTGTAGTGTAGAA+GGG | 0.603978 | 3_1:+91823378 | None:intergenic |
| ATCATTGGAGATATATACCA+GGG | 0.613270 | 3_1:-91817839 | Msa0387750:CDS |
| AAGTTCAGGATTATGAATGT+CGG | 0.614070 | 3_1:-91823043 | Msa0387750:CDS |
| TATCATTGGAGATATATACC+AGG | 0.616124 | 3_1:-91817840 | Msa0387750:CDS |
| CGGAGTTTCGAAGAATGAAA+CGG | 0.617296 | 3_1:+91823310 | None:intergenic |
| ATGTGTGTATGATTCTGATA+GGG | 0.622574 | 3_1:-91817954 | Msa0387750:CDS |
| TTTCAGAATGCATCACAGGA+TGG | 0.624598 | 3_1:-91816577 | Msa0387750:intron |
| TGCCACACCATGTTTCACAC+TGG | 0.624600 | 3_1:+91816293 | None:intergenic |
| AACACTGTTTCCTAAATCTG+AGG | 0.629543 | 3_1:-91817373 | Msa0387750:intron |
| ACAAAATCAAAATTACGTCA+CGG | 0.643932 | 3_1:-91823249 | Msa0387750:CDS |
| AAAAGAGCACGATCCAGCTG+TGG | 0.646327 | 3_1:-91818946 | Msa0387750:CDS |
| GTACACCGTTATGGTTACGT+TGG | 0.652740 | 3_1:-91823198 | Msa0387750:CDS |
| GAATTTCGAAACTACGAAGA+CGG | 0.658399 | 3_1:-91823227 | Msa0387750:CDS |
| AATTTGCTGATCACCAAGTG+CGG | 0.680550 | 3_1:-91816465 | Msa0387750:CDS |
| GGCGGATCCAGTGTGAAACA+TGG | 0.683700 | 3_1:-91816300 | Msa0387750:three_prime_UTR |
| CGCCGGCGAAGAGAGAAATG+CGG | 0.696234 | 3_1:-91823286 | Msa0387750:CDS |
| ATCCAGTGTGAAACATGGTG+TGG | 0.712406 | 3_1:-91816295 | Msa0387750:three_prime_UTR |
| TCATTGGAGATATATACCAG+GGG | 0.719859 | 3_1:-91817838 | Msa0387750:CDS |
| TGTTCTTGGAGATTACAAGG+AGG | 0.739840 | 3_1:-91818920 | Msa0387750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATGAAGTTAAATATTA+AGG | - | chr3_1:91816870-91816889 | Msa0387750:intron | 10.0% |
| !!! | TAAAATCAATTATATTTTAG+AGG | - | chr3_1:91817626-91817645 | Msa0387750:intron | 10.0% |
| !! | ATAAAAAATAAATATCAGAA+AGG | + | chr3_1:91821151-91821170 | None:intergenic | 10.0% |
| !!! | ATTTAAAATAGAGATTTATA+CGG | + | chr3_1:91821342-91821361 | None:intergenic | 10.0% |
| !! | AAAGAACTAAATTTAATTAA+GGG | + | chr3_1:91823050-91823069 | None:intergenic | 10.0% |
| !! | GTATGATTAAAAAAAAATAC+CGG | - | chr3_1:91816963-91816982 | Msa0387750:intron | 15.0% |
| !!! | TAGTTTTCAATCATAATTTA+AGG | - | chr3_1:91817745-91817764 | Msa0387750:intron | 15.0% |
| !! | TAATTGAATGCATATATTAA+TGG | - | chr3_1:91817791-91817810 | Msa0387750:CDS | 15.0% |
| !! | AATTGAATGCATATATTAAT+GGG | - | chr3_1:91817792-91817811 | Msa0387750:CDS | 15.0% |
| !! | AAATACTTGTATTAATTGAT+TGG | - | chr3_1:91817816-91817835 | Msa0387750:CDS | 15.0% |
| !! | AATACTTGTATTAATTGATT+GGG | - | chr3_1:91817817-91817836 | Msa0387750:CDS | 15.0% |
| !!! | ATAAAGATATTTTATGCATA+AGG | - | chr3_1:91818483-91818502 | Msa0387750:intron | 15.0% |
| !! | GAAGTAAAATTTACTAAAAA+AGG | + | chr3_1:91820534-91820553 | None:intergenic | 15.0% |
| !! | AATAAAAACTAAAACCAAAA+TGG | - | chr3_1:91820834-91820853 | Msa0387750:intron | 15.0% |
| !! | ATAAAAACTAAAACCAAAAT+GGG | - | chr3_1:91820835-91820854 | Msa0387750:intron | 15.0% |
| !! | AAATAAAAAATGAAAAAGTG+AGG | + | chr3_1:91821652-91821671 | None:intergenic | 15.0% |
| !!! | TCCAAAAAAAATATTTTACA+GGG | + | chr3_1:91822976-91822995 | None:intergenic | 15.0% |
| !!! | ATCCAAAAAAAATATTTTAC+AGG | + | chr3_1:91822975-91822994 | None:intergenic | 15.0% |
| !! | CTTGTAATTTGAAAAAAATT+TGG | + | chr3_1:91822866-91822885 | None:intergenic | 15.0% |
| !!! | AATTTTTTTCAAATTACAAG+AGG | - | chr3_1:91822866-91822885 | Msa0387750:intron | 15.0% |
| !!! | ATTTTTTTCAAATTACAAGA+GGG | - | chr3_1:91822867-91822886 | Msa0387750:intron | 15.0% |
| !!! | CTTGAAATTTGAAAATATTT+TGG | + | chr3_1:91822949-91822968 | None:intergenic | 15.0% |
| !!! | CAAAATATTTTCAAATTTCA+AGG | - | chr3_1:91822947-91822966 | Msa0387750:intron | 15.0% |
| !!! | ATCCAAAAAAAATATTTTAC+AGG | - | chr3_1:91822975-91822994 | Msa0387750:CDS | 15.0% |
| !!! | TCCAAAAAAAATATTTTACA+GGG | - | chr3_1:91822976-91822995 | Msa0387750:CDS | 15.0% |
| !! | CAAAGAACTAAATTTAATTA+AGG | + | chr3_1:91823051-91823070 | None:intergenic | 15.0% |
| !!! | ATTAAAAAAAAATACCGGTT+TGG | - | chr3_1:91816968-91816987 | Msa0387750:intron | 20.0% |
| !!! | TTTTTTCAATTAAGATTGCA+CGG | + | chr3_1:91817103-91817122 | None:intergenic | 20.0% |
| !! | ATACTTGTATTAATTGATTG+GGG | - | chr3_1:91817818-91817837 | Msa0387750:CDS | 20.0% |
| !! | ATGAACTTCAATAATATGAT+TGG | + | chr3_1:91817863-91817882 | None:intergenic | 20.0% |
| !!! | TATTTTCTGCATAAAGTTTA+AGG | - | chr3_1:91817921-91817940 | Msa0387750:CDS | 20.0% |
| !!! | AATATTGAAGTTAAGTATTG+TGG | - | chr3_1:91818258-91818277 | Msa0387750:intron | 20.0% |
| !! | TAAGTAGATACGTATATTAA+TGG | - | chr3_1:91818450-91818469 | Msa0387750:intron | 20.0% |
| !! | AAGTAGATACGTATATTAAT+GGG | - | chr3_1:91818451-91818470 | Msa0387750:intron | 20.0% |
| !! | GCATAAAGTTCAAAATTAAT+TGG | - | chr3_1:91818498-91818517 | Msa0387750:intron | 20.0% |
| !!! | AAAACACTTTTATTGCTAAA+TGG | - | chr3_1:91818585-91818604 | Msa0387750:intron | 20.0% |
| !! | TGAATTATTGAGATTACAAT+AGG | - | chr3_1:91819933-91819952 | Msa0387750:intron | 20.0% |
| !! | TATGTAAATGCCTATATTAA+TGG | - | chr3_1:91820161-91820180 | Msa0387750:intron | 20.0% |
| !! | ATGTAAATGCCTATATTAAT+GGG | - | chr3_1:91820162-91820181 | Msa0387750:intron | 20.0% |
| !! | TAAGTAAATGCATGTATTAA+TGG | - | chr3_1:91820346-91820365 | Msa0387750:intron | 20.0% |
| !! | AAGTAAATGCATGTATTAAT+GGG | - | chr3_1:91820347-91820366 | Msa0387750:intron | 20.0% |
| !!! | GAAATTGTGAATGTTTTTAT+AGG | - | chr3_1:91820573-91820592 | Msa0387750:intron | 20.0% |
| !!! | TTTTAGTTTTTATTCCTTTG+TGG | + | chr3_1:91820828-91820847 | None:intergenic | 20.0% |
| !! | TTTCTCAACATACAAAATAA+CGG | + | chr3_1:91820931-91820950 | None:intergenic | 20.0% |
| !! | AAAATTCTATGTAATAGTAG+AGG | - | chr3_1:91821074-91821093 | Msa0387750:intron | 20.0% |
| !! | TAAAATTTGATTCAACTCAT+TGG | - | chr3_1:91821104-91821123 | Msa0387750:intron | 20.0% |
| !! | AAAATTTGATTCAACTCATT+GGG | - | chr3_1:91821105-91821124 | Msa0387750:intron | 20.0% |
| !! | TATTTATTTACTATACCTGT+AGG | - | chr3_1:91821268-91821287 | Msa0387750:intron | 20.0% |
| !!! | AGTTGATGAATATGATAAAT+GGG | + | chr3_1:91821548-91821567 | None:intergenic | 20.0% |
| !!! | AAGTTGATGAATATGATAAA+TGG | + | chr3_1:91821549-91821568 | None:intergenic | 20.0% |
| !! | TTTATCATATTCATCAACTT+TGG | - | chr3_1:91821549-91821568 | Msa0387750:intron | 20.0% |
| !! | CCTTGTTAAAATAATAACTT+AGG | + | chr3_1:91822076-91822095 | None:intergenic | 20.0% |
| !!! | CCTAAGTTATTATTTTAACA+AGG | - | chr3_1:91822073-91822092 | Msa0387750:intron | 20.0% |
| !!! | AATAATTTTGTAAGTGTTGT+GGG | + | chr3_1:91822139-91822158 | None:intergenic | 20.0% |
| !!! | TAATAATTTTGTAAGTGTTG+TGG | + | chr3_1:91822140-91822159 | None:intergenic | 20.0% |
| !! | CAACACTTACAAAATTATTA+TGG | - | chr3_1:91822140-91822159 | Msa0387750:intron | 20.0% |
| !!! | AAAAATATCAAAGCATCAAT+AGG | - | chr3_1:91822285-91822304 | Msa0387750:intron | 20.0% |
| !!! | AATACAAATAACGTTTCTTT+TGG | + | chr3_1:91822456-91822475 | None:intergenic | 20.0% |
| !! | ACATTTATCAATCTTATACT+TGG | - | chr3_1:91822487-91822506 | Msa0387750:intron | 20.0% |
| !! | ATTAAAACTACAAAGTTATC+TGG | + | chr3_1:91822580-91822599 | None:intergenic | 20.0% |
| !!! | CAAAAAAAATATTTTACAGG+GGG | + | chr3_1:91822978-91822997 | None:intergenic | 20.0% |
| !!! | CCAAAAAAAATATTTTACAG+GGG | + | chr3_1:91822977-91822996 | None:intergenic | 20.0% |
| !!! | AATTTGAAGATTTTTGGTTT+TGG | - | chr3_1:91822758-91822777 | Msa0387750:intron | 20.0% |
| !!! | TTTTTTTCAAATTACAAGAG+GGG | - | chr3_1:91822868-91822887 | Msa0387750:intron | 20.0% |
| !!! | CCAAAAAAAATATTTTACAG+GGG | - | chr3_1:91822977-91822996 | Msa0387750:CDS | 20.0% |
| !!! | CAAAAAAAATATTTTACAGG+GGG | - | chr3_1:91822978-91822997 | Msa0387750:CDS | 20.0% |
| !!! | AAAAAAAATATTTTACAGGG+GGG | - | chr3_1:91822979-91822998 | Msa0387750:CDS | 20.0% |
| !!! | ATTTTGATTTTGTTCAGGAA+CGG | + | chr3_1:91816425-91816444 | None:intergenic | 25.0% |
| !!! | ACGTAATTTTGATTTTGTTC+AGG | + | chr3_1:91816430-91816449 | None:intergenic | 25.0% |
| ! | ACAAAATCAAAATTACGTCA+CGG | - | chr3_1:91816432-91816451 | Msa0387750:CDS | 25.0% |
| ! | AAAAAAGCAGTAAAAACAGA+AGG | + | chr3_1:91816765-91816784 | None:intergenic | 25.0% |
| ! | GAAATGCTAAAAACTCAAAA+CGG | + | chr3_1:91816794-91816813 | None:intergenic | 25.0% |
| ! | GAAGTTAAATATTAAGGCAA+TGG | - | chr3_1:91816876-91816895 | Msa0387750:intron | 25.0% |
| ! | AAAAATATGGGATAGTTGAT+TGG | + | chr3_1:91817274-91817293 | None:intergenic | 25.0% |
| ! | CTCTGTTTGGTAAAAAATAT+GGG | + | chr3_1:91817286-91817305 | None:intergenic | 25.0% |
| !!! | GTCAATTCTAGAATCAATTT+CGG | - | chr3_1:91817665-91817684 | Msa0387750:intron | 25.0% |
| ! | TACTTGTATTAATTGATTGG+GGG | - | chr3_1:91817819-91817838 | Msa0387750:CDS | 25.0% |
| !!! | CATCTAAATTTTCTAAAGCT+AGG | + | chr3_1:91817952-91817971 | None:intergenic | 25.0% |
| !!! | TTAAAGTTTTAGCTATGAGT+TGG | - | chr3_1:91818038-91818057 | Msa0387750:intron | 25.0% |
| !!! | TACTTTTTCACATTCATTTC+TGG | - | chr3_1:91818327-91818346 | Msa0387750:intron | 25.0% |
| ! | CAAGTATTTACACAAAACTA+TGG | + | chr3_1:91818412-91818431 | None:intergenic | 25.0% |
| !! | GTTTAAGATTAAGATGAAGT+TGG | - | chr3_1:91818523-91818542 | Msa0387750:intron | 25.0% |
| !! | AGTAACAATTCTAATTTTCC+TGG | + | chr3_1:91818822-91818841 | None:intergenic | 25.0% |
| !!! | TCATTTTTACGCTTTTCTAA+TGG | + | chr3_1:91819020-91819039 | None:intergenic | 25.0% |
| ! | AATAGAATTCCAACTTCTAT+GGG | - | chr3_1:91819167-91819186 | Msa0387750:intron | 25.0% |
| ! | TCTACTATCTCATTAATTAG+TGG | + | chr3_1:91819209-91819228 | None:intergenic | 25.0% |
| !! | TTCTACTAAATTTGAAGCAT+GGG | + | chr3_1:91819578-91819597 | None:intergenic | 25.0% |
| !! | TTTCTACTAAATTTGAAGCA+TGG | + | chr3_1:91819579-91819598 | None:intergenic | 25.0% |
| ! | TTACCAAATAATGATGAAGT+TGG | - | chr3_1:91819653-91819672 | Msa0387750:intron | 25.0% |
| !!! | CTAGTTTTCTAATATGGTAA+TGG | + | chr3_1:91819863-91819882 | None:intergenic | 25.0% |
| ! | ATGTATCTACCCATTAATAT+AGG | + | chr3_1:91820174-91820193 | None:intergenic | 25.0% |
| ! | GGCAATACAAACATTTAATT+TGG | + | chr3_1:91820259-91820278 | None:intergenic | 25.0% |
| ! | ATGCATACAATATCTTTACA+TGG | + | chr3_1:91820378-91820397 | None:intergenic | 25.0% |
| !!! | ATTGTGAATGTTTTTATAGG+TGG | - | chr3_1:91820576-91820595 | Msa0387750:intron | 25.0% |
| !!! | ATTTTTCGAAAGAATGCAAA+AGG | - | chr3_1:91820858-91820877 | Msa0387750:intron | 25.0% |
| !!! | AAAATAACGGAAAGTACTTT+GGG | + | chr3_1:91820918-91820937 | None:intergenic | 25.0% |
| !!! | AATTTTAGAAACAAACCTTC+AGG | + | chr3_1:91821060-91821079 | None:intergenic | 25.0% |
| ! | TAGAGAAAAATTGATAAGTC+AGG | + | chr3_1:91821465-91821484 | None:intergenic | 25.0% |
| ! | AAAATGAAAAAGTGAGGAAA+AGG | + | chr3_1:91821646-91821665 | None:intergenic | 25.0% |
| !! | CATTTTTCCAAGTTTATCAT+TGG | - | chr3_1:91821827-91821846 | Msa0387750:intron | 25.0% |
| ! | TATATCTCCAATGATAAACT+TGG | + | chr3_1:91821837-91821856 | None:intergenic | 25.0% |
| ! | GAAGATGTTATGATGTAATT+TGG | + | chr3_1:91821927-91821946 | None:intergenic | 25.0% |
| !!! | ATTTTGATGAATAGCTTACT+TGG | - | chr3_1:91822001-91822020 | Msa0387750:intron | 25.0% |
| !! | TTTTGATGAATAGCTTACTT+GGG | - | chr3_1:91822002-91822021 | Msa0387750:intron | 25.0% |
| !! | GAGGAAATAAATTTGTTTGA+AGG | + | chr3_1:91822338-91822357 | None:intergenic | 25.0% |
| ! | TCCTCCAAAGAATAATTTAA+CGG | - | chr3_1:91822364-91822383 | Msa0387750:intron | 25.0% |
| !!! | CCCCTGTAAAATATTTTTTT+TGG | - | chr3_1:91822722-91822741 | Msa0387750:intron | 25.0% |
| ! | ACAGTACAAAATCAAAGATA+TGG | - | chr3_1:91822797-91822816 | Msa0387750:intron | 25.0% |
| !! | CTAAATTTGCTCAAATTACA+GGG | - | chr3_1:91822896-91822915 | Msa0387750:intron | 25.0% |
| !! | TAAATTTGCTCAAATTACAG+GGG | - | chr3_1:91822897-91822916 | Msa0387750:intron | 25.0% |
| !!! | CCCCTGTAAAATATTTTTTT+TGG | + | chr3_1:91822722-91822741 | None:intergenic | 25.0% |
| !! | TATTCATGAAATCTGAAACT+AGG | - | chr3_1:91823271-91823290 | Msa0387750:CDS | 25.0% |
| GAAGATATTGTCTTCTTCAT+CGG | + | chr3_1:91816548-91816567 | None:intergenic | 30.0% | |
| !!! | ACCTTCTTTTTTCGAATCAT+TGG | - | chr3_1:91816570-91816589 | Msa0387750:CDS | 30.0% |
| TCCAATGATTCGAAAAAAGA+AGG | + | chr3_1:91816574-91816593 | None:intergenic | 30.0% | |
| TTCATAATCCTGAACTTGAA+CGG | + | chr3_1:91816635-91816654 | None:intergenic | 30.0% | |
| AAGTTCAGGATTATGAATGT+CGG | - | chr3_1:91816638-91816657 | Msa0387750:intron | 30.0% | |
| ATATTAAGGCAATGGTATGT+TGG | - | chr3_1:91816884-91816903 | Msa0387750:intron | 30.0% | |
| AAAAATGACAGATACCAAAC+CGG | + | chr3_1:91816985-91817004 | None:intergenic | 30.0% | |
| CCAAACACTACAAATTCAAT+CGG | - | chr3_1:91817192-91817211 | Msa0387750:intron | 30.0% | |
| GCTCTGTTTGGTAAAAAATA+TGG | + | chr3_1:91817287-91817306 | None:intergenic | 30.0% | |
| !! | TTCGAGATTGATTGATTTTG+TGG | - | chr3_1:91817369-91817388 | Msa0387750:intron | 30.0% |
| !! | AGATTGATTGATTTTGTGGA+TGG | - | chr3_1:91817373-91817392 | Msa0387750:intron | 30.0% |
| !! | TCTGACTAAAATTGAGTTGA+AGG | - | chr3_1:91817499-91817518 | Msa0387750:intron | 30.0% |
| AGAATTGACTATGACATGTT+TGG | + | chr3_1:91817654-91817673 | None:intergenic | 30.0% | |
| ACATGACTGTATCAATTGAT+TGG | - | chr3_1:91817708-91817727 | Msa0387750:intron | 30.0% | |
| CATGACTGTATCAATTGATT+GGG | - | chr3_1:91817709-91817728 | Msa0387750:intron | 30.0% | |
| ATGACTGTATCAATTGATTG+GGG | - | chr3_1:91817710-91817729 | Msa0387750:intron | 30.0% | |
| ACTTGTATTAATTGATTGGG+GGG | - | chr3_1:91817820-91817839 | Msa0387750:CDS | 30.0% | |
| ATTCATGTATGTAGCATGAA+TGG | - | chr3_1:91817881-91817900 | Msa0387750:CDS | 30.0% | |
| TTCATGTATGTAGCATGAAT+GGG | - | chr3_1:91817882-91817901 | Msa0387750:CDS | 30.0% | |
| TGAATTCCATATTAGAGCTT+TGG | - | chr3_1:91817970-91817989 | Msa0387750:CDS | 30.0% | |
| CTTTAATTCATGTTGCTAGA+CGG | + | chr3_1:91818024-91818043 | None:intergenic | 30.0% | |
| ACATAGCGAATAACTCAAAA+TGG | + | chr3_1:91818174-91818193 | None:intergenic | 30.0% | |
| ! | ACTTTAGACCGTTCAATTTT+TGG | - | chr3_1:91818285-91818304 | Msa0387750:intron | 30.0% |
| ! | CTTTAGACCGTTCAATTTTT+GGG | - | chr3_1:91818286-91818305 | Msa0387750:intron | 30.0% |
| ! | TTTAGACCGTTCAATTTTTG+GGG | - | chr3_1:91818287-91818306 | Msa0387750:intron | 30.0% |
| TGATTGTGTGTGATTTGAAT+TGG | - | chr3_1:91818357-91818376 | Msa0387750:intron | 30.0% | |
| ACCATTAACCATAGAATTAG+TGG | - | chr3_1:91818789-91818808 | Msa0387750:intron | 30.0% | |
| TCCACTAATTCTATGGTTAA+TGG | + | chr3_1:91818793-91818812 | None:intergenic | 30.0% | |
| AACCATAGAATTAGTGGAAT+TGG | - | chr3_1:91818795-91818814 | Msa0387750:intron | 30.0% | |
| ! | TAGAATTGTTACTCTTTTGC+TGG | - | chr3_1:91818829-91818848 | Msa0387750:CDS | 30.0% |
| CTGTTATCATAGATTCAAGA+AGG | + | chr3_1:91818883-91818902 | None:intergenic | 30.0% | |
| TATGATAACAGATAGAAGCA+TGG | - | chr3_1:91818892-91818911 | Msa0387750:CDS | 30.0% | |
| CAATAGAATTCCAACTTCTA+TGG | - | chr3_1:91819166-91819185 | Msa0387750:intron | 30.0% | |
| ATAGTAGACTTGTAATCTTG+AGG | - | chr3_1:91819221-91819240 | Msa0387750:intron | 30.0% | |
| ! | ATTGATTCAATTCACGCAAT+TGG | + | chr3_1:91819295-91819314 | None:intergenic | 30.0% |
| TCCTATCATGTTCAATACTT+CGG | + | chr3_1:91819623-91819642 | None:intergenic | 30.0% | |
| TTGAACATGATAGGAATCAA+AGG | - | chr3_1:91819628-91819647 | Msa0387750:intron | 30.0% | |
| ACACCAACTTCATCATTATT+TGG | + | chr3_1:91819659-91819678 | None:intergenic | 30.0% | |
| ! | GATTGAGAGAACTATCTTTT+TGG | + | chr3_1:91819711-91819730 | None:intergenic | 30.0% |
| ACCATATTAGAAAACTAGCT+AGG | - | chr3_1:91819865-91819884 | Msa0387750:intron | 30.0% | |
| CCATATTAGAAAACTAGCTA+GGG | - | chr3_1:91819866-91819885 | Msa0387750:intron | 30.0% | |
| CATATTAGAAAACTAGCTAG+GGG | - | chr3_1:91819867-91819886 | Msa0387750:intron | 30.0% | |
| TTTAGACCTTACATGTTTAC+TGG | - | chr3_1:91819970-91819989 | Msa0387750:intron | 30.0% | |
| CTATAACCAGTAAACATGTA+AGG | + | chr3_1:91819979-91819998 | None:intergenic | 30.0% | |
| TGATAAAGTTCATTCATGCA+TGG | - | chr3_1:91820129-91820148 | Msa0387750:intron | 30.0% | |
| !!! | CTTCTAGATTTTCTAAAGCT+AGG | + | chr3_1:91820232-91820251 | None:intergenic | 30.0% |
| ATGTTTGTATTGCCATTCTT+TGG | - | chr3_1:91820265-91820284 | Msa0387750:intron | 30.0% | |
| TGTTTGTATTGCCATTCTTT+GGG | - | chr3_1:91820266-91820285 | Msa0387750:intron | 30.0% | |
| !! | CTTCTAGGTTTTATAAAGCT+AGG | + | chr3_1:91820417-91820436 | None:intergenic | 30.0% |
| ! | AGCAATCTAAAGCCTTAATA+CGG | + | chr3_1:91820444-91820463 | None:intergenic | 30.0% |
| !!! | AATTGAAGTTTTAGCTGAGT+TGG | - | chr3_1:91820507-91820526 | Msa0387750:intron | 30.0% |
| AATGCAAATGTCACCAATTT+CGG | + | chr3_1:91820704-91820723 | None:intergenic | 30.0% | |
| ! | TCTTTCGAAAAATCCCATTT+TGG | + | chr3_1:91820851-91820870 | None:intergenic | 30.0% |
| !! | CAAAATAACGGAAAGTACTT+TGG | + | chr3_1:91820919-91820938 | None:intergenic | 30.0% |
| ATATCTTATATTCCTCTCCA+GGG | - | chr3_1:91820994-91821013 | Msa0387750:intron | 30.0% | |
| !! | ATATGTGATTTTGACAACCA+TGG | + | chr3_1:91821222-91821241 | None:intergenic | 30.0% |
| ATAGATACAATTCCTCTAGT+AGG | - | chr3_1:91821377-91821396 | Msa0387750:intron | 30.0% | |
| AATGTGTGTATGATTCTGAT+AGG | - | chr3_1:91821726-91821745 | Msa0387750:intron | 30.0% | |
| ATGTGTGTATGATTCTGATA+GGG | - | chr3_1:91821727-91821746 | Msa0387750:intron | 30.0% | |
| TATCATTGGAGATATATACC+AGG | - | chr3_1:91821841-91821860 | Msa0387750:intron | 30.0% | |
| ATCATTGGAGATATATACCA+GGG | - | chr3_1:91821842-91821861 | Msa0387750:intron | 30.0% | |
| ! | TCAAAAAGTCACAAAGCTTT+TGG | + | chr3_1:91821899-91821918 | None:intergenic | 30.0% |
| TACATCATAACATCTTCAAC+TGG | - | chr3_1:91821930-91821949 | Msa0387750:intron | 30.0% | |
| TAACACAGACATCAATGTTT+AGG | + | chr3_1:91821978-91821997 | None:intergenic | 30.0% | |
| !!! | ATTATTTTAACAAGGCTTCC+AGG | - | chr3_1:91822081-91822100 | Msa0387750:intron | 30.0% |
| GTGGTAATTGAAAAACAAGT+AGG | - | chr3_1:91822258-91822277 | Msa0387750:intron | 30.0% | |
| ! | ATTATTCTTTGGAGGAAAAG+AGG | + | chr3_1:91822360-91822379 | None:intergenic | 30.0% |
| TGAGCCGTTAAATTATTCTT+TGG | + | chr3_1:91822371-91822390 | None:intergenic | 30.0% | |
| AATAAGACTTTCAGAACCAA+TGG | + | chr3_1:91822549-91822568 | None:intergenic | 30.0% | |
| AGTGTCTAATTAAGTGAACT+TGG | + | chr3_1:91822614-91822633 | None:intergenic | 30.0% | |
| AGTTCACTTAATTAGACACT+AGG | - | chr3_1:91822614-91822633 | Msa0387750:intron | 30.0% | |
| ! | TTTGGTGCGACATTAATTAA+AGG | - | chr3_1:91822652-91822671 | Msa0387750:intron | 30.0% |
| TTGGTGCGACATTAATTAAA+GGG | - | chr3_1:91822653-91822672 | Msa0387750:intron | 30.0% | |
| CCAAAAATCTTCAAATTACG+AGG | + | chr3_1:91822755-91822774 | None:intergenic | 30.0% | |
| ! | CCTCGTAATTTGAAGATTTT+TGG | - | chr3_1:91822752-91822771 | Msa0387750:intron | 30.0% |
| TACAAAATCAAAGATATGGC+AGG | - | chr3_1:91822801-91822820 | Msa0387750:intron | 30.0% | |
| ACAAAATCAAAGATATGGCA+GGG | - | chr3_1:91822802-91822821 | Msa0387750:intron | 30.0% | |
| CTGTTCATTTGAGCAAATTT+CGG | + | chr3_1:91822834-91822853 | None:intergenic | 30.0% | |
| ! | GAAATTTGCTCAAATGAACA+GGG | - | chr3_1:91822833-91822852 | Msa0387750:intron | 30.0% |
| ! | AAATTTGCTCAAATGAACAG+GGG | - | chr3_1:91822834-91822853 | Msa0387750:intron | 30.0% |
| CCTGTAATTTGAGCAAATTT+AGG | + | chr3_1:91822898-91822917 | None:intergenic | 30.0% | |
| ! | CCTAAATTTGCTCAAATTAC+AGG | - | chr3_1:91822895-91822914 | Msa0387750:intron | 30.0% |
| ! | AAATTTGCTCAAATTACAGG+GGG | - | chr3_1:91822898-91822917 | Msa0387750:intron | 30.0% |
| AATTTGAAGGTTGTACATTC+AGG | - | chr3_1:91823146-91823165 | Msa0387750:CDS | 30.0% | |
| ! | GTATATAATTTTGTGGGCAT+GGG | - | chr3_1:91823360-91823379 | Msa0387750:exon | 30.0% |
| AAATGGGAAATAATCTGGTA+CGG | + | chr3_1:91823418-91823437 | None:intergenic | 30.0% | |
| GAATTTCGAAACTACGAAGA+CGG | - | chr3_1:91816454-91816473 | Msa0387750:CDS | 35.0% | |
| AAAAGGAAACACTTCGAGTA+AGG | - | chr3_1:91816509-91816528 | Msa0387750:CDS | 35.0% | |
| !! | GAAGCTTGTTAAGGATGTTA+GGG | - | chr3_1:91816660-91816679 | Msa0387750:intron | 35.0% |
| CCGATTGAATTTGTAGTGTT+TGG | + | chr3_1:91817195-91817214 | None:intergenic | 35.0% | |
| ATTTCATGTACGTGCATGTT+TGG | - | chr3_1:91817425-91817444 | Msa0387750:CDS | 35.0% | |
| !! | AAGCTACAATTTCTAGCTTC+AGG | - | chr3_1:91817603-91817622 | Msa0387750:intron | 35.0% |
| !! | TTCTAGAATCAATTTCGGCT+TGG | - | chr3_1:91817670-91817689 | Msa0387750:intron | 35.0% |
| TGACTGTATCAATTGATTGG+GGG | - | chr3_1:91817711-91817730 | Msa0387750:intron | 35.0% | |
| AATTGATTGGGGGATTTGAA+GGG | - | chr3_1:91817721-91817740 | Msa0387750:intron | 35.0% | |
| ! | AATTTAAGGTCATCCATGCA+TGG | - | chr3_1:91817759-91817778 | Msa0387750:CDS | 35.0% |
| !! | ATTACAAAAGCATCCATGCA+TGG | + | chr3_1:91817775-91817794 | None:intergenic | 35.0% |
| TCACTTCCCCAAAAATTGAA+CGG | + | chr3_1:91818296-91818315 | None:intergenic | 35.0% | |
| !! | TCTCTCTCTGTTTTTCTACT+TGG | + | chr3_1:91818674-91818693 | None:intergenic | 35.0% |
| ! | CATAATCCTTCGAGTTACTT+TGG | + | chr3_1:91818712-91818731 | None:intergenic | 35.0% |
| GTCCAATTCCACTAATTCTA+TGG | + | chr3_1:91818800-91818819 | None:intergenic | 35.0% | |
| ! | TGATTGTTGCTCTAAGTTAG+AGG | - | chr3_1:91819037-91819056 | Msa0387750:CDS | 35.0% |
| ! | GAAGCAGTGAAATTGATAGT+AGG | - | chr3_1:91819098-91819117 | Msa0387750:intron | 35.0% |
| AATTCCAACTTCTATGGGAA+TGG | - | chr3_1:91819172-91819191 | Msa0387750:intron | 35.0% | |
| TCATTAATTAGTGGCAGGAT+TGG | + | chr3_1:91819200-91819219 | None:intergenic | 35.0% | |
| CTATCTCATTAATTAGTGGC+AGG | + | chr3_1:91819205-91819224 | None:intergenic | 35.0% | |
| !! | ACCGAAGTATTGAACATGAT+AGG | - | chr3_1:91819619-91819638 | Msa0387750:intron | 35.0% |
| GATTGCAGAGAATGAATTTG+TGG | - | chr3_1:91819743-91819762 | Msa0387750:intron | 35.0% | |
| !!! | CCCTAGCTAGTTTTCTAATA+TGG | + | chr3_1:91819869-91819888 | None:intergenic | 35.0% |
| TGAGATTACAATAGGTGCAA+TGG | - | chr3_1:91819941-91819960 | Msa0387750:intron | 35.0% | |
| TCACTGAAACGTAGTTACTA+GGG | - | chr3_1:91820016-91820035 | Msa0387750:intron | 35.0% | |
| GCATGAATGAACTTTATCAG+AGG | + | chr3_1:91820128-91820147 | None:intergenic | 35.0% | |
| CTTTGTTCTTGGAGATTACA+AGG | - | chr3_1:91820758-91820777 | Msa0387750:intron | 35.0% | |
| AGAATGCAAAAGGTAAGTAG+TGG | - | chr3_1:91820868-91820887 | Msa0387750:intron | 35.0% | |
| GAATGCAAAAGGTAAGTAGT+GGG | - | chr3_1:91820869-91820888 | Msa0387750:intron | 35.0% | |
| GATATCTTATATTCCTCTCC+AGG | - | chr3_1:91820993-91821012 | Msa0387750:intron | 35.0% | |
| ! | TAGGTTGAACTTGCGAATAT+GGG | - | chr3_1:91821437-91821456 | Msa0387750:intron | 35.0% |
| AAGCATGGAAGATAAAGAGT+TGG | - | chr3_1:91821692-91821711 | Msa0387750:intron | 35.0% | |
| TCATTGGAGATATATACCAG+GGG | - | chr3_1:91821843-91821862 | Msa0387750:intron | 35.0% | |
| TTGTTCAGTGTGCAACATAA+TGG | + | chr3_1:91821871-91821890 | None:intergenic | 35.0% | |
| !! | ACTATTGATTCATCCGTGAA+AGG | - | chr3_1:91822031-91822050 | Msa0387750:intron | 35.0% |
| !! | ATAACTTAGGTTGACGAATC+AGG | + | chr3_1:91822063-91822082 | None:intergenic | 35.0% |
| AAATTACTGCCAAAACAACC+TGG | + | chr3_1:91822102-91822121 | None:intergenic | 35.0% | |
| TATTATGGATCTGCAAGTCT+AGG | - | chr3_1:91822155-91822174 | Msa0387750:intron | 35.0% | |
| !! | TGTTTTTCAATTACCACCCA+TGG | + | chr3_1:91822255-91822274 | None:intergenic | 35.0% |
| AACACTGTTTCCTAAATCTG+AGG | - | chr3_1:91822308-91822327 | Msa0387750:intron | 35.0% | |
| GCCGTTAAATTATTCTTTGG+AGG | + | chr3_1:91822368-91822387 | None:intergenic | 35.0% | |
| GTCTAATTAAGTGAACTTGG+TGG | + | chr3_1:91822611-91822630 | None:intergenic | 35.0% | |
| ACTTAATTAGACACTAGGCA+CGG | - | chr3_1:91822619-91822638 | Msa0387750:intron | 35.0% | |
| ! | TATTTTACAGGGGGTAAAAC+CGG | + | chr3_1:91822715-91822734 | None:intergenic | 35.0% |
| TGTACTGTCAAAACTCATGA+AGG | + | chr3_1:91822785-91822804 | None:intergenic | 35.0% | |
| CAAAATCAAAGATATGGCAG+GGG | - | chr3_1:91822803-91822822 | Msa0387750:intron | 35.0% | |
| AAAATCAAAGATATGGCAGG+GGG | - | chr3_1:91822804-91822823 | Msa0387750:intron | 35.0% | |
| ! | CGAAATTTGCTCAAATGAAC+AGG | - | chr3_1:91822832-91822851 | Msa0387750:intron | 35.0% |
| ! | AATTTGCTCAAATGAACAGG+GGG | - | chr3_1:91822835-91822854 | Msa0387750:intron | 35.0% |
| CCTGTAATATAGGTCATTTC+CGG | + | chr3_1:91823009-91823028 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | - | chr3_1:91823007-91823026 | Msa0387750:CDS | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | - | chr3_1:91823008-91823027 | Msa0387750:CDS | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | - | chr3_1:91823009-91823028 | Msa0387750:CDS | 35.0% | |
| AAATGACCTATATTACAGGG+GGG | - | chr3_1:91823010-91823029 | Msa0387750:CDS | 35.0% | |
| TAGAAGGAGTAGCAATTTGA+AGG | - | chr3_1:91823133-91823152 | Msa0387750:CDS | 35.0% | |
| AAACAAATCCCTCTTAGCAT+TGG | + | chr3_1:91823192-91823211 | None:intergenic | 35.0% | |
| !! | TGCTAAGAGGGATTTGTTTT+CGG | - | chr3_1:91823193-91823212 | Msa0387750:CDS | 35.0% |
| ! | TTGTCCTCTATACTCGTTTT+TGG | - | chr3_1:91823329-91823348 | Msa0387750:CDS | 35.0% |
| ACAACCAAAAACGAGTATAG+AGG | + | chr3_1:91823336-91823355 | None:intergenic | 35.0% | |
| !!! | TCTATACTCGTTTTTGGTTG+TGG | - | chr3_1:91823335-91823354 | Msa0387750:CDS | 35.0% |
| !!! | CTATACTCGTTTTTGGTTGT+GGG | - | chr3_1:91823336-91823355 | Msa0387750:CDS | 35.0% |
| ! | TGTGGGCGTATATAATTTTG+TGG | - | chr3_1:91823353-91823372 | Msa0387750:CDS | 35.0% |
| ! | GTGGGCGTATATAATTTTGT+GGG | - | chr3_1:91823354-91823373 | Msa0387750:CDS | 35.0% |
| ! | CGTATATAATTTTGTGGGCA+TGG | - | chr3_1:91823359-91823378 | Msa0387750:exon | 35.0% |
| ! | TACACTACACCGAGTTGAAA+TGG | - | chr3_1:91816309-91816328 | Msa0387750:three_prime_UTR | 40.0% |
| ! | GTTTCTCTGCCATTTCAACT+CGG | + | chr3_1:91816321-91816340 | None:intergenic | 40.0% |
| !!! | ACGGTGTCGTTTTGTTTCAA+CGG | + | chr3_1:91816355-91816374 | None:intergenic | 40.0% |
| CGGAGTTTCGAAGAATGAAA+CGG | + | chr3_1:91816374-91816393 | None:intergenic | 40.0% | |
| TTCCTCCAACGTAACCATAA+CGG | + | chr3_1:91816491-91816510 | None:intergenic | 40.0% | |
| TATGGTTACGTTGGAGGAAA+AGG | - | chr3_1:91816492-91816511 | Msa0387750:CDS | 40.0% | |
| !! | TGAATGTCGGAAGCTTGTTA+AGG | - | chr3_1:91816651-91816670 | Msa0387750:intron | 40.0% |
| !! | GGAAGCTTGTTAAGGATGTT+AGG | - | chr3_1:91816659-91816678 | Msa0387750:intron | 40.0% |
| TCATAGAAGCGAAGATCATC+AGG | + | chr3_1:91816709-91816728 | None:intergenic | 40.0% | |
| AGATTGCACGGATAAAACTG+AGG | + | chr3_1:91817091-91817110 | None:intergenic | 40.0% | |
| ATCTGCTATCAGCTATAAGC+TGG | - | chr3_1:91817222-91817241 | Msa0387750:intron | 40.0% | |
| TTACCAAACAGAGCCATAGT+TGG | - | chr3_1:91817293-91817312 | Msa0387750:intron | 40.0% | |
| ! | AATCCAACTATGGCTCTGTT+TGG | + | chr3_1:91817299-91817318 | None:intergenic | 40.0% |
| ! | ACAGAGCCATAGTTGGATTT+TGG | - | chr3_1:91817300-91817319 | Msa0387750:intron | 40.0% |
| ! | CAGAGCCATAGTTGGATTTT+GGG | - | chr3_1:91817301-91817320 | Msa0387750:intron | 40.0% |
| ! | AGAGCCATAGTTGGATTTTG+GGG | - | chr3_1:91817302-91817321 | Msa0387750:intron | 40.0% |
| TACGTGCATGTTTGGTTATG+TGG | - | chr3_1:91817433-91817452 | Msa0387750:CDS | 40.0% | |
| TGCATGTTTGGTTATGTGGT+GGG | - | chr3_1:91817437-91817456 | Msa0387750:intron | 40.0% | |
| CAATTGATTGGGGGATTTGA+AGG | - | chr3_1:91817720-91817739 | Msa0387750:intron | 40.0% | |
| AATTGATTGGGGGGATTTGA+AGG | - | chr3_1:91817829-91817848 | Msa0387750:CDS | 40.0% | |
| ATTGATTGGGGGGATTTGAA+GGG | - | chr3_1:91817830-91817849 | Msa0387750:CDS | 40.0% | |
| TGTATGTAGCATGAATGGGT+AGG | - | chr3_1:91817886-91817905 | Msa0387750:CDS | 40.0% | |
| ! | GGCAATCCAAAGCTCTAATA+TGG | + | chr3_1:91817979-91817998 | None:intergenic | 40.0% |
| ! | TTCTGCATTTCTTGCTGTCT+AGG | + | chr3_1:91818562-91818581 | None:intergenic | 40.0% |
| TTCTTCGACTATCAGCACTA+GGG | - | chr3_1:91818631-91818650 | Msa0387750:intron | 40.0% | |
| TCTACTTGGCATAACAGACT+AGG | + | chr3_1:91818660-91818679 | None:intergenic | 40.0% | |
| AACAGAGAGAGAATAAGCAG+TGG | - | chr3_1:91818682-91818701 | Msa0387750:intron | 40.0% | |
| GATTATGAGACCATGGTACA+GGG | - | chr3_1:91818725-91818744 | Msa0387750:intron | 40.0% | |
| AGAATTAGTGGAATTGGACC+AGG | - | chr3_1:91818801-91818820 | Msa0387750:intron | 40.0% | |
| GTCAAGTGTGCCATAAGTTT+GGG | + | chr3_1:91818920-91818939 | None:intergenic | 40.0% | |
| TGTCAAGTGTGCCATAAGTT+TGG | + | chr3_1:91818921-91818940 | None:intergenic | 40.0% | |
| ! | TTACGCTTTTCTAATGGCTC+AGG | + | chr3_1:91819014-91819033 | None:intergenic | 40.0% |
| ! | CCTTGAGCGTTTTTGCAAAA+TGG | + | chr3_1:91819129-91819148 | None:intergenic | 40.0% |
| ! | CCATTTTGCAAAAACGCTCA+AGG | - | chr3_1:91819126-91819145 | Msa0387750:intron | 40.0% |
| TGCGTGAATTGAATCAATCG+TGG | - | chr3_1:91819297-91819316 | Msa0387750:intron | 40.0% | |
| TGAGCTTCGCAATACGAAAA+TGG | + | chr3_1:91819362-91819381 | None:intergenic | 40.0% | |
| ! | GCTTTGCATTGATGTGTGTT+TGG | - | chr3_1:91819398-91819417 | Msa0387750:intron | 40.0% |
| CAAGAATTCTTGGCAACTAG+GGG | + | chr3_1:91819443-91819462 | None:intergenic | 40.0% | |
| CCAAGAATTCTTGGCAACTA+GGG | + | chr3_1:91819444-91819463 | None:intergenic | 40.0% | |
| TCCAAGAATTCTTGGCAACT+AGG | + | chr3_1:91819445-91819464 | None:intergenic | 40.0% | |
| ! | TGATCGGTTCCAAGAATTCT+TGG | + | chr3_1:91819453-91819472 | None:intergenic | 40.0% |
| ! | TTGTGGATTGTAACCAAGCT+AGG | - | chr3_1:91819497-91819516 | Msa0387750:intron | 40.0% |
| ! | TTGTGGATTGTAACCAAGCT+AGG | - | chr3_1:91819497-91819516 | Msa0387750:intron | 40.0% |
| AAGTTTAGTTGCTCCTAGCT+TGG | + | chr3_1:91819549-91819568 | None:intergenic | 40.0% | |
| ACAGGTAGAACCTGTGATTA+AGG | + | chr3_1:91819683-91819702 | None:intergenic | 40.0% | |
| TAATCACAGGTTCTACCTGT+CGG | - | chr3_1:91819683-91819702 | Msa0387750:intron | 40.0% | |
| GAATGAATTTGTGGCCAAGA+CGG | - | chr3_1:91819752-91819771 | Msa0387750:intron | 40.0% | |
| ATTAGAAAACTAGCTAGGGG+TGG | - | chr3_1:91819870-91819889 | Msa0387750:intron | 40.0% | |
| ! | TACTGGTTATAGCCAGTAAC+AGG | - | chr3_1:91819987-91820006 | Msa0387750:intron | 40.0% |
| ACTGGTTATAGCCAGTAACA+GGG | - | chr3_1:91819988-91820007 | Msa0387750:intron | 40.0% | |
| CTCACTGAAACGTAGTTACT+AGG | - | chr3_1:91820015-91820034 | Msa0387750:intron | 40.0% | |
| ACGTAGTTACTAGGGAGTTA+AGG | - | chr3_1:91820024-91820043 | Msa0387750:intron | 40.0% | |
| !! | ATTGCCATTCTTTGGGTTGA+AGG | - | chr3_1:91820273-91820292 | Msa0387750:intron | 40.0% |
| !! | TTGCCATTCTTTGGGTTGAA+GGG | - | chr3_1:91820274-91820293 | Msa0387750:intron | 40.0% |
| TAACCCTTCAACCCAAAGAA+TGG | + | chr3_1:91820280-91820299 | None:intergenic | 40.0% | |
| CCTTAATACGGAATGCTTCT+AGG | + | chr3_1:91820432-91820451 | None:intergenic | 40.0% | |
| !! | CCTAGAAGCATTCCGTATTA+AGG | - | chr3_1:91820429-91820448 | Msa0387750:intron | 40.0% |
| ATGTAACCAGGACAGGATAA+AGG | + | chr3_1:91820653-91820672 | None:intergenic | 40.0% | |
| TTTATCCTGTCCTGGTTACA+TGG | - | chr3_1:91820652-91820671 | Msa0387750:intron | 40.0% | |
| TTATCCTGTCCTGGTTACAT+GGG | - | chr3_1:91820653-91820672 | Msa0387750:intron | 40.0% | |
| GCAGTCAACTTTCCTTCATT+TGG | + | chr3_1:91820679-91820698 | None:intergenic | 40.0% | |
| TGTTCTTGGAGATTACAAGG+AGG | - | chr3_1:91820761-91820780 | Msa0387750:intron | 40.0% | |
| AGGAGACTAGAATCACAATC+TGG | - | chr3_1:91820781-91820800 | Msa0387750:intron | 40.0% | |
| ACTAGAATCACAATCTGGAC+AGG | - | chr3_1:91820786-91820805 | Msa0387750:intron | 40.0% | |
| ATCACAATCTGGACAGGAAT+TGG | - | chr3_1:91820792-91820811 | Msa0387750:intron | 40.0% | |
| AAACAAACCTTCAGGAGAAC+AGG | + | chr3_1:91821052-91821071 | None:intergenic | 40.0% | |
| ! | ATTTTCCTCGTGACTCTGTT+AGG | - | chr3_1:91821186-91821205 | Msa0387750:intron | 40.0% |
| TTTGACAACCATGGTTACCA+AGG | + | chr3_1:91821213-91821232 | None:intergenic | 40.0% | |
| AGAATCTGACATGATCCTAC+AGG | + | chr3_1:91821286-91821305 | None:intergenic | 40.0% | |
| AGGATCATGTCAGATTCTAC+TGG | - | chr3_1:91821288-91821307 | Msa0387750:intron | 40.0% | |
| GATACAATTCCTCTAGTAGG+TGG | - | chr3_1:91821380-91821399 | Msa0387750:intron | 40.0% | |
| TAGTAAGATCCACCTACTAG+AGG | + | chr3_1:91821392-91821411 | None:intergenic | 40.0% | |
| TGGATCTTACTATCCTTGAG+AGG | - | chr3_1:91821400-91821419 | Msa0387750:intron | 40.0% | |
| CATATTCGCAAGTTCAACCT+AGG | + | chr3_1:91821438-91821457 | None:intergenic | 40.0% | |
| ! | CTAGGTTGAACTTGCGAATA+TGG | - | chr3_1:91821436-91821455 | Msa0387750:intron | 40.0% |
| TATCTTCCATGCTTTCGTCA+GGG | + | chr3_1:91821686-91821705 | None:intergenic | 40.0% | |
| TTATCTTCCATGCTTTCGTC+AGG | + | chr3_1:91821687-91821706 | None:intergenic | 40.0% | |
| AAGAACTCTACAGCTGTTGA+TGG | + | chr3_1:91821774-91821793 | None:intergenic | 40.0% | |
| TCATAACATCTTCAACTGGC+AGG | - | chr3_1:91821934-91821953 | Msa0387750:intron | 40.0% | |
| AATCAGGCATTCACCTTTCA+CGG | + | chr3_1:91822047-91822066 | None:intergenic | 40.0% | |
| CCTGAAAAAAGACAGTGAAG+AGG | + | chr3_1:91822232-91822251 | None:intergenic | 40.0% | |
| !!! | CCTCTTCACTGTCTTTTTTC+AGG | - | chr3_1:91822229-91822248 | Msa0387750:intron | 40.0% |
| !!! | ACTGTCTTTTTTCAGGCCAT+GGG | - | chr3_1:91822236-91822255 | Msa0387750:intron | 40.0% |
| ! | CTGTTTCCTAAATCTGAGGT+AGG | - | chr3_1:91822312-91822331 | Msa0387750:intron | 40.0% |
| ! | ATTCTTTGGAGGAAAAGAGG+AGG | + | chr3_1:91822357-91822376 | None:intergenic | 40.0% |
| TGGCTATTGGTCAAGACTAT+AGG | - | chr3_1:91822402-91822421 | Msa0387750:intron | 40.0% | |
| !!! | GTTTCTTTTGGTGCCTTAGA+CGG | + | chr3_1:91822444-91822463 | None:intergenic | 40.0% |
| !! | CCAATGGACTACATGTTTGA+CGG | + | chr3_1:91822533-91822552 | None:intergenic | 40.0% |
| GTGTTTACCCCCTGTAATAT+AGG | - | chr3_1:91822683-91822702 | Msa0387750:intron | 40.0% | |
| GAAATGGCCTATATTACAGG+GGG | + | chr3_1:91822693-91822712 | None:intergenic | 40.0% | |
| GGAAATGGCCTATATTACAG+GGG | + | chr3_1:91822694-91822713 | None:intergenic | 40.0% | |
| CGGAAATGGCCTATATTACA+GGG | + | chr3_1:91822695-91822714 | None:intergenic | 40.0% | |
| CCTGTAATATAGGCCATTTC+CGG | - | chr3_1:91822693-91822712 | Msa0387750:intron | 40.0% | |
| ATTTGCTCAAATGAACAGGG+GGG | - | chr3_1:91822836-91822855 | Msa0387750:intron | 40.0% | |
| GGGGGTGAAATATTCAATGA+AGG | - | chr3_1:91822916-91822935 | Msa0387750:intron | 40.0% | |
| ! | TATTTTACAGGGGGGAAAAC+CGG | - | chr3_1:91822987-91823006 | Msa0387750:CDS | 40.0% |
| CCGGAAATGACCTATATTAC+AGG | - | chr3_1:91823006-91823025 | Msa0387750:CDS | 40.0% | |
| TGTTTACCCCCCTGTAATAT+AGG | + | chr3_1:91823019-91823038 | None:intergenic | 40.0% | |
| TGTCTTTCAGAATGCATCAC+AGG | - | chr3_1:91823100-91823119 | Msa0387750:CDS | 40.0% | |
| TTTCAGAATGCATCACAGGA+TGG | - | chr3_1:91823104-91823123 | Msa0387750:CDS | 40.0% | |
| CACAGGATGGAAACAATAGA+AGG | - | chr3_1:91823117-91823136 | Msa0387750:CDS | 40.0% | |
| TCAAGATTGCCAATGCTAAG+AGG | - | chr3_1:91823180-91823199 | Msa0387750:CDS | 40.0% | |
| CAAGATTGCCAATGCTAAGA+GGG | - | chr3_1:91823181-91823200 | Msa0387750:CDS | 40.0% | |
| !! | AATTTGCTGATCACCAAGTG+CGG | - | chr3_1:91823216-91823235 | Msa0387750:CDS | 40.0% |
| ! | TATAATTTTGTGGGCATGGG+CGG | - | chr3_1:91823363-91823382 | Msa0387750:exon | 40.0% |
| !! | CAACTCGGTGTAGTGTAGAA+GGG | + | chr3_1:91816306-91816325 | None:intergenic | 45.0% |
| !! | TCAACTCGGTGTAGTGTAGA+AGG | + | chr3_1:91816307-91816326 | None:intergenic | 45.0% |
| GTACACCGTTATGGTTACGT+TGG | - | chr3_1:91816483-91816502 | Msa0387750:CDS | 45.0% | |
| ! | ACCTGTTTCCGTTCAAGTTC+AGG | - | chr3_1:91816624-91816643 | Msa0387750:intron | 45.0% |
| TCCTGAACTTGAACGGAAAC+AGG | + | chr3_1:91816628-91816647 | None:intergenic | 45.0% | |
| CTATGATGCTGTTGTTGACG+CGG | - | chr3_1:91816723-91816742 | Msa0387750:intron | 45.0% | |
| ! | GAGCCATAGTTGGATTTTGG+GGG | - | chr3_1:91817303-91817322 | Msa0387750:intron | 45.0% |
| CTTCCCCCAAAATCCAACTA+TGG | + | chr3_1:91817309-91817328 | None:intergenic | 45.0% | |
| GTGCATGTTTGGTTATGTGG+TGG | - | chr3_1:91817436-91817455 | Msa0387750:intron | 45.0% | |
| TCAGGTTATTGCGCAGAGAA+CGG | + | chr3_1:91818000-91818019 | None:intergenic | 45.0% | |
| TTCATGTTGCTAGACGGTTC+AGG | + | chr3_1:91818018-91818037 | None:intergenic | 45.0% | |
| TGATGAACTGCATCAACGAG+AGG | + | chr3_1:91818118-91818137 | None:intergenic | 45.0% | |
| CTTCTTCGACTATCAGCACT+AGG | - | chr3_1:91818630-91818649 | Msa0387750:intron | 45.0% | |
| AGAGAGAGAATAAGCAGTGG+AGG | - | chr3_1:91818685-91818704 | Msa0387750:intron | 45.0% | |
| CTCGAAGGATTATGAGACCA+TGG | - | chr3_1:91818718-91818737 | Msa0387750:intron | 45.0% | |
| GGATTATGAGACCATGGTAC+AGG | - | chr3_1:91818724-91818743 | Msa0387750:intron | 45.0% | |
| ! | CTCTTTTGCTGGTGATCAAG+AGG | - | chr3_1:91818840-91818859 | Msa0387750:CDS | 45.0% |
| ! | TGGTGATCAAGAGGTACAGA+GGG | - | chr3_1:91818849-91818868 | Msa0387750:CDS | 45.0% |
| AAGCATGGTGCCCAAACTTA+TGG | - | chr3_1:91818907-91818926 | Msa0387750:CDS | 45.0% | |
| ACTTATGGCACACTTGACAC+TGG | - | chr3_1:91818922-91818941 | Msa0387750:CDS | 45.0% | |
| TCAACTGCAAATGAGGCAGA+GGG | + | chr3_1:91819077-91819096 | None:intergenic | 45.0% | |
| TGCTTCCTCAACTGCAAATG+AGG | + | chr3_1:91819084-91819103 | None:intergenic | 45.0% | |
| GGTTCCATTCCCATAGAAGT+TGG | + | chr3_1:91819179-91819198 | None:intergenic | 45.0% | |
| GCATCTGGATGTCACTCTTA+GGG | + | chr3_1:91819251-91819270 | None:intergenic | 45.0% | |
| TATTTCTCCATGTGCGCATC+TGG | + | chr3_1:91819266-91819285 | None:intergenic | 45.0% | |
| CCCTAGTTGCCAAGAATTCT+TGG | - | chr3_1:91819441-91819460 | Msa0387750:intron | 45.0% | |
| GACATGTTGTAACGCGTGAT+CGG | + | chr3_1:91819469-91819488 | None:intergenic | 45.0% | |
| ! | AGTTGGTGTGCCTTAATCAC+AGG | - | chr3_1:91819670-91819689 | Msa0387750:intron | 45.0% |
| !!! | ACTATCTTTTTGGTGCCGAC+AGG | + | chr3_1:91819701-91819720 | None:intergenic | 45.0% |
| TGCCATTGATGTTTCCGTCT+TGG | + | chr3_1:91819769-91819788 | None:intergenic | 45.0% | |
| CTGGTTATAGCCAGTAACAG+GGG | - | chr3_1:91819989-91820008 | Msa0387750:intron | 45.0% | |
| CTATTGTAGCAGCAGCATCT+AGG | - | chr3_1:91820478-91820497 | Msa0387750:intron | 45.0% | |
| GCATTCTCGCAAAAAAGACG+CGG | - | chr3_1:91820609-91820628 | Msa0387750:intron | 45.0% | |
| TGTGTACCTTTATCCTGTCC+TGG | - | chr3_1:91820644-91820663 | Msa0387750:intron | 45.0% | |
| TTCATTTGGCCCATGTAACC+AGG | + | chr3_1:91820665-91820684 | None:intergenic | 45.0% | |
| TGGTTACATGGGCCAAATGA+AGG | - | chr3_1:91820664-91820683 | Msa0387750:intron | 45.0% | |
| AAGTTGACTGCTGCCGAAAT+TGG | - | chr3_1:91820688-91820707 | Msa0387750:intron | 45.0% | |
| ! | GCTGGATCGTGCTCTTTTAT+AGG | + | chr3_1:91820733-91820752 | None:intergenic | 45.0% |
| TTGGTTGTGATCTGCCACAA+AGG | - | chr3_1:91820811-91820830 | Msa0387750:intron | 45.0% | |
| ! | TGTTAGGACCTTGGTAACCA+TGG | - | chr3_1:91821202-91821221 | Msa0387750:intron | 45.0% |
| CATGTCAGATTCTACTGGAC+TGG | - | chr3_1:91821293-91821312 | Msa0387750:intron | 45.0% | |
| TTCAACCTAGGAACCAAGCT+TGG | + | chr3_1:91821426-91821445 | None:intergenic | 45.0% | |
| AGCATGCTGGAAAGCAAAGT+AGG | + | chr3_1:91821520-91821539 | None:intergenic | 45.0% | |
| TAAATGGGTGTAGAGCATGC+TGG | + | chr3_1:91821533-91821552 | None:intergenic | 45.0% | |
| ! | ACAAGGCTTCCAGGTTGTTT+TGG | - | chr3_1:91822090-91822109 | Msa0387750:intron | 45.0% |
| !!! | CACTGTCTTTTTTCAGGCCA+TGG | - | chr3_1:91822235-91822254 | Msa0387750:intron | 45.0% |
| TGAAGGCCTACCTCAGATTT+AGG | + | chr3_1:91822321-91822340 | None:intergenic | 45.0% | |
| CAGTAGTAGAGCATGGCTAT+TGG | - | chr3_1:91822389-91822408 | Msa0387750:intron | 45.0% | |
| GTCACATCATCAACCGTCTA+AGG | - | chr3_1:91822428-91822447 | Msa0387750:intron | 45.0% | |
| ! | GACGGCATGCATTTTCATCA+GGG | + | chr3_1:91822515-91822534 | None:intergenic | 45.0% |
| ! | TGACGGCATGCATTTTCATC+AGG | + | chr3_1:91822516-91822535 | None:intergenic | 45.0% |
| CCGTCAAACATGTAGTCCAT+TGG | - | chr3_1:91822530-91822549 | Msa0387750:intron | 45.0% | |
| ! | AGGCACGGCAGATTTTCATT+TGG | - | chr3_1:91822634-91822653 | Msa0387750:intron | 45.0% |
| CCGGAAATGGCCTATATTAC+AGG | + | chr3_1:91822696-91822715 | None:intergenic | 45.0% | |
| GCACAAGAAGCTTGCATTTC+TGG | - | chr3_1:91823241-91823260 | Msa0387750:CDS | 45.0% | |
| ATCCAGTGTGAAACATGGTG+TGG | - | chr3_1:91823386-91823405 | Msa0387750:five_prime_UTR | 45.0% | |
| ATTCTTCGAAACTCCGACGC+CGG | - | chr3_1:91816378-91816397 | Msa0387750:three_prime_UTR | 50.0% | |
| GAAACTACGAAGACGGTGCA+TGG | - | chr3_1:91816461-91816480 | Msa0387750:CDS | 50.0% | |
| CACCGTTATGGTTACGTTGG+AGG | - | chr3_1:91816486-91816505 | Msa0387750:CDS | 50.0% | |
| GGAGGTCCAAAGTAACTCGA+AGG | - | chr3_1:91818703-91818722 | Msa0387750:intron | 50.0% | |
| CTAACTCTTGCCCTGTACCA+TGG | + | chr3_1:91818738-91818757 | None:intergenic | 50.0% | |
| AGAGTTAGACTGCCATGGCA+TGG | - | chr3_1:91818750-91818769 | Msa0387750:intron | 50.0% | |
| GAGTTAGACTGCCATGGCAT+GGG | - | chr3_1:91818751-91818770 | Msa0387750:intron | 50.0% | |
| ! | CTGGTGATCAAGAGGTACAG+AGG | - | chr3_1:91818848-91818867 | Msa0387750:CDS | 50.0% |
| ATGGCACACTTGACACTGGA+TGG | - | chr3_1:91818926-91818945 | Msa0387750:CDS | 50.0% | |
| CTCAACTGCAAATGAGGCAG+AGG | + | chr3_1:91819078-91819097 | None:intergenic | 50.0% | |
| CTCTGCCTCATTTGCAGTTG+AGG | - | chr3_1:91819076-91819095 | Msa0387750:CDS | 50.0% | |
| CGCATCTGGATGTCACTCTT+AGG | + | chr3_1:91819252-91819271 | None:intergenic | 50.0% | |
| TGCGAAGCTCAGAACAAAGC+TGG | - | chr3_1:91819371-91819390 | Msa0387750:intron | 50.0% | |
| CAACATGTCGCGCGTAATTG+TGG | - | chr3_1:91819480-91819499 | Msa0387750:intron | 50.0% | |
| GGCCAAGACGGAAACATCAA+TGG | - | chr3_1:91819764-91819783 | Msa0387750:intron | 50.0% | |
| ! | ATGCACTGGCAAGGTTTGTG+TGG | - | chr3_1:91819808-91819827 | Msa0387750:intron | 50.0% |
| ! | TGCACTGGCAAGGTTTGTGT+GGG | - | chr3_1:91819809-91819828 | Msa0387750:intron | 50.0% |
| CAGTAAAGAAGCCGATCCTG+TGG | + | chr3_1:91819837-91819856 | None:intergenic | 50.0% | |
| CAGTGAGAATCCCCTGTTAC+TGG | + | chr3_1:91820002-91820021 | None:intergenic | 50.0% | |
| ! | CACTAGCTCTTGTGAGCTCT+AGG | - | chr3_1:91820093-91820112 | Msa0387750:intron | 50.0% |
| !! | TAGCTCTTGTGAGCTCTAGG+CGG | - | chr3_1:91820096-91820115 | Msa0387750:intron | 50.0% |
| ! | TAGCAGCAGCATCTAGGATC+AGG | - | chr3_1:91820484-91820503 | Msa0387750:intron | 50.0% |
| ! | AAAAGAGCACGATCCAGCTG+TGG | - | chr3_1:91820735-91820754 | Msa0387750:intron | 50.0% |
| !! | TCCAGCTGTGGCTTTGTTCT+TGG | - | chr3_1:91820747-91820766 | Msa0387750:intron | 50.0% |
| TCCAAGAACAAAGCCACAGC+TGG | + | chr3_1:91820751-91820770 | None:intergenic | 50.0% | |
| AAGGTCCTAACAGAGTCACG+AGG | + | chr3_1:91821194-91821213 | None:intergenic | 50.0% | |
| TCGTGACTCTGTTAGGACCT+TGG | - | chr3_1:91821193-91821212 | Msa0387750:intron | 50.0% | |
| TATCCTTGAGAGGCCAAGCT+TGG | - | chr3_1:91821410-91821429 | Msa0387750:intron | 50.0% | |
| !!! | GTCTTTTTTCAGGCCATGGG+TGG | - | chr3_1:91822239-91822258 | Msa0387750:intron | 50.0% |
| AACGGCTCAGTAGTAGAGCA+TGG | - | chr3_1:91822382-91822401 | Msa0387750:intron | 50.0% | |
| ACAGGGGGTAAAACCGGAAA+TGG | + | chr3_1:91822709-91822728 | None:intergenic | 50.0% | |
| TGCCACACCATGTTTCACAC+TGG | + | chr3_1:91823391-91823410 | None:intergenic | 50.0% | |
| ATTTCTCTCTTCGCCGGCGT+CGG | + | chr3_1:91816394-91816413 | None:intergenic | 55.0% | |
| ACCCGCATTTCTCTCTTCGC+CGG | + | chr3_1:91816400-91816419 | None:intergenic | 55.0% | |
| CGGTGCATGGTACACCGTTA+TGG | - | chr3_1:91816474-91816493 | Msa0387750:CDS | 55.0% | |
| GGGCAAGAGTTAGACTGCCA+TGG | - | chr3_1:91818745-91818764 | Msa0387750:intron | 55.0% | |
| ACTGCCATGGCATGGGTGAT+TGG | - | chr3_1:91818758-91818777 | Msa0387750:intron | 55.0% | |
| CTGCCATGGCATGGGTGATT+GGG | - | chr3_1:91818759-91818778 | Msa0387750:intron | 55.0% | |
| TGCCATGGCATGGGTGATTG+GGG | - | chr3_1:91818760-91818779 | Msa0387750:intron | 55.0% | |
| TTCCCCAATCACCCATGCCA+TGG | + | chr3_1:91818765-91818784 | None:intergenic | 55.0% | |
| CATGGTGGCAATGGTTGTGG+TGG | + | chr3_1:91818960-91818979 | None:intergenic | 55.0% | |
| GGACATGGTGGCAATGGTTG+TGG | + | chr3_1:91818963-91818982 | None:intergenic | 55.0% | |
| TGTCGTGGACATGGTGGCAA+TGG | + | chr3_1:91818969-91818988 | None:intergenic | 55.0% | |
| TCTAATGGCTCAGGTGAGCG+TGG | + | chr3_1:91819005-91819024 | None:intergenic | 55.0% | |
| GTGACATCCAGATGCGCACA+TGG | - | chr3_1:91819256-91819275 | Msa0387750:intron | 55.0% | |
| TAGGACGTCGCGCGTAATTG+TGG | - | chr3_1:91819516-91819535 | Msa0387750:intron | 55.0% | |
| ! | GCACTGGCAAGGTTTGTGTG+GGG | - | chr3_1:91819810-91819829 | Msa0387750:intron | 55.0% |
| CACTGGCAAGGTTTGTGTGG+GGG | - | chr3_1:91819811-91819830 | Msa0387750:intron | 55.0% | |
| TTGGCCCATGTAACCAGGAC+AGG | + | chr3_1:91820660-91820679 | None:intergenic | 55.0% | |
| ACGCGCCAAACGATCTGTTG+TGG | - | chr3_1:91821023-91821042 | Msa0387750:intron | 55.0% | |
| CGCGCCAAACGATCTGTTGT+GGG | - | chr3_1:91821024-91821043 | Msa0387750:intron | 55.0% | |
| GGCACCCACAACAGATCGTT+TGG | + | chr3_1:91821031-91821050 | None:intergenic | 55.0% | |
| GAACCAAGCTTGGCCTCTCA+AGG | + | chr3_1:91821416-91821435 | None:intergenic | 55.0% | |
| AGAGGCCAAGCTTGGTTCCT+AGG | - | chr3_1:91821418-91821437 | Msa0387750:intron | 55.0% | |
| AGTCAGCCCTGACGAAAGCA+TGG | - | chr3_1:91821677-91821696 | Msa0387750:intron | 55.0% | |
| GTGCAACATAATGGCACCCC+TGG | + | chr3_1:91821862-91821881 | None:intergenic | 55.0% | |
| GGCGGATCCAGTGTGAAACA+TGG | - | chr3_1:91823381-91823400 | Msa0387750:five_prime_UTR | 55.0% | |
| CGCCGGCGAAGAGAGAAATG+CGG | - | chr3_1:91816395-91816414 | Msa0387750:three_prime_UTR | 60.0% | |
| GCCGGCGAAGAGAGAAATGC+GGG | - | chr3_1:91816396-91816415 | Msa0387750:three_prime_UTR | 60.0% | |
| TCTGGCTGTCGTGGACATGG+TGG | + | chr3_1:91818975-91818994 | None:intergenic | 60.0% | |
| CACTCTGGCTGTCGTGGACA+TGG | + | chr3_1:91818978-91818997 | None:intergenic | 60.0% | |
| AATGGCTCAGGTGAGCGTGG+TGG | + | chr3_1:91819002-91819021 | None:intergenic | 60.0% | |
| TTACGCGCGACGTCCTAGCT+TGG | + | chr3_1:91819513-91819532 | None:intergenic | 60.0% | |
| TGGCAGAGCTCGCATCACTG+CGG | - | chr3_1:91819784-91819803 | Msa0387750:intron | 60.0% | |
| CGCATCACTGCGGAATGCAC+TGG | - | chr3_1:91819794-91819813 | Msa0387750:intron | 60.0% | |
| ! | CACTGCGGAATGCACTGGCA+AGG | - | chr3_1:91819799-91819818 | Msa0387750:intron | 60.0% |
| AAGGTTTGTGTGGGGGCCAC+AGG | - | chr3_1:91819818-91819837 | Msa0387750:intron | 60.0% | |
| TTGTGTGGGGGCCACAGGAT+CGG | - | chr3_1:91819823-91819842 | Msa0387750:intron | 60.0% | |
| GTGGGTGCCTGTTCTCCTGA+AGG | - | chr3_1:91821042-91821061 | Msa0387750:intron | 60.0% | |
| GCTTCTTGTGCAGCCGCACT+TGG | + | chr3_1:91823232-91823251 | None:intergenic | 60.0% | |
| GGTGGTCACTCTGGCTGTCG+TGG | + | chr3_1:91818984-91819003 | None:intergenic | 65.0% | |
| GGTGAGCGTGGTGGTCACTC+TGG | + | chr3_1:91818993-91819012 | None:intergenic | 65.0% | |
| GTTTGGCGCGTCGTCTTCCC+TGG | + | chr3_1:91821014-91821033 | None:intergenic | 65.0% | |
| GCGCGTCGTCTTCCCTGGAG+AGG | + | chr3_1:91821009-91821028 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 91816263 | 91823440 | 91816263 | ID=Msa0387750;Name=Msa0387750 |
| chr3_1 | mRNA | 91816263 | 91823440 | 91816263 | ID=Msa0387750-mRNA-1;Parent=Msa0387750;Name=Msa0387750-mRNA-1;_AED=0.13;_eAED=0.13;_QI=65|1|1|1|1|1|6|154|427 |
| chr3_1 | exon | 91816263 | 91816593 | 91816263 | ID=Msa0387750-mRNA-1:exon:25746;Parent=Msa0387750-mRNA-1 |
| chr3_1 | exon | 91817374 | 91817452 | 91817374 | ID=Msa0387750-mRNA-1:exon:25745;Parent=Msa0387750-mRNA-1 |
| chr3_1 | exon | 91817748 | 91818024 | 91817748 | ID=Msa0387750-mRNA-1:exon:25744;Parent=Msa0387750-mRNA-1 |
| chr3_1 | exon | 91818640 | 91818688 | 91818640 | ID=Msa0387750-mRNA-1:exon:25743;Parent=Msa0387750-mRNA-1 |
| chr3_1 | exon | 91818824 | 91819108 | 91818824 | ID=Msa0387750-mRNA-1:exon:25742;Parent=Msa0387750-mRNA-1 |
| chr3_1 | exon | 91822959 | 91823440 | 91822959 | ID=Msa0387750-mRNA-1:exon:25741;Parent=Msa0387750-mRNA-1 |
| chr3_1 | five_prime_UTR | 91823376 | 91823440 | 91823376 | ID=Msa0387750-mRNA-1:five_prime_utr;Parent=Msa0387750-mRNA-1 |
| chr3_1 | CDS | 91822959 | 91823375 | 91822959 | ID=Msa0387750-mRNA-1:cds;Parent=Msa0387750-mRNA-1 |
| chr3_1 | CDS | 91818824 | 91819108 | 91818824 | ID=Msa0387750-mRNA-1:cds;Parent=Msa0387750-mRNA-1 |
| chr3_1 | CDS | 91818640 | 91818688 | 91818640 | ID=Msa0387750-mRNA-1:cds;Parent=Msa0387750-mRNA-1 |
| chr3_1 | CDS | 91817748 | 91818024 | 91817748 | ID=Msa0387750-mRNA-1:cds;Parent=Msa0387750-mRNA-1 |
| chr3_1 | CDS | 91817374 | 91817452 | 91817374 | ID=Msa0387750-mRNA-1:cds;Parent=Msa0387750-mRNA-1 |
| chr3_1 | CDS | 91816417 | 91816593 | 91816417 | ID=Msa0387750-mRNA-1:cds;Parent=Msa0387750-mRNA-1 |
| chr3_1 | three_prime_UTR | 91816263 | 91816416 | 91816263 | ID=Msa0387750-mRNA-1:three_prime_utr;Parent=Msa0387750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
